Changes between Initial Version and Version 1 of Ticket #15131


Ignore:
Timestamp:
May 7, 2024, 6:00:44 PM (19 months ago)
Author:
Greg Couch
Comment:

From Chris Caffalette <ccaffalett@…>:

I solved the original problem after further reviewing the ambientIntensity setting, I have found a range of ambientIntensity values that best aligns the color of the model with the color of the key to give an accurate visual representation of the key's colors. I apologize for the inconvenience!

Best, Chris Caffalette

Legend:

Unmodified
Added
Removed
Modified

  • Ticket #15131

    • Property Platform → all
    • Property Project → ChimeraX
    • Property Resolution → fixed
    • Property Status new → closed

  • Ticket #15131 – Description

    initial v1  
    55Description
    66When I use Tools>Depiction>Render by Attribute, and I choose the default reds-3, a different color is being used for the lowest threshold. By default, the lowest reds-3 threshold color is #FEE0D2. However, the lowest data values set with the setattr command are colored #FFFFF4. To illustrate this, I chose reds-3 and then changed the middle and high threshold to #FEE0D2. However, you can see in the image the models are colored with #FFFFF4 for all residues even though the color key is all #FEE0D2. Is there an operation that changes the color between what is set in the threshold/color key and what color is applied to the residues?
    7 
    8 Log:
    9 UCSF ChimeraX version: 1.7.1 (2024-01-23) 
    10 © 2016-2023 Regents of the University of California. All rights reserved. 
    11 
    12 > surface cap false
    13 
    14 Log from Mon May 6 14:47:47 2024UCSF ChimeraX version: 1.7.1 (2024-01-23) 
    15 © 2016-2023 Regents of the University of California. All rights reserved. 
    16 
    17 > surface cap false
    18 
    19 Log from Mon May 6 12:50:15 2024UCSF ChimeraX version: 1.7.1 (2024-01-23) 
    20 © 2016-2023 Regents of the University of California. All rights reserved. 
    21 
    22 > surface cap false
    23 
    24 Log from Mon May 6 12:18:50 2024 Startup Messages 
    25 --- 
    26 warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR
    27 bundle with that from NMRSTAR bundle 
    28  
    29 UCSF ChimeraX version: 1.7.1 (2024-01-23) 
    30 © 2016-2023 Regents of the University of California. All rights reserved. 
    31 How to cite UCSF ChimeraX 
    32 
    33 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    34 > JH/2024_0318_Crm1-ppx-
    35 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/npc2018-master/results/PDB_files/3spokes-C3/rebuilt_and_beads_042824/1_Cytoplasm.pdb"
    36 
    37 Chain information for 1_Cytoplasm.pdb #1 
    38 --- 
    39 Chain | Description 
    40 A B C D E F | No description available 
    41 G H K L O P | No description available 
    42 J N R | No description available 
    43  
    44 
    45 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    46 > JH/2024_0318_Crm1-ppx-
    47 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/npc2018-master/results/PDB_files/3spokes-C3/rebuilt_and_beads_042824/2_Inner_ring_rebuilt.pdb"
    48 
    49 Summary of feedback from opening /Users/chris/Library/CloudStorage/OneDrive-
    50 rockefeller.edu/Brickner JH/2024_0318_Crm1-ppx-
    51 GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/npc2018-master/results/PDB_files/3spokes-C3/rebuilt_and_beads_042824/2_Inner_ring_rebuilt.pdb 
    52 --- 
    53 warnings | Duplicate atom serial number found: 1 
    54 Duplicate atom serial number found: 2 
    55 Duplicate atom serial number found: 3 
    56 Duplicate atom serial number found: 4 
    57 Duplicate atom serial number found: 5 
    58 233583 messages similar to the above omitted 
    59  
    60 Chain information for 2_Inner_ring_rebuilt.pdb #2 
    61 --- 
    62 Chain | Description 
    63 A E I M Q U | No description available 
    64 B F J N R V | No description available 
    65 C G K O S W | No description available 
    66 D H L P T X | No description available 
    67  
    68 
    69 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    70 > JH/2024_0318_Crm1-ppx-
    71 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/npc2018-master/results/PDB_files/3spokes-C3/rebuilt_and_beads_042824/3_Membrane_ring.pdb"
    72 
    73 Chain information for 3_Membrane_ring.pdb #3 
    74 --- 
    75 Chain | Description 
    76 A F K P U Z | No description available 
    77 B G L Q V a | No description available 
    78 E J O T Y d | No description available 
    79  
    80 
    81 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    82 > JH/2024_0318_Crm1-ppx-
    83 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/npc2018-master/results/PDB_files/3spokes-C3/rebuilt_and_beads_042824/4_Mlps.pdb"
    84 
    85 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    86 > JH/2024_0318_Crm1-ppx-
    87 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/npc2018-master/results/PDB_files/3spokes-C3/rebuilt_and_beads_042824/5_Nic96complex.pdb"
    88 
    89 Chain information for 5_Nic96complex.pdb #5 
    90 --- 
    91 Chain | Description 
    92 A E I M Q U Y c g k o s | No description available 
    93 B F J N R V Z d h l p t | No description available 
    94 C G K O S W a e i m q u | No description available 
    95 D H L P T X b f j n r v | No description available 
    96  
    97 
    98 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    99 > JH/2024_0318_Crm1-ppx-
    100 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/npc2018-master/results/PDB_files/3spokes-C3/rebuilt_and_beads_042824/6_Nucleoplasm.pdb"
    101 
    102 Chain information for 6_Nucleoplasm.pdb #6 
    103 --- 
    104 Chain | Description 
    105 A B F G K L | No description available 
    106  
    107 
    108 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    109 > JH/2024_0318_Crm1-ppx-
    110 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/npc2018-master/results/PDB_files/3spokes-C3/rebuilt_and_beads_042824/7_Nup82complex_rebuilt.pdb"
    111 
    112 Summary of feedback from opening /Users/chris/Library/CloudStorage/OneDrive-
    113 rockefeller.edu/Brickner JH/2024_0318_Crm1-ppx-
    114 GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/npc2018-master/results/PDB_files/3spokes-C3/rebuilt_and_beads_042824/7_Nup82complex_rebuilt.pdb 
    115 --- 
    116 warnings | Duplicate atom serial number found: 1 
    117 Duplicate atom serial number found: 2 
    118 Duplicate atom serial number found: 3 
    119 Duplicate atom serial number found: 4 
    120 Duplicate atom serial number found: 5 
    121 46557 messages similar to the above omitted 
    122  
    123 Chain information for 7_Nup82complex_rebuilt.pdb #7 
    124 --- 
    125 Chain | Description 
    126 A B I J Q R | No description available 
    127 C D K L S T | No description available 
    128 E F M N U V | No description available 
    129 G H O P W X | No description available 
    130  
    131 
    132 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    133 > JH/2024_0318_Crm1-ppx-
    134 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/npc2018-master/results/PDB_files/3spokes-C3/rebuilt_and_beads_042824/8_Nup84complex_rebuilt.pdb"
    135 
    136 Summary of feedback from opening /Users/chris/Library/CloudStorage/OneDrive-
    137 rockefeller.edu/Brickner JH/2024_0318_Crm1-ppx-
    138 GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/npc2018-master/results/PDB_files/3spokes-C3/rebuilt_and_beads_042824/8_Nup84complex_rebuilt.pdb 
    139 --- 
    140 warnings | Duplicate atom serial number found: 1 
    141 Duplicate atom serial number found: 2 
    142 Duplicate atom serial number found: 3 
    143 Duplicate atom serial number found: 4 
    144 Duplicate atom serial number found: 5 
    145 201437 messages similar to the above omitted 
    146  
    147 Chain information for 8_Nup84complex_rebuilt.pdb #8 
    148 --- 
    149 Chain | Description 
    150 A H O V c j | No description available 
    151 B I P W d k | No description available 
    152 C J Q X e l | No description available 
    153 D K R Y f m | No description available 
    154 E L S Z g n | No description available 
    155 F M T a h o | No description available 
    156 G N U b i p | No description available 
    157  
    158 
    159 > set bgColor white
    160 
    161 > ui tool show "Side View"
    162 
    163 > lighting flat
    164 
    165 > save
    166 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Heat_Map_Session_Draft_v0.cxs
    167 
    168 ——— End of log from Mon May 6 12:18:50 2024 ———
    169 
    170 opened ChimeraX session 
    171 
    172 > setattr #1/A,B,C,D,E,F res Crm1NLFQ 2.38166202193355 create true
    173 
    174 Assigning Crm1NLFQ attribute to 936 items 
    175 
    176 > setattr #1/G,H,K,L,O,P res Crm1NLFQ 1.22402445115846 create true
    177 
    178 Assigning Crm1NLFQ attribute to 930 items 
    179 
    180 > setattr #1/I,M,Q res Crm1NLFQ 0.536223898669483 create true
    181 
    182 Assigning Crm1NLFQ attribute to 6 items 
    183 
    184 > setattr #1/J,N,R res Crm1NLFQ 1.08264889812706 create true
    185 
    186 Assigning Crm1NLFQ attribute to 1254 items 
    187 
    188 > setattr #2/A,E,I,M,Q,U res Crm1NLFQ 0.597831925398353 create true
    189 
    190 Assigning Crm1NLFQ attribute to 6684 items 
    191 
    192 > setattr #2/B,F,J,N,R,V res Crm1NLFQ 1.74471138301985 create true
    193 
    194 Assigning Crm1NLFQ attribute to 6702 items 
    195 
    196 > setattr #2/C,G,K,O,S,W res Crm1NLFQ 0.701346964994624 create true
    197 
    198 Assigning Crm1NLFQ attribute to 8160 items 
    199 
    200 > setattr #2/D,H,L,P,T,X res Crm1NLFQ 0.604768819846228 create true
    201 
    202 Assigning Crm1NLFQ attribute to 8940 items 
    203 
    204 > setattr #3/A,F,K,P,U,Z res Crm1NLFQ 1.08945584785413 create true
    205 
    206 Assigning Crm1NLFQ attribute to 618 items 
    207 
    208 > setattr #3/B,G,L,Q,V,a res Crm1NLFQ 1.47312124363099 create true
    209 
    210 Assigning Crm1NLFQ attribute to 624 items 
    211 
    212 > setattr #3/C,H,M,R,W,b res Crm1NLFQ 0.391847736153937 create true
    213 
    214 Assigning Crm1NLFQ attribute to 42 items 
    215 
    216 > setattr #3/D,I,N,S,X,c res Crm1NLFQ 0.488245399918295 create true
    217 
    218 Assigning Crm1NLFQ attribute to 36 items 
    219 
    220 > setattr #3/E,J,O,T,Y,d res Crm1NLFQ 0.294722797273403 create true
    221 
    222 Assigning Crm1NLFQ attribute to 5262 items 
    223 
    224 > setattr #4/A,C,E res Crm1NLFQ 1.19473175617562 create true
    225 
    226 Assigning Crm1NLFQ attribute to 30 items 
    227 
    228 > setattr #4/B,D,F res Crm1NLFQ 0.809709985544316 create true
    229 
    230 Assigning Crm1NLFQ attribute to 30 items 
    231 
    232 > setattr #5/A,E,I,M,Q,U,Y,c,g,k,o,s res Crm1NLFQ 1.52830905473377 create true
    233 
    234 Assigning Crm1NLFQ attribute to 7452 items 
    235 
    236 > setattr #5/B,F,J,N,R,V,Z,d,h,l,p,t res Crm1NLFQ 2.02267776251579 create true
    237 
    238 Assigning Crm1NLFQ attribute to 2016 items 
    239 
    240 > setattr #5/C,G,K,O,S,W,a,e,i,m,q,u res Crm1NLFQ 1.00048207546034 create true
    241 
    242 Assigning Crm1NLFQ attribute to 2088 items 
    243 
    244 > setattr #5/D,H,L,P,T,X,b,f,j,n,r,v res Crm1NLFQ 1.49020443076243 create true
    245 
    246 Assigning Crm1NLFQ attribute to 2676 items 
    247 
    248 > setattr #6/A,B,F,G,K,L res Crm1NLFQ 1.24550369722019 create true
    249 
    250 Assigning Crm1NLFQ attribute to 948 items 
    251 
    252 > setattr #6/C,H,M res Crm1NLFQ 1.8417969872815 create true
    253 
    254 Assigning Crm1NLFQ attribute to 24 items 
    255 
    256 > setattr #6/D,E,I,J,N,O:26-326 res Crm1NLFQ 1.14206606096634 create true
    257 
    258 Assigning Crm1NLFQ attribute to 42 items 
    259 
    260 > setattr #7/A,B,I,J,Q,R res Crm1NLFQ 0.228698323285423 create true
    261 
    262 Assigning Crm1NLFQ attribute to 516 items 
    263 
    264 > setattr #7/C,D,K,L,S,T res Crm1NLFQ 1.21640752311181 create true
    265 
    266 Assigning Crm1NLFQ attribute to 3660 items 
    267 
    268 > setattr #7/E,F,M,N,U,V res Crm1NLFQ 1.62426002958665 create true
    269 
    270 Assigning Crm1NLFQ attribute to 1170 items 
    271 
    272 > setattr #7/G,H,O,P,W,X res Crm1NLFQ 2.02267776251579 create true
    273 
    274 Assigning Crm1NLFQ attribute to 984 items 
    275 
    276 > setattr #8/A,H,O,V,c,j res Crm1NLFQ 0.961328368645745 create true
    277 
    278 Assigning Crm1NLFQ attribute to 3894 items 
    279 
    280 > setattr #8/B,I,P,W,d,k res Crm1NLFQ 0.247334874308266 create true
    281 
    282 Assigning Crm1NLFQ attribute to 3702 items 
    283 
    284 > setattr #8/C,J,Q,X,e,l res Crm1NLFQ 0.802044146307349 create true
    285 
    286 Assigning Crm1NLFQ attribute to 5394 items 
    287 
    288 > setattr #8/D,K,R,Y,f,m res Crm1NLFQ 0.860613109076584 create true
    289 
    290 Assigning Crm1NLFQ attribute to 6186 items 
    291 
    292 > setattr #8/E,L,S,Z,g,n res Crm1NLFQ 0.996338220326422 create true
    293 
    294 Assigning Crm1NLFQ attribute to 3186 items 
    295 
    296 > setattr #8/F,M,T,a,h,o res Crm1NLFQ 0.865902367324094 create true
    297 
    298 Assigning Crm1NLFQ attribute to 1842 items 
    299 
    300 > setattr #8/G,N,U,b,i,p res Crm1NLFQ 0.849532400125049 create true
    301 
    302 Assigning Crm1NLFQ attribute to 1686 items 
    303 
    304 > setattr #6/D,E,I,J,N,O:375 res Crm1NLFQ 2.30373726262289 create true
    305 
    306 Assigning Crm1NLFQ attribute to 6 items 
    307 
    308 > setattr #1/A,B,C,D,E,F res Nup2NLFQ 2.01809980196957 create true
    309 
    310 Assigning Nup2NLFQ attribute to 936 items 
    311 
    312 > setattr #1/G,H,K,L,O,P res Nup2NLFQ 1.27358039240058 create true
    313 
    314 Assigning Nup2NLFQ attribute to 930 items 
    315 
    316 > setattr #1/I,M,Q res Nup2NLFQ 0.150699272428343 create true
    317 
    318 Assigning Nup2NLFQ attribute to 6 items 
    319 
    320 > setattr #1/J,N,R res Nup2NLFQ 0.178060851767126 create true
    321 
    322 Assigning Nup2NLFQ attribute to 1254 items 
    323 
    324 > setattr #2/A,E,I,M,Q,U res Nup2NLFQ 0.0307981194447392 create true
    325 
    326 Assigning Nup2NLFQ attribute to 6684 items 
    327 
    328 > setattr #2/B,F,J,N,R,V res Nup2NLFQ 1.13488305198147 create true
    329 
    330 Assigning Nup2NLFQ attribute to 6702 items 
    331 
    332 > setattr #2/C,G,K,O,S,W res Nup2NLFQ 0.746958209982684 create true
    333 
    334 Assigning Nup2NLFQ attribute to 8160 items 
    335 
    336 > setattr #2/D,H,L,P,T,X res Nup2NLFQ 0.589251032249736 create true
    337 
    338 Assigning Nup2NLFQ attribute to 8940 items 
    339 
    340 > setattr #3/A,F,K,P,U,Z res Nup2NLFQ 0.95583900695723 create true
    341 
    342 Assigning Nup2NLFQ attribute to 618 items 
    343 
    344 > setattr #3/B,G,L,Q,V,a res Nup2NLFQ 1.04042670948573 create true
    345 
    346 Assigning Nup2NLFQ attribute to 624 items 
    347 
    348 > setattr #3/C,H,M,R,W,b res Nup2NLFQ 0.0138490950140482 create true
    349 
    350 Assigning Nup2NLFQ attribute to 42 items 
    351 
    352 > setattr #3/D,I,N,S,X,c res Nup2NLFQ 0.0376345003195378 create true
    353 
    354 Assigning Nup2NLFQ attribute to 36 items 
    355 
    356 > setattr #3/E,J,O,T,Y,d res Nup2NLFQ 0.0229802627783679 create true
    357 
    358 Assigning Nup2NLFQ attribute to 5262 items 
    359 
    360 > setattr #4/A,C,E res Nup2NLFQ 0.0674911092494493 create true
    361 
    362 Assigning Nup2NLFQ attribute to 30 items 
    363 
    364 > setattr #4/B,D,F res Nup2NLFQ 0.0424242698014889 create true
    365 
    366 Assigning Nup2NLFQ attribute to 30 items 
