| 1279 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1280 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1281 | | cget(self._c_pointers, n, pointer(values)) |
| 1282 | | |
| 1283 | | See log for complete Python traceback. |
| 1284 | | |
| 1285 | | Traceback (most recent call last): |
| 1286 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1287 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 1288 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 1289 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1290 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 1291 | | mouse_pause_tracking |
| 1292 | | self._mouse_pause() |
| 1293 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1294 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 1295 | | m.pause(self._mouse_pause_position) |
| 1296 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1297 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 1298 | | p = self.view.picked_object(x, y) |
| 1299 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1300 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1301 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 1302 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 1303 | | beyond, |
| 1304 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1305 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1306 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 1307 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1308 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1309 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1310 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 1311 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 1312 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1313 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1314 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 1315 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 1316 | | exclude=exclude) |
| 1317 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1318 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1319 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 1320 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 1321 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1322 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1323 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 1324 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 1325 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1326 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1327 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 1328 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1329 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1330 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1331 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 1332 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 1333 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1334 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1335 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 1336 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 1337 | | ^^^^^^^^^ |
| 1338 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1339 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1340 | | cget(self._c_pointers, n, pointer(values)) |
| 1341 | | ValueError: no active coordinate set |
| 1342 | | |
| 1343 | | ValueError: no active coordinate set |
| 1344 | | |
| 1345 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1346 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1347 | | cget(self._c_pointers, n, pointer(values)) |
| 1348 | | |
| 1349 | | See log for complete Python traceback. |
| 1350 | | |
| 1351 | | Traceback (most recent call last): |
| 1352 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1353 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 1354 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 1355 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1356 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 1357 | | mouse_pause_tracking |
| 1358 | | self._mouse_pause() |
| 1359 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1360 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 1361 | | m.pause(self._mouse_pause_position) |
| 1362 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1363 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 1364 | | p = self.view.picked_object(x, y) |
| 1365 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1366 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1367 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 1368 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 1369 | | beyond, |
| 1370 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1371 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1372 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 1373 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1374 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1375 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1376 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 1377 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 1378 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1379 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1380 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 1381 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 1382 | | exclude=exclude) |
| 1383 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1384 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1385 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 1386 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 1387 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1388 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1389 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 1390 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 1391 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1392 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1393 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 1394 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1395 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1396 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1397 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 1398 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 1399 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1400 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1401 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 1402 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 1403 | | ^^^^^^^^^ |
| 1404 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1405 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1406 | | cget(self._c_pointers, n, pointer(values)) |
| 1407 | | ValueError: no active coordinate set |
| 1408 | | |
| 1409 | | ValueError: no active coordinate set |
| 1410 | | |
| 1411 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1412 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1413 | | cget(self._c_pointers, n, pointer(values)) |
| 1414 | | |
| 1415 | | See log for complete Python traceback. |
| 1416 | | |
| 1417 | | Traceback (most recent call last): |
| 1418 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1419 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 1420 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 1421 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1422 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 1423 | | mouse_pause_tracking |
| 1424 | | self._mouse_pause() |
| 1425 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1426 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 1427 | | m.pause(self._mouse_pause_position) |
| 1428 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1429 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 1430 | | p = self.view.picked_object(x, y) |
| 1431 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1432 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1433 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 1434 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 1435 | | beyond, |
| 1436 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1437 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1438 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 1439 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1440 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1441 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1442 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 1443 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 1444 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1445 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1446 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 1447 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 1448 | | exclude=exclude) |
| 1449 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1450 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1451 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 1452 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 1453 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1454 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1455 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 1456 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 1457 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1458 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1459 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 1460 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1461 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1462 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1463 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 1464 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 1465 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1466 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1467 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 1468 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 1469 | | ^^^^^^^^^ |
| 1470 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1471 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1472 | | cget(self._c_pointers, n, pointer(values)) |
| 1473 | | ValueError: no active coordinate set |
| 1474 | | |
| 1475 | | ValueError: no active coordinate set |
| 1476 | | |
| 1477 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1478 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1479 | | cget(self._c_pointers, n, pointer(values)) |
| 1480 | | |
| 1481 | | See log for complete Python traceback. |
| 1482 | | |
| 1483 | | Traceback (most recent call last): |
| 1484 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1485 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 1486 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 1487 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1488 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 1489 | | mouse_pause_tracking |
| 1490 | | self._mouse_pause() |
| 1491 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1492 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 1493 | | m.pause(self._mouse_pause_position) |
| 1494 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1495 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 1496 | | p = self.view.picked_object(x, y) |
| 1497 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1498 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1499 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 1500 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 1501 | | beyond, |
| 1502 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1503 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1504 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 1505 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1506 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1507 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1508 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 1509 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 1510 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1511 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1512 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 1513 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 1514 | | exclude=exclude) |
| 1515 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1516 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1517 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 1518 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 1519 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1520 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1521 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 1522 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 1523 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1524 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1525 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 1526 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1527 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1528 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1529 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 1530 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 1531 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1532 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1533 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 1534 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 1535 | | ^^^^^^^^^ |
| 1536 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1537 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1538 | | cget(self._c_pointers, n, pointer(values)) |
| 1539 | | ValueError: no active coordinate set |
| 1540 | | |
| 1541 | | ValueError: no active coordinate set |
| 1542 | | |
| 1543 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1544 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1545 | | cget(self._c_pointers, n, pointer(values)) |
| 1546 | | |
| 1547 | | See log for complete Python traceback. |
| 1548 | | |
| 1549 | | Traceback (most recent call last): |
| 1550 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1551 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 1552 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 1553 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1554 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 1555 | | mouse_pause_tracking |
| 1556 | | self._mouse_pause() |
| 1557 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1558 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 1559 | | m.pause(self._mouse_pause_position) |
| 1560 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1561 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 1562 | | p = self.view.picked_object(x, y) |
| 1563 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1564 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1565 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 1566 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 1567 | | beyond, |
| 1568 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1569 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1570 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 1571 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1572 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1573 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1574 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 1575 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 1576 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1577 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1578 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 1579 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 1580 | | exclude=exclude) |
| 1581 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1582 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1583 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 1584 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 1585 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1586 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1587 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 1588 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 1589 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1590 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1591 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 1592 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1593 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1594 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1595 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 1596 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 1597 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1598 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1599 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 1600 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 1601 | | ^^^^^^^^^ |
| 1602 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1603 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1604 | | cget(self._c_pointers, n, pointer(values)) |
| 1605 | | ValueError: no active coordinate set |
| 1606 | | |
| 1607 | | ValueError: no active coordinate set |
| 1608 | | |
| 1609 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1610 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1611 | | cget(self._c_pointers, n, pointer(values)) |
| 1612 | | |
| 1613 | | See log for complete Python traceback. |
| 1614 | | |
| 1615 | | Traceback (most recent call last): |
| 1616 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1617 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 1618 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 1619 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1620 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 1621 | | mouse_pause_tracking |
| 1622 | | self._mouse_pause() |
| 1623 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1624 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 1625 | | m.pause(self._mouse_pause_position) |
| 1626 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1627 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 1628 | | p = self.view.picked_object(x, y) |
| 1629 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1630 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1631 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 1632 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 1633 | | beyond, |
| 1634 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1635 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1636 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 1637 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1638 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1639 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1640 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 1641 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 1642 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1643 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1644 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 1645 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 1646 | | exclude=exclude) |
| 1647 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1648 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1649 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 1650 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 1651 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1652 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1653 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 1654 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 1655 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1656 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1657 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 1658 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1659 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1660 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1661 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 1662 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 1663 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1664 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1665 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 1666 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 1667 | | ^^^^^^^^^ |
| 1668 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1669 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1670 | | cget(self._c_pointers, n, pointer(values)) |
| 1671 | | ValueError: no active coordinate set |
| 1672 | | |
| 1673 | | ValueError: no active coordinate set |
| 1674 | | |
| 1675 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1676 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1677 | | cget(self._c_pointers, n, pointer(values)) |
| 1678 | | |
| 1679 | | See log for complete Python traceback. |
| 1680 | | |
| 1681 | | Traceback (most recent call last): |
| 1682 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1683 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 1684 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 1685 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1686 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 1687 | | mouse_pause_tracking |
| 1688 | | self._mouse_pause() |
| 1689 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1690 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 1691 | | m.pause(self._mouse_pause_position) |
| 1692 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1693 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 1694 | | p = self.view.picked_object(x, y) |
| 1695 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1696 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1697 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 1698 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 1699 | | beyond, |
| 1700 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1701 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1702 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 1703 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1704 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1705 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1706 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 1707 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 1708 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1709 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1710 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 1711 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 1712 | | exclude=exclude) |
| 1713 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1714 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1715 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 1716 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 1717 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1718 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1719 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 1720 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 1721 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1722 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1723 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 1724 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1725 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1726 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1727 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 1728 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 1729 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1730 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1731 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 1732 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 1733 | | ^^^^^^^^^ |
| 1734 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1735 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1736 | | cget(self._c_pointers, n, pointer(values)) |
| 1737 | | ValueError: no active coordinate set |
| 1738 | | |
| 1739 | | ValueError: no active coordinate set |
| 1740 | | |
| 1741 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1742 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1743 | | cget(self._c_pointers, n, pointer(values)) |
| 1744 | | |
| 1745 | | See log for complete Python traceback. |
| 1746 | | |
| 1747 | | Traceback (most recent call last): |
| 1748 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1749 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 1750 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 1751 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1752 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 1753 | | mouse_pause_tracking |
| 1754 | | self._mouse_pause() |
| 1755 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1756 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 1757 | | m.pause(self._mouse_pause_position) |
| 1758 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1759 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 1760 | | p = self.view.picked_object(x, y) |
| 1761 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1762 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1763 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 1764 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 1765 | | beyond, |
| 1766 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1767 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1768 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 1769 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1770 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1771 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1772 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 1773 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 1774 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1775 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1776 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 1777 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 1778 | | exclude=exclude) |
| 1779 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1780 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1781 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 1782 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 1783 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1784 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1785 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 1786 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 1787 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1788 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1789 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 1790 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1791 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1792 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1793 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 1794 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 1795 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1796 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1797 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 1798 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 1799 | | ^^^^^^^^^ |
| 1800 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1801 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1802 | | cget(self._c_pointers, n, pointer(values)) |
| 1803 | | ValueError: no active coordinate set |
| 1804 | | |
| 1805 | | ValueError: no active coordinate set |
| 1806 | | |
| 1807 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1808 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1809 | | cget(self._c_pointers, n, pointer(values)) |
| 1810 | | |
| 1811 | | See log for complete Python traceback. |
| 1812 | | |
| 1813 | | Traceback (most recent call last): |
| 1814 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1815 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 1816 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 1817 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1818 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 1819 | | mouse_pause_tracking |
| 1820 | | self._mouse_pause() |
| 1821 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1822 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 1823 | | m.pause(self._mouse_pause_position) |
| 1824 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1825 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 1826 | | p = self.view.picked_object(x, y) |
| 1827 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1828 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1829 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 1830 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 1831 | | beyond, |
| 1832 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1833 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1834 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 1835 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1836 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1837 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1838 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 1839 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 1840 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1841 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1842 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 1843 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 1844 | | exclude=exclude) |
| 1845 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1846 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1847 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 1848 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 1849 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1850 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1851 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 1852 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 1853 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1854 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1855 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 1856 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1857 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1858 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1859 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 1860 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 1861 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1862 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1863 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 1864 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 1865 | | ^^^^^^^^^ |
| 1866 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1867 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1868 | | cget(self._c_pointers, n, pointer(values)) |
| 1869 | | ValueError: no active coordinate set |
| 1870 | | |
| 1871 | | ValueError: no active coordinate set |
| 1872 | | |
| 1873 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1874 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1875 | | cget(self._c_pointers, n, pointer(values)) |
| 1876 | | |
| 1877 | | See log for complete Python traceback. |
| 1878 | | |
| 1879 | | Traceback (most recent call last): |
| 1880 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1881 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 1882 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 1883 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1884 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 1885 | | mouse_pause_tracking |
| 1886 | | self._mouse_pause() |
| 1887 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1888 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 1889 | | m.pause(self._mouse_pause_position) |
| 1890 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1891 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 1892 | | p = self.view.picked_object(x, y) |
| 1893 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1894 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1895 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 1896 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 1897 | | beyond, |
