SuperPose Version 1.0

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# Program:  needle
# Rundate:  Mon Apr 18 16:33:25 2005
# Align_format: srspair
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#=======================================
#
# Aligned_sequences: 2
# 1: 2MNR_model_default_chain_default
# 2: 4ENL_model_default_chain_default
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity:      88/474 (18.6%)
# Similarity:   150/474 (31.6%)
# Gaps:         155/474 (32.7%)
# Score: 39.0
# 
#
#=======================================

2MNR_model_de      1 EVLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLF     50
                               ||:...|..|:.:.|.    |.|.::|.|..||. .|.:.
4ENL_model_de      1           AVSKVYARSVYDSRGN----PTVEVELTTEKGVF-RSIVP     35

2MNR_model_de     51 AYTPVALKSLKQLLDD-----------MAAMIVNEPLAPVSLEAML----     85
                     :.....:....::.|.           .|...||:.:||..::|.:    
4ENL_model_de     36 SGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKANIDVSD     85

2MNR_model_de     86 ---AKRFCL-----AGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLGA    127
                        ...|.:     |..:.|...|..|:.:||..|.......||.|.|..
4ENL_model_de     86 QKAVDDFLISLDGTANKSKLGANAILGVSLAASRAAAAEKNVPLYKHLAD    135

2MNR_model_de    128 NAR--------PVQAYD-----SHSLDGVKLATER---AVTAAELGFRAV    161
                     .::        ||...:     ||:  |..||.:.   |.|.|:....|:
4ENL_model_de    136 LSKSKTSPYVLPVPFLNVLNGGSHA--GGALALQEFMIAPTGAKTFAEAL    183

2MNR_model_de    162 K------------TKIGYPA-----------------LDQDLAVVRSIRQ    182
                     :            ||..|.|                 .::.|.::....:
4ENL_model_de    184 RIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIK    233

2MNR_model_de    183 AVGDDFGIMV-----------DYNQSLDV--PAAIKRS------------    207
                     |.|.|..:.:           |....||.  |.:.|..            
4ENL_model_de    234 AAGHDGKVKIGLDCASSEFFKDGKYDLDFKNPNSDKSKWLTGPQLADLYH    283

2MNR_model_de    208 QALQQEGVTWIEEPTLQHDYE---------GHQRIQSKLNVPVQMGENWL    248
                     ..:::..:..||:|..:.|:|         |.|.:...|.|        .
4ENL_model_de    284 SLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDLTV--------T    325

2MNR_model_de    249 GPEEMFKALSIGACRLAMPDAMKIGGVTGWIRAS--ALAQQFGIPMSSHL    296
                     .|:.:..|:...|....:....:||.::..|:|:  :.|..:|: |.||.
4ENL_model_de    326 NPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWGV-MVSHR    374

2MNR_model_de    297 FQEISAHLLAATPTAHWLERLDLAGSVIEPTLTFEGGNAVIPDLPGVGII    346
                     ..|.....:|           ||...:....:. .|..|....|..:..:
4ENL_model_de    375 SGETEDTFIA-----------DLVVGLRTGQIK-TGAPARSERLAKLNQL    412

2MNR_model_de    347 WR-EKEIGKYLV                357
                     .| |:|:|...|            
4ENL_model_de    413 LRIEEELGDNAVFAGENFHHGDKL    436


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SuperPose Output Images

SuperPose Output Text Files

Problems? Questions? Suggestions? Contact Raj Maiti or David Wishart

SuperPose v1.0 (2004) Rajarshi Maiti, Gary Van Domselaar, Haiyan Zhang, and David Wishart