    367 
    368 > setattr #5/A,E,I,M,Q,U,Y,c,g,k,o,s res Nup2NLFQ 1.26445385289306 create true
    369 
    370 Assigning Nup2NLFQ attribute to 7452 items 
    371 
    372 > setattr #5/B,F,J,N,R,V,Z,d,h,l,p,t res Nup2NLFQ 1.36738787621736 create true
    373 
    374 Assigning Nup2NLFQ attribute to 2016 items 
    375 
    376 > setattr #5/C,G,K,O,S,W,a,e,i,m,q,u res Nup2NLFQ 0.989737360684629 create
    377 > true
    378 
    379 Assigning Nup2NLFQ attribute to 2088 items 
    380 
    381 > setattr #5/D,H,L,P,T,X,b,f,j,n,r,v res Nup2NLFQ 1.36737792893473 create true
    382 
    383 Assigning Nup2NLFQ attribute to 2676 items 
    384 
    385 > setattr #6/A,B,F,G,K,L res Nup2NLFQ 0.123201507221415 create true
    386 
    387 Assigning Nup2NLFQ attribute to 948 items 
    388 
    389 > setattr #6/C,H,M res Nup2NLFQ 0.27264620114483 create true
    390 
    391 Assigning Nup2NLFQ attribute to 24 items 
    392 
    393 > setattr #6/D,E,I,J,N,O res Nup2NLFQ 4.10139497431253 create true
    394 
    395 Assigning Nup2NLFQ attribute to 48 items 
    396 
    397 > setattr #7/A,B,I,J,Q,R res Nup2NLFQ 0.0748716647813976 create true
    398 
    399 Assigning Nup2NLFQ attribute to 516 items 
    400 
    401 > setattr #7/C,D,K,L,S,T res Nup2NLFQ 0.597918034881581 create true
    402 
    403 Assigning Nup2NLFQ attribute to 3660 items 
    404 
    405 > setattr #7/E,F,M,N,U,V res Nup2NLFQ 0.825650489581971 create true
    406 
    407 Assigning Nup2NLFQ attribute to 1170 items 
    408 
    409 > setattr #7/G,H,O,P,W,X res Nup2NLFQ 1.36738787621736 create true
    410 
    411 Assigning Nup2NLFQ attribute to 984 items 
    412 
    413 > setattr #8/A,H,O,V,c,j res Nup2NLFQ 0.0810547809605979 create true
    414 
    415 Assigning Nup2NLFQ attribute to 3894 items 
    416 
    417 > setattr #8/B,I,P,W,d,k res Nup2NLFQ 0.0237266442250638 create true
    418 
    419 Assigning Nup2NLFQ attribute to 3702 items 
    420 
    421 > setattr #8/C,J,Q,X,e,l res Nup2NLFQ 0.093033124081817 create true
    422 
    423 Assigning Nup2NLFQ attribute to 5394 items 
    424 
    425 > setattr #8/D,K,R,Y,f,m res Nup2NLFQ 0.070783010589185 create true
    426 
    427 Assigning Nup2NLFQ attribute to 6186 items 
    428 
    429 > setattr #8/E,L,S,Z,g,n res Nup2NLFQ 0.11779171409383 create true
    430 
    431 Assigning Nup2NLFQ attribute to 3186 items 
    432 
    433 > setattr #8/F,M,T,a,h,o res Nup2NLFQ 0.0751950416310119 create true
    434 
    435 Assigning Nup2NLFQ attribute to 1842 items 
    436 
    437 > setattr #8/G,N,U,b,i,p res Nup2NLFQ 0.105524290335215 create true
    438 
    439 Assigning Nup2NLFQ attribute to 1686 items 
    440 
    441 > setattr #1/A,B,C,D,E,F:914-1113 res LexAPos1 31.1111111111111 create true
    442 
    443 Assigning LexAPos1 attribute to 894 items 
    444 
    445 > setattr #1/G,H,K,L,O,P:760-959 res LexAPos1 47.3333333333333 create true
    446 
    447 Assigning LexAPos1 attribute to 882 items 
    448 
    449 > setattr #2/A,E,I,M,Q,U:1192-1391 res LexAPos1 52.4579380139152 create true
    450 
    451 Assigning LexAPos1 attribute to 1200 items 
    452 
    453 > setattr #2/B,F,J,N,R,V:1303-1502 res LexAPos1 36.6666666666667 create true
    454 
    455 Assigning LexAPos1 attribute to 1200 items 
    456 
    457 > setattr #2/C,G,K,O,S,W:1456-1655 res LexAPos1 30 create true
    458 
    459 Assigning LexAPos1 attribute to 1008 items 
    460 
    461 > setattr #2/D,H,L,P,T,X:1484-1683 res LexAPos1 45.0537634408602 create true
    462 
    463 Assigning LexAPos1 attribute to 918 items 
    464 
    465 > setattr #3/A,F,K,P,U,Z:276-475 res LexAPos1 42.8560188827695 create true
    466 
    467 Assigning LexAPos1 attribute to 420 items 
    468 
    469 > setattr #3/D,I,N,S,X,c:76-275 res LexAPos1 45.8333333333333 create true
    470 
    471 Assigning LexAPos1 attribute to 30 items 
    472 
    473 > setattr #3/E,J,O,T,Y,d:1138-1337 res LexAPos1 49.0752688172043 create true
    474 
    475 Assigning LexAPos1 attribute to 1092 items 
    476 
    477 > setattr #4/A,C,E:463-702 res LexAPos1 49.8139880952381 create true
    478 
    479 Assigning LexAPos1 attribute to 18 items 
    480 
    481 > setattr #4/B,D,F:440-678 res LexAPos1 45.4039342117559 create true
    482 
    483 Assigning LexAPos1 attribute to 18 items 
    484 
    485 > setattr #5/A,E,I,M,Q,U,Y,c,g,k,o,s:640-839 res LexAPos1 50.2240143369176
    486 > create true
    487 
    488 Assigning LexAPos1 attribute to 2316 items 
    489 
    490 > setattr #5/B,F,J,N,R,V,Z,d,h,l,p,t:624-823 res LexAPos1 25.1238188334963
    491 > create true
    492 
    493 Assigning LexAPos1 attribute to 2004 items 
    494 
    495 > setattr #5/C,G,K,O,S,W,a,e,i,m,q,u:273-472 res LexAPos1 52.7993348115299
    496 > create true
    497 
    498 Assigning LexAPos1 attribute to 2040 items 
    499 
    500 > setattr #6/C,H,M:126-351 res LexAPos1 56.8225806451613 create true
    501 
    502 Assigning LexAPos1 attribute to 18 items 
    503 
    504 > setattr #6/D,E,I,J,N,O:76-276 res LexAPos1 23.010752688172 create true
    505 
    506 Assigning LexAPos1 attribute to 30 items 
    507 
    508 > setattr #7/C,D,K,L,S,T:514-713 res LexAPos1 45.0309139784946 create true
    509 
    510 Assigning LexAPos1 attribute to 1032 items 
    511 
    512 > setattr #7/E,F,M,N,U,V:1261-1460 res LexAPos1 50.4838709677419 create true
    513 
    514 Assigning LexAPos1 attribute to 936 items 
    515 
    516 > setattr #7/G,H,O,P,W,X:624-823 res LexAPos1 25.1238188334963 create true
    517 
    518 Assigning LexAPos1 attribute to 984 items 
    519 
    520 > setattr #8/A,H,O,V,c,j:527-726 res LexAPos1 32.5 create true
    521 
    522 Assigning LexAPos1 attribute to 1128 items 
    523 
    524 > setattr #8/B,I,P,W,d,k:545-744 res LexAPos1 30 create true
    525 
    526 Assigning LexAPos1 attribute to 870 items 
    527 
    528 > setattr #8/D,K,R,Y,f,m:958-1157 res LexAPos1 41.8279569892473 create true
    529 
    530 Assigning LexAPos1 attribute to 1188 items 
    531 
    532 > setattr #8/E,L,S,Z,g,n:513-712 res LexAPos1 39.6989247311828 create true
    533 
    534 Assigning LexAPos1 attribute to 834 items 
    535 
    536 > setattr #6/D,E,I,J,N,O:326-375 res LexAPos1 55.5555555555556 create true
    537 
    538 Assigning LexAPos1 attribute to 12 items 
    539 
    540 > save
    541 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Heat_Map_Session_Draft_v1_Crm1-Nup2-LexA_Loaded.cxs
    542 
    543 > ui tool show "Render by Attribute"
    544 
    545 > key reds-3 :0.00 :1.25 :2.50 showTool true
    546 
    547 > ui mousemode right "color key"
    548 
    549 > ui mousemode right translate
    550 
    551 > color byattribute r:Crm1NLFQ #4#!1-3,5-8 target absc palette
    552 > 0,#fee0d2:1.25,#fc9272:2.5,#de2d26 noValueColor grey
    553 
    554 532020 atoms, 87726 residues, atom Crm1NLFQ range 0.229 to 2.38 
    555 
    556 > save
    557 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Heat_Map_Session_Draft_v2_Crm1-colored.cxs
    558 
    559 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    560 > JH/2024_0318_Crm1-ppx-
    561 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    562 > Ordered/1_Cytoplasm_C3_Nup116.1.mrc"
    563 
    564 Opened 1_Cytoplasm_C3_Nup116.1.mrc as #10, grid size 57,116,48, pixel 5, shown
    565 at level 0.0943, step 1, values float32 
    566 
    567 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    568 > JH/2024_0318_Crm1-ppx-
    569 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    570 > Ordered/2_Cytoplasm_C3_Nup116.2.mrc"
    571 
    572 Opened 2_Cytoplasm_C3_Nup116.2.mrc as #11, grid size 55,126,39, pixel 5, shown
    573 at level 0.0953, step 1, values float32 
    574 
    575 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    576 > JH/2024_0318_Crm1-ppx-
    577 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    578 > Ordered/3_Cytoplasm_C3_Nup100.1.mrc"
    579 
    580 Opened 3_Cytoplasm_C3_Nup100.1.mrc as #12, grid size 73,129,37, pixel 5, shown
    581 at level 0.097, step 1, values float32 
    582 
    583 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    584 > JH/2024_0318_Crm1-ppx-
    585 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    586 > Ordered/4_Cytoplasm_C3_Nup100.2.mrc"
    587 
    588 Opened 4_Cytoplasm_C3_Nup100.2.mrc as #13, grid size 61,106,31, pixel 5, shown
    589 at level 0.154, step 1, values float32 
    590 
    591 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    592 > JH/2024_0318_Crm1-ppx-
    593 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    594 > Ordered/5_Cytoplasm_C3_Nup42.mrc"
    595 
    596 Opened 5_Cytoplasm_C3_Nup42.mrc as #14, grid size 35,71,21, pixel 5, shown at
    597 level 0.0912, step 1, values float32 
    598 
    599 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    600 > JH/2024_0318_Crm1-ppx-
    601 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    602 > Ordered/6_Cytoplasm_C3_Gle1.mrc"
    603 
    604 Opened 6_Cytoplasm_C3_Gle1.mrc as #15, grid size 40,110,19, pixel 5, shown at
    605 level 0.1, step 1, values float32 
    606 
    607 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    608 > JH/2024_0318_Crm1-ppx-
    609 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    610 > Ordered/7_Inner_ring_C3_Nup157.mrc"
    611 
    612 Opened 7_Inner_ring_C3_Nup157.mrc as #16, grid size 68,149,74, pixel 5, shown
    613 at level 0.258, step 1, values float32 
    614 
    615 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    616 > JH/2024_0318_Crm1-ppx-
    617 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    618 > Ordered/8_Inner_ring_C3_Nup170.mrc"
    619 
    620 Opened 8_Inner_ring_C3_Nup170.mrc as #17, grid size 72,168,48, pixel 5, shown
    621 at level 0.325, step 1, values float32 
    622 
    623 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    624 > JH/2024_0318_Crm1-ppx-
    625 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    626 > Ordered/9_Inner_ring_C3_Nup188.mrc"
    627 
    628 Opened 9_Inner_ring_C3_Nup188.mrc as #18, grid size 54,126,61, pixel 5, shown
    629 at level 0.445, step 1, values float32 
    630 
    631 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    632 > JH/2024_0318_Crm1-ppx-
    633 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    634 > Ordered/10_Inner_ring_C3_Nup192.mrc"
    635 
    636 Opened 10_Inner_ring_C3_Nup192.mrc as #19, grid size 63,129,50, pixel 5, shown
    637 at level 0.461, step 1, values float32 
    638 
    639 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    640 > JH/2024_0318_Crm1-ppx-
    641 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    642 > Ordered/11_Membrane_ring_C3_Nup53.mrc"
    643 
    644 Opened 11_Membrane_ring_C3_Nup53.mrc as #20, grid size 78,165,71, pixel 5,
    645 shown at level 0.0903, step 1, values float32 
    646 
    647 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    648 > JH/2024_0318_Crm1-ppx-
    649 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    650 > Ordered/12_Membrane_ring_C3_Nup59.mrc"
    651 
    652 Opened 12_Membrane_ring_C3_Nup59.mrc as #21, grid size 78,160,52, pixel 5,
    653 shown at level 0.141, step 1, values float32 
    654 
    655 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    656 > JH/2024_0318_Crm1-ppx-
    657 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    658 > Ordered/13_Membrane_ring_C3_Ndc1.mrc"
    659 
    660 Opened 13_Membrane_ring_C3_Ndc1.mrc as #22, grid size 61,154,45, pixel 5,
    661 shown at level 0.256, step 1, values float32 
    662 
    663 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    664 > JH/2024_0318_Crm1-ppx-
    665 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    666 > Ordered/14_Membrane_ring_C3_Pom34.mrc"
    667 
    668 Opened 14_Membrane_ring_C3_Pom34.mrc as #23, grid size 62,153,29, pixel 5,
    669 shown at level 0.177, step 1, values float32 
    670 
    671 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    672 > JH/2024_0318_Crm1-ppx-
    673 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    674 > Ordered/15_Membrane_ring_C3_Pom152.mrc"
    675 
    676 Opened 15_Membrane_ring_C3_Pom152.mrc as #24, grid size 117,220,35, pixel 5,
    677 shown at level 0.231, step 1, values float32 
    678 
    679 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    680 > JH/2024_0318_Crm1-ppx-
    681 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    682 > Ordered/16_Mlps_C3_Mlp1.mrc"
    683 
    684 Opened 16_Mlps_C3_Mlp1.mrc as #25, grid size 47,122,45, pixel 5, shown at
    685 level 0.139, step 1, values float32 
    686 
    687 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    688 > JH/2024_0318_Crm1-ppx-
    689 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    690 > Ordered/17_Mlps_C3_Mlp2.mrc"
    691 
    692 Opened 17_Mlps_C3_Mlp2.mrc as #26, grid size 63,127,27, pixel 5, shown at
    693 level 0.203, step 1, values float32 
    694 
    695 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    696 > JH/2024_0318_Crm1-ppx-
    697 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    698 > Ordered/18_Mlps_C3_Mlps.mrc"
    699 
    700 Opened 18_Mlps_C3_Mlps.mrc as #27, grid size 45,76,55, pixel 10, shown at
    701 level 0.191, step 1, values float32 
    702 
    703 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    704 > JH/2024_0318_Crm1-ppx-
    705 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    706 > Ordered/19_Nic96complex_C3_Nic96.1.mrc"
    707 
    708 Opened 19_Nic96complex_C3_Nic96.1.mrc as #28, grid size 73,144,65, pixel 5,
    709 shown at level 0.202, step 1, values float32 
    710 
    711 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    712 > JH/2024_0318_Crm1-ppx-
    713 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    714 > Ordered/20_Nic96complex_C3_Nsp1.3.mrc"
    715 
    716 Opened 20_Nic96complex_C3_Nsp1.3.mrc as #29, grid size 55,106,37, pixel 5,
    717 shown at level 0.143, step 1, values float32 
    718 
    719 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    720 > JH/2024_0318_Crm1-ppx-
    721 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    722 > Ordered/21_Nic96complex_C3_Nup49.1.mrc"
    723 
    724 Opened 21_Nic96complex_C3_Nup49.1.mrc as #30, grid size 80,151,45, pixel 5,
    725 shown at level 0.0885, step 1, values float32 
    726 
    727 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    728 > JH/2024_0318_Crm1-ppx-
    729 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    730 > Ordered/22_Nic96complex_C3_Nup57.1.mrc"
    731 
    732 Opened 22_Nic96complex_C3_Nup57.1.mrc as #31, grid size 57,111,42, pixel 5,
    733 shown at level 0.174, step 1, values float32 
    734 
    735 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    736 > JH/2024_0318_Crm1-ppx-
    737 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    738 > Ordered/23_Nic96complex_C3_Nic96.2.mrc"
    739 
    740 Opened 23_Nic96complex_C3_Nic96.2.mrc as #32, grid size 58,131,50, pixel 5,
    741 shown at level 0.314, step 1, values float32 
    742 
    743 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    744 > JH/2024_0318_Crm1-ppx-
    745 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    746 > Ordered/24_Nic96complex_C3_Nsp1.4.mrc"
    747 
    748 Opened 24_Nic96complex_C3_Nsp1.4.mrc as #33, grid size 48,124,33, pixel 5,
    749 shown at level 0.153, step 1, values float32 
    750 
    751 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    752 > JH/2024_0318_Crm1-ppx-
    753 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    754 > Ordered/25_Nic96complex_C3_Nup49.2.mrc"