| 1898 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1899 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1900 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 1901 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1902 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1903 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1904 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 1905 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 1906 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1907 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1908 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 1909 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 1910 | | exclude=exclude) |
| 1911 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1912 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1913 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 1914 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 1915 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1916 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1917 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 1918 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 1919 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1920 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1921 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 1922 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1923 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1924 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1925 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 1926 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 1927 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1928 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1929 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 1930 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 1931 | | ^^^^^^^^^ |
| 1932 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1933 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1934 | | cget(self._c_pointers, n, pointer(values)) |
| 1935 | | ValueError: no active coordinate set |
| 1936 | | |
| 1937 | | ValueError: no active coordinate set |
| 1938 | | |
| 1939 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1940 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 1941 | | cget(self._c_pointers, n, pointer(values)) |
| 1942 | | |
| 1943 | | See log for complete Python traceback. |
| 1944 | | |
| 1945 | | Traceback (most recent call last): |
| 1946 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1947 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 1948 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 1949 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1950 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 1951 | | mouse_pause_tracking |
| 1952 | | self._mouse_pause() |
| 1953 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1954 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 1955 | | m.pause(self._mouse_pause_position) |
| 1956 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1957 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 1958 | | p = self.view.picked_object(x, y) |
| 1959 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1960 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1961 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 1962 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 1963 | | beyond, |
| 1964 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1965 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1966 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 1967 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1968 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1969 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1970 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 1971 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 1972 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1973 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1974 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 1975 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 1976 | | exclude=exclude) |
| 1977 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1978 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1979 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 1980 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 1981 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1982 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1983 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 1984 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 1985 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1986 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1987 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 1988 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 1989 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1990 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1991 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 1992 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 1993 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 1994 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1995 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 1996 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 1997 | | ^^^^^^^^^ |
| 1998 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 1999 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2000 | | cget(self._c_pointers, n, pointer(values)) |
| 2001 | | ValueError: no active coordinate set |
| 2002 | | |
| 2003 | | ValueError: no active coordinate set |
| 2004 | | |
| 2005 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2006 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2007 | | cget(self._c_pointers, n, pointer(values)) |
| 2008 | | |
| 2009 | | See log for complete Python traceback. |
| 2010 | | |
| 2011 | | Traceback (most recent call last): |
| 2012 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2013 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 2014 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 2015 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2016 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 2017 | | mouse_pause_tracking |
| 2018 | | self._mouse_pause() |
| 2019 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2020 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 2021 | | m.pause(self._mouse_pause_position) |
| 2022 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2023 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 2024 | | p = self.view.picked_object(x, y) |
| 2025 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2026 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2027 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 2028 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 2029 | | beyond, |
| 2030 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2031 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2032 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 2033 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2034 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2035 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2036 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 2037 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 2038 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2039 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2040 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 2041 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 2042 | | exclude=exclude) |
| 2043 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2044 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2045 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 2046 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 2047 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2048 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2049 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 2050 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 2051 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2052 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2053 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 2054 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2055 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2056 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2057 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 2058 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 2059 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2060 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2061 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 2062 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 2063 | | ^^^^^^^^^ |
| 2064 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2065 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2066 | | cget(self._c_pointers, n, pointer(values)) |
| 2067 | | ValueError: no active coordinate set |
| 2068 | | |
| 2069 | | ValueError: no active coordinate set |
| 2070 | | |
| 2071 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2072 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2073 | | cget(self._c_pointers, n, pointer(values)) |
| 2074 | | |
| 2075 | | See log for complete Python traceback. |
| 2076 | | |
| 2077 | | Traceback (most recent call last): |
| 2078 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2079 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 2080 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 2081 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2082 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 2083 | | mouse_pause_tracking |
| 2084 | | self._mouse_pause() |
| 2085 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2086 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 2087 | | m.pause(self._mouse_pause_position) |
| 2088 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2089 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 2090 | | p = self.view.picked_object(x, y) |
| 2091 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2092 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2093 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 2094 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 2095 | | beyond, |
| 2096 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2097 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2098 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 2099 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2100 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2101 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2102 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 2103 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 2104 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2105 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2106 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 2107 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 2108 | | exclude=exclude) |
| 2109 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2110 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2111 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 2112 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 2113 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2114 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2115 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 2116 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 2117 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2118 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2119 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 2120 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2121 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2122 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2123 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 2124 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 2125 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2126 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2127 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 2128 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 2129 | | ^^^^^^^^^ |
| 2130 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2131 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2132 | | cget(self._c_pointers, n, pointer(values)) |
| 2133 | | ValueError: no active coordinate set |
| 2134 | | |
| 2135 | | ValueError: no active coordinate set |
| 2136 | | |
| 2137 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2138 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2139 | | cget(self._c_pointers, n, pointer(values)) |
| 2140 | | |
| 2141 | | See log for complete Python traceback. |
| 2142 | | |
| 2143 | | Traceback (most recent call last): |
| 2144 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2145 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 2146 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 2147 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2148 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 2149 | | mouse_pause_tracking |
| 2150 | | self._mouse_pause() |
| 2151 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2152 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 2153 | | m.pause(self._mouse_pause_position) |
| 2154 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2155 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 2156 | | p = self.view.picked_object(x, y) |
| 2157 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2158 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2159 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 2160 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 2161 | | beyond, |
| 2162 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2163 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2164 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 2165 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2166 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2167 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2168 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 2169 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 2170 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2171 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2172 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 2173 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 2174 | | exclude=exclude) |
| 2175 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2176 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2177 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 2178 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 2179 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2180 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2181 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 2182 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 2183 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2184 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2185 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 2186 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2187 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2188 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2189 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 2190 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 2191 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2192 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2193 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 2194 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 2195 | | ^^^^^^^^^ |
| 2196 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2197 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2198 | | cget(self._c_pointers, n, pointer(values)) |
| 2199 | | ValueError: no active coordinate set |
| 2200 | | |
| 2201 | | ValueError: no active coordinate set |
| 2202 | | |
| 2203 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2204 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2205 | | cget(self._c_pointers, n, pointer(values)) |
| 2206 | | |
| 2207 | | See log for complete Python traceback. |
| 2208 | | |
| 2209 | | Traceback (most recent call last): |
| 2210 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2211 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 2212 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 2213 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2214 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 2215 | | mouse_pause_tracking |
| 2216 | | self._mouse_pause() |
| 2217 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2218 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 2219 | | m.pause(self._mouse_pause_position) |
| 2220 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2221 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 2222 | | p = self.view.picked_object(x, y) |
| 2223 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2224 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2225 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 2226 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 2227 | | beyond, |
| 2228 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2229 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2230 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 2231 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2232 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2233 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2234 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 2235 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 2236 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2237 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2238 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 2239 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 2240 | | exclude=exclude) |
| 2241 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2242 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2243 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 2244 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 2245 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2246 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2247 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 2248 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 2249 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2250 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2251 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 2252 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2253 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2254 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2255 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 2256 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 2257 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2258 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2259 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 2260 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 2261 | | ^^^^^^^^^ |
| 2262 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2263 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2264 | | cget(self._c_pointers, n, pointer(values)) |
| 2265 | | ValueError: no active coordinate set |
| 2266 | | |
| 2267 | | ValueError: no active coordinate set |
| 2268 | | |
| 2269 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2270 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2271 | | cget(self._c_pointers, n, pointer(values)) |
| 2272 | | |
| 2273 | | See log for complete Python traceback. |
| 2274 | | |
| 2275 | | Traceback (most recent call last): |
| 2276 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2277 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 2278 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 2279 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2280 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 2281 | | mouse_pause_tracking |
| 2282 | | self._mouse_pause() |
| 2283 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2284 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 2285 | | m.pause(self._mouse_pause_position) |
| 2286 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2287 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 2288 | | p = self.view.picked_object(x, y) |
| 2289 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2290 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2291 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 2292 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 2293 | | beyond, |
| 2294 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2295 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2296 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 2297 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2298 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2299 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2300 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 2301 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 2302 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2303 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2304 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 2305 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 2306 | | exclude=exclude) |
| 2307 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2308 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2309 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 2310 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 2311 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2312 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2313 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 2314 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 2315 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2316 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2317 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 2318 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2319 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2320 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2321 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 2322 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 2323 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2324 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2325 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 2326 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 2327 | | ^^^^^^^^^ |
| 2328 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2329 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2330 | | cget(self._c_pointers, n, pointer(values)) |
| 2331 | | ValueError: no active coordinate set |
| 2332 | | |
| 2333 | | ValueError: no active coordinate set |
| 2334 | | |
| 2335 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2336 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2337 | | cget(self._c_pointers, n, pointer(values)) |
| 2338 | | |
| 2339 | | See log for complete Python traceback. |
| 2340 | | |
| 2341 | | Traceback (most recent call last): |
| 2342 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2343 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 2344 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 2345 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2346 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 2347 | | mouse_pause_tracking |
| 2348 | | self._mouse_pause() |
| 2349 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2350 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 2351 | | m.pause(self._mouse_pause_position) |
| 2352 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2353 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 2354 | | p = self.view.picked_object(x, y) |
| 2355 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2356 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2357 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 2358 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 2359 | | beyond, |
| 2360 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2361 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2362 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 2363 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2364 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2365 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2366 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 2367 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 2368 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2369 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2370 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 2371 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 2372 | | exclude=exclude) |
| 2373 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2374 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2375 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 2376 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 2377 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2378 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2379 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 2380 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 2381 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2382 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2383 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 2384 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2385 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2386 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2387 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 2388 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 2389 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2390 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2391 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 2392 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 2393 | | ^^^^^^^^^ |
| 2394 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2395 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2396 | | cget(self._c_pointers, n, pointer(values)) |
| 2397 | | ValueError: no active coordinate set |
| 2398 | | |
| 2399 | | ValueError: no active coordinate set |
| 2400 | | |
| 2401 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2402 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2403 | | cget(self._c_pointers, n, pointer(values)) |
| 2404 | | |
| 2405 | | See log for complete Python traceback. |
| 2406 | | |
| 2407 | | Traceback (most recent call last): |
| 2408 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2409 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 2410 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 2411 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2412 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 2413 | | mouse_pause_tracking |
| 2414 | | self._mouse_pause() |
| 2415 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2416 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 2417 | | m.pause(self._mouse_pause_position) |
| 2418 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2419 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 2420 | | p = self.view.picked_object(x, y) |
| 2421 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2422 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2423 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 2424 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 2425 | | beyond, |
| 2426 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2427 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2428 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 2429 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2430 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2431 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2432 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 2433 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 2434 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2435 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2436 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 2437 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 2438 | | exclude=exclude) |
| 2439 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2440 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2441 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 2442 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 2443 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2444 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2445 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 2446 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 2447 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2448 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2449 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 2450 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2451 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2452 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2453 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 2454 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 2455 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2456 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2457 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 2458 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 2459 | | ^^^^^^^^^ |
| 2460 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2461 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2462 | | cget(self._c_pointers, n, pointer(values)) |
| 2463 | | ValueError: no active coordinate set |
| 2464 | | |
| 2465 | | ValueError: no active coordinate set |
| 2466 | | |
| 2467 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2468 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2469 | | cget(self._c_pointers, n, pointer(values)) |
| 2470 | | |
| 2471 | | See log for complete Python traceback. |
| 2472 | | |
| 2473 | | Traceback (most recent call last): |
| 2474 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2475 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 2476 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 2477 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2478 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 2479 | | mouse_pause_tracking |
| 2480 | | self._mouse_pause() |
| 2481 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2482 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 2483 | | m.pause(self._mouse_pause_position) |
| 2484 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2485 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 2486 | | p = self.view.picked_object(x, y) |
| 2487 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2488 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2489 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 2490 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 2491 | | beyond, |
| 2492 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2493 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2494 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 2495 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2496 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2497 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2498 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 2499 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 2500 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2501 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2502 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 2503 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 2504 | | exclude=exclude) |
| 2505 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2506 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2507 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 2508 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 2509 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2510 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2511 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 2512 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 2513 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2514 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2515 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 2516 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2517 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2518 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2519 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 2520 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 2521 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2522 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2523 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 2524 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 2525 | | ^^^^^^^^^ |
