| 1 | init start
|
|---|
| 2 | init preamble 6.198883056640625e-05
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| 3 | setup SSL certificates 0.11030316352844238
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| 4 | parse args 0.37788915634155273
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| 5 | init ssl cert dir 0.7268249988555908
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| 6 | app dirs 0.728783130645752
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| 7 | init ses 0.7590470314025879
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| 8 | init settings 0.7674219608306885
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| 9 | reg commands 0.786614179611206
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| 10 | init Qt 0.8991560935974121
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| 11 | UI settings: 0.0017383098602294922
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| 12 | UI import web engine: 0.6465251445770264
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| 13 | UI init QApplication: 1.0297162532806396
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| 14 | UI high DPI: 1.0297720432281494
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| 15 | UI redirect Qt messages: 1.0297980308532715
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| 16 | UI finished: 1.0298540592193604
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| 17 | init UI 1.9290871620178223
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| 18 | splash setup 2.355509042739868
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| 19 | toolshed.restart_action_info() 2.3556010723114014
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| 20 | toolshed handle restart file 2.356015205383301
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| 21 | toolshed URL 2.3560380935668945
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| 22 | toolshed constructor: preamble: 0.0004520416259765625
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| 23 | toolshed constructor: init from cache: 0.18851995468139648
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| 24 | toolshed constructor: reload: 0.22525596618652344
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| 25 | toolshed constructor: async cache update (finished): 0.2391340732574463
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| 26 | toolshed init 2.5952231884002686
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| 27 | toolshed get toolshed 2.595264196395874
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| 28 | bootstrap: preamble: 0.0032868385314941406
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| 29 | init managers: preamble: 1.1920928955078125e-06
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| 30 | init managers: init Arrays: 2.7179718017578125e-05
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| 31 | init managers: init Core: 3.814697265625e-05
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| 32 | init managers: init ToolshedUtils: 5.316734313964844e-05
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| 33 | init managers: init RotamerLibMgr: 0.009394168853759766
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| 34 | init managers: init WebServices: 0.009434223175048828
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| 35 | init managers: init Movie: 0.00944209098815918
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| 36 | resumed SEQCROW queue
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| 37 | init managers: init SEQCROW: 2.205515146255493
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| 38 | init managers: init AmberInfo: 2.2055323123931885
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| 39 | init managers: init SmoothLines: 2.2055392265319824
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| 40 | init managers: init ExperimentalCommands: 2.20554518699646
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| 41 | init managers: init ListInfo: 2.2055611610412598
|
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| 42 | init managers: init Segment: 2.2055671215057373
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| 43 | init managers: init PresetMgr: 2.221004009246826
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| 44 | init managers: init RestServer: 2.221029281616211