    755 
    756 Opened 25_Nic96complex_C3_Nup49.2.mrc as #34, grid size 52,119,32, pixel 5,
    757 shown at level 0.165, step 1, values float32 
    758 
    759 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    760 > JH/2024_0318_Crm1-ppx-
    761 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    762 > Ordered/26_Nic96complex_C3_Nup57.2.mrc"
    763 
    764 Opened 26_Nic96complex_C3_Nup57.2.mrc as #35, grid size 52,122,29, pixel 5,
    765 shown at level 0.206, step 1, values float32 
    766 
    767 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    768 > JH/2024_0318_Crm1-ppx-
    769 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    770 > Ordered/27_Nucleoplasm_C3_Nup145.1.mrc"
    771 
    772 Opened 27_Nucleoplasm_C3_Nup145.1.mrc as #36, grid size 67,137,44, pixel 5,
    773 shown at level 0.0873, step 1, values float32 
    774 
    775 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    776 > JH/2024_0318_Crm1-ppx-
    777 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    778 > Ordered/28_Nucleoplasm_C3_Nup145.2.mrc"
    779 
    780 Opened 28_Nucleoplasm_C3_Nup145.2.mrc as #37, grid size 61,123,44, pixel 5,
    781 shown at level 0.101, step 1, values float32 
    782 
    783 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    784 > JH/2024_0318_Crm1-ppx-
    785 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    786 > Ordered/29_Nucleoplasm_C3_Nup1.mrc"
    787 
    788 Opened 29_Nucleoplasm_C3_Nup1.mrc as #38, grid size 67,136,30, pixel 5, shown
    789 at level 0.112, step 1, values float32 
    790 
    791 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    792 > JH/2024_0318_Crm1-ppx-
    793 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    794 > Ordered/30_Nucleoplasm_C3_Nup60.1.mrc"
    795 
    796 Opened 30_Nucleoplasm_C3_Nup60.1.mrc as #39, grid size 67,155,37, pixel 5,
    797 shown at level 0.093, step 1, values float32 
    798 
    799 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    800 > JH/2024_0318_Crm1-ppx-
    801 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    802 > Ordered/31_Nucleoplasm_C3_Nup60.2.mrc"
    803 
    804 Opened 31_Nucleoplasm_C3_Nup60.2.mrc as #40, grid size 67,157,45, pixel 5,
    805 shown at level 0.0743, step 1, values float32 
    806 
    807 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    808 > JH/2024_0318_Crm1-ppx-
    809 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    810 > Ordered/32_Nup82complex_C3_Nup82_Whole.mrc"
    811 
    812 Opened 32_Nup82complex_C3_Nup82_Whole.mrc as #41, grid size 75,144,43, pixel
    813 5, shown at level 0.401, step 1, values float32 
    814 
    815 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    816 > JH/2024_0318_Crm1-ppx-
    817 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    818 > Ordered/33_Nup84complex_C3_Nup84_Whole.mrc"
    819 
    820 Opened 33_Nup84complex_C3_Nup84_Whole.mrc as #42, grid size 117,221,42, pixel
    821 5, shown at level 0.364, step 1, values float32 
    822 
    823 > open "/Users/chris/Library/CloudStorage/OneDrive-rockefeller.edu/Brickner
    824 > JH/2024_0318_Crm1-ppx-
    825 > GFP_Heat_Map/Data_Files/2018_Kim_et_al_Zenodo/3spokes-C3_Re-
    826 > Ordered/34_Nup84complex_C3_Nup84@11_Whole.mrc"
    827 
    828 Opened 34_Nup84complex_C3_Nup84@11_Whole.mrc as #43, grid size 117,222,42,
    829 pixel 5, shown at level 0.362, step 1, values float32 
    830 
    831 > volume #27 color grey
    832 
    833 > volume #10 encloseVolume 297180
    834 
    835 > volume #11 encloseVolume 297180
    836 
    837 > volume #12 encloseVolume 325476
    838 
    839 > volume #13 encloseVolume 325476
    840 
    841 > volume #14 encloseVolume 51996
    842 
    843 > volume #15 encloseVolume 450618
    844 
    845 > volume #16 encloseVolume 1705806
    846 
    847 > volume #17 encloseVolume 1845477
    848 
    849 > volume #18 encloseVolume 2053404
    850 
    851 > volume #19 encloseVolume 2085678
    852 
    853 > volume #20 encloseVolume 764016
    854 
    855 > volume #21 encloseVolume 853644
    856 
    857 > volume #22 encloseVolume 1076352
    858 
    859 > volume #23 encloseVolume 497016
    860 
    861 > volume #24 encloseVolume 2201880
    862 
    863 > volume #25 level 0.25
    864 
    865 > volume #26 level 0.25
    866 
    867 > volume #27 level 0.25
    868 
    869 > volume #28 encloseVolume 1396344
    870 
    871 > volume #29 encloseVolume 362868
    872 
    873 > volume #30 encloseVolume 438432
    874 
    875 > volume #31 encloseVolume 556212
    876 
    877 > volume #32 encloseVolume 1396344
    878 
    879 > volume #33 encloseVolume 362868
    880 
    881 > volume #34 encloseVolume 438432
    882 
    883 > volume #35 encloseVolume 556212
    884 
    885 > volume #36 encloseVolume 325458
    886 
    887 > volume #37 encloseVolume 325458
    888 
    889 > volume #38 encloseVolume 281058
    890 
    891 > volume #39 encloseVolume 315684
    892 
    893 > volume #40 encloseVolume 315684
    894 
    895 > volume #41 encloseVolume 1749285
    896 
    897 > volume #42 encloseVolume 3133552.5
    898 
    899 > volume #43 encloseVolume 3133552.5
    900 
    901 > save
    902 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Heat_Map_Session_Draft_v3_Crm1-colored-
    903 > models.cxs
    904 
    905 > color zone #10 near #1 distance 60 sharpEdges true
    906 
    907 > color zone #11 near #1 distance 60 sharpEdges true
    908 
    909 > color zone #12 near #1 distance 60 sharpEdges true
    910 
    911 > color zone #13 near #1 distance 60 sharpEdges true
    912 
    913 > color zone #14 near #1 distance 60 sharpEdges true
    914 
    915 > color zone #15 near #1 distance 60 sharpEdges true
    916 
    917 > color zone #16 near #2 distance 60 sharpEdges true
    918 
    919 > color zone #17 near #2 distance 60 sharpEdges true
    920 
    921 > color zone #18 near #2 distance 60 sharpEdges true
    922 
    923 > color zone #19 near #2 distance 60 sharpEdges true
    924 
    925 > color zone #20 near #3 distance 60 sharpEdges true
    926 
    927 > color zone #21 near #3 distance 60 sharpEdges true
    928 
    929 > color zone #22 near #3 distance 60 sharpEdges true
    930 
    931 > color zone #23 near #3 distance 60 sharpEdges true
    932 
    933 > color zone #24 near #3 distance 60 sharpEdges true
    934 
    935 > color zone #25 near #4 distance 60 sharpEdges true
    936 
    937 > color zone #26 near #4 distance 60 sharpEdges true
    938 
    939 > color zone #27 near #4 distance 60 sharpEdges true
    940 
    941 > color zone #28 near #5 distance 60 sharpEdges true
    942 
    943 > color zone #29 near #5 distance 60 sharpEdges true
    944 
    945 > color zone #30 near #5 distance 60 sharpEdges true
    946 
    947 > color zone #31 near #5 distance 60 sharpEdges true
    948 
    949 > color zone #32 near #5 distance 60 sharpEdges true
    950 
    951 > color zone #33 near #5 distance 60 sharpEdges true
    952 
    953 > color zone #34 near #5 distance 60 sharpEdges true
    954 
    955 > color zone #35 near #5 distance 60 sharpEdges true
    956 
    957 > color zone #36 near #6 distance 60 sharpEdges true
    958 
    959 > color zone #37 near #6 distance 60 sharpEdges true
    960 
    961 > color zone #38 near #6 distance 60 sharpEdges true
    962 
    963 > color zone #39 near #6 distance 60 sharpEdges true
    964 
    965 > color zone #40 near #6 distance 60 sharpEdges true
    966 
    967 > color zone #41 near #7 distance 60 sharpEdges true
    968 
    969 > color zone #42 near #8 distance 60 sharpEdges true
    970 
    971 > color zone #43 near #8 distance 60 sharpEdges true
    972 
    973 > hide #4#!1-3,5-8 target m
    974 
    975 > ui tool show "Side View"
    976 
    977 > save
    978 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Heat_Map_Session_Draft_v4_Crm1-colored-
    979 > maps.cxs
    980 
    981 ——— End of log from Mon May 6 12:50:15 2024 ———
    982 
    983 opened ChimeraX session 
    984 
    985 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    986 
    987 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    988 
    989 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    990 
    991 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    992 
    993 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    994 
    995 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    996 
    997 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    998 
    999 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    1000 
    1001 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    1002 
    1003 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    1004 
    1005 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    1006 
    1007 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    1008 
    1009 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    1010 
    1011 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    1012 
    1013 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    1014 
    1015 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    1016 
    1017 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    1018 
    1019 > color zone #27 near #4 distance 60 sharpEdges true
    1020 
    1021 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    1022 
    1023 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    1024 
    1025 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    1026 
    1027 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    1028 
    1029 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    1030 
    1031 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    1032 
    1033 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    1034 
    1035 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    1036 
    1037 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    1038 
    1039 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    1040 
    1041 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    1042 
    1043 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    1044 
    1045 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    1046 
    1047 > color zone #41 near #7 distance 60 sharpEdges true
    1048 
    1049 > color zone #42 near #8 distance 60 sharpEdges true
    1050 
    1051 > color zone #43 near #8 distance 60 sharpEdges true
    1052 
    1053 > ui tool show "Side View"
    1054 
    1055 > save
    1056 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Heat_Map_Session_Draft_v6_Crm1-colored-
    1057 > maps.cxs
    1058 
    1059 > save
    1060 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Brickner_Heat_Map_Session_Crm1_3-spoke.png
    1061 > width 2827 height 2160 supersample 4 transparentBackground true
    1062 
    1063 > ui tool show "Render by Attribute"
    1064 
    1065 [Repeated 2 time(s)]
    1066 
    1067 > key reds-3 :0.0 :2.1 :4.2 showTool true
    1068 
    1069 > ui mousemode right "color key"
    1070 
    1071 > ui mousemode right translate
    1072 
    1073 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target absc palette
    1074 > 0,#fee0d2:2.1,#fc9272:4.2,#de2d26 noValueColor grey
    1075 
    1076 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    1077 
    1078 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    1079 
    1080 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    1081 
    1082 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    1083 
    1084 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    1085 
    1086 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    1087 
    1088 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    1089 
    1090 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    1091 
    1092 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    1093 
    1094 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    1095 
    1096 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    1097 
    1098 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    1099 
    1100 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    1101 
    1102 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    1103 
    1104 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    1105 
    1106 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    1107 
    1108 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    1109 
    1110 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    1111 
    1112 > color zone #27 near #4 distance 60 sharpEdges true
    1113 
    1114 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    1115 
    1116 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    1117 
    1118 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    1119 
    1120 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    1121 
    1122 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    1123 
    1124 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    1125 
    1126 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    1127 
    1128 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    1129 
    1130 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    1131 
    1132 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    1133 
    1134 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    1135 
    1136 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    1137 
    1138 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    1139 
    1140 > color zone #41 near #7 distance 60 sharpEdges true
    1141 
    1142 > color zone #42 near #8 distance 60 sharpEdges true
    1143 
    1144 > color zone #43 near #8 distance 60 sharpEdges true
    1145 
    1146 > save
    1147 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Brickner_Heat_Map_Session_Nup2_3-spoke.png
    1148 > width 2827 height 2160 supersample 4 transparentBackground true
    1149 
    1150 > save
    1151 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Heat_Map_Session_Draft_v7_Nup2-colored-
    1152 > maps.cxs
    1153 
    1154 > ui tool show "Render by Attribute"
    1155 
    1156 > key blue:20 red:60 showTool true
    1157 
    1158 > ui mousemode right "color key"
    1159 
    1160 > ui mousemode right translate
    1161 
    1162 > color byattribute r:LexAPos1 #4#!1-3,5-8 target absc palette 20,blue:60,red
    1163 > noValueColor silver
    1164 
    1165 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    1166 
    1167 > volume #27 color silver
    1168 
    1169 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    1170 
    1171 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    1172 
    1173 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    1174 
    1175 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    1176 
    1177 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    1178 
    1179 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    1180 
    1181 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    1182 
    1183 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    1184 
    1185 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    1186 
    1187 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    1188 
    1189 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    1190 
    1191 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    1192 
    1193 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    1194 
    1195 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    1196 