| 2526 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2527 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2528 | | cget(self._c_pointers, n, pointer(values)) |
| 2529 | | ValueError: no active coordinate set |
| 2530 | | |
| 2531 | | ValueError: no active coordinate set |
| 2532 | | |
| 2533 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2534 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2535 | | cget(self._c_pointers, n, pointer(values)) |
| 2536 | | |
| 2537 | | See log for complete Python traceback. |
| 2538 | | |
| 2539 | | Traceback (most recent call last): |
| 2540 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2541 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 2542 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 2543 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2544 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 2545 | | mouse_pause_tracking |
| 2546 | | self._mouse_pause() |
| 2547 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2548 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 2549 | | m.pause(self._mouse_pause_position) |
| 2550 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2551 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 2552 | | p = self.view.picked_object(x, y) |
| 2553 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2554 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2555 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 2556 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 2557 | | beyond, |
| 2558 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2559 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2560 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 2561 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2562 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2563 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2564 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 2565 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 2566 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2567 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2568 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 2569 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 2570 | | exclude=exclude) |
| 2571 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2572 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2573 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 2574 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 2575 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2576 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2577 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 2578 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 2579 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2580 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2581 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 2582 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2583 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2584 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2585 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 2586 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 2587 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2588 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2589 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 2590 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 2591 | | ^^^^^^^^^ |
| 2592 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2593 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2594 | | cget(self._c_pointers, n, pointer(values)) |
| 2595 | | ValueError: no active coordinate set |
| 2596 | | |
| 2597 | | ValueError: no active coordinate set |
| 2598 | | |
| 2599 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2600 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2601 | | cget(self._c_pointers, n, pointer(values)) |
| 2602 | | |
| 2603 | | See log for complete Python traceback. |
| 2604 | | |
| 2605 | | Traceback (most recent call last): |
| 2606 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2607 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 2608 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 2609 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2610 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 2611 | | mouse_pause_tracking |
| 2612 | | self._mouse_pause() |
| 2613 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2614 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 2615 | | m.pause(self._mouse_pause_position) |
| 2616 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2617 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 2618 | | p = self.view.picked_object(x, y) |
| 2619 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2620 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2621 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 2622 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 2623 | | beyond, |
| 2624 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2625 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2626 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 2627 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2628 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2629 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2630 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 2631 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 2632 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2633 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2634 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 2635 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 2636 | | exclude=exclude) |
| 2637 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2638 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2639 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 2640 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 2641 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2642 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2643 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 2644 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 2645 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2646 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2647 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 2648 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2649 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2650 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2651 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 2652 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 2653 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2654 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2655 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 2656 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 2657 | | ^^^^^^^^^ |
| 2658 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2659 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2660 | | cget(self._c_pointers, n, pointer(values)) |
| 2661 | | ValueError: no active coordinate set |
| 2662 | | |
| 2663 | | ValueError: no active coordinate set |
| 2664 | | |
| 2665 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2666 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2667 | | cget(self._c_pointers, n, pointer(values)) |
| 2668 | | |
| 2669 | | See log for complete Python traceback. |
| 2670 | | |
| 2671 | | Traceback (most recent call last): |
| 2672 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2673 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 2674 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 2675 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2676 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 2677 | | mouse_pause_tracking |
| 2678 | | self._mouse_pause() |
| 2679 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2680 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 2681 | | m.pause(self._mouse_pause_position) |
| 2682 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2683 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 2684 | | p = self.view.picked_object(x, y) |
| 2685 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2686 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2687 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 2688 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 2689 | | beyond, |
| 2690 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2691 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2692 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 2693 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2694 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2695 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2696 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 2697 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 2698 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2699 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2700 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 2701 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 2702 | | exclude=exclude) |
| 2703 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2704 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2705 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 2706 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 2707 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2708 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2709 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 2710 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 2711 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2712 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2713 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 2714 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2715 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2716 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2717 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 2718 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 2719 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2720 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2721 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 2722 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 2723 | | ^^^^^^^^^ |
| 2724 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2725 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2726 | | cget(self._c_pointers, n, pointer(values)) |
| 2727 | | ValueError: no active coordinate set |
| 2728 | | |
| 2729 | | ValueError: no active coordinate set |
| 2730 | | |
| 2731 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2732 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2733 | | cget(self._c_pointers, n, pointer(values)) |
| 2734 | | |
| 2735 | | See log for complete Python traceback. |
| 2736 | | |
| 2737 | | Traceback (most recent call last): |
| 2738 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2739 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 2740 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 2741 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2742 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 2743 | | mouse_pause_tracking |
| 2744 | | self._mouse_pause() |
| 2745 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2746 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 2747 | | m.pause(self._mouse_pause_position) |
| 2748 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2749 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 2750 | | p = self.view.picked_object(x, y) |
| 2751 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2752 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2753 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 2754 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 2755 | | beyond, |
| 2756 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2757 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2758 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 2759 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2760 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2761 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2762 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 2763 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 2764 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2765 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2766 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 2767 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 2768 | | exclude=exclude) |
| 2769 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2770 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2771 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 2772 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 2773 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2774 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2775 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 2776 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 2777 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2778 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2779 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 2780 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2781 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2782 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2783 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 2784 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 2785 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2786 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2787 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 2788 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 2789 | | ^^^^^^^^^ |
| 2790 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2791 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2792 | | cget(self._c_pointers, n, pointer(values)) |
| 2793 | | ValueError: no active coordinate set |
| 2794 | | |
| 2795 | | ValueError: no active coordinate set |
| 2796 | | |
| 2797 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2798 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2799 | | cget(self._c_pointers, n, pointer(values)) |
| 2800 | | |
| 2801 | | See log for complete Python traceback. |
| 2802 | | |
| 2803 | | Traceback (most recent call last): |
| 2804 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2805 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 2806 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 2807 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2808 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 2809 | | mouse_pause_tracking |
| 2810 | | self._mouse_pause() |
| 2811 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2812 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 2813 | | m.pause(self._mouse_pause_position) |
| 2814 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2815 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 2816 | | p = self.view.picked_object(x, y) |
| 2817 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2818 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2819 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 2820 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 2821 | | beyond, |
| 2822 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2823 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2824 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 2825 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2826 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2827 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2828 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 2829 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 2830 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2831 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2832 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 2833 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 2834 | | exclude=exclude) |
| 2835 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2836 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2837 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 2838 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 2839 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2840 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2841 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 2842 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 2843 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2844 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2845 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 2846 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2847 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2848 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2849 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 2850 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 2851 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2852 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2853 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 2854 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 2855 | | ^^^^^^^^^ |
| 2856 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2857 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2858 | | cget(self._c_pointers, n, pointer(values)) |
| 2859 | | ValueError: no active coordinate set |
| 2860 | | |
| 2861 | | ValueError: no active coordinate set |
| 2862 | | |
| 2863 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2864 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2865 | | cget(self._c_pointers, n, pointer(values)) |
| 2866 | | |
| 2867 | | See log for complete Python traceback. |
| 2868 | | |
| 2869 | | Traceback (most recent call last): |
| 2870 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2871 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 2872 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 2873 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2874 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 2875 | | mouse_pause_tracking |
| 2876 | | self._mouse_pause() |
| 2877 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2878 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 2879 | | m.pause(self._mouse_pause_position) |
| 2880 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2881 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 2882 | | p = self.view.picked_object(x, y) |
| 2883 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2884 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2885 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 2886 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 2887 | | beyond, |
| 2888 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2889 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2890 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 2891 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2892 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2893 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2894 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 2895 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 2896 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2897 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2898 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 2899 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 2900 | | exclude=exclude) |
| 2901 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2902 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2903 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 2904 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 2905 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2906 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2907 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 2908 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 2909 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2910 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2911 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 2912 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2913 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2914 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2915 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 2916 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 2917 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2918 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2919 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 2920 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 2921 | | ^^^^^^^^^ |
| 2922 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2923 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2924 | | cget(self._c_pointers, n, pointer(values)) |
| 2925 | | ValueError: no active coordinate set |
| 2926 | | |
| 2927 | | ValueError: no active coordinate set |
| 2928 | | |
| 2929 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2930 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2931 | | cget(self._c_pointers, n, pointer(values)) |
| 2932 | | |
| 2933 | | See log for complete Python traceback. |
| 2934 | | |
| 2935 | | Traceback (most recent call last): |
| 2936 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2937 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 2938 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 2939 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2940 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 2941 | | mouse_pause_tracking |
| 2942 | | self._mouse_pause() |
| 2943 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2944 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 2945 | | m.pause(self._mouse_pause_position) |
| 2946 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2947 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 2948 | | p = self.view.picked_object(x, y) |
| 2949 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2950 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2951 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 2952 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 2953 | | beyond, |
| 2954 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2955 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2956 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 2957 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2958 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2959 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2960 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 2961 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 2962 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2963 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2964 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 2965 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 2966 | | exclude=exclude) |
| 2967 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2968 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2969 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 2970 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 2971 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2972 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2973 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 2974 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 2975 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2976 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2977 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 2978 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 2979 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2980 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2981 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 2982 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 2983 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 2984 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2985 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 2986 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 2987 | | ^^^^^^^^^ |
| 2988 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2989 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2990 | | cget(self._c_pointers, n, pointer(values)) |
| 2991 | | ValueError: no active coordinate set |
| 2992 | | |
| 2993 | | ValueError: no active coordinate set |
| 2994 | | |
| 2995 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 2996 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 2997 | | cget(self._c_pointers, n, pointer(values)) |
| 2998 | | |
| 2999 | | See log for complete Python traceback. |
| 3000 | | |
| 3001 | | Traceback (most recent call last): |
| 3002 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3003 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3004 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3005 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3006 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3007 | | mouse_pause_tracking |
| 3008 | | self._mouse_pause() |
| 3009 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3010 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 3011 | | m.pause(self._mouse_pause_position) |
| 3012 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3013 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 3014 | | p = self.view.picked_object(x, y) |
| 3015 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3016 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3017 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 3018 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 3019 | | beyond, |
| 3020 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3021 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3022 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 3023 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3024 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3025 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3026 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 3027 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 3028 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3029 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3030 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 3031 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 3032 | | exclude=exclude) |
| 3033 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3034 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3035 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 3036 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 3037 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3038 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3039 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 3040 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 3041 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3042 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3043 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 3044 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3045 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3046 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3047 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 3048 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 3049 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3050 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3051 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 3052 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 3053 | | ^^^^^^^^^ |
| 3054 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3055 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3056 | | cget(self._c_pointers, n, pointer(values)) |
| 3057 | | ValueError: no active coordinate set |
| 3058 | | |
| 3059 | | ValueError: no active coordinate set |
| 3060 | | |
| 3061 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3062 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3063 | | cget(self._c_pointers, n, pointer(values)) |
| 3064 | | |
| 3065 | | See log for complete Python traceback. |
| 3066 | | |
| 3067 | | Traceback (most recent call last): |
| 3068 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3069 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3070 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3071 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3072 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3073 | | mouse_pause_tracking |
| 3074 | | self._mouse_pause() |
| 3075 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3076 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 3077 | | m.pause(self._mouse_pause_position) |
| 3078 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3079 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 3080 | | p = self.view.picked_object(x, y) |
| 3081 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3082 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3083 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 3084 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 3085 | | beyond, |
| 3086 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3087 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3088 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 3089 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3090 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3091 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3092 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 3093 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 3094 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3095 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3096 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 3097 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 3098 | | exclude=exclude) |
| 3099 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3100 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3101 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 3102 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 3103 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3104 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3105 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 3106 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 3107 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3108 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3109 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 3110 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3111 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3112 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3113 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 3114 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 3115 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3116 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3117 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 3118 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 3119 | | ^^^^^^^^^ |
| 3120 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3121 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3122 | | cget(self._c_pointers, n, pointer(values)) |
| 3123 | | ValueError: no active coordinate set |
| 3124 | | |
| 3125 | | ValueError: no active coordinate set |
| 3126 | | |
| 3127 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3128 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3129 | | cget(self._c_pointers, n, pointer(values)) |
| 3130 | | |
| 3131 | | See log for complete Python traceback. |
| 3132 | | |
| 3133 | | Traceback (most recent call last): |
| 3134 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3135 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3136 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3137 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3138 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3139 | | mouse_pause_tracking |
