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Ticket #7899: logs (8).txt

File logs (8).txt, 7.5 KB (added by kristen.browne@…, 3 years ago)
Added by email2trac

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1	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) ``
2	27 October 2022,09:44:03 prefect.ShellTask INFO
3	27 October 2022,09:44:03 prefect.ShellTask INFO
4	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
5	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) Info: Finished reading file (/tmp/tmp25n7akaq/ante.in.mol2); atoms read (160), bonds read (167).
6	27 October 2022,09:44:03 prefect.ShellTask INFO INFO:
7	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) `Info: Finished reading file
8	27 October 2022,09:44:03 prefect.ShellTask INFO (/tmp/tmp25n7akaq/ante.in.mol2); atoms read (160), bonds read (167).`
9	27 October 2022,09:44:03 prefect.ShellTask INFO
10	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
11	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) `Info: Finished reading file
12	27 October 2022,09:44:03 prefect.ShellTask INFO (/tmp/tmp25n7akaq/ante.in.mol2); atoms read (160), bonds read (167).`
13	27 October 2022,09:44:03 prefect.ShellTask INFO
14	27 October 2022,09:44:03 prefect.ShellTask INFO
15	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
16	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) Info: Determining atomic numbers from atomic symbols which are case sensitive.
17	27 October 2022,09:44:03 prefect.ShellTask INFO INFO:
18	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) `Info: Determining atomic numbers from atomic
19	27 October 2022,09:44:03 prefect.ShellTask INFO symbols which are case sensitive.`
20	27 October 2022,09:44:03 prefect.ShellTask INFO
21	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
22	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) `Info: Determining atomic numbers from atomic
23	27 October 2022,09:44:03 prefect.ShellTask INFO symbols which are case sensitive.`
24	27 October 2022,09:44:03 prefect.ShellTask INFO
25	27 October 2022,09:44:03 prefect.ShellTask INFO
26	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
27	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) Running: /usr/lib/ucsf-chimerax/bin/amber20/bin/bondtype -j part -i ANTECHAMBER_BOND_TYPE.AC0 -o ANTECHAMBER_BOND_TYPE.AC -f ac
28	27 October 2022,09:44:03 prefect.ShellTask INFO INFO:
29	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) `Running: /usr/lib/ucsf-
30	27 October 2022,09:44:03 prefect.ShellTask INFO chimerax/bin/amber20/bin/bondtype -j part -i ANTECHAMBER_BOND_TYPE.AC0 -o
31	27 October 2022,09:44:03 prefect.ShellTask INFO ANTECHAMBER_BOND_TYPE.AC -f ac`
32	27 October 2022,09:44:03 prefect.ShellTask INFO
33	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
34	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) `Running: /usr/lib/ucsf-
35	27 October 2022,09:44:03 prefect.ShellTask INFO chimerax/bin/amber20/bin/bondtype -j part -i ANTECHAMBER_BOND_TYPE.AC0 -o
36	27 October 2022,09:44:03 prefect.ShellTask INFO ANTECHAMBER_BOND_TYPE.AC -f ac`
37	27 October 2022,09:44:03 prefect.ShellTask INFO
38	27 October 2022,09:44:03 prefect.ShellTask INFO
39	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
40	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG)
41	27 October 2022,09:44:03 prefect.ShellTask INFO INFO:
42	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) ``
43	27 October 2022,09:44:03 prefect.ShellTask INFO
44	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
45	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) ``
46	27 October 2022,09:44:03 prefect.ShellTask INFO
47	27 October 2022,09:44:03 prefect.ShellTask INFO
48	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
49	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG)
50	27 October 2022,09:44:03 prefect.ShellTask INFO INFO:
51	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) ``
52	27 October 2022,09:44:03 prefect.ShellTask INFO
53	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
54	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) ``
55	27 October 2022,09:44:03 prefect.ShellTask INFO
56	27 October 2022,09:44:03 prefect.ShellTask INFO
57	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
58	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) Running: /usr/lib/ucsf-chimerax/bin/amber20/bin/atomtype -i ANTECHAMBER_AC.AC0 -o ANTECHAMBER_AC.AC -p gaff
59	27 October 2022,09:44:03 prefect.ShellTask INFO INFO:
60	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) `Running: /usr/lib/ucsf-
61	27 October 2022,09:44:03 prefect.ShellTask INFO chimerax/bin/amber20/bin/atomtype -i ANTECHAMBER_AC.AC0 -o ANTECHAMBER_AC.AC
62	27 October 2022,09:44:03 prefect.ShellTask INFO -p gaff`
63	27 October 2022,09:44:03 prefect.ShellTask INFO
64	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
65	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) `Running: /usr/lib/ucsf-
66	27 October 2022,09:44:03 prefect.ShellTask INFO chimerax/bin/amber20/bin/atomtype -i ANTECHAMBER_AC.AC0 -o ANTECHAMBER_AC.AC
67	27 October 2022,09:44:03 prefect.ShellTask INFO -p gaff`
68	27 October 2022,09:44:03 prefect.ShellTask INFO
69	27 October 2022,09:44:03 prefect.ShellTask INFO
70	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
71	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) Info: Total number of electrons: 686; net charge: 0
72	27 October 2022,09:44:03 prefect.ShellTask INFO INFO:
73	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) `Info: Total number of electrons: 686; net
74	27 October 2022,09:44:03 prefect.ShellTask INFO charge: 0`
75	27 October 2022,09:44:03 prefect.ShellTask INFO
76	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
77	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) `Info: Total number of electrons: 686; net
78	27 October 2022,09:44:03 prefect.ShellTask INFO charge: 0`
79	27 October 2022,09:44:03 prefect.ShellTask INFO
80	27 October 2022,09:44:03 prefect.ShellTask INFO
81	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
82	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG)
83	27 October 2022,09:44:03 prefect.ShellTask INFO INFO:
84	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) ``
85	27 October 2022,09:44:03 prefect.ShellTask INFO
86	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
87	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) ``
88	27 October 2022,09:44:03 prefect.ShellTask INFO
89	27 October 2022,09:44:03 prefect.ShellTask INFO
90	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
91	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) Running: /usr/lib/ucsf-chimerax/bin/amber20/bin/sqm -O -i sqm.in -o sqm.out
92	27 October 2022,09:44:03 prefect.ShellTask INFO INFO:
93	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) `Running: /usr/lib/ucsf-
94	27 October 2022,09:44:03 prefect.ShellTask INFO chimerax/bin/amber20/bin/sqm -O -i sqm.in -o sqm.out`
95	27 October 2022,09:44:03 prefect.ShellTask INFO
96	27 October 2022,09:44:03 prefect.ShellTask INFO STATUS:
97	27 October 2022,09:44:03 prefect.ShellTask INFO (MLU+OMZ+GHP+BGC+GHP+OMY+3FG) `Running: /usr/lib/ucsf-
98	27 October 2022,09:44:03 prefect.ShellTask INFO chimerax/bin/amber20/bin/sqm -O -i sqm.in -o sqm.out`
99	27 October 2022,09:44:03 prefect.ShellTask INFO
100	27 October 2022,09:44:03 prefect.ShellTask INFO

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