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| 45 | init managers: init IO: 2.2210371494293213
|
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| 46 | init managers: init Test: 2.221043348312378
|
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| 47 | init managers: init SchemeMgr: 2.2379331588745117
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| 48 | init managers: init AtomicLibrary: 2.2379562854766846
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| 49 | init managers: init RemoteControl: 2.237964153289795
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| 50 | init managers: init Geometry: 2.237969160079956
|
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| 51 | init managers: init DataFormats: 2.2434961795806885
|
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| 52 | init managers: init Crystal: 2.2435200214385986
|
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| 53 | init managers: init Dssp: 2.243528366088867
|
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| 54 | init managers: init AtomSearchLibrary: 2.2435340881347656
|
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| 55 | init managers: init RotamerLibsRichardson: 2.2435402870178223
|
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| 56 | init managers: init Struts: 2.2435462474823
|
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| 57 | init managers: init Shape: 2.243551254272461
|
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| 58 | init managers: init RotamerLibsDynameomics: 2.243556261062622
|
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| 59 | init managers: init SpaceNavigator: 2.2435619831085205
|
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| 60 | init managers: init Graphics: 2.2435672283172607
|
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| 61 | init managers: init IMOD: 2.2435731887817383
|
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| 62 | init managers: init RotamerLibsDunbrack: 2.2435781955718994
|
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| 63 | init managers: init WebCam: 2.2435829639434814
|
|---|
| 64 | init managers: init MapData: 2.2435882091522217
|
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| 65 | init managers: init MouseModes: 2.243594169616699
|
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| 66 | init managers: init AtomSearch: 2.2435991764068604
|
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| 67 | init managers: init LookingGlass: 2.2436044216156006
|
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| 68 | init managers: init Vive: 2.243610143661499
|
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| 69 | init managers: init ConnectStructure: 2.2436153888702393
|
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| 70 | init managers: init UI: 2.2436201572418213
|
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| 71 | init managers: init EMDB-SFF: 2.2436254024505615
|
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| 72 | init managers: init MLP: 2.24363112449646
|
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| 73 | init managers: init Meeting: 2.2436363697052
|
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| 74 | init managers: init DistUI: 2.2436411380767822
|
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| 75 | init managers: init MedicalToolbar: 2.2436470985412598
|
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| 76 | init managers: init Tug: 2.243652105331421
|
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| 77 | init managers: init BugReporter: 2.243657350540161
|
|---|
| 78 | init managers: init SaveCommand: 2.5823981761932373
|
|---|
| 79 | init managers: init PickBlobs: 2.582425117492676
|
|---|
| 80 | init managers: init BasicActions: 2.5824332237243652
|
|---|
| 81 | init managers: init ResidueFit: 2.5824391841888428
|
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| 82 | init managers: init FunctionKey: 2.582444190979004
|
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| 83 | init managers: init Contacts: 2.5824501514434814
|
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| 84 | init managers: init CommandLine: 2.5824551582336426
|
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| 85 | init managers: init Log: 2.5824601650238037
|