| 3140 | | self._mouse_pause() |
| 3141 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3142 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 3143 | | m.pause(self._mouse_pause_position) |
| 3144 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3145 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 3146 | | p = self.view.picked_object(x, y) |
| 3147 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3148 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3149 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 3150 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 3151 | | beyond, |
| 3152 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3153 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3154 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 3155 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3156 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3157 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3158 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 3159 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 3160 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3161 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3162 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 3163 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 3164 | | exclude=exclude) |
| 3165 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3166 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3167 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 3168 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 3169 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3170 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3171 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 3172 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 3173 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3174 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3175 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 3176 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3177 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3178 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3179 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 3180 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 3181 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3182 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3183 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 3184 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 3185 | | ^^^^^^^^^ |
| 3186 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3187 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3188 | | cget(self._c_pointers, n, pointer(values)) |
| 3189 | | ValueError: no active coordinate set |
| 3190 | | |
| 3191 | | ValueError: no active coordinate set |
| 3192 | | |
| 3193 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3194 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3195 | | cget(self._c_pointers, n, pointer(values)) |
| 3196 | | |
| 3197 | | See log for complete Python traceback. |
| 3198 | | |
| 3199 | | Traceback (most recent call last): |
| 3200 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3201 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3202 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3203 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3204 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3205 | | mouse_pause_tracking |
| 3206 | | self._mouse_pause() |
| 3207 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3208 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 3209 | | m.pause(self._mouse_pause_position) |
| 3210 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3211 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 3212 | | p = self.view.picked_object(x, y) |
| 3213 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3214 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3215 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 3216 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 3217 | | beyond, |
| 3218 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3219 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3220 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 3221 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3222 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3223 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3224 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 3225 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 3226 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3227 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3228 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 3229 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 3230 | | exclude=exclude) |
| 3231 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3232 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3233 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 3234 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 3235 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3236 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3237 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 3238 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 3239 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3240 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3241 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 3242 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3243 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3244 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3245 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 3246 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 3247 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3248 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3249 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 3250 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 3251 | | ^^^^^^^^^ |
| 3252 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3253 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3254 | | cget(self._c_pointers, n, pointer(values)) |
| 3255 | | ValueError: no active coordinate set |
| 3256 | | |
| 3257 | | ValueError: no active coordinate set |
| 3258 | | |
| 3259 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3260 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3261 | | cget(self._c_pointers, n, pointer(values)) |
| 3262 | | |
| 3263 | | See log for complete Python traceback. |
| 3264 | | |
| 3265 | | Traceback (most recent call last): |
| 3266 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3267 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3268 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3269 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3270 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3271 | | mouse_pause_tracking |
| 3272 | | self._mouse_pause() |
| 3273 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3274 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 3275 | | m.pause(self._mouse_pause_position) |
| 3276 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3277 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 3278 | | p = self.view.picked_object(x, y) |
| 3279 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3280 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3281 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 3282 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 3283 | | beyond, |
| 3284 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3285 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3286 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 3287 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3288 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3289 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3290 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 3291 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 3292 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3293 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3294 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 3295 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 3296 | | exclude=exclude) |
| 3297 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3298 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3299 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 3300 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 3301 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3302 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3303 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 3304 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 3305 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3306 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3307 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 3308 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3309 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3310 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3311 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 3312 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 3313 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3314 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3315 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 3316 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 3317 | | ^^^^^^^^^ |
| 3318 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3319 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3320 | | cget(self._c_pointers, n, pointer(values)) |
| 3321 | | ValueError: no active coordinate set |
| 3322 | | |
| 3323 | | ValueError: no active coordinate set |
| 3324 | | |
| 3325 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3326 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3327 | | cget(self._c_pointers, n, pointer(values)) |
| 3328 | | |
| 3329 | | See log for complete Python traceback. |
| 3330 | | |
| 3331 | | Traceback (most recent call last): |
| 3332 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3333 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3334 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3335 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3336 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3337 | | mouse_pause_tracking |
| 3338 | | self._mouse_pause() |
| 3339 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3340 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 3341 | | m.pause(self._mouse_pause_position) |
| 3342 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3343 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 3344 | | p = self.view.picked_object(x, y) |
| 3345 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3346 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3347 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 3348 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 3349 | | beyond, |
| 3350 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3351 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3352 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 3353 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3354 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3355 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3356 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 3357 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 3358 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3359 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3360 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 3361 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 3362 | | exclude=exclude) |
| 3363 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3364 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3365 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 3366 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 3367 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3368 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3369 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 3370 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 3371 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3372 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3373 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 3374 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3375 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3376 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3377 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 3378 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 3379 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3380 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3381 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 3382 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 3383 | | ^^^^^^^^^ |
| 3384 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3385 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3386 | | cget(self._c_pointers, n, pointer(values)) |
| 3387 | | ValueError: no active coordinate set |
| 3388 | | |
| 3389 | | ValueError: no active coordinate set |
| 3390 | | |
| 3391 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3392 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3393 | | cget(self._c_pointers, n, pointer(values)) |
| 3394 | | |
| 3395 | | See log for complete Python traceback. |
| 3396 | | |
| 3397 | | Traceback (most recent call last): |
| 3398 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3399 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3400 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3401 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3402 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3403 | | mouse_pause_tracking |
| 3404 | | self._mouse_pause() |
| 3405 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3406 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 3407 | | m.pause(self._mouse_pause_position) |
| 3408 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3409 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 3410 | | p = self.view.picked_object(x, y) |
| 3411 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3412 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3413 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 3414 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 3415 | | beyond, |
| 3416 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3417 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3418 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 3419 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3420 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3421 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3422 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 3423 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 3424 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3425 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3426 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 3427 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 3428 | | exclude=exclude) |
| 3429 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3430 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3431 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 3432 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 3433 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3434 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3435 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 3436 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 3437 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3438 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3439 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 3440 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3441 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3442 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3443 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 3444 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 3445 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3446 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3447 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 3448 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 3449 | | ^^^^^^^^^ |
| 3450 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3451 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3452 | | cget(self._c_pointers, n, pointer(values)) |
| 3453 | | ValueError: no active coordinate set |
| 3454 | | |
| 3455 | | ValueError: no active coordinate set |
| 3456 | | |
| 3457 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3458 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3459 | | cget(self._c_pointers, n, pointer(values)) |
| 3460 | | |
| 3461 | | See log for complete Python traceback. |
| 3462 | | |
| 3463 | | Traceback (most recent call last): |
| 3464 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3465 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3466 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3467 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3468 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3469 | | mouse_pause_tracking |
| 3470 | | self._mouse_pause() |
| 3471 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3472 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 3473 | | m.pause(self._mouse_pause_position) |
| 3474 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3475 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 3476 | | p = self.view.picked_object(x, y) |
| 3477 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3478 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3479 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 3480 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 3481 | | beyond, |
| 3482 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3483 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3484 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 3485 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3486 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3487 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3488 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 3489 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 3490 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3491 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3492 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 3493 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 3494 | | exclude=exclude) |
| 3495 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3496 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3497 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 3498 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 3499 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3500 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3501 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 3502 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 3503 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3504 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3505 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 3506 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3507 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3508 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3509 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 3510 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 3511 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3512 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3513 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 3514 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 3515 | | ^^^^^^^^^ |
| 3516 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3517 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3518 | | cget(self._c_pointers, n, pointer(values)) |
| 3519 | | ValueError: no active coordinate set |
| 3520 | | |
| 3521 | | ValueError: no active coordinate set |
| 3522 | | |
| 3523 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3524 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3525 | | cget(self._c_pointers, n, pointer(values)) |
| 3526 | | |
| 3527 | | See log for complete Python traceback. |
| 3528 | | |
| 3529 | | Traceback (most recent call last): |
| 3530 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3531 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3532 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3533 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3534 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3535 | | mouse_pause_tracking |
| 3536 | | self._mouse_pause() |
| 3537 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3538 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 3539 | | m.pause(self._mouse_pause_position) |
| 3540 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3541 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 3542 | | p = self.view.picked_object(x, y) |
| 3543 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3544 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3545 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 3546 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 3547 | | beyond, |
| 3548 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3549 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3550 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 3551 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3552 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3553 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3554 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 3555 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 3556 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3557 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3558 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 3559 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 3560 | | exclude=exclude) |
| 3561 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3562 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3563 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 3564 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 3565 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3566 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3567 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 3568 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 3569 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3570 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3571 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 3572 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3573 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3574 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3575 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 3576 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 3577 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3578 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3579 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 3580 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 3581 | | ^^^^^^^^^ |
| 3582 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3583 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3584 | | cget(self._c_pointers, n, pointer(values)) |
| 3585 | | ValueError: no active coordinate set |
| 3586 | | |
| 3587 | | ValueError: no active coordinate set |
| 3588 | | |
| 3589 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3590 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3591 | | cget(self._c_pointers, n, pointer(values)) |
| 3592 | | |
| 3593 | | See log for complete Python traceback. |
| 3594 | | |
| 3595 | | Traceback (most recent call last): |
| 3596 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3597 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3598 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3599 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3600 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3601 | | mouse_pause_tracking |
| 3602 | | self._mouse_pause() |
| 3603 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3604 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 3605 | | m.pause(self._mouse_pause_position) |
| 3606 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3607 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 3608 | | p = self.view.picked_object(x, y) |
| 3609 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3610 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3611 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 3612 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 3613 | | beyond, |
| 3614 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3615 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3616 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 3617 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3618 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3619 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3620 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 3621 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 3622 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3623 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3624 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 3625 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 3626 | | exclude=exclude) |
| 3627 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3628 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3629 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 3630 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 3631 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3632 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3633 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 3634 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 3635 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3636 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3637 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 3638 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3639 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3640 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3641 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 3642 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 3643 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3644 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3645 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 3646 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 3647 | | ^^^^^^^^^ |
| 3648 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3649 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3650 | | cget(self._c_pointers, n, pointer(values)) |
| 3651 | | ValueError: no active coordinate set |
| 3652 | | |
| 3653 | | ValueError: no active coordinate set |
| 3654 | | |
| 3655 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3656 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3657 | | cget(self._c_pointers, n, pointer(values)) |
| 3658 | | |
| 3659 | | See log for complete Python traceback. |
| 3660 | | |
| 3661 | | Traceback (most recent call last): |
| 3662 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3663 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3664 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3665 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3666 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3667 | | mouse_pause_tracking |
| 3668 | | self._mouse_pause() |
| 3669 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3670 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 3671 | | m.pause(self._mouse_pause_position) |
| 3672 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3673 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 3674 | | p = self.view.picked_object(x, y) |
| 3675 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3676 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3677 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 3678 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 3679 | | beyond, |
| 3680 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3681 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3682 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 3683 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3684 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3685 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3686 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 3687 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 3688 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3689 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3690 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 3691 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 3692 | | exclude=exclude) |
| 3693 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3694 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3695 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 3696 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 3697 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3698 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3699 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 3700 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 3701 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3702 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3703 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 3704 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3705 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3706 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3707 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 3708 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 3709 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3710 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3711 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 3712 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 3713 | | ^^^^^^^^^ |
| 3714 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3715 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3716 | | cget(self._c_pointers, n, pointer(values)) |
| 3717 | | ValueError: no active coordinate set |
| 3718 | | |
| 3719 | | ValueError: no active coordinate set |
| 3720 | | |
| 3721 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3722 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3723 | | cget(self._c_pointers, n, pointer(values)) |
| 3724 | | |
| 3725 | | See log for complete Python traceback. |
| 3726 | | |
| 3727 | | Traceback (most recent call last): |
| 3728 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3729 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3730 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3731 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3732 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3733 | | mouse_pause_tracking |
| 3734 | | self._mouse_pause() |
| 3735 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3736 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 3737 | | m.pause(self._mouse_pause_position) |
| 3738 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3739 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 3740 | | p = self.view.picked_object(x, y) |
| 3741 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3742 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3743 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 3744 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 3745 | | beyond, |
| 3746 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3747 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3748 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 3749 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3750 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3751 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3752 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 3753 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 3754 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3755 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3756 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 3757 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 3758 | | exclude=exclude) |