    1197 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    1198 
    1199 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    1200 
    1201 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    1202 
    1203 > color zone #27 near #4 distance 60 sharpEdges true
    1204 
    1205 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    1206 
    1207 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    1208 
    1209 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    1210 
    1211 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    1212 
    1213 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    1214 
    1215 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    1216 
    1217 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    1218 
    1219 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    1220 
    1221 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    1222 
    1223 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    1224 
    1225 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    1226 
    1227 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    1228 
    1229 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    1230 
    1231 > color zone #41 near #7 distance 60 sharpEdges true
    1232 
    1233 > color zone #42 near #8 distance 60 sharpEdges true
    1234 
    1235 > color zone #43 near #8 distance 60 sharpEdges true
    1236 
    1237 > save
    1238 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Heat_Map_Session_Draft_v7_LexA-
    1239 > colored-maps.cxs
    1240 
    1241 ——— End of log from Mon May 6 14:47:47 2024 ———
    1242 
    1243 opened ChimeraX session 
    1244 
    1245 > ui tool show "Render by Attribute"
    1246 
    1247 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    1248 > 20,#fffb00:60,#011993 noValueColor white
    1249 
    1250 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    1251 
    1252 > ui tool show "Render by Attribute"
    1253 
    1254 > key #fffb00:20 #011993:60 showTool true
    1255 
    1256 > ui mousemode right "color key"
    1257 
    1258 > ui mousemode right translate
    1259 
    1260 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    1261 > 20,#fffb00:60,#011993 noValueColor white
    1262 
    1263 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    1264 
    1265 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    1266 
    1267 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    1268 
    1269 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    1270 
    1271 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    1272 
    1273 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    1274 
    1275 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    1276 
    1277 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    1278 
    1279 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    1280 
    1281 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    1282 
    1283 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    1284 
    1285 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    1286 
    1287 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    1288 
    1289 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    1290 
    1291 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    1292 
    1293 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    1294 
    1295 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    1296 
    1297 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    1298 
    1299 > color zone #27 near #4 distance 60 sharpEdges true
    1300 
    1301 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    1302 
    1303 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    1304 
    1305 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    1306 
    1307 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    1308 
    1309 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    1310 
    1311 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    1312 
    1313 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    1314 
    1315 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    1316 
    1317 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    1318 
    1319 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    1320 
    1321 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    1322 
    1323 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    1324 
    1325 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    1326 
    1327 > color zone #41 near #7 distance 60 sharpEdges true
    1328 
    1329 > color zone #42 near #8 distance 60 sharpEdges true
    1330 
    1331 > color zone #43 near #8 distance 60 sharpEdges true
    1332 
    1333 > ui tool show "Render by Attribute"
    1334 
    1335 > key #fff051:20 #54518d:60 showTool true
    1336 
    1337 > ui mousemode right "color key"
    1338 
    1339 > ui mousemode right translate
    1340 
    1341 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    1342 > 20,#fff051:60,#54518d noValueColor white
    1343 
    1344 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    1345 
    1346 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    1347 
    1348 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    1349 
    1350 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    1351 
    1352 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    1353 
    1354 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    1355 
    1356 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    1357 
    1358 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    1359 
    1360 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    1361 
    1362 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    1363 
    1364 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    1365 
    1366 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    1367 
    1368 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    1369 
    1370 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    1371 
    1372 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    1373 
    1374 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    1375 
    1376 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    1377 
    1378 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    1379 
    1380 > color zone #27 near #4 distance 60 sharpEdges true
    1381 
    1382 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    1383 
    1384 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    1385 
    1386 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    1387 
    1388 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    1389 
    1390 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    1391 
    1392 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    1393 
    1394 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    1395 
    1396 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    1397 
    1398 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    1399 
    1400 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    1401 
    1402 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    1403 
    1404 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    1405 
    1406 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    1407 
    1408 > color zone #41 near #7 distance 60 sharpEdges true
    1409 
    1410 > color zone #42 near #8 distance 60 sharpEdges true
    1411 
    1412 > color zone #43 near #8 distance 60 sharpEdges true
    1413 
    1414 > volume #27 color white
    1415 
    1416 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    1417 
    1418 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    1419 
    1420 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    1421 
    1422 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    1423 
    1424 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    1425 
    1426 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    1427 
    1428 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    1429 
    1430 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    1431 
    1432 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    1433 
    1434 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    1435 
    1436 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    1437 
    1438 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    1439 
    1440 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    1441 
    1442 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    1443 
    1444 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    1445 
    1446 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    1447 
    1448 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    1449 
    1450 > color zone #27 near #4 distance 60 sharpEdges true
    1451 
    1452 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    1453 
    1454 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    1455 
    1456 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    1457 
    1458 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    1459 
    1460 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    1461 
    1462 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    1463 
    1464 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    1465 
    1466 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    1467 
    1468 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    1469 
    1470 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    1471 
    1472 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    1473 
    1474 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    1475 
    1476 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    1477 
    1478 > color zone #41 near #7 distance 60 sharpEdges true
    1479 
    1480 > color zone #42 near #8 distance 60 sharpEdges true
    1481 
    1482 > color zone #43 near #8 distance 60 sharpEdges true
    1483 
    1484 > save
    1485 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Brickner_Heat_Map_Session_LexA_3-spoke_Y-P.png
    1486 > width 2827 height 2160 supersample 4
    1487 
    1488 > setattr #1/A,B,C,D,E,F res LexAPos2 31.1111111111111 create true
    1489 
    1490 Assigning LexAPos2 attribute to 936 items 
    1491 
    1492 > setattr #1/G,H,K,L,O,P res LexAPos2 47.3333333333333 create true
    1493 
    1494 Assigning LexAPos2 attribute to 930 items 
    1495 
    1496 > setattr #2/A,E,I,M,Q,U res LexAPos2 52.4579380139152 create true
    1497 
    1498 Assigning LexAPos2 attribute to 6684 items 
    1499 
    1500 > setattr #2/B,F,J,N,R,V res LexAPos2 36.6666666666667 create true
    1501 
    1502 Assigning LexAPos2 attribute to 6702 items 
    1503 
    1504 > setattr #2/C,G,K,O,S,W res LexAPos2 30 create true
    1505 
    1506 Assigning LexAPos2 attribute to 8160 items 
    1507 
    1508 > setattr #2/D,H,L,P,T,X res LexAPos2 45.0537634408602 create true
    1509 
    1510 Assigning LexAPos2 attribute to 8940 items 
    1511 
    1512 > setattr #3/A,F,K,P,U,Z res LexAPos2 42.8560188827695 create true
    1513 
    1514 Assigning LexAPos2 attribute to 618 items 
    1515 
    1516 > setattr #3/D,I,N,S,X,c res LexAPos2 45.8333333333333 create true
    1517 
    1518 Assigning LexAPos2 attribute to 36 items 
    1519 
    1520 > setattr #3/E,J,O,T,Y,d res LexAPos2 49.0752688172043 create true
    1521 
    1522 Assigning LexAPos2 attribute to 5262 items 
    1523 
    1524 > setattr #4/A,C,E res LexAPos2 49.8139880952381 create true
    1525 
    1526 Assigning LexAPos2 attribute to 30 items 
    1527 
    1528 > setattr #4/B,D,F res LexAPos2 45.4039342117559 create true
    1529 
    1530 Assigning LexAPos2 attribute to 30 items 
    1531 
    1532 > setattr #5/A,E,I,M,Q,U,Y,c,g,k,o,s res LexAPos2 50.2240143369176 create true
    1533 
    1534 Assigning LexAPos2 attribute to 7452 items 
    1535 
    1536 > setattr #5/B,F,J,N,R,V,Z,d,h,l,p,t res LexAPos2 25.1238188334963 create true
    1537 
    1538 Assigning LexAPos2 attribute to 2016 items 
    1539 
    1540 > setattr #5/C,G,K,O,S,W,a,e,i,m,q,u res LexAPos2 52.7993348115299 create true
    1541 
    1542 Assigning LexAPos2 attribute to 2088 items 
    1543 
    1544 > setattr #6/C,H,M res LexAPos2 56.8225806451613 create true
    1545 
    1546 Assigning LexAPos2 attribute to 24 items 
    1547 
    1548 > setattr #6/D,E,I,J,N,O:76-276 res LexAPos2 23.010752688172 create true
    1549 
    1550 Assigning LexAPos2 attribute to 30 items 
    1551 
    1552 > setattr #7/C,D,K,L,S,T res LexAPos2 45.0309139784946 create true
    1553 
    1554 Assigning LexAPos2 attribute to 3660 items 
    1555 
    1556 > setattr #7/E,F,M,N,U,V res LexAPos2 50.4838709677419 create true
    1557 
    1558 Assigning LexAPos2 attribute to 1170 items 
    1559 
    1560 > setattr #7/G,H,O,P,W,X res LexAPos2 25.1238188334963 create true
    1561 
    1562 Assigning LexAPos2 attribute to 984 items 
    1563 
    1564 > setattr #8/A,H,O,V,c,j res LexAPos2 32.5 create true
    1565 
    1566 Assigning LexAPos2 attribute to 3894 items 
    1567 
    1568 > setattr #8/B,I,P,W,d,k res LexAPos2 30 create true
    1569 
    1570 Assigning LexAPos2 attribute to 3702 items 
    1571 
    1572 > setattr #8/D,K,R,Y,f,m res LexAPos2 41.8279569892473 create true
    1573 
    1574 Assigning LexAPos2 attribute to 6186 items 
    1575 
    1576 > setattr #8/E,L,S,Z,g,n res LexAPos2 39.6989247311828 create true
    1577 
    1578 Assigning LexAPos2 attribute to 3186 items 
    1579 
    1580 > setattr #6/D,E,I,J,N,O:326-375 res LexAPos2 55.5555555555556 create true
    1581 
    1582 Assigning LexAPos2 attribute to 12 items 
    1583 
    1584 > ui tool show "Render by Attribute"
    1585 
    1586 > key #fff051:20 #54518d:60 showTool true
    1587 
    1588 > ui mousemode right "color key"
    1589 
    1590 > ui mousemode right translate
    1591 
    1592 > color byattribute r:LexAPos2 #4#!1-3,5-8 target abcs palette
    1593 > 20,#fff051:60,#54518d noValueColor white
    1594 
    1595 532020 atoms, 87726 residues, atom LexAPos2 range 23 to 56.8 
    1596 
    1597 > setattr #1/A,B,C,D,E,F res LexAPos2 31.1111111111111 create true
    1598 
    1599 Assigning LexAPos2 attribute to 936 items 
    1600 
    1601 > setattr #1/G,H,K,L,O,P res LexAPos2 47.3333333333333 create true
    1602 
    1603 Assigning LexAPos2 attribute to 930 items 
    1604 
    1605 > setattr #2/A,E,I,M,Q,U res LexAPos2 52.4579380139152 create true
    1606 
    1607 Assigning LexAPos2 attribute to 6684 items 
    1608 
    1609 > setattr #2/B,F,J,N,R,V res LexAPos2 36.6666666666667 create true
    1610 
    1611 Assigning LexAPos2 attribute to 6702 items 
    1612 
    1613 > setattr #2/C,G,K,O,S,W res LexAPos2 30 create true
    1614 
    1615 Assigning LexAPos2 attribute to 8160 items 
    1616 
    1617 > setattr #2/D,H,L,P,T,X res LexAPos2 45.0537634408602 create true
    1618 
    1619 Assigning LexAPos2 attribute to 8940 items 
    1620 
    1621 > setattr #3/A,F,K,P,U,Z res LexAPos2 42.8560188827695 create true
    1622 
    1623 Assigning LexAPos2 attribute to 618 items 
    1624 
    1625 > setattr #3/D,I,N,S,X,c res LexAPos2 45.8333333333333 create true
    1626 
    1627 Assigning LexAPos2 attribute to 36 items 
    1628 
    1629 > setattr #3/E,J,O,T,Y,d res LexAPos2 49.0752688172043 create true
    1630 
    1631 Assigning LexAPos2 attribute to 5262 items 
    1632 
    1633 > setattr #4/A,C,E res LexAPos2 49.8139880952381 create true
    1634 
    1635 Assigning LexAPos2 attribute to 30 items 
