Changes between Initial Version and Version 1 of Ticket #19546, comment 4


Ignore:
Timestamp:
Dec 29, 2025, 4:17:33 PM (3 weeks ago)
Author:
Tom Goddard

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  • Ticket #19546, comment 4

    initial v1  
    1 {{{
     1
    22Hi,
    33
    … …  
    1010Best,
    1111H
    12 
    13 From: ChimeraX <ChimeraX-bugs-admin@cgl.ucsf.edu>
    14 Date: Monday, December 29, 2025 at 4:48 PM
    15 To: chimerax-bug-report@cgl.ucsf.edu <chimerax-bug-report@cgl.ucsf.edu>, zjp@cgl.ucsf.edu <zjp@cgl.ucsf.edu>
    16 Cc: chimera-programmers@cgl.ucsf.edu <chimera-programmers@cgl.ucsf.edu>, Khanh Huy Bui, Dr <huy.bui@mcgill.ca>, huybk81@gmail.com <huybk81@gmail.com>
    17 Subject: Re: [ChimeraX] #19546: CiliaBuilder: scipy missing symbol in macOS 12 (was: CeliaBuilder: scipy missing symbol)
    18 
    19 [You don't often get email from chimerax-bugs-admin@cgl.ucsf.edu. Learn why this is important at https://aka.ms/LearnAboutSenderIdentification ]
    20 
    21 #19546: CiliaBuilder: scipy missing symbol in macOS 12
    22 --------------------------------------------+--------------------------
    23           Reporter:  chimerax-bug-report@…  |      Owner:  Zach Pearson
    24               Type:  defect                 |     Status:  assigned
    25           Priority:  normal                 |  Milestone:
    26          Component:  Third Party            |    Version:
    27         Resolution:                         |   Keywords:
    28         Blocked By:                         |   Blocking:
    29 Notify when closed:                         |   Platform:  all
    30            Project:  ChimeraX               |
    31 --------------------------------------------+--------------------------
    32 Changes (by Tom Goddard):
    33 
    34  * cc: huybk81@… (added)
    35  * owner:  Khanh Huy Bui => Zach Pearson
    36  * summary:  CeliaBuilder: scipy missing symbol => CiliaBuilder: scipy
    37      missing symbol in macOS 12
    38 
    39 Comment:
    40 
    41  The error is from importing SciPy on macOS 12 getting a missing symbol.
    42  ChimeraX mistakenly is including a version of SciPy that requires macOS
    43  14.  It should be including the version of SciPy available on PyPi that is
    44  compatible with macOS 12.  This same problem was reported in #17079 and
    45  was supposed to be fixed.
    46 --
    47 Ticket URL: <https://can01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.rbvi.ucsf.edu%2Ftrac%2FChimeraX%2Fticket%2F19546%23comment%3A3&data=05%7C02%7Chuy.bui%40mcgill.ca%7C11c0cb9438e343bcdb4208de47240e2a%7Ccd31967152e74a68afa9fcf8f89f09ea%7C0%7C0%7C639026417363523905%7CUnknown%7CTWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ%3D%3D%7C0%7C%7C%7C&sdata=wwWhbNG2T5iJ8i2ofGBtO%2BdHuXx3vVJEYDmhkmV7%2F8w%3D&reserved=0<https://www.rbvi.ucsf.edu/trac/ChimeraX/ticket/19546#comment:3>>
    48 ChimeraX <https://can01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.rbvi.ucsf.edu%2Fchimerax%2F&data=05%7C02%7Chuy.bui%40mcgill.ca%7C11c0cb9438e343bcdb4208de47240e2a%7Ccd31967152e74a68afa9fcf8f89f09ea%7C0%7C0%7C639026417363561556%7CUnknown%7CTWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ%3D%3D%7C0%7C%7C%7C&sdata=DGaWg%2BLdMbWXSAMC076mQQTYRJwACWk%2BmiDJsYKiz3Q%3D&reserved=0<https://www.rbvi.ucsf.edu/chimerax/>>
    49 ChimeraX Issue Tracker
    50 }}}