| 3759 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3760 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3761 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 3762 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 3763 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3764 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3765 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 3766 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 3767 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3768 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3769 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 3770 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3771 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3772 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3773 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 3774 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 3775 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3776 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3777 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 3778 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 3779 | | ^^^^^^^^^ |
| 3780 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3781 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3782 | | cget(self._c_pointers, n, pointer(values)) |
| 3783 | | ValueError: no active coordinate set |
| 3784 | | |
| 3785 | | ValueError: no active coordinate set |
| 3786 | | |
| 3787 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3788 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3789 | | cget(self._c_pointers, n, pointer(values)) |
| 3790 | | |
| 3791 | | See log for complete Python traceback. |
| 3792 | | |
| 3793 | | Traceback (most recent call last): |
| 3794 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3795 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3796 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3797 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3798 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3799 | | mouse_pause_tracking |
| 3800 | | self._mouse_pause() |
| 3801 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3802 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 3803 | | m.pause(self._mouse_pause_position) |
| 3804 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3805 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 3806 | | p = self.view.picked_object(x, y) |
| 3807 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3808 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3809 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 3810 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 3811 | | beyond, |
| 3812 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3813 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3814 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 3815 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3816 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3817 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3818 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 3819 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 3820 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3821 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3822 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 3823 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 3824 | | exclude=exclude) |
| 3825 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3826 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3827 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 3828 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 3829 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3830 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3831 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 3832 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 3833 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3834 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3835 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 3836 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3837 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3838 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3839 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 3840 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 3841 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3842 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3843 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 3844 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 3845 | | ^^^^^^^^^ |
| 3846 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3847 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3848 | | cget(self._c_pointers, n, pointer(values)) |
| 3849 | | ValueError: no active coordinate set |
| 3850 | | |
| 3851 | | ValueError: no active coordinate set |
| 3852 | | |
| 3853 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3854 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3855 | | cget(self._c_pointers, n, pointer(values)) |
| 3856 | | |
| 3857 | | See log for complete Python traceback. |
| 3858 | | |
| 3859 | | Traceback (most recent call last): |
| 3860 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3861 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3862 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3863 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3864 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3865 | | mouse_pause_tracking |
| 3866 | | self._mouse_pause() |
| 3867 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3868 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 3869 | | m.pause(self._mouse_pause_position) |
| 3870 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3871 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 3872 | | p = self.view.picked_object(x, y) |
| 3873 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3874 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3875 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 3876 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 3877 | | beyond, |
| 3878 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3879 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3880 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 3881 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3882 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3883 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3884 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 3885 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 3886 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3887 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3888 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 3889 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 3890 | | exclude=exclude) |
| 3891 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3892 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3893 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 3894 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 3895 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3896 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3897 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 3898 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 3899 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3900 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3901 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 3902 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3903 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3904 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3905 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 3906 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 3907 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3908 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3909 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 3910 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 3911 | | ^^^^^^^^^ |
| 3912 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3913 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3914 | | cget(self._c_pointers, n, pointer(values)) |
| 3915 | | ValueError: no active coordinate set |
| 3916 | | |
| 3917 | | ValueError: no active coordinate set |
| 3918 | | |
| 3919 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3920 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3921 | | cget(self._c_pointers, n, pointer(values)) |
| 3922 | | |
| 3923 | | See log for complete Python traceback. |
| 3924 | | |
| 3925 | | Traceback (most recent call last): |
| 3926 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3927 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3928 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3929 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3930 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3931 | | mouse_pause_tracking |
| 3932 | | self._mouse_pause() |
| 3933 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3934 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 3935 | | m.pause(self._mouse_pause_position) |
| 3936 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3937 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 3938 | | p = self.view.picked_object(x, y) |
| 3939 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3940 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3941 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 3942 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 3943 | | beyond, |
| 3944 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3945 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3946 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 3947 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3948 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3949 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3950 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 3951 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 3952 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3953 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3954 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 3955 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 3956 | | exclude=exclude) |
| 3957 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3958 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3959 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 3960 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 3961 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3962 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3963 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 3964 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 3965 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3966 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3967 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 3968 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 3969 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3970 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3971 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 3972 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 3973 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 3974 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3975 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 3976 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 3977 | | ^^^^^^^^^ |
| 3978 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3979 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3980 | | cget(self._c_pointers, n, pointer(values)) |
| 3981 | | ValueError: no active coordinate set |
| 3982 | | |
| 3983 | | ValueError: no active coordinate set |
| 3984 | | |
| 3985 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3986 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 3987 | | cget(self._c_pointers, n, pointer(values)) |
| 3988 | | |
| 3989 | | See log for complete Python traceback. |
| 3990 | | |
| 3991 | | Traceback (most recent call last): |
| 3992 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3993 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 3994 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 3995 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 3996 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 3997 | | mouse_pause_tracking |
| 3998 | | self._mouse_pause() |
| 3999 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4000 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4001 | | m.pause(self._mouse_pause_position) |
| 4002 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4003 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4004 | | p = self.view.picked_object(x, y) |
| 4005 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4006 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4007 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4008 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4009 | | beyond, |
| 4010 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4011 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4012 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 4013 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4014 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4015 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4016 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 4017 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 4018 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4019 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4020 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 4021 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 4022 | | exclude=exclude) |
| 4023 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4024 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4025 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 4026 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 4027 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4028 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4029 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 4030 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 4031 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4032 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4033 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 4034 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4035 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4036 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4037 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 4038 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 4039 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4040 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4041 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 4042 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 4043 | | ^^^^^^^^^ |
| 4044 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4045 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4046 | | cget(self._c_pointers, n, pointer(values)) |
| 4047 | | ValueError: no active coordinate set |
| 4048 | | |
| 4049 | | ValueError: no active coordinate set |
| 4050 | | |
| 4051 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4052 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4053 | | cget(self._c_pointers, n, pointer(values)) |
| 4054 | | |
| 4055 | | See log for complete Python traceback. |
| 4056 | | |
| 4057 | | Traceback (most recent call last): |
| 4058 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4059 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 4060 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 4061 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4062 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 4063 | | mouse_pause_tracking |
| 4064 | | self._mouse_pause() |
| 4065 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4066 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4067 | | m.pause(self._mouse_pause_position) |
| 4068 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4069 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4070 | | p = self.view.picked_object(x, y) |
| 4071 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4072 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4073 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4074 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4075 | | beyond, |
| 4076 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4077 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4078 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 4079 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4080 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4081 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4082 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 4083 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 4084 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4085 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4086 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 4087 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 4088 | | exclude=exclude) |
| 4089 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4090 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4091 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 4092 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 4093 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4094 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4095 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 4096 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 4097 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4098 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4099 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 4100 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4101 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4102 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4103 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 4104 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 4105 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4106 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4107 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 4108 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 4109 | | ^^^^^^^^^ |
| 4110 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4111 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4112 | | cget(self._c_pointers, n, pointer(values)) |
| 4113 | | ValueError: no active coordinate set |
| 4114 | | |
| 4115 | | ValueError: no active coordinate set |
| 4116 | | |
| 4117 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4118 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4119 | | cget(self._c_pointers, n, pointer(values)) |
| 4120 | | |
| 4121 | | See log for complete Python traceback. |
| 4122 | | |
| 4123 | | Traceback (most recent call last): |
| 4124 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4125 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 4126 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 4127 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4128 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 4129 | | mouse_pause_tracking |
| 4130 | | self._mouse_pause() |
| 4131 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4132 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4133 | | m.pause(self._mouse_pause_position) |
| 4134 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4135 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4136 | | p = self.view.picked_object(x, y) |
| 4137 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4138 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4139 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4140 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4141 | | beyond, |
| 4142 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4143 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4144 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 4145 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4146 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4147 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4148 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 4149 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 4150 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4151 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4152 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 4153 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 4154 | | exclude=exclude) |
| 4155 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4156 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4157 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 4158 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 4159 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4160 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4161 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 4162 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 4163 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4164 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4165 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 4166 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4167 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4168 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4169 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 4170 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 4171 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4172 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4173 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 4174 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 4175 | | ^^^^^^^^^ |
| 4176 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4177 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4178 | | cget(self._c_pointers, n, pointer(values)) |
| 4179 | | ValueError: no active coordinate set |
| 4180 | | |
| 4181 | | ValueError: no active coordinate set |
| 4182 | | |
| 4183 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4184 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4185 | | cget(self._c_pointers, n, pointer(values)) |
| 4186 | | |
| 4187 | | See log for complete Python traceback. |
| 4188 | | |
| 4189 | | Traceback (most recent call last): |
| 4190 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4191 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 4192 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 4193 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4194 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 4195 | | mouse_pause_tracking |
| 4196 | | self._mouse_pause() |
| 4197 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4198 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4199 | | m.pause(self._mouse_pause_position) |
| 4200 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4201 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4202 | | p = self.view.picked_object(x, y) |
| 4203 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4204 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4205 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4206 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4207 | | beyond, |
| 4208 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4209 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4210 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 4211 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4212 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4213 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4214 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 4215 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 4216 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4217 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4218 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 4219 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 4220 | | exclude=exclude) |
| 4221 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4222 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4223 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 4224 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 4225 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4226 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4227 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 4228 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 4229 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4230 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4231 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 4232 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4233 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4234 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4235 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 4236 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 4237 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4238 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4239 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 4240 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 4241 | | ^^^^^^^^^ |
| 4242 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4243 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4244 | | cget(self._c_pointers, n, pointer(values)) |
| 4245 | | ValueError: no active coordinate set |
| 4246 | | |
| 4247 | | ValueError: no active coordinate set |
| 4248 | | |
| 4249 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4250 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4251 | | cget(self._c_pointers, n, pointer(values)) |
| 4252 | | |
| 4253 | | See log for complete Python traceback. |
| 4254 | | |
| 4255 | | Traceback (most recent call last): |
| 4256 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4257 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 4258 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 4259 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4260 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 4261 | | mouse_pause_tracking |
| 4262 | | self._mouse_pause() |
| 4263 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4264 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4265 | | m.pause(self._mouse_pause_position) |
| 4266 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4267 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4268 | | p = self.view.picked_object(x, y) |
| 4269 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4270 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4271 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4272 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4273 | | beyond, |
| 4274 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4275 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4276 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 4277 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4278 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4279 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4280 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 4281 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 4282 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4283 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4284 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 4285 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 4286 | | exclude=exclude) |
| 4287 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4288 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4289 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 4290 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 4291 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4292 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4293 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 4294 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 4295 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4296 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4297 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 4298 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4299 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4300 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4301 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 4302 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 4303 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4304 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4305 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 4306 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 4307 | | ^^^^^^^^^ |
| 4308 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4309 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4310 | | cget(self._c_pointers, n, pointer(values)) |
| 4311 | | ValueError: no active coordinate set |
| 4312 | | |
| 4313 | | ValueError: no active coordinate set |
| 4314 | | |
| 4315 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4316 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4317 | | cget(self._c_pointers, n, pointer(values)) |
| 4318 | | |
| 4319 | | See log for complete Python traceback. |
| 4320 | | |
| 4321 | | Traceback (most recent call last): |
| 4322 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4323 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 4324 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 4325 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4326 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 4327 | | mouse_pause_tracking |
| 4328 | | self._mouse_pause() |
| 4329 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4330 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4331 | | m.pause(self._mouse_pause_position) |
| 4332 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4333 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4334 | | p = self.view.picked_object(x, y) |
| 4335 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4336 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4337 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4338 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4339 | | beyond, |
| 4340 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4341 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4342 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 4343 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4344 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4345 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4346 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 4347 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 4348 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4349 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4350 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 4351 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 4352 | | exclude=exclude) |
| 4353 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4354 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4355 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 4356 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 4357 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4358 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4359 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 4360 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 4361 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4362 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4363 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 4364 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4365 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4366 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4367 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 4368 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 4369 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4370 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4371 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 4372 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 4373 | | ^^^^^^^^^ |
| 4374 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4375 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4376 | | cget(self._c_pointers, n, pointer(values)) |