    1636 
    1637 > setattr #4/B,D,F res LexAPos2 45.4039342117559 create true
    1638 
    1639 Assigning LexAPos2 attribute to 30 items 
    1640 
    1641 > setattr #5/A,E,I,M,Q,U,Y,c,g,k,o,s res LexAPos2 50.2240143369176 create true
    1642 
    1643 Assigning LexAPos2 attribute to 7452 items 
    1644 
    1645 > setattr #5/B,F,J,N,R,V,Z,d,h,l,p,t res LexAPos2 25.1238188334963 create true
    1646 
    1647 Assigning LexAPos2 attribute to 2016 items 
    1648 
    1649 > setattr #5/C,G,K,O,S,W,a,e,i,m,q,u res LexAPos2 52.7993348115299 create true
    1650 
    1651 Assigning LexAPos2 attribute to 2088 items 
    1652 
    1653 > setattr #6/C,H,M res LexAPos2 56.8225806451613 create true
    1654 
    1655 Assigning LexAPos2 attribute to 24 items 
    1656 
    1657 > setattr #6/D,E,I,J,N,O:76-276 res LexAPos2 23.010752688172 create true
    1658 
    1659 Assigning LexAPos2 attribute to 30 items 
    1660 
    1661 > setattr #7/C,D,K,L,S,T res LexAPos2 45.0309139784946 create true
    1662 
    1663 Assigning LexAPos2 attribute to 3660 items 
    1664 
    1665 > setattr #7/E,F,M,N,U,V res LexAPos2 50.4838709677419 create true
    1666 
    1667 Assigning LexAPos2 attribute to 1170 items 
    1668 
    1669 > setattr #7/G,H,O,P,W,X res LexAPos2 25.1238188334963 create true
    1670 
    1671 Assigning LexAPos2 attribute to 984 items 
    1672 
    1673 > setattr #8/A,H,O,V,c,j res LexAPos2 32.5 create true
    1674 
    1675 Assigning LexAPos2 attribute to 3894 items 
    1676 
    1677 > setattr #8/B,I,P,W,d,k res LexAPos2 30 create true
    1678 
    1679 Assigning LexAPos2 attribute to 3702 items 
    1680 
    1681 > setattr #8/D,K,R,Y,f,m res LexAPos2 41.8279569892473 create true
    1682 
    1683 Assigning LexAPos2 attribute to 6186 items 
    1684 
    1685 > setattr #8/E,L,S,Z,g,n res LexAPos2 39.6989247311828 create true
    1686 
    1687 Assigning LexAPos2 attribute to 3186 items 
    1688 
    1689 > setattr #6/D,E,I,J,N,O:326-375 res LexAPos2 55.5555555555556 create true
    1690 
    1691 Assigning LexAPos2 attribute to 12 items 
    1692 
    1693 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    1694 
    1695 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    1696 
    1697 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    1698 
    1699 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    1700 
    1701 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    1702 
    1703 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    1704 
    1705 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    1706 
    1707 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    1708 
    1709 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    1710 
    1711 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    1712 
    1713 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    1714 
    1715 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    1716 
    1717 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    1718 
    1719 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    1720 
    1721 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    1722 
    1723 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    1724 
    1725 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    1726 
    1727 > color zone #27 near #4 distance 60 sharpEdges true
    1728 
    1729 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    1730 
    1731 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    1732 
    1733 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    1734 
    1735 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    1736 
    1737 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    1738 
    1739 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    1740 
    1741 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    1742 
    1743 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    1744 
    1745 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    1746 
    1747 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    1748 
    1749 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    1750 
    1751 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    1752 
    1753 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    1754 
    1755 > color zone #41 near #7 distance 60 sharpEdges true
    1756 
    1757 > color zone #42 near #8 distance 60 sharpEdges true
    1758 
    1759 > color zone #43 near #8 distance 60 sharpEdges true
    1760 
    1761 > save
    1762 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Brickner_Heat_Map_Session_LexA_3-spoke_Y-
    1763 > P_fullseq.png width 2827 height 2160 supersample 4
    1764 
    1765 > ui tool show "Render by Attribute"
    1766 
    1767 > key #fff051:20 #343c7c:60 showTool true
    1768 
    1769 > ui mousemode right "color key"
    1770 
    1771 > ui mousemode right translate
    1772 
    1773 > color byattribute r:LexAPos2 #4#!1-3,5-8 target abcs palette
    1774 > 20,#fff051:60,#343c7c noValueColor white
    1775 
    1776 532020 atoms, 87726 residues, atom LexAPos2 range 23 to 56.8 
    1777 
    1778 > save
    1779 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Brickner_Heat_Map_Session_LexA_3-spoke_Y-
    1780 > Pdark_fullseq.png width 2827 height 2160 supersample 4
    1781 
    1782 > ui tool show "Render by Attribute"
    1783 
    1784 > key reds-3 :20 :40 :60 showTool true
    1785 
    1786 > ui mousemode right "color key"
    1787 
    1788 > ui mousemode right translate
    1789 
    1790 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    1791 > 20,#fee0d2:40,#fc9272:60,#de2d26 noValueColor grey
    1792 
    1793 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    1794 
    1795 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    1796 
    1797 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    1798 
    1799 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    1800 
    1801 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    1802 
    1803 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    1804 
    1805 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    1806 
    1807 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    1808 
    1809 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    1810 
    1811 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    1812 
    1813 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    1814 
    1815 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    1816 
    1817 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    1818 
    1819 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    1820 
    1821 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    1822 
    1823 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    1824 
    1825 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    1826 
    1827 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    1828 
    1829 > color zone #27 near #4 distance 60 sharpEdges true
    1830 
    1831 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    1832 
    1833 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    1834 
    1835 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    1836 
    1837 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    1838 
    1839 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    1840 
    1841 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    1842 
    1843 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    1844 
    1845 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    1846 
    1847 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    1848 
    1849 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    1850 
    1851 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    1852 
    1853 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    1854 
    1855 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    1856 
    1857 > color zone #41 near #7 distance 60 sharpEdges true
    1858 
    1859 > color zone #42 near #8 distance 60 sharpEdges true
    1860 
    1861 > color zone #43 near #8 distance 60 sharpEdges true
    1862 
    1863 > volume #27 color silver
    1864 
    1865 > ui tool show "Render by Attribute"
    1866 
    1867 > key reds-3 :20 :40 :60 showTool true
    1868 
    1869 > ui mousemode right "color key"
    1870 
    1871 > ui mousemode right translate
    1872 
    1873 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    1874 > 20,#fee0d2:40,#fc9272:60,#de2d26 noValueColor silver
    1875 
    1876 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    1877 
    1878 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    1879 
    1880 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    1881 
    1882 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    1883 
    1884 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    1885 
    1886 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    1887 
    1888 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    1889 
    1890 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    1891 
    1892 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    1893 
    1894 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    1895 
    1896 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    1897 
    1898 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    1899 
    1900 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    1901 
    1902 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    1903 
    1904 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    1905 
    1906 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    1907 
    1908 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    1909 
    1910 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    1911 
    1912 > color zone #27 near #4 distance 60 sharpEdges true
    1913 
    1914 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    1915 
    1916 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    1917 
    1918 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    1919 
    1920 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    1921 
    1922 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    1923 
    1924 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    1925 
    1926 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    1927 
    1928 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    1929 
    1930 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    1931 
    1932 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    1933 
    1934 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    1935 
    1936 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    1937 
    1938 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    1939 
    1940 > color zone #41 near #7 distance 60 sharpEdges true
    1941 
    1942 > color zone #42 near #8 distance 60 sharpEdges true
    1943 
    1944 > color zone #43 near #8 distance 60 sharpEdges true
    1945 
    1946 > save
    1947 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Brickner_Heat_Map_Session_LexA_3-spoke_Reds.png
    1948 > width 2827 height 2160 supersample 4
    1949 
    1950 > save
    1951 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Brickner_Heat_Map_Session_LexA_3-spoke_Reds_PNGTEST.png
    1952 > width 2827 height 2160 supersample 4
    1953 
    1954 > save
    1955 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Brickner_Heat_Map_Session_LexA_3-spoke_Reds_TIFFTEST.tif
    1956 > width 2827 height 2160 supersample 4
    1957 
    1958 > ui tool show "Render by Attribute"
    1959 
    1960 > key white:20 #ffe6e6:40 red:60 showTool true
    1961 
    1962 > ui mousemode right "color key"
    1963 
    1964 > ui mousemode right translate
    1965 
    1966 > key white:20 red:60 showTool true
    1967 
    1968 > ui mousemode right "color key"
    1969 
    1970 > ui mousemode right translate
    1971 
    1972 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette 20,white:60,red
    1973 > noValueColor silver
    1974 
    1975 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    1976 
    1977 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    1978 
    1979 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    1980 
    1981 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    1982 
    1983 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    1984 
    1985 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    1986 
    1987 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    1988 
    1989 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    1990 
    1991 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    1992 
    1993 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    1994 
    1995 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    1996 
    1997 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    1998 
    1999 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    2000 
    2001 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    2002 
    2003 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    2004 
    2005 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    2006 
    2007 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    2008 
    2009 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    2010 
    2011 > color zone #27 near #4 distance 60 sharpEdges true
    2012 
    2013 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    2014 
    2015 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    2016 
    2017 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    2018 
    2019 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    2020 
    2021 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    2022 
    2023 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    2024 
    2025 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    2026 
    2027 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    2028 
    2029 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    2030 
    2031 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    2032 
    2033 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    2034 
    2035 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    2036 
    2037 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    2038 
    2039 > color zone #41 near #7 distance 60 sharpEdges true
    2040 
    2041 > color zone #42 near #8 distance 60 sharpEdges true
    2042 
    2043 > color zone #43 near #8 distance 60 sharpEdges true
    2044 
    2045 > ui tool show "Render by Attribute"
    2046 
    2047 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    2048 > 20,#fee0d2:60,#de2d26 noValueColor silver
    2049 
    2050 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    2051 
    2052 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    2053 
    2054 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    2055 
    2056 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    2057 
    2058 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    2059 
    2060 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    2061 
    2062 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    2063 
    2064 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    2065 
    2066 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    2067 
    2068 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    2069 
    2070 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    2071 
