id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
10088	color by conservation problem	elzbieta.wator@…	Eric Pettersen	"{{{
Hi,
I am trying to color my protein structure by conservation. I prepared alignement file i fasta format and when I upload it to the ChimeraX and use command: color byattribute seq_conservation palette cyanmaroon not the whole structure of my proteins get coloured. Namely despite no mismatch in the PDB file and sequence which is first in aln file there are several residues which stays in the previously selected colour. I've already made sure that the sequence is correct and I have no further ideas how to solve this problems.
I will be very grateful for your tips.

Best,

Ela Wator
 [cid:e1499547-d8cf-48a6-89cb-b2ea6e696097]

}}}

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"	defect	closed	normal		Sequence		duplicate						all	ChimeraX