| 4377 | | ValueError: no active coordinate set |
| 4378 | | |
| 4379 | | ValueError: no active coordinate set |
| 4380 | | |
| 4381 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4382 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4383 | | cget(self._c_pointers, n, pointer(values)) |
| 4384 | | |
| 4385 | | See log for complete Python traceback. |
| 4386 | | |
| 4387 | | Traceback (most recent call last): |
| 4388 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4389 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 4390 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 4391 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4392 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 4393 | | mouse_pause_tracking |
| 4394 | | self._mouse_pause() |
| 4395 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4396 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4397 | | m.pause(self._mouse_pause_position) |
| 4398 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4399 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4400 | | p = self.view.picked_object(x, y) |
| 4401 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4402 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4403 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4404 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4405 | | beyond, |
| 4406 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4407 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4408 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 4409 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4410 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4411 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4412 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 4413 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 4414 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4415 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4416 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 4417 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 4418 | | exclude=exclude) |
| 4419 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4420 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4421 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 4422 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 4423 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4424 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4425 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 4426 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 4427 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4428 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4429 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 4430 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4431 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4432 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4433 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 4434 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 4435 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4436 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4437 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 4438 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 4439 | | ^^^^^^^^^ |
| 4440 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4441 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4442 | | cget(self._c_pointers, n, pointer(values)) |
| 4443 | | ValueError: no active coordinate set |
| 4444 | | |
| 4445 | | ValueError: no active coordinate set |
| 4446 | | |
| 4447 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4448 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4449 | | cget(self._c_pointers, n, pointer(values)) |
| 4450 | | |
| 4451 | | See log for complete Python traceback. |
| 4452 | | |
| 4453 | | Traceback (most recent call last): |
| 4454 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4455 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 4456 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 4457 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4458 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 4459 | | mouse_pause_tracking |
| 4460 | | self._mouse_pause() |
| 4461 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4462 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4463 | | m.pause(self._mouse_pause_position) |
| 4464 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4465 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4466 | | p = self.view.picked_object(x, y) |
| 4467 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4468 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4469 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4470 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4471 | | beyond, |
| 4472 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4473 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4474 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 4475 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4476 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4477 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4478 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 4479 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 4480 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4481 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4482 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 4483 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 4484 | | exclude=exclude) |
| 4485 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4486 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4487 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 4488 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 4489 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4490 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4491 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 4492 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 4493 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4494 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4495 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 4496 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4497 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4498 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4499 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 4500 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 4501 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4502 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4503 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 4504 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 4505 | | ^^^^^^^^^ |
| 4506 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4507 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4508 | | cget(self._c_pointers, n, pointer(values)) |
| 4509 | | ValueError: no active coordinate set |
| 4510 | | |
| 4511 | | ValueError: no active coordinate set |
| 4512 | | |
| 4513 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4514 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4515 | | cget(self._c_pointers, n, pointer(values)) |
| 4516 | | |
| 4517 | | See log for complete Python traceback. |
| 4518 | | |
| 4519 | | Traceback (most recent call last): |
| 4520 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4521 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 4522 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 4523 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4524 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 4525 | | mouse_pause_tracking |
| 4526 | | self._mouse_pause() |
| 4527 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4528 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4529 | | m.pause(self._mouse_pause_position) |
| 4530 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4531 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4532 | | p = self.view.picked_object(x, y) |
| 4533 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4534 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4535 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4536 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4537 | | beyond, |
| 4538 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4539 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4540 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 4541 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4542 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4543 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4544 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 4545 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 4546 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4547 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4548 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 4549 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 4550 | | exclude=exclude) |
| 4551 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4552 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4553 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 4554 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 4555 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4556 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4557 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 4558 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 4559 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4560 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4561 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 4562 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4563 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4564 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4565 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 4566 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 4567 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4568 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4569 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 4570 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 4571 | | ^^^^^^^^^ |
| 4572 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4573 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4574 | | cget(self._c_pointers, n, pointer(values)) |
| 4575 | | ValueError: no active coordinate set |
| 4576 | | |
| 4577 | | ValueError: no active coordinate set |
| 4578 | | |
| 4579 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4580 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4581 | | cget(self._c_pointers, n, pointer(values)) |
| 4582 | | |
| 4583 | | See log for complete Python traceback. |
| 4584 | | |
| 4585 | | Traceback (most recent call last): |
| 4586 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4587 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 4588 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 4589 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4590 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 4591 | | mouse_pause_tracking |
| 4592 | | self._mouse_pause() |
| 4593 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4594 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4595 | | m.pause(self._mouse_pause_position) |
| 4596 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4597 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4598 | | p = self.view.picked_object(x, y) |
| 4599 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4600 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4601 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4602 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4603 | | beyond, |
| 4604 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4605 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4606 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 4607 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4608 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4609 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4610 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 4611 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 4612 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4613 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4614 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 4615 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 4616 | | exclude=exclude) |
| 4617 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4618 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4619 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 4620 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 4621 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4622 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4623 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 4624 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 4625 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4626 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4627 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 4628 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4629 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4630 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4631 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 4632 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 4633 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4634 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4635 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 4636 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 4637 | | ^^^^^^^^^ |
| 4638 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4639 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4640 | | cget(self._c_pointers, n, pointer(values)) |
| 4641 | | ValueError: no active coordinate set |
| 4642 | | |
| 4643 | | ValueError: no active coordinate set |
| 4644 | | |
| 4645 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4646 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4647 | | cget(self._c_pointers, n, pointer(values)) |
| 4648 | | |
| 4649 | | See log for complete Python traceback. |
| 4650 | | |
| 4651 | | Traceback (most recent call last): |
| 4652 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4653 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 4654 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 4655 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4656 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 4657 | | mouse_pause_tracking |
| 4658 | | self._mouse_pause() |
| 4659 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4660 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4661 | | m.pause(self._mouse_pause_position) |
| 4662 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4663 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4664 | | p = self.view.picked_object(x, y) |
| 4665 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4666 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4667 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4668 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4669 | | beyond, |
| 4670 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4671 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4672 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 4673 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4674 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4675 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4676 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 4677 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 4678 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4679 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4680 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 4681 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 4682 | | exclude=exclude) |
| 4683 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4684 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4685 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 4686 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 4687 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4688 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4689 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 4690 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 4691 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4692 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4693 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 4694 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4695 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4696 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4697 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 4698 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 4699 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4700 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4701 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 4702 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 4703 | | ^^^^^^^^^ |
| 4704 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4705 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4706 | | cget(self._c_pointers, n, pointer(values)) |
| 4707 | | ValueError: no active coordinate set |
| 4708 | | |
| 4709 | | ValueError: no active coordinate set |
| 4710 | | |
| 4711 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4712 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4713 | | cget(self._c_pointers, n, pointer(values)) |
| 4714 | | |
| 4715 | | See log for complete Python traceback. |
| 4716 | | |
| 4717 | | Traceback (most recent call last): |
| 4718 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4719 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 4720 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 4721 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4722 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 4723 | | mouse_pause_tracking |
| 4724 | | self._mouse_pause() |
| 4725 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4726 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4727 | | m.pause(self._mouse_pause_position) |
| 4728 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4729 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4730 | | p = self.view.picked_object(x, y) |
| 4731 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4732 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4733 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4734 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4735 | | beyond, |
| 4736 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4737 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4738 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 4739 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4740 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4741 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4742 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 4743 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 4744 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4745 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4746 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 4747 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 4748 | | exclude=exclude) |
| 4749 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4750 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4751 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 4752 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 4753 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4754 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4755 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 4756 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 4757 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4758 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4759 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 4760 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4761 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4762 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4763 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 4764 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 4765 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4766 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4767 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 4768 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 4769 | | ^^^^^^^^^ |
| 4770 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4771 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4772 | | cget(self._c_pointers, n, pointer(values)) |
| 4773 | | ValueError: no active coordinate set |
| 4774 | | |
| 4775 | | ValueError: no active coordinate set |
| 4776 | | |
| 4777 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4778 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4779 | | cget(self._c_pointers, n, pointer(values)) |
| 4780 | | |
| 4781 | | See log for complete Python traceback. |
| 4782 | | |
| 4783 | | Traceback (most recent call last): |
| 4784 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4785 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 4786 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 4787 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4788 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 4789 | | mouse_pause_tracking |
| 4790 | | self._mouse_pause() |
| 4791 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4792 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4793 | | m.pause(self._mouse_pause_position) |
| 4794 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4795 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4796 | | p = self.view.picked_object(x, y) |
| 4797 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4798 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4799 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4800 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4801 | | beyond, |
| 4802 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4803 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4804 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 4805 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4806 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4807 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4808 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 4809 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 4810 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4811 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4812 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 4813 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 4814 | | exclude=exclude) |
| 4815 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4816 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4817 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 4818 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 4819 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4820 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4821 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 4822 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 4823 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4824 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4825 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 4826 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4827 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4828 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4829 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 4830 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 4831 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4832 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4833 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 4834 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 4835 | | ^^^^^^^^^ |
| 4836 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4837 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4838 | | cget(self._c_pointers, n, pointer(values)) |
| 4839 | | ValueError: no active coordinate set |
| 4840 | | |
| 4841 | | ValueError: no active coordinate set |
| 4842 | | |
| 4843 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4844 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4845 | | cget(self._c_pointers, n, pointer(values)) |
| 4846 | | |
| 4847 | | See log for complete Python traceback. |
| 4848 | | |
| 4849 | | Traceback (most recent call last): |
| 4850 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4851 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 4852 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 4853 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4854 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 4855 | | mouse_pause_tracking |
| 4856 | | self._mouse_pause() |
| 4857 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4858 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4859 | | m.pause(self._mouse_pause_position) |
| 4860 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4861 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4862 | | p = self.view.picked_object(x, y) |
| 4863 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4864 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4865 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4866 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4867 | | beyond, |
| 4868 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4869 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4870 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 4871 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4872 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4873 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4874 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 4875 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 4876 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4877 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4878 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 4879 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 4880 | | exclude=exclude) |
| 4881 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4882 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4883 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 4884 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 4885 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4886 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4887 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 4888 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 4889 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4890 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4891 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 4892 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4893 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4894 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4895 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 4896 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 4897 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4898 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4899 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 4900 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 4901 | | ^^^^^^^^^ |
| 4902 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4903 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4904 | | cget(self._c_pointers, n, pointer(values)) |
| 4905 | | ValueError: no active coordinate set |
| 4906 | | |
| 4907 | | ValueError: no active coordinate set |
| 4908 | | |
| 4909 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4910 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4911 | | cget(self._c_pointers, n, pointer(values)) |
| 4912 | | |
| 4913 | | See log for complete Python traceback. |
| 4914 | | |
| 4915 | | Traceback (most recent call last): |
| 4916 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4917 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 4918 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 4919 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4920 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 4921 | | mouse_pause_tracking |
| 4922 | | self._mouse_pause() |
| 4923 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4924 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4925 | | m.pause(self._mouse_pause_position) |
| 4926 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4927 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4928 | | p = self.view.picked_object(x, y) |
| 4929 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4930 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4931 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4932 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4933 | | beyond, |
| 4934 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4935 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4936 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 4937 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4938 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4939 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4940 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 4941 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 4942 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4943 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4944 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 4945 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 4946 | | exclude=exclude) |
| 4947 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4948 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4949 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 4950 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 4951 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4952 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4953 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 4954 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 4955 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4956 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4957 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 4958 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 4959 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4960 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4961 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 4962 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 4963 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4964 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4965 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 4966 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 4967 | | ^^^^^^^^^ |
| 4968 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4969 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4970 | | cget(self._c_pointers, n, pointer(values)) |
| 4971 | | ValueError: no active coordinate set |
| 4972 | | |
| 4973 | | ValueError: no active coordinate set |
| 4974 | | |
| 4975 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4976 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 4977 | | cget(self._c_pointers, n, pointer(values)) |
| 4978 | | |
| 4979 | | See log for complete Python traceback. |
| 4980 | | |
| 4981 | | Traceback (most recent call last): |
| 4982 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4983 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 4984 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 4985 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4986 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 4987 | | mouse_pause_tracking |
| 4988 | | self._mouse_pause() |
| 4989 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4990 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 4991 | | m.pause(self._mouse_pause_position) |
| 4992 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4993 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 4994 | | p = self.view.picked_object(x, y) |
| 4995 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 4996 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 4997 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 4998 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 4999 | | beyond, |