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| 86 | init managers: init MapEraser: 2.5824661254882812
|
|---|
| 87 | init managers: init Registration: 2.5824711322784424
|
|---|
| 88 | init managers: init FileHistory: 2.58247709274292
|
|---|
| 89 | init managers: init VolumeMenu: 2.5824832916259766
|
|---|
| 90 | init managers: init SideView: 2.5824880599975586
|
|---|
| 91 | init managers: init OpenCommand: 2.585524320602417
|
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| 92 | init managers: init ButtonPanel: 2.585541248321533
|
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| 93 | init managers: init ModelSeries: 2.585548162460327
|
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| 94 | init managers: init Shell: 2.585554361343384
|
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| 95 | init managers: init Label: 2.5855600833892822
|
|---|
| 96 | init managers: init BondRot: 2.585566282272339
|
|---|
| 97 | init managers: init Positions: 2.585571050643921
|
|---|
| 98 | init managers: init Help: 2.585576295852661
|
|---|
| 99 | init managers: init Neuron: 2.585581064224243
|
|---|
| 100 | init managers: init ImageFormats: 2.5855863094329834
|
|---|
| 101 | init managers: init ColorGlobe: 2.5855910778045654
|
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| 102 | init managers: init gltf: 2.585597276687622
|
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| 103 | init managers: init STL: 2.5856010913848877
|
|---|
| 104 | init managers: init VTK: 2.5856072902679443
|
|---|
| 105 | init managers: init CellPack: 2.5856120586395264
|
|---|
| 106 | init managers: init Dicom: 2.5856173038482666
|
|---|
| 107 | init managers: init Storm: 2.5856220722198486
|
|---|
| 108 | init managers: init Crosslinks: 2.585627317428589
|
|---|
| 109 | init managers: init ColorKey: 2.585632085800171
|
|---|
| 110 | init managers: init SDF: 2.585637092590332
|
|---|
| 111 | init managers: init CoreFormats: 2.585642099380493
|
|---|
| 112 | init managers: init WavefrontOBJ: 2.58564829826355
|
|---|
| 113 | init managers: init ColorActions: 2.585653066635132
|
|---|
| 114 | init managers: init Centroids: 2.5856571197509766
|
|---|
| 115 | init managers: init Mol2: 2.585663080215454
|
|---|
| 116 | init managers: init Zone: 2.5856680870056152
|
|---|
| 117 | init managers: init mmCIF: 2.5856733322143555
|
|---|
| 118 | init managers: init StdCommands: 2.5856781005859375
|
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| 119 | init managers: init RNALayout: 2.5856833457946777
|
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| 120 | init managers: init AlignmentAlgorithms: 2.585689067840576
|
|---|
| 121 | init managers: init ModelPanel: 2.5856943130493164
|
|---|
| 122 | init managers: init PubChem: 2.5856990814208984
|
|---|
| 123 | init managers: init Clashes: 2.5857043266296387
|
|---|
| 124 | init managers: init Smiles: 2.5857090950012207
|
|---|
| 125 | init managers: init uniprot: 2.5857152938842773
|
|---|
| 126 | init managers: init PDBLibrary: 2.5857200622558594
|
|---|
| 127 | init managers: init Map: 2.5857253074645996
|
|---|
| 128 | init managers: init Shortcuts: 2.5857300758361816
|
|---|
| 129 | init managers: init SeqView: 2.585735321044922
|
|---|
| 130 | init managers: init Markers: 2.585740089416504
|
|---|
| 131 | init managers: init MapFilter: 2.585745334625244
|
|---|
| 132 | init managers: init AddCharge: 2.5857510566711426
|
|---|
| 133 | init managers: init SwapRes: 2.585756301879883
|
|---|
| 134 | init managers: init ViewDockX: 2.585761070251465
|
|---|
| 135 | init managers: init PDB: 2.585766315460205
|
|---|
| 136 | init managers: init Clipper: 2.585771083831787
|
|---|
| 137 | init managers: init SwapAA: 2.5857763290405273
|
|---|
| 138 | init managers: init Surface: 2.5857810974121094
|
|---|
| 139 | init managers: init AxesPlanes: 2.5857861042022705
|
|---|
| 140 | init managers: init MatchMaker: 2.5857911109924316
|
|---|
| 141 | init managers: init Morph: 2.5857973098754883
|
|---|
| 142 | init managers: init Atomic: 2.5858092308044434
|
|---|
| 143 | init managers: init Mask: 2.585815191268921
|
|---|
| 144 | init managers: init Alignments: 2.5904932022094727
|
|---|
| 145 | init managers: init ShowSequences: 2.590517997741699
|
|---|
| 146 | init managers: init MapFit: 2.5905263423919678
|
|---|
| 147 | init managers: init coulombic: 2.590532064437866
|
|---|