    2072 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    2073 
    2074 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    2075 
    2076 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    2077 
    2078 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    2079 
    2080 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    2081 
    2082 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    2083 
    2084 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    2085 
    2086 > color zone #27 near #4 distance 60 sharpEdges true
    2087 
    2088 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    2089 
    2090 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    2091 
    2092 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    2093 
    2094 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    2095 
    2096 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    2097 
    2098 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    2099 
    2100 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    2101 
    2102 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    2103 
    2104 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    2105 
    2106 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    2107 
    2108 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    2109 
    2110 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    2111 
    2112 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    2113 
    2114 > color zone #41 near #7 distance 60 sharpEdges true
    2115 
    2116 > color zone #42 near #8 distance 60 sharpEdges true
    2117 
    2118 > color zone #43 near #8 distance 60 sharpEdges true
    2119 
    2120 > save
    2121 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Brickner_Heat_Map_Session_LexA_3-spoke_Reds2.png
    2122 > width 2827 height 2160 supersample 4
    2123 
    2124 > ui tool show "Render by Attribute"
    2125 
    2126 > key #fee0d2:20 red:60 showTool true
    2127 
    2128 > ui mousemode right "color key"
    2129 
    2130 > ui mousemode right translate
    2131 
    2132 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    2133 > 20,#fee0d2:60,red noValueColor silver
    2134 
    2135 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    2136 
    2137 > save
    2138 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Brickner_Heat_Map_Session_LexA_3-spoke_Reds3.png
    2139 > width 2827 height 2160 supersample 4
    2140 
    2141 > ui tool show "Render by Attribute"
    2142 
    2143 > key white:20 red:60 showTool true
    2144 
    2145 > ui mousemode right "color key"
    2146 
    2147 > ui mousemode right translate
    2148 
    2149 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette 20,white:60,red
    2150 > noValueColor silver
    2151 
    2152 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    2153 
    2154 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    2155 
    2156 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    2157 
    2158 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    2159 
    2160 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    2161 
    2162 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    2163 
    2164 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    2165 
    2166 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    2167 
    2168 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    2169 
    2170 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    2171 
    2172 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    2173 
    2174 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    2175 
    2176 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    2177 
    2178 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    2179 
    2180 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    2181 
    2182 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    2183 
    2184 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    2185 
    2186 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    2187 
    2188 > color zone #27 near #4 distance 60 sharpEdges true
    2189 
    2190 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    2191 
    2192 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    2193 
    2194 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    2195 
    2196 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    2197 
    2198 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    2199 
    2200 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    2201 
    2202 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    2203 
    2204 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    2205 
    2206 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    2207 
    2208 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    2209 
    2210 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    2211 
    2212 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    2213 
    2214 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    2215 
    2216 > color zone #41 near #7 distance 60 sharpEdges true
    2217 
    2218 > color zone #42 near #8 distance 60 sharpEdges true
    2219 
    2220 > color zone #43 near #8 distance 60 sharpEdges true
    2221 
    2222 > save
    2223 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Brickner_Heat_Map_Session_LexA_3-spoke_Reds4.png
    2224 > width 2827 height 2160 supersample 4
    2225 
    2226 > ui tool show "Render by Attribute"
    2227 
    2228 [Repeated 1 time(s)]
    2229 
    2230 > key #fee0d2:20 red:60 showTool true
    2231 
    2232 > ui mousemode right "color key"
    2233 
    2234 > ui mousemode right translate
    2235 
    2236 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    2237 > 20,#fee0d2:60,red noValueColor silver
    2238 
    2239 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    2240 
    2241 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    2242 
    2243 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    2244 
    2245 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    2246 
    2247 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    2248 
    2249 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    2250 
    2251 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    2252 
    2253 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    2254 
    2255 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    2256 
    2257 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    2258 
    2259 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    2260 
    2261 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    2262 
    2263 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    2264 
    2265 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    2266 
    2267 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    2268 
    2269 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    2270 
    2271 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    2272 
    2273 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    2274 
    2275 > color zone #27 near #4 distance 60 sharpEdges true
    2276 
    2277 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    2278 
    2279 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    2280 
    2281 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    2282 
    2283 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    2284 
    2285 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    2286 
    2287 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    2288 
    2289 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    2290 
    2291 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    2292 
    2293 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    2294 
    2295 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    2296 
    2297 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    2298 
    2299 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    2300 
    2301 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    2302 
    2303 > color zone #41 near #7 distance 60 sharpEdges true
    2304 
    2305 > color zone #42 near #8 distance 60 sharpEdges true
    2306 
    2307 > color zone #43 near #8 distance 60 sharpEdges true
    2308 
    2309 > save
    2310 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Brickner_Heat_Map_Session_LexA_3-spoke_Reds5.png
    2311 > width 2827 height 2160 supersample 3
    2312 
    2313 > save
    2314 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Brickner_Heat_Map_Session_LexA_3-spoke_Reds5.png
    2315 > width 2827 height 2160 supersample 4
    2316 
    2317 > ui tool show "Render by Attribute"
    2318 
    2319 > key white:20 red:60 showTool true
    2320 
    2321 > ui mousemode right "color key"
    2322 
    2323 > ui mousemode right translate
    2324 
    2325 > key white:20 red:60 showTool true
    2326 
    2327 > ui mousemode right "color key"
    2328 
    2329 > ui mousemode right translate
    2330 
    2331 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette 20,white:60,red
    2332 > noValueColor silver
    2333 
    2334 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    2335 
    2336 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    2337 
    2338 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    2339 
    2340 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    2341 
    2342 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    2343 
    2344 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    2345 
    2346 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    2347 
    2348 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    2349 
    2350 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    2351 
    2352 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    2353 
    2354 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    2355 
    2356 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    2357 
    2358 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    2359 
    2360 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    2361 
    2362 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    2363 
    2364 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    2365 
    2366 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    2367 
    2368 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    2369 
    2370 > color zone #27 near #4 distance 60 sharpEdges true
    2371 
    2372 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    2373 
    2374 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    2375 
    2376 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    2377 
    2378 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    2379 
    2380 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    2381 
    2382 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    2383 
    2384 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    2385 
    2386 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    2387 
    2388 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    2389 
    2390 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    2391 
    2392 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    2393 
    2394 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    2395 
    2396 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    2397 
    2398 > color zone #41 near #7 distance 60 sharpEdges true
    2399 
    2400 > color zone #42 near #8 distance 60 sharpEdges true
    2401 
    2402 > color zone #43 near #8 distance 60 sharpEdges true
    2403 
    2404 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    2405 
    2406 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    2407 
    2408 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    2409 
    2410 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    2411 
    2412 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    2413 
    2414 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    2415 
    2416 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    2417 
    2418 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    2419 
    2420 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    2421 
    2422 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    2423 
    2424 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    2425 
    2426 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    2427 
    2428 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    2429 
    2430 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    2431 
    2432 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    2433 
    2434 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    2435 
    2436 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    2437 
    2438 > color zone #27 near #4 distance 60 sharpEdges true
    2439 
    2440 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    2441 
    2442 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    2443 
    2444 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    2445 
    2446 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    2447 
    2448 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    2449 
    2450 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    2451 
    2452 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    2453 
    2454 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    2455 
    2456 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    2457 
    2458 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    2459 
    2460 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    2461 
    2462 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    2463 
    2464 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    2465 
    2466 > color zone #41 near #7 distance 60 sharpEdges true
    2467 
    2468 > color zone #42 near #8 distance 60 sharpEdges true
    2469 
    2470 > color zone #43 near #8 distance 60 sharpEdges true
    2471 
    2472 > save
    2473 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Brickner_Heat_Map_Session_LexA_3-spoke_Reds6.png
    2474 > width 2827 height 2160 supersample 4
    2475 
    2476 > ui tool show "Color Key"
    2477 
    2478 > ui mousemode right "color key"
    2479 
    2480 > ui mousemode right translate
    2481 
    2482 > ui tool show "Render by Attribute"
    2483 
    2484 > key #fee0d2:20.0 #fee0d2:39.9 red:40.0 red:60.0 showTool true
    2485 
    2486 > ui mousemode right "color key"
    2487 
    2488 > ui mousemode right translate
    2489 
    2490 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    2491 > 20,#fee0d2:39.9,#fee0d2:40,red:60,red noValueColor silver
    2492 
    2493 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    2494 
    2495 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    2496 
    2497 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    2498 
    2499 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    2500 
    2501 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    2502 
    2503 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    2504 
    2505 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    2506 
    2507 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    2508 
    2509 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    2510 
    2511 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    2512 
    2513 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    2514 