| 5000 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5001 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5002 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5003 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5004 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5005 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5006 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5007 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5008 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5009 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5010 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 5011 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 5012 | | exclude=exclude) |
| 5013 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5014 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5015 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 5016 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 5017 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5018 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5019 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 5020 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 5021 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5022 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5023 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 5024 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5025 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5026 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5027 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 5028 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 5029 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5030 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5031 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 5032 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 5033 | | ^^^^^^^^^ |
| 5034 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5035 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5036 | | cget(self._c_pointers, n, pointer(values)) |
| 5037 | | ValueError: no active coordinate set |
| 5038 | | |
| 5039 | | ValueError: no active coordinate set |
| 5040 | | |
| 5041 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5042 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5043 | | cget(self._c_pointers, n, pointer(values)) |
| 5044 | | |
| 5045 | | See log for complete Python traceback. |
| 5046 | | |
| 5047 | | Traceback (most recent call last): |
| 5048 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5049 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 5050 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 5051 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5052 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 5053 | | mouse_pause_tracking |
| 5054 | | self._mouse_pause() |
| 5055 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5056 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 5057 | | m.pause(self._mouse_pause_position) |
| 5058 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5059 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 5060 | | p = self.view.picked_object(x, y) |
| 5061 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5062 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5063 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 5064 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 5065 | | beyond, |
| 5066 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5067 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5068 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5069 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5070 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5071 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5072 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5073 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5074 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5075 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5076 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 5077 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 5078 | | exclude=exclude) |
| 5079 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5080 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5081 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 5082 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 5083 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5084 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5085 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 5086 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 5087 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5088 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5089 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 5090 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5091 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5092 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5093 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 5094 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 5095 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5096 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5097 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 5098 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 5099 | | ^^^^^^^^^ |
| 5100 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5101 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5102 | | cget(self._c_pointers, n, pointer(values)) |
| 5103 | | ValueError: no active coordinate set |
| 5104 | | |
| 5105 | | ValueError: no active coordinate set |
| 5106 | | |
| 5107 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5108 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5109 | | cget(self._c_pointers, n, pointer(values)) |
| 5110 | | |
| 5111 | | See log for complete Python traceback. |
| 5112 | | |
| 5113 | | Traceback (most recent call last): |
| 5114 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5115 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 5116 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 5117 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5118 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 5119 | | mouse_pause_tracking |
| 5120 | | self._mouse_pause() |
| 5121 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5122 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 5123 | | m.pause(self._mouse_pause_position) |
| 5124 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5125 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 5126 | | p = self.view.picked_object(x, y) |
| 5127 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5128 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5129 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 5130 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 5131 | | beyond, |
| 5132 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5133 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5134 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5135 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5136 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5137 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5138 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5139 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5140 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5141 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5142 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 5143 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 5144 | | exclude=exclude) |
| 5145 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5146 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5147 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 5148 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 5149 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5150 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5151 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 5152 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 5153 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5154 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5155 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 5156 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5157 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5158 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5159 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 5160 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 5161 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5162 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5163 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 5164 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 5165 | | ^^^^^^^^^ |
| 5166 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5167 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5168 | | cget(self._c_pointers, n, pointer(values)) |
| 5169 | | ValueError: no active coordinate set |
| 5170 | | |
| 5171 | | ValueError: no active coordinate set |
| 5172 | | |
| 5173 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5174 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5175 | | cget(self._c_pointers, n, pointer(values)) |
| 5176 | | |
| 5177 | | See log for complete Python traceback. |
| 5178 | | |
| 5179 | | Traceback (most recent call last): |
| 5180 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5181 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 5182 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 5183 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5184 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 5185 | | mouse_pause_tracking |
| 5186 | | self._mouse_pause() |
| 5187 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5188 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 5189 | | m.pause(self._mouse_pause_position) |
| 5190 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5191 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 5192 | | p = self.view.picked_object(x, y) |
| 5193 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5194 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5195 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 5196 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 5197 | | beyond, |
| 5198 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5199 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5200 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5201 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5202 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5203 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5204 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5205 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5206 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5207 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5208 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 5209 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 5210 | | exclude=exclude) |
| 5211 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5212 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5213 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 5214 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 5215 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5216 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5217 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 5218 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 5219 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5220 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5221 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 5222 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5223 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5224 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5225 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 5226 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 5227 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5228 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5229 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 5230 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 5231 | | ^^^^^^^^^ |
| 5232 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5233 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5234 | | cget(self._c_pointers, n, pointer(values)) |
| 5235 | | ValueError: no active coordinate set |
| 5236 | | |
| 5237 | | ValueError: no active coordinate set |
| 5238 | | |
| 5239 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5240 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5241 | | cget(self._c_pointers, n, pointer(values)) |
| 5242 | | |
| 5243 | | See log for complete Python traceback. |
| 5244 | | |
| 5245 | | Traceback (most recent call last): |
| 5246 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5247 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 5248 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 5249 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5250 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 5251 | | mouse_pause_tracking |
| 5252 | | self._mouse_pause() |
| 5253 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5254 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 5255 | | m.pause(self._mouse_pause_position) |
| 5256 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5257 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 5258 | | p = self.view.picked_object(x, y) |
| 5259 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5260 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5261 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 5262 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 5263 | | beyond, |
| 5264 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5265 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5266 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5267 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5268 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5269 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5270 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5271 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5272 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5273 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5274 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 5275 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 5276 | | exclude=exclude) |
| 5277 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5278 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5279 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 5280 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 5281 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5282 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5283 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 5284 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 5285 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5286 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5287 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 5288 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5289 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5290 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5291 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 5292 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 5293 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5294 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5295 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 5296 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 5297 | | ^^^^^^^^^ |
| 5298 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5299 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5300 | | cget(self._c_pointers, n, pointer(values)) |
| 5301 | | ValueError: no active coordinate set |
| 5302 | | |
| 5303 | | ValueError: no active coordinate set |
| 5304 | | |
| 5305 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5306 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5307 | | cget(self._c_pointers, n, pointer(values)) |
| 5308 | | |
| 5309 | | See log for complete Python traceback. |
| 5310 | | |
| 5311 | | Traceback (most recent call last): |
| 5312 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5313 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 5314 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 5315 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5316 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 5317 | | mouse_pause_tracking |
| 5318 | | self._mouse_pause() |
| 5319 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5320 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 5321 | | m.pause(self._mouse_pause_position) |
| 5322 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5323 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 5324 | | p = self.view.picked_object(x, y) |
| 5325 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5326 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5327 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 5328 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 5329 | | beyond, |
| 5330 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5331 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5332 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5333 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5334 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5335 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5336 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5337 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5338 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5339 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5340 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 5341 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 5342 | | exclude=exclude) |
| 5343 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5344 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5345 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 5346 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 5347 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5348 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5349 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 5350 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 5351 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5352 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5353 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 5354 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5355 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5356 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5357 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 5358 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 5359 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5360 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5361 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 5362 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 5363 | | ^^^^^^^^^ |
| 5364 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5365 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5366 | | cget(self._c_pointers, n, pointer(values)) |
| 5367 | | ValueError: no active coordinate set |
| 5368 | | |
| 5369 | | ValueError: no active coordinate set |
| 5370 | | |
| 5371 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5372 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5373 | | cget(self._c_pointers, n, pointer(values)) |
| 5374 | | |
| 5375 | | See log for complete Python traceback. |
| 5376 | | |
| 5377 | | Traceback (most recent call last): |
| 5378 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5379 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 5380 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 5381 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5382 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 5383 | | mouse_pause_tracking |
| 5384 | | self._mouse_pause() |
| 5385 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5386 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 5387 | | m.pause(self._mouse_pause_position) |
| 5388 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5389 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 5390 | | p = self.view.picked_object(x, y) |
| 5391 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5392 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5393 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 5394 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 5395 | | beyond, |
| 5396 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5397 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5398 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5399 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5400 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5401 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5402 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5403 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5404 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5405 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5406 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 5407 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 5408 | | exclude=exclude) |
| 5409 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5410 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5411 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 5412 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 5413 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5414 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5415 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 5416 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 5417 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5418 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5419 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 5420 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5421 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5422 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5423 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 5424 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 5425 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5426 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5427 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 5428 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 5429 | | ^^^^^^^^^ |
| 5430 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5431 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5432 | | cget(self._c_pointers, n, pointer(values)) |
| 5433 | | ValueError: no active coordinate set |
| 5434 | | |
| 5435 | | ValueError: no active coordinate set |
| 5436 | | |
| 5437 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5438 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5439 | | cget(self._c_pointers, n, pointer(values)) |
| 5440 | | |
| 5441 | | See log for complete Python traceback. |
| 5442 | | |
| 5443 | | Traceback (most recent call last): |
| 5444 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5445 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 5446 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 5447 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5448 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 5449 | | mouse_pause_tracking |
| 5450 | | self._mouse_pause() |
| 5451 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5452 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 5453 | | m.pause(self._mouse_pause_position) |
| 5454 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5455 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 5456 | | p = self.view.picked_object(x, y) |
| 5457 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5458 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5459 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 5460 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 5461 | | beyond, |
| 5462 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5463 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5464 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5465 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5466 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5467 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5468 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5469 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5470 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5471 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5472 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 5473 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 5474 | | exclude=exclude) |
| 5475 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5476 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5477 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 5478 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 5479 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5480 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5481 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 5482 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 5483 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5484 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5485 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 5486 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5487 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5488 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5489 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 5490 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 5491 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5492 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5493 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 5494 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 5495 | | ^^^^^^^^^ |
| 5496 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5497 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5498 | | cget(self._c_pointers, n, pointer(values)) |
| 5499 | | ValueError: no active coordinate set |
| 5500 | | |
| 5501 | | ValueError: no active coordinate set |
| 5502 | | |
| 5503 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5504 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5505 | | cget(self._c_pointers, n, pointer(values)) |
| 5506 | | |
| 5507 | | See log for complete Python traceback. |
| 5508 | | |
| 5509 | | Traceback (most recent call last): |
| 5510 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5511 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 5512 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 5513 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5514 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 5515 | | mouse_pause_tracking |
| 5516 | | self._mouse_pause() |
| 5517 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5518 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 5519 | | m.pause(self._mouse_pause_position) |
| 5520 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5521 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 5522 | | p = self.view.picked_object(x, y) |
| 5523 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5524 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5525 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 5526 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 5527 | | beyond, |
| 5528 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5529 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5530 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5531 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5532 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5533 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5534 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5535 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5536 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5537 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5538 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 5539 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 5540 | | exclude=exclude) |
| 5541 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5542 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5543 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 5544 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 5545 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5546 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5547 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 5548 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 5549 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5550 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5551 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 5552 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5553 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5554 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5555 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 5556 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 5557 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5558 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5559 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 5560 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 5561 | | ^^^^^^^^^ |
| 5562 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5563 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5564 | | cget(self._c_pointers, n, pointer(values)) |
| 5565 | | ValueError: no active coordinate set |
| 5566 | | |
| 5567 | | ValueError: no active coordinate set |
| 5568 | | |
| 5569 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5570 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5571 | | cget(self._c_pointers, n, pointer(values)) |
| 5572 | | |
| 5573 | | See log for complete Python traceback. |
| 5574 | | |
| 5575 | | Traceback (most recent call last): |
| 5576 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5577 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 5578 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 5579 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5580 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 5581 | | mouse_pause_tracking |
| 5582 | | self._mouse_pause() |
| 5583 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5584 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 5585 | | m.pause(self._mouse_pause_position) |
| 5586 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5587 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 5588 | | p = self.view.picked_object(x, y) |
| 5589 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5590 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5591 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 5592 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 5593 | | beyond, |
| 5594 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5595 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5596 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5597 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5598 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5599 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5600 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5601 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5602 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5603 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5604 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 5605 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 5606 | | exclude=exclude) |