| 148 | init managers: init Bumps: 2.5905373096466064
|
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| 149 | init managers: init BlastProtein: 2.590543270111084
|
|---|
| 150 | init managers: init MapSeries: 2.590548276901245
|
|---|
| 151 | init managers: init Modeller: 2.5905532836914062
|
|---|
| 152 | init managers: init Segger: 2.590559244155884
|
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| 153 | init managers: init BILD: 2.590564250946045
|
|---|
| 154 | init managers: init Maestro: 2.590569257736206
|
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| 155 | init managers: init TapeMeasure: 2.590574264526367
|
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| 156 | init managers: init StrudelScore: 2.5905792713165283
|
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| 157 | init managers: init MDcrds: 2.5905840396881104
|
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| 158 | init managers: init AlignmentMatrices: 2.590590238571167
|
|---|
| 159 | init managers: init AlignmentHdrs: 2.590595245361328
|
|---|
| 160 | init managers: init HKCage: 2.5906002521514893
|
|---|
| 161 | init managers: init Toolbar: 2.6174232959747314
|
|---|
| 162 | init managers: init Nucleotides: 2.617464065551758
|
|---|
| 163 | init managers: init CageBuilder: 2.6174721717834473
|
|---|
| 164 | init managers: init Hbonds: 2.6174793243408203
|
|---|
| 165 | init managers: init IHM: 2.6174862384796143
|
|---|
| 166 | init managers: init AddH: 2.617492198944092
|
|---|
| 167 | init managers: init ChemGroup: 2.617497205734253
|
|---|
| 168 | init managers: init PDBBio: 2.617502212524414
|
|---|
| 169 | init managers: init ReadPbonds: 2.6175081729888916
|
|---|
| 170 | init managers: init MMTF: 2.6175131797790527
|
|---|
| 171 | init managers: init DistMonitor: 2.6175191402435303
|
|---|
| 172 | init managers: init BuildStructure: 2.6175360679626465
|
|---|
| 173 | init managers: init ISOLDE: 2.6175432205200195
|
|---|
| 174 | init managers: init ShowAttr: 2.6175482273101807
|
|---|
| 175 | init managers: finished: 2.617553234100342
|
|---|
| 176 | bootstrap: init managers: 2.6208667755126953
|
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| 177 | init custom: preamble: 7.152557373046875e-07
|
|---|
| 178 | init custom: init Arrays: 1.5974044799804688e-05
|
|---|
| 179 | init custom: init Core: 2.288818359375e-05
|
|---|
| 180 | init custom: init ToolshedUtils: 0.04533886909484863
|
|---|
| 181 | init custom: init RotamerLibMgr: 0.04536581039428711
|
|---|
| 182 | init custom: init WebServices: 0.04537391662597656
|
|---|
| 183 | init custom: init Movie: 0.0453798770904541
|
|---|
| 184 | init custom: init SEQCROW: 0.08130383491516113
|
|---|
| 185 | init custom: init AmberInfo: 0.0813441276550293
|
|---|
| 186 | init custom: init SmoothLines: 0.08135294914245605
|
|---|
| 187 | init custom: init ExperimentalCommands: 0.0813589096069336
|
|---|
| 188 | init custom: init ListInfo: 0.08136677742004395
|
|---|
| 189 | init custom: init Segment: 0.08137297630310059
|
|---|
| 190 | init custom: init PresetMgr: 0.08137774467468262
|
|---|
| 191 | init custom: init RestServer: 0.09890007972717285
|
|---|
| 192 | init custom: init IO: 0.09892892837524414
|
|---|
| 193 | init custom: init Test: 0.09893679618835449
|
|---|
| 194 | init custom: init SchemeMgr: 0.09894394874572754
|
|---|
| 195 | init custom: init AtomicLibrary: 0.09895086288452148
|
|---|
| 196 | init custom: init RemoteControl: 0.09895896911621094
|
|---|
| 197 | init custom: init Geometry: 0.09896588325500488
|
|---|
| 198 | init custom: init DataFormats: 0.09897184371948242
|
|---|
| 199 | init custom: init Crystal: 0.09897780418395996
|
|---|
| 200 | init custom: init Dssp: 0.0989840030670166
|
|---|
| 201 | init custom: init AtomSearchLibrary: 0.09898972511291504
|
|---|
| 202 | init custom: init RotamerLibsRichardson: 0.09899592399597168
|
|---|
| 203 | init custom: init Struts: 0.09900188446044922
|
|---|
| 204 | init custom: init Shape: 0.09900879859924316
|
|---|
| 205 | init custom: init RotamerLibsDynameomics: 0.0990149974822998
|
|---|
| 206 | init custom: init SpaceNavigator: 0.09902191162109375
|
|---|
| 207 | init custom: init Graphics: 0.09902787208557129
|
|---|
| 208 | init custom: init IMOD: 0.09903383255004883
|
|---|
| 209 | init custom: init RotamerLibsDunbrack: 0.09903979301452637
|
|---|