    2515 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    2516 
    2517 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    2518 
    2519 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    2520 
    2521 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    2522 
    2523 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    2524 
    2525 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    2526 
    2527 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    2528 
    2529 > color zone #27 near #4 distance 60 sharpEdges true
    2530 
    2531 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    2532 
    2533 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    2534 
    2535 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    2536 
    2537 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    2538 
    2539 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    2540 
    2541 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    2542 
    2543 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    2544 
    2545 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    2546 
    2547 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    2548 
    2549 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    2550 
    2551 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    2552 
    2553 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    2554 
    2555 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    2556 
    2557 > color zone #41 near #7 distance 60 sharpEdges true
    2558 
    2559 > color zone #42 near #8 distance 60 sharpEdges true
    2560 
    2561 > color zone #43 near #8 distance 60 sharpEdges true
    2562 
    2563 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    2564 
    2565 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    2566 
    2567 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    2568 
    2569 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    2570 
    2571 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    2572 
    2573 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    2574 
    2575 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    2576 
    2577 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    2578 
    2579 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    2580 
    2581 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    2582 
    2583 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    2584 
    2585 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    2586 
    2587 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    2588 
    2589 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    2590 
    2591 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    2592 
    2593 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    2594 
    2595 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    2596 
    2597 > color zone #27 near #4 distance 60 sharpEdges true
    2598 
    2599 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    2600 
    2601 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    2602 
    2603 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    2604 
    2605 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    2606 
    2607 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    2608 
    2609 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    2610 
    2611 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    2612 
    2613 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    2614 
    2615 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    2616 
    2617 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    2618 
    2619 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    2620 
    2621 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    2622 
    2623 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    2624 
    2625 > color zone #41 near #7 distance 60 sharpEdges true
    2626 
    2627 > color zone #42 near #8 distance 60 sharpEdges true
    2628 
    2629 > color zone #43 near #8 distance 60 sharpEdges true
    2630 
    2631 > ui tool show "Color Key"
    2632 
    2633 > ui mousemode right "color key"
    2634 
    2635 > ui mousemode right translate
    2636 
    2637 > ui tool show "Render by Attribute"
    2638 
    2639 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    2640 > 23.0108,#fee0d0:39.9167,#fee0d0:56.8226,#de2d26 noValueColor silver
    2641 
    2642 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    2643 
    2644 > key #fee0d0:23.0 #fee0d0:39.9 #de2d26:56.8 showTool true
    2645 
    2646 > ui mousemode right "color key"
    2647 
    2648 > ui mousemode right translate
    2649 
    2650 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    2651 > 23.0108,#fee0d0:39.9167,#fee0d0:56.8226,#de2d26 noValueColor silver
    2652 
    2653 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    2654 
    2655 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    2656 
    2657 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    2658 
    2659 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    2660 
    2661 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    2662 
    2663 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    2664 
    2665 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    2666 
    2667 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    2668 
    2669 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    2670 
    2671 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    2672 
    2673 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    2674 
    2675 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    2676 
    2677 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    2678 
    2679 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    2680 
    2681 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    2682 
    2683 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    2684 
    2685 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    2686 
    2687 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    2688 
    2689 > color zone #27 near #4 distance 60 sharpEdges true
    2690 
    2691 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    2692 
    2693 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    2694 
    2695 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    2696 
    2697 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    2698 
    2699 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    2700 
    2701 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    2702 
    2703 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    2704 
    2705 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    2706 
    2707 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    2708 
    2709 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    2710 
    2711 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    2712 
    2713 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    2714 
    2715 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    2716 
    2717 > color zone #41 near #7 distance 60 sharpEdges true
    2718 
    2719 > color zone #42 near #8 distance 60 sharpEdges true
    2720 
    2721 > color zone #43 near #8 distance 60 sharpEdges true
    2722 
    2723 > ui tool show "Color Key"
    2724 
    2725 > ui mousemode right "color key"
    2726 
    2727 > key #fffff1:23.0 #fee0d0:39.9 #de2d26:56.8
    2728 
    2729 > ui mousemode right translate
    2730 
    2731 > hide #!10-43 target m
    2732 
    2733 > show #4#!1-3,5-8 target m
    2734 
    2735 > ui tool show "Render by Attribute"
    2736 
    2737 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    2738 > 23.0108,blue:39.9167,white:56.8226,red
    2739 
    2740 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    2741 
    2742 > ui tool show "Render by Attribute"
    2743 
    2744 > key reds-3 :23.0 :39.9 :56.8 showTool true
    2745 
    2746 > ui mousemode right "color key"
    2747 
    2748 > ui mousemode right translate
    2749 
    2750 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    2751 > 23.0108,#fee0d2:39.9167,#fc9272:56.8226,#de2d26
    2752 
    2753 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    2754 
    2755 > key reds-3 :0.01 :2.06 :4.10 showTool true
    2756 
    2757 > ui mousemode right "color key"
    2758 
    2759 > ui mousemode right translate
    2760 
    2761 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2762 > 0.0138491,#fee0d2:2.05762,#fc9272:4.10139,#de2d26
    2763 
    2764 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2765 
    2766 > key reds-3 :0.00 :2.05 :4.10 showTool true
    2767 
    2768 > ui mousemode right "color key"
    2769 
    2770 > ui mousemode right translate
    2771 
    2772 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2773 > 0,#fee0d2:2.0507,#fc9272:4.10139,#de2d26
    2774 
    2775 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2776 
    2777 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2778 > 0,#fee0d2:2.0507,#fc9272:4.10139,#de2d26
    2779 
    2780 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2781 
    2782 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2783 > 0,#7fc97f:2.0507,#beaed4:4.10139,#fdc086
    2784 
    2785 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2786 
    2787 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2788 > 0,#fee0d2:2.0507,#fc9272:4.10139,#de2d26
    2789 
    2790 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2791 
    2792 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2793 > 0,#fee0d0:2.0507,white:4.10139,red
    2794 
    2795 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2796 
    2797 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2798 > 0,#bf0900:2.0507,white:4.10139,red
    2799 
    2800 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2801 
    2802 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2803 > 0,#fee0d0:2.0507,white:4.10139,red
    2804 
    2805 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2806 
    2807 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2808 > 0,#fee1db:2.0507,white:4.10139,red
    2809 
    2810 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2811 
    2812 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2813 > 0,#fee1db:2.0507,white:4.10139,red
    2814 
    2815 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2816 
    2817 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2818 > 0,#fbecba:2.0507,white:4.10139,red
    2819 
    2820 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2821 
    2822 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2823 > 0,#c3fbbb:2.0507,white:4.10139,red
    2824 
    2825 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2826 
    2827 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2828 > 0,#b5fbf1:2.0507,white:4.10139,red
    2829 
    2830 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2831 
    2832 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2833 > 0,#fbf7c3:2.0507,white:4.10139,red
    2834 
    2835 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2836 
    2837 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2838 > 0,#fbded3:2.0507,white:4.10139,red
    2839 
    2840 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2841 
    2842 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2843 > 0,#fbdff9:2.0507,white:4.10139,red
    2844 
    2845 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2846 
    2847 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2848 > 0,#cdd0fb:2.0507,white:4.10139,red
    2849 
    2850 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2851 
    2852 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2853 > 0,#fbb6f1:2.0507,white:4.10139,red
    2854 
    2855 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2856 
    2857 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2858 > 0,#fbd4f2:2.0507,white:4.10139,red
    2859 
    2860 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2861 
    2862 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2863 > 0,#fff7ff:2.0507,white:4.10139,red
    2864 
    2865 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2866 
    2867 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2868 > 0,#bbcded:2.0507,white:4.10139,red
    2869 
    2870 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2871 
    2872 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2873 > 0,#ffbfba:2.0507,white:4.10139,red
    2874 
    2875 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2876 
    2877 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2878 > 0,#ffe0da:4.10139,red
    2879 
    2880 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2881 
    2882 > key #ffe0da:0.0 red:4.1 showTool true
    2883 
    2884 > ui mousemode right "color key"
    2885 
    2886 > key colorTreatment distinct
    2887 
    2888 > key colorTreatment blended
    2889 
    2890 www.colourlovers.com failed to respond 
    2891 
    2892 > ui mousemode right translate
    2893 
    2894 > ui tool show "Render by Attribute"
    2895 
    2896 [Repeated 1 time(s)]
    2897 
    2898 > key #ff7e79:0.00 #ff2600:2.05 #941100:4.10 showTool true
    2899 
    2900 > ui mousemode right "color key"
    2901 
    2902 > ui mousemode right translate
    2903 
    2904 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2905 > 0,#ff7e79:2.0507,#ff2600:4.10139,#941100
    2906 
    2907 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2908 
    2909 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2910 > 0,#0fc7cf:2.0507,#b2b2b2:4.10139,#9e205e
    2911 
    2912 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2913 
    2914 > key cyan-gray-maroon :0.00 :2.05 :4.10 showTool true
    2915 
    2916 > ui mousemode right "color key"
    2917 
    2918 > ui mousemode right translate
    2919 
    2920 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2921 > 0,#0fc7cf:2.0507,#b2b2b2:4.10139,#9e205e
    2922 
    2923 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2924 
    2925 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2926 > 0,#fee0d2:2.0507,#fc9272:4.10139,#de2d26
    2927 
    2928 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2929 
    2930 > key reds-3 :0.00 :2.05 :4.10 showTool true
    2931 
    2932 > ui mousemode right "color key"
    2933 
    2934 > ui mousemode right translate
    2935 
    2936 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2937 > 0,#fee0d2:2.0507,#fc9272:4.10139,#de2d26
    2938 
    2939 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2940 
    2941 > ui tool show "Render by Attribute"
    2942 
    2943 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2944 > 0.0138491,#deebf7:2.05762,#9ecae1:4.10139,#3182bd
    2945 
    2946 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2947 
    2948 > key blues-3 :0.01 :2.06 :4.10 showTool true
    2949 
    2950 > ui mousemode right "color key"
    2951 
    2952 > ui mousemode right translate
    2953 
    2954 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2955 > 0.01,#deebf7:2.0557,#9ecae1:4.10139,#3182bd
    2956 
    2957 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2958 
    2959 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2960 > 0.01,#3182bd:2.0557,#9ecae1:4.10139,#deebf7
    2961 
    2962 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2963 
    2964 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    2965 > 0.01,#de2d26:2.0557,#fc9272:4.10139,#fee0d2