| 5607 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5608 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5609 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 5610 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 5611 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5612 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5613 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 5614 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 5615 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5616 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5617 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 5618 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5619 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5620 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5621 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 5622 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 5623 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5624 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5625 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 5626 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 5627 | | ^^^^^^^^^ |
| 5628 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5629 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5630 | | cget(self._c_pointers, n, pointer(values)) |
| 5631 | | ValueError: no active coordinate set |
| 5632 | | |
| 5633 | | ValueError: no active coordinate set |
| 5634 | | |
| 5635 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5636 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5637 | | cget(self._c_pointers, n, pointer(values)) |
| 5638 | | |
| 5639 | | See log for complete Python traceback. |
| 5640 | | |
| 5641 | | Traceback (most recent call last): |
| 5642 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5643 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 5644 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 5645 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5646 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 5647 | | mouse_pause_tracking |
| 5648 | | self._mouse_pause() |
| 5649 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5650 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 5651 | | m.pause(self._mouse_pause_position) |
| 5652 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5653 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 5654 | | p = self.view.picked_object(x, y) |
| 5655 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5656 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5657 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 5658 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 5659 | | beyond, |
| 5660 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5661 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5662 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5663 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5664 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5665 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5666 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5667 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5668 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5669 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5670 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 5671 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 5672 | | exclude=exclude) |
| 5673 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5674 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5675 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 5676 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 5677 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5678 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5679 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 5680 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 5681 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5682 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5683 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 5684 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5685 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5686 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5687 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 5688 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 5689 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5690 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5691 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 5692 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 5693 | | ^^^^^^^^^ |
| 5694 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5695 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5696 | | cget(self._c_pointers, n, pointer(values)) |
| 5697 | | ValueError: no active coordinate set |
| 5698 | | |
| 5699 | | ValueError: no active coordinate set |
| 5700 | | |
| 5701 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5702 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5703 | | cget(self._c_pointers, n, pointer(values)) |
| 5704 | | |
| 5705 | | See log for complete Python traceback. |
| 5706 | | |
| 5707 | | Traceback (most recent call last): |
| 5708 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5709 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 5710 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 5711 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5712 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 5713 | | mouse_pause_tracking |
| 5714 | | self._mouse_pause() |
| 5715 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5716 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 5717 | | m.pause(self._mouse_pause_position) |
| 5718 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5719 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 5720 | | p = self.view.picked_object(x, y) |
| 5721 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5722 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5723 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 5724 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 5725 | | beyond, |
| 5726 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5727 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5728 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5729 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5730 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5731 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5732 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5733 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5734 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5735 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5736 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 5737 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 5738 | | exclude=exclude) |
| 5739 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5740 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5741 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 5742 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 5743 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5744 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5745 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 5746 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 5747 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5748 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5749 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 5750 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5751 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5752 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5753 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 5754 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 5755 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5756 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5757 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 5758 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 5759 | | ^^^^^^^^^ |
| 5760 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5761 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5762 | | cget(self._c_pointers, n, pointer(values)) |
| 5763 | | ValueError: no active coordinate set |
| 5764 | | |
| 5765 | | ValueError: no active coordinate set |
| 5766 | | |
| 5767 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5768 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5769 | | cget(self._c_pointers, n, pointer(values)) |
| 5770 | | |
| 5771 | | See log for complete Python traceback. |
| 5772 | | |
| 5773 | | Traceback (most recent call last): |
| 5774 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5775 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 5776 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 5777 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5778 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 5779 | | mouse_pause_tracking |
| 5780 | | self._mouse_pause() |
| 5781 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5782 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 5783 | | m.pause(self._mouse_pause_position) |
| 5784 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5785 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 5786 | | p = self.view.picked_object(x, y) |
| 5787 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5788 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5789 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 5790 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 5791 | | beyond, |
| 5792 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5793 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5794 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5795 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5796 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5797 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5798 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5799 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5800 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5801 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5802 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 5803 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 5804 | | exclude=exclude) |
| 5805 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5806 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5807 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 5808 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 5809 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5810 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5811 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 5812 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 5813 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5814 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5815 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 5816 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5817 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5818 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5819 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 5820 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 5821 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5822 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5823 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 5824 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 5825 | | ^^^^^^^^^ |
| 5826 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5827 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5828 | | cget(self._c_pointers, n, pointer(values)) |
| 5829 | | ValueError: no active coordinate set |
| 5830 | | |
| 5831 | | ValueError: no active coordinate set |
| 5832 | | |
| 5833 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5834 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5835 | | cget(self._c_pointers, n, pointer(values)) |
| 5836 | | |
| 5837 | | See log for complete Python traceback. |
| 5838 | | |
| 5839 | | Traceback (most recent call last): |
| 5840 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5841 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 5842 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 5843 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5844 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 5845 | | mouse_pause_tracking |
| 5846 | | self._mouse_pause() |
| 5847 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5848 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 5849 | | m.pause(self._mouse_pause_position) |
| 5850 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5851 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 5852 | | p = self.view.picked_object(x, y) |
| 5853 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5854 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5855 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 5856 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 5857 | | beyond, |
| 5858 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5859 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5860 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5861 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5862 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5863 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5864 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5865 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5866 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5867 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5868 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 5869 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 5870 | | exclude=exclude) |
| 5871 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5872 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5873 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 5874 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 5875 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5876 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5877 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 5878 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 5879 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5880 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5881 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 5882 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5883 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5884 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5885 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 5886 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 5887 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5888 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5889 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 5890 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 5891 | | ^^^^^^^^^ |
| 5892 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5893 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5894 | | cget(self._c_pointers, n, pointer(values)) |
| 5895 | | ValueError: no active coordinate set |
| 5896 | | |
| 5897 | | ValueError: no active coordinate set |
| 5898 | | |
| 5899 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5900 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5901 | | cget(self._c_pointers, n, pointer(values)) |
| 5902 | | |
| 5903 | | See log for complete Python traceback. |
| 5904 | | |
| 5905 | | Traceback (most recent call last): |
| 5906 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5907 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 5908 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 5909 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5910 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 5911 | | mouse_pause_tracking |
| 5912 | | self._mouse_pause() |
| 5913 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5914 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 5915 | | m.pause(self._mouse_pause_position) |
| 5916 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5917 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 5918 | | p = self.view.picked_object(x, y) |
| 5919 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5920 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5921 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 5922 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 5923 | | beyond, |
| 5924 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5925 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5926 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5927 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5928 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5929 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5930 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5931 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5932 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5933 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5934 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 5935 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 5936 | | exclude=exclude) |
| 5937 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5938 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5939 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 5940 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 5941 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5942 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5943 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 5944 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 5945 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5946 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5947 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 5948 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5949 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5950 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5951 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 5952 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 5953 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5954 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5955 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 5956 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 5957 | | ^^^^^^^^^ |
| 5958 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5959 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5960 | | cget(self._c_pointers, n, pointer(values)) |
| 5961 | | ValueError: no active coordinate set |
| 5962 | | |
| 5963 | | ValueError: no active coordinate set |
| 5964 | | |
| 5965 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5966 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 5967 | | cget(self._c_pointers, n, pointer(values)) |
| 5968 | | |
| 5969 | | See log for complete Python traceback. |
| 5970 | | |
| 5971 | | Traceback (most recent call last): |
| 5972 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5973 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 5974 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 5975 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5976 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 5977 | | mouse_pause_tracking |
| 5978 | | self._mouse_pause() |
| 5979 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5980 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 5981 | | m.pause(self._mouse_pause_position) |
| 5982 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5983 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 5984 | | p = self.view.picked_object(x, y) |
| 5985 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5986 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5987 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 5988 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 5989 | | beyond, |
| 5990 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5991 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5992 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 5993 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 5994 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5995 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 5996 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 5997 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 5998 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 5999 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6000 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 6001 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 6002 | | exclude=exclude) |
| 6003 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6004 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6005 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 6006 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 6007 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6008 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6009 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 6010 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 6011 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6012 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6013 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 6014 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 6015 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6016 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6017 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 6018 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 6019 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6020 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6021 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 6022 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 6023 | | ^^^^^^^^^ |
| 6024 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6025 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 6026 | | cget(self._c_pointers, n, pointer(values)) |
| 6027 | | ValueError: no active coordinate set |
| 6028 | | |
| 6029 | | ValueError: no active coordinate set |
| 6030 | | |
| 6031 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6032 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 6033 | | cget(self._c_pointers, n, pointer(values)) |
| 6034 | | |
| 6035 | | See log for complete Python traceback. |
| 6036 | | |
| 6037 | | Traceback (most recent call last): |
| 6038 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6039 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 6040 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 6041 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6042 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 6043 | | mouse_pause_tracking |
| 6044 | | self._mouse_pause() |
| 6045 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6046 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 6047 | | m.pause(self._mouse_pause_position) |
| 6048 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6049 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 6050 | | p = self.view.picked_object(x, y) |
| 6051 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6052 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6053 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 6054 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 6055 | | beyond, |
| 6056 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6057 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6058 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 6059 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 6060 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6061 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6062 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 6063 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 6064 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6065 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6066 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 6067 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 6068 | | exclude=exclude) |
| 6069 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6070 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6071 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 6072 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 6073 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6074 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6075 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 6076 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 6077 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6078 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6079 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 6080 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 6081 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6082 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6083 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 6084 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 6085 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6086 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6087 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 6088 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 6089 | | ^^^^^^^^^ |
| 6090 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6091 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 6092 | | cget(self._c_pointers, n, pointer(values)) |
| 6093 | | ValueError: no active coordinate set |
| 6094 | | |
| 6095 | | ValueError: no active coordinate set |
| 6096 | | |
| 6097 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6098 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 6099 | | cget(self._c_pointers, n, pointer(values)) |
| 6100 | | |
| 6101 | | See log for complete Python traceback. |
| 6102 | | |
| 6103 | | Traceback (most recent call last): |
| 6104 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6105 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 6106 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 6107 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6108 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 6109 | | mouse_pause_tracking |
| 6110 | | self._mouse_pause() |
| 6111 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6112 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 6113 | | m.pause(self._mouse_pause_position) |
| 6114 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6115 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 6116 | | p = self.view.picked_object(x, y) |
| 6117 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6118 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6119 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 6120 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 6121 | | beyond, |
| 6122 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6123 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6124 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 6125 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 6126 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6127 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6128 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 6129 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 6130 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6131 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6132 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 6133 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 6134 | | exclude=exclude) |
| 6135 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6136 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6137 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 6138 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 6139 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6140 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6141 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 6142 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 6143 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6144 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6145 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 6146 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 6147 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6148 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6149 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 6150 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 6151 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6152 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6153 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 6154 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 6155 | | ^^^^^^^^^ |
| 6156 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6157 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 6158 | | cget(self._c_pointers, n, pointer(values)) |
| 6159 | | ValueError: no active coordinate set |
| 6160 | | |
| 6161 | | ValueError: no active coordinate set |
| 6162 | | |
| 6163 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6164 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 6165 | | cget(self._c_pointers, n, pointer(values)) |
| 6166 | | |
| 6167 | | See log for complete Python traceback. |
| 6168 | | |
| 6169 | | Traceback (most recent call last): |
| 6170 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6171 | | packages\chimerax\core\updateloop.py", line 151, in _redraw_timer_callback |
| 6172 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
| 6173 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6174 | | packages\chimerax\mouse_modes\mousemodes.py", line 504, in |
| 6175 | | mouse_pause_tracking |
| 6176 | | self._mouse_pause() |
| 6177 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6178 | | packages\chimerax\mouse_modes\mousemodes.py", line 645, in _mouse_pause |
| 6179 | | m.pause(self._mouse_pause_position) |
| 6180 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6181 | | packages\chimerax\mouse_modes\std_modes.py", line 803, in pause |
| 6182 | | p = self.view.picked_object(x, y) |
| 6183 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6184 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6185 | | packages\chimerax\graphics\view.py", line 838, in picked_object |
| 6186 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
| 6187 | | beyond, |
| 6188 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6189 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6190 | | packages\chimerax\graphics\view.py", line 870, in picked_object_on_segment |
| 6191 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
| 6192 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6193 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6194 | | packages\chimerax\core\models.py", line 143, in first_intercept |
| 6195 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
| 6196 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6197 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6198 | | packages\chimerax\graphics\drawing.py", line 1069, in first_intercept |
| 6199 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
| 6200 | | exclude=exclude) |
| 6201 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6202 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6203 | | packages\chimerax\graphics\drawing.py", line 1086, in first_intercept_children |
| 6204 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
| 6205 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6206 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6207 | | packages\chimerax\atomic\structure.py", line 703, in first_intercept |
| 6208 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
| 6209 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6210 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6211 | | packages\chimerax\atomic\structure.py", line 736, in _position_intercepts |
| 6212 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
| 6213 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6214 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6215 | | packages\chimerax\atomic\structure.py", line 1188, in first_intercept |
| 6216 | | b, f = _bond_intercept(bonds, mxyz1, mxyz2) |
| 6217 | | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
| 6218 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6219 | | packages\chimerax\atomic\structure.py", line 2242, in _bond_intercept |
| 6220 | | cxyz1, cxyz2 = (a1.coords, a2.coords) |
| 6221 | | ^^^^^^^^^ |
| 6222 | | File "C:\Program Files\ChimeraX 1.8\bin\Lib\site- |
| 6223 | | packages\chimerax\atomic\molc.py", line 208, in get_prop |
| 6224 | | cget(self._c_pointers, n, pointer(values)) |
| 6225 | | ValueError: no active coordinate set |
| 6226 | | |
| 6227 | | ValueError: no active coordinate set |
| | 1279 | [deleted to fit within ticket limits] |
| | 1280 | |