| 210 | init custom: init WebCam: 0.09904599189758301
|
|---|
| 211 | init custom: init MapData: 0.09905171394348145
|
|---|
| 212 | init custom: init MouseModes: 0.11638092994689941
|
|---|
| 213 | init custom: init AtomSearch: 0.11640572547912598
|
|---|
| 214 | init custom: init LookingGlass: 0.11641407012939453
|
|---|
| 215 | init custom: init Vive: 0.11705875396728516
|
|---|
| 216 | init custom: init ConnectStructure: 0.11709976196289062
|
|---|
| 217 | init custom: init UI: 0.11710786819458008
|
|---|
| 218 | init custom: init EMDB-SFF: 0.11711478233337402
|
|---|
| 219 | init custom: init MLP: 0.11712074279785156
|
|---|
| 220 | init custom: init Meeting: 0.1171259880065918
|
|---|
| 221 | init custom: init DistUI: 0.1302800178527832
|
|---|
| 222 | init custom: init MedicalToolbar: 0.13031291961669922
|
|---|
| 223 | init custom: init Tug: 0.13265085220336914
|
|---|
| 224 | init custom: init BugReporter: 0.1381697654724121
|
|---|
| 225 | init custom: init SaveCommand: 0.13819193840026855
|
|---|
| 226 | init custom: init PickBlobs: 0.1469898223876953
|
|---|
| 227 | init custom: init BasicActions: 0.14860868453979492
|
|---|
| 228 | init custom: init ResidueFit: 0.1486339569091797
|
|---|
| 229 | init custom: init FunctionKey: 0.1491847038269043
|
|---|
| 230 | init custom: init Contacts: 0.14920568466186523
|
|---|
| 231 | init custom: init CommandLine: 0.15119075775146484
|
|---|
| 232 | init custom: init Log: 0.15292692184448242
|
|---|
| 233 | init custom: init MapEraser: 0.15434670448303223
|
|---|
| 234 | init custom: init Registration: 0.15619897842407227
|
|---|
| 235 | init custom: init FileHistory: 0.15622878074645996
|
|---|
| 236 | init custom: init VolumeMenu: 0.15773391723632812
|
|---|
| 237 | init custom: init SideView: 0.15776681900024414
|
|---|
| 238 | init custom: init OpenCommand: 0.1577749252319336
|
|---|
| 239 | init custom: init ButtonPanel: 0.15778183937072754
|
|---|
| 240 | init custom: init ModelSeries: 0.15778684616088867
|
|---|
| 241 | init custom: init Shell: 0.1577928066253662
|
|---|
| 242 | init custom: init Label: 0.16128182411193848
|
|---|
| 243 | init custom: init BondRot: 0.16319894790649414
|
|---|
| 244 | init custom: init Positions: 0.16321992874145508
|
|---|
| 245 | init custom: init Help: 0.16437792778015137
|
|---|
| 246 | init custom: init Neuron: 0.1643979549407959
|
|---|
| 247 | init custom: init ImageFormats: 0.16440582275390625
|
|---|
| 248 | init custom: init ColorGlobe: 0.1644120216369629
|
|---|
| 249 | init custom: init gltf: 0.16441774368286133
|
|---|
| 250 | init custom: init STL: 0.16442298889160156
|
|---|
| 251 | init custom: init VTK: 0.1644277572631836
|
|---|
| 252 | init custom: init CellPack: 0.16443300247192383
|
|---|
| 253 | init custom: init Dicom: 0.20024681091308594
|
|---|
| 254 | init custom: init Storm: 0.200272798538208
|
|---|
| 255 | init custom: init Crosslinks: 0.20028185844421387
|
|---|
| 256 | init custom: init ColorKey: 0.2002878189086914
|
|---|
| 257 | init custom: init SDF: 0.20029282569885254
|
|---|
| 258 | init custom: init CoreFormats: 0.20029878616333008
|
|---|
| 259 | init custom: init WavefrontOBJ: 0.2003037929534912
|
|---|
| 260 | init custom: init ColorActions: 0.20030975341796875
|
|---|
| 261 | init custom: init Centroids: 0.20031499862670898
|
|---|
| 262 | init custom: init Mol2: 0.20032072067260742
|
|---|
| 263 | init custom: init Zone: 0.20226788520812988
|
|---|
| 264 | init custom: init mmCIF: 0.20228791236877441
|
|---|
| 265 | init custom: init StdCommands: 0.24730300903320312
|
|---|
| 266 | init custom: init RNALayout: 0.2473287582397461
|
|---|
| 267 | init custom: init AlignmentAlgorithms: 0.24733686447143555
|
|---|
| 268 | init custom: init ModelPanel: 0.24734282493591309
|
|---|
| 269 | init custom: init PubChem: 0.24734902381896973
|
|---|
| 270 | init custom: init Clashes: 0.24735379219055176
|
|---|
| 271 | init custom: init Smiles: 0.2473599910736084
|
|---|
| 272 | init custom: init uniprot: 0.24736475944519043
|
|---|
| 273 | init custom: init PDBLibrary: 0.24737071990966797
|
|---|
| 274 | init custom: init Map: 0.2485969066619873
|
|---|
| 275 | init custom: init Shortcuts: 0.2486269474029541
|
|---|
| 276 | init custom: init SeqView: 0.24863481521606445
|
|---|
| 277 | init custom: init Markers: 0.251802921295166
|
|---|
| 278 | init custom: init MapFilter: 0.25182485580444336