    2966 
    2967 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    2968 
    2969 > ui tool show "Render by Attribute"
    2970 
    2971 [Repeated 1 time(s)]
    2972 
    2973 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    2974 > 23.0108,blue:39.9167,white:56.8226,red
    2975 
    2976 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    2977 
    2978 > key blue-white-red :23.0 :39.9 :56.8 showTool true
    2979 
    2980 > ui mousemode right "color key"
    2981 
    2982 > ui mousemode right translate
    2983 
    2984 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    2985 > 23.0108,#0433ff:39.1865,#0433ff:40.3211,#ff2600:56.8226,red
    2986 
    2987 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    2988 
    2989 > key #0433ff:23.0 #0433ff:39.2 #ff2600:40.3 red:56.8 showTool true
    2990 
    2991 > ui mousemode right "color key"
    2992 
    2993 > ui mousemode right translate
    2994 
    2995 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    2996 > 23.0108,#0433ff:39.1865,#0433ff:40.3211,#ff2600:56.8226,red
    2997 
    2998 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    2999 
    3000 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    3001 > 20,#0433ff:41.7258,#0433ff:42.8121,#ff2600:60,red
    3002 
    3003 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    3004 
    3005 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    3006 > 20,#0433ff:41.7258,#0433ff:42.8121,#ff2600:60,red
    3007 
    3008 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    3009 
    3010 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    3011 > 20,#0433ff:40,#0433ff:41,#ff2600:60,red
    3012 
    3013 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    3014 
    3015 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    3016 > 20,#0433ff:40,#0433ff:41,#ff2600:60,red
    3017 
    3018 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    3019 
    3020 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    3021 > 20,#ff7e79:40,#ff7e79:41,#ff2600:60,red
    3022 
    3023 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    3024 
    3025 > key #ff7e79:20 #ff7e79:40 #ff2600:41 red:60 showTool true
    3026 
    3027 > ui mousemode right "color key"
    3028 
    3029 > ui mousemode right translate
    3030 
    3031 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    3032 > 20,#ff7e79:40,#ff7e79:41,#ff2600:60,red
    3033 
    3034 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    3035 
    3036 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    3037 > 20,#ff7e79:40,#ff7e79:41,#ff2600:60,red
    3038 
    3039 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    3040 
    3041 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    3042 > 20,#ff7e79:40,#ff7e79:41,#ff2600:60,red
    3043 
    3044 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    3045 
    3046 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    3047 > 20,#fee0d0:40,#ff7e79:41,#ff2600:60,red
    3048 
    3049 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    3050 
    3051 > key #fee0d0:20 #ff7e79:40 #ff2600:41 red:60 showTool true
    3052 
    3053 > ui mousemode right "color key"
    3054 
    3055 > ui mousemode right translate
    3056 
    3057 > key #fee0d0:20 #fee0d0:40 #ff2600:41 red:60 showTool true
    3058 
    3059 > ui mousemode right "color key"
    3060 
    3061 > ui mousemode right translate
    3062 
    3063 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    3064 > 20,#fee0d0:40,#fee0d0:41,#ff2600:60,red
    3065 
    3066 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    3067 
    3068 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    3069 > 20,#fee0d0:40,#fee0d0:41,#ff2600:60,red noValueColor grey
    3070 
    3071 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    3072 
    3073 > key #fee0d0:20 #fee0d0:40 #ff2600:41 red:60 showTool true
    3074 
    3075 > ui mousemode right "color key"
    3076 
    3077 > key labelColor #bfbfbf
    3078 
    3079 > key labelColor default
    3080 
    3081 > ui mousemode right translate
    3082 
    3083 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    3084 > 20,#fee0d0:40,#fee0d0:41,#ff2600:60,red noValueColor grey
    3085 
    3086 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    3087 
    3088 > ui tool show "Color Key"
    3089 
    3090 > ui mousemode right "color key"
    3091 
    3092 > key #fee0d0:20 #fffff1:40 #ff2600:41 red:60
    3093 
    3094 > key #fffff1:20 #fffff1:40 #ff2600:41 red:60
    3095 
    3096 > ui mousemode right translate
    3097 
    3098 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    3099 
    3100 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    3101 
    3102 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    3103 
    3104 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    3105 
    3106 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    3107 
    3108 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    3109 
    3110 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    3111 
    3112 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    3113 
    3114 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    3115 
    3116 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    3117 
    3118 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    3119 
    3120 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    3121 
    3122 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    3123 
    3124 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    3125 
    3126 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    3127 
    3128 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    3129 
    3130 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    3131 
    3132 > color zone #27 near #4 distance 60 sharpEdges true
    3133 
    3134 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    3135 
    3136 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    3137 
    3138 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    3139 
    3140 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    3141 
    3142 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    3143 
    3144 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    3145 
    3146 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    3147 
    3148 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    3149 
    3150 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    3151 
    3152 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    3153 
    3154 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    3155 
    3156 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    3157 
    3158 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    3159 
    3160 > color zone #41 near #7 distance 60 sharpEdges true
    3161 
    3162 > color zone #42 near #8 distance 60 sharpEdges true
    3163 
    3164 > color zone #43 near #8 distance 60 sharpEdges true
    3165 
    3166 > hide #4#!1-3,5-8 target m
    3167 
    3168 > show #!10-43 target m
    3169 
    3170 > ui tool show "Render by Attribute"
    3171 
    3172 > key #fee0d0:20 #fee0d0:40 #ff2600:41 #ff2600:60 showTool true
    3173 
    3174 > ui mousemode right "color key"
    3175 
    3176 > ui mousemode right translate
    3177 
    3178 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    3179 > 20,#fee0d0:40,#fee0d0:41,#ff2600:60,#ff2600 noValueColor silver
    3180 
    3181 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    3182 
    3183 > key #fee0d0:20 #fee0d0:40 #ff2600:41 #ff2600:60 showTool true
    3184 
    3185 > ui mousemode right "color key"
    3186 
    3187 > ui mousemode right translate
    3188 
    3189 > color byattribute r:LexAPos1 #4#!1-3,5-8 target abcs palette
    3190 > 20,#fee0d0:40,#fee0d0:41,#ff2600:60,#ff2600 noValueColor silver
    3191 
    3192 532020 atoms, 87726 residues, atom LexAPos1 range 23 to 56.8 
    3193 
    3194 > color zone #10 near #1/A,C,E distance 60 sharpEdges true
    3195 
    3196 > color zone #11 near #1/B,D,F distance 60 sharpEdges true
    3197 
    3198 > color zone #12 near #1/G,K,O distance 60 sharpEdges true
    3199 
    3200 > color zone #13 near #1/H,L,P distance 60 sharpEdges true
    3201 
    3202 > color zone #14 near #1/I,M,Q distance 60 sharpEdges true
    3203 
    3204 > color zone #15 near #1/J,N,R distance 60 sharpEdges true
    3205 
    3206 > color zone #16 near #2/A,E,I,M,Q,U distance 60 sharpEdges true
    3207 
    3208 > color zone #17 near #2/B,F,J,N,R,V distance 60 sharpEdges true
    3209 
    3210 > color zone #18 near #2/C,G,K,O,S,W distance 60 sharpEdges true
    3211 
    3212 > color zone #19 near #2/D,H,L,P,T,X distance 60 sharpEdges true
    3213 
    3214 > color zone #20 near #3/A,F,K,P,U,Z distance 60 sharpEdges true
    3215 
    3216 > color zone #21 near #3/B,G,L,Q,V,a distance 60 sharpEdges true
    3217 
    3218 > color zone #22 near #3/C,H,M,R,W,b distance 60 sharpEdges true
    3219 
    3220 > color zone #23 near #3/D,I,N,S,X,c distance 60 sharpEdges true
    3221 
    3222 > color zone #24 near #3/E,J,O,T,Y,d distance 60 sharpEdges true
    3223 
    3224 > color zone #25 near #4/A,C,E distance 60 sharpEdges true
    3225 
    3226 > color zone #26 near #4/B,D,F distance 60 sharpEdges true
    3227 
    3228 > color zone #27 near #4 distance 60 sharpEdges true
    3229 
    3230 > color zone #28 near #5/A,I,Q,Y,g,o distance 60 sharpEdges true
    3231 
    3232 > color zone #29 near #5/B,J,R,Z,h,p distance 60 sharpEdges true
    3233 
    3234 > color zone #30 near #5/C,K,S,a,i,q distance 60 sharpEdges true
    3235 
    3236 > color zone #31 near #5/D,L,T,b,j,r distance 60 sharpEdges true
    3237 
    3238 > color zone #32 near #5/E,M,U,c,k,s distance 60 sharpEdges true
    3239 
    3240 > color zone #33 near #5/F,N,V,d,l,t distance 60 sharpEdges true
    3241 
    3242 > color zone #34 near #5/G,O,W,e,m,u distance 60 sharpEdges true
    3243 
    3244 > color zone #35 near #5/H,P,X,f,n,v distance 60 sharpEdges true
    3245 
    3246 > color zone #36 near #6/A,F,K distance 60 sharpEdges true
    3247 
    3248 > color zone #37 near #6/B,G,L distance 60 sharpEdges true
    3249 
    3250 > color zone #38 near #6/C,H,M distance 60 sharpEdges true
    3251 
    3252 > color zone #39 near #6/D,I,N distance 60 sharpEdges true
    3253 
    3254 > color zone #40 near #6/E,J,O distance 60 sharpEdges true
    3255 
    3256 > color zone #41 near #7 distance 60 sharpEdges true
    3257 
    3258 > color zone #42 near #8 distance 60 sharpEdges true
    3259 
    3260 > color zone #43 near #8 distance 60 sharpEdges true
    3261 
    3262 > ui tool show "Color Key"
    3263 
    3264 > ui mousemode right "color key"
    3265 
    3266 > key #fffff1:20 #fee0d0:40 #ff2600:41 #ff2600:60
    3267 
    3268 > key #fffff1:20 #fffff1:40 #ff2600:41 #ff2600:60
    3269 
    3270 > ui mousemode right translate
    3271 
    3272 > save
    3273 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/2024_0506_Brickner_Heat_Map_Session_LexA_3-spoke_Reds7.png
    3274 > width 2827 height 2160 supersample 4
    3275 
    3276 > hide #!10-43 target m
    3277 
    3278 > show #4#!1-3,5-8 target m
    3279 
    3280 > ui tool show "Render by Attribute"
    3281 
    3282 > key reds-3 :0.01 :2.06 :4.10 showTool true
    3283 
    3284 > ui mousemode right "color key"
    3285 
    3286 > ui mousemode right translate
    3287 
    3288 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    3289 > 0.0138491,#fee0d2:2.05762,#fc9272:4.10139,#de2d26
    3290 
    3291 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    3292 
    3293 > key ivory:0.01 #fc9272:2.06 #de2d26:4.10 showTool true
    3294 
    3295 > ui mousemode right "color key"
    3296 
    3297 > ui mousemode right translate
    3298 
    3299 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    3300 > 0.0138491,#fee0d2:0.237917,#fc9272:4.10139,#de2d26
    3301 
    3302 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    3303 
    3304 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    3305 > 0.0138491,#fee0d2:0.102118,#fc9272:4.10139,#de2d26
    3306 
    3307 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    3308 
    3309 > key reds-3 :0.01 :0.10 :4.10 showTool true
    3310 
    3311 > ui mousemode right "color key"
    3312 
    3313 > ui mousemode right translate
    3314 
    3315 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    3316 > 0,#fee0d2:0.0885683,#fc9272:4.10139,#de2d26
    3317 
    3318 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    3319 
    3320 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    3321 > 0,#fee0d2:2.03707,#fc9272:4.10139,#de2d26
    3322 
    3323 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    3324 
    3325 > key reds-3 :0.00 :2.04 :4.10 showTool true
    3326 
    3327 > ui mousemode right "color key"
    3328 
    3329 > ui mousemode right translate
    3330 
    3331 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    3332 > 0,#fee0d2:2.03707,#ffffef:4.10139,#de2d26
    3333 
    3334 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    3335 
    3336 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    3337 > 0.0953813,#fee0d2:2.03707,#ffffef:4.10139,#de2d26
    3338 
    3339 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    3340 
    3341 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    3342 > 0.23164,#fee0d2:2.03707,#ffffef:4.10139,#de2d26
    3343 
    3344 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    3345 
    3346 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    3347 > 0.0272518,#fee0d2:2.03707,#ffffef:4.10139,#de2d26
    3348 
    3349 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    3350 
    3351 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    3352 > 0,#fee0d2:2.03707,#ffffef:4.10139,#de2d26
    3353 
    3354 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    3355 
    3356 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    3357 > 0,#fee0d2:2.03707,#fee0d0:4.10139,#fee0d0
    3358 
    3359 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    3360 
    3361 > ui tool show "Render by Attribute"
    3362 
    3363 > key #fee0d2:0.01 #fee0d2:2.06 #fee0d2:4.10 showTool true
    3364 
    3365 > ui mousemode right "color key"
    3366 
    3367 > ui mousemode right translate
    3368 
    3369 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    3370 > 0.0138491,#fee0d2:2.05762,#fee0d2:4.10139,#fee0d2
    3371 
    3372 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    3373 
    3374 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    3375 > 0.0138491,#fee0d2:2.05762,#fee0d2:4.10139,#fee0d2 noValueColor grey
    3376 
    3377 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    3378 
    3379 > color byattribute r:Nup2NLFQ #4#!1-3,5-8 target abcs palette
    3380 > 0.0138491,#fee0d2:2.05762,#fee0d2:4.10139,#fee0d2 noValueColor grey
    3381 
    3382 532020 atoms, 87726 residues, atom Nup2NLFQ range 0.0138 to 4.1 
    3383 
    3384 > save
    3385 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/Render-
    3386 > by-Attribute_test.png width 780 height 890 supersample 3
    3387 
    3388 > ui tool show "Render by Attribute"
    3389 
    3390 > save
    3391 > /Users/chris/Documents/Rockefeller/Rout_Lab/Brickner_JH/2024_0506_Brickner_JH_ChimeraX_HeatMap_Sessions/Render-
    3392 > by-Attribute_test.png width 1893 height 2160 supersample 4
    3393 
    33947
    33958