import urllib import tempfile from chimera import runCommand tmpDirectory = tempfile.mkdtemp() urllib.urlretrieve ("http://www.swissdock.ch/files/tmp/swissdockd_4XoPmK_TKSF3JFR2EHS9GLJAV0K/clusters.dock4.pdb", "%s/clusters.dock4.pdb"%tmpDirectory) runCommand("viewdock %s/clusters.dock4.pdb \"Dock 4, 5 or 6\""%tmpDirectory) color byatom #0 ribbon #0 repr stick :LIG ~disp element.H hbonds intramodel false lineWidth 5 color green