|
|---|
| 279 | init custom: init AddCharge: 0.2518329620361328
|
|---|
| 280 | init custom: init SwapRes: 0.2714099884033203
|
|---|
| 281 | init custom: init ViewDockX: 0.28687381744384766
|
|---|
| 282 | init custom: init PDB: 0.28690099716186523
|
|---|
| 283 | init custom: init Clipper: 0.2869088649749756
|
|---|
| 284 | init custom: init SwapAA: 0.2883470058441162
|
|---|
| 285 | init custom: init Surface: 0.3238499164581299
|
|---|
| 286 | init custom: init AxesPlanes: 0.3238847255706787
|
|---|
| 287 | init custom: init MatchMaker: 0.32389307022094727
|
|---|
| 288 | init custom: init Morph: 0.32390785217285156
|
|---|
| 289 | init custom: init Atomic: 0.3415250778198242
|
|---|
| 290 | init custom: init Mask: 0.3415548801422119
|
|---|
| 291 | init custom: init Alignments: 0.3415639400482178
|
|---|
| 292 | init custom: init ShowSequences: 0.3415708541870117
|
|---|
| 293 | init custom: init MapFit: 0.34157800674438477
|
|---|
| 294 | init custom: init coulombic: 0.3415849208831787
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| 295 | init custom: init Bumps: 0.34159088134765625
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| 296 | init custom: init BlastProtein: 0.3415980339050293
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| 297 | init custom: init MapSeries: 0.34499382972717285
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| 298 | init custom: init Modeller: 0.3450179100036621
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| 299 | init custom: init Segger: 0.34502577781677246
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| 300 | init custom: init BILD: 0.3450319766998291
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| 301 | init custom: init Maestro: 0.34503793716430664
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| 302 | init custom: init TapeMeasure: 0.3462979793548584
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| 303 | init custom: init StrudelScore: 0.34631991386413574
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| 304 | init custom: init MDcrds: 0.3463277816772461
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| 305 | init custom: init AlignmentMatrices: 0.34633398056030273
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| 306 | init custom: init AlignmentHdrs: 0.34633874893188477
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| 307 | init custom: init HKCage: 0.3463449478149414
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| 308 | init custom: init Toolbar: 0.34634995460510254
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| 309 | init custom: init Nucleotides: 0.3463559150695801
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| 310 | init custom: init CageBuilder: 0.3463609218597412
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|---|
| 311 | init custom: init Hbonds: 0.34636592864990234
|
|---|
| 312 | init custom: init IHM: 0.3463718891143799
|
|---|
| 313 | init custom: init AddH: 0.346376895904541
|
|---|
| 314 | init custom: init ChemGroup: 0.34926891326904297
|
|---|
| 315 | init custom: init PDBBio: 0.3492908477783203
|
|---|
| 316 | init custom: init ReadPbonds: 0.34929800033569336
|
|---|
| 317 | init custom: init MMTF: 0.3493049144744873
|
|---|
| 318 | init custom: init DistMonitor: 0.35250091552734375
|
|---|
| 319 | init custom: init BuildStructure: 0.3525209426879883
|
|---|
| 320 | init custom: init ISOLDE: 0.7869777679443359
|
|---|
| 321 | init custom: init ShowAttr: 0.7870180606842041
|
|---|
| 322 | init custom: finished: 0.787024974822998
|
|---|
| 323 | bootstrap: custom inits: 3.4079067707061768
|
|---|
| 324 | bootstrap: finished: 3.4079220294952393
|
|---|
| 325 | toolshed boostrap bundles 6.017988920211792
|
|---|
| 326 | start Tools manager 6.018044948577881
|
|---|
| 327 | start Tasks manager 6.0180981159210205
|
|---|
| 328 | start Undo manager 6.019022226333618
|
|---|
| 329 | toolshed full init 6.019037961959839
|
|---|
| 330 | Unable to load numpy_formathandler accelerator from OpenGL_accelerate
|
|---|
| 331 | build UI 7.810940980911255
|
|---|
| 332 | misc opts 8.54642105102539
|
|---|
| 333 | close splash 8.546457290649414
|
|---|
| 334 | log version 8.546746969223022
|
|---|
| 335 | start redraw 8.572692155838013
|
|---|
| 336 | init 'done': 8.573312044143677
|
|---|
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