ChimeraX Log

remotecontrol rest start port 8080 json true log true
remotecontrol rest start port 8080 json true log true
UCSF ChimeraX version: 1.12.dev202512030954 (2025-12-03)
© 2016-2025 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
REST server started on host 127.0.0.1 port 8080
Visit http://127.0.0.1:8080/cmdline.html for CLI interface
open 3syu
open 3syu
Summary of feedback from opening 3syu fetched from pdb
notes Fetching compressed mmCIF 3syu from http://files.rcsb.org/download/3syu.cif
Fetching CCD CGA from https://files.wwpdb.org/pub/pdb/refdata/chem_comp/A/CGA/CGA.cif

3syu title:
Re-refined coordinates for pdb entry 1det - ribonuclease T1 carboxymethylated at GLU 58 in complex with 2'GMP [more info...]

Chain information for 3syu #1
Chain Description UniProt
A Guanyl-specific ribonuclease T1 RNT1_ASPOR 1-104

Non-standard residues in 3syu #1
2GPguanosine-2'-monophosphate
NAsodium ion
UNXunknown atom or ion

9 atoms have alternate locations. Control/examine alternate locations with Altloc Explorer [start tool...] or the altlocs command.
1533 atoms have anisotropic B-factors. Depict anisotropic information with Thermal Ellipsoids [start tool...] or the aniso command.
close #1
close #1
open 9bq2
open 9bq2
9bq2 title:
Structure of the flotillin complex in a native membrane environment [more info...]

Chain information for 9bq2 #1
Chain Description UniProt
A Flotillin-2 J3QLD9_HUMAN 1-402
B Flotillin-1 FLOT1_HUMAN 1-422

9bq2 mmCIF Assemblies
1complete point assembly
2point asymmetric unit
3point asymmetric unit, std point frame

info
info
sym #1 assembly 1
sym #1 assembly 1
Made 22 graphical clones for 9bq2 assembly 1
info
info
hide #2
hide #2
surface #2
surface #2
color #2/A indian red
color #2/A indian red
color #2/B green
color #2/B green
show #2:cys@sg atoms
show #2:cys@sg atoms
color #2:cys@sg gold
color #2:cys@sg gold
set bgColor steel blue
set bgColor steel blue
camera ortho
camera ortho
lighting full
lighting full
set depthCue false
Expected a keyword
graphics depthCue false
Expected a keyword
lighting depthCue false
lighting depthCue false
view
view