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Opened 23 hours ago
Last modified 22 hours ago
#19760 closed defect
Mutations scores adjust colors: ValueError: '#faffff' is not a built-in color name — at Version 1
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Structure Analysis | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description (last modified by )
The following bug report has been submitted:
Platform: macOS-15.7.3-arm64-arm-64bit
ChimeraX Version: 1.11rc202511270036 (2025-11-27 00:36:15 UTC)
Description
When clicking on 'Adjust Colors' in mutation coloring history panel somtimes it ends up not opening up the coloring panel.
Log:
You can double click a model's Name or ID in the model panel to edit those
fields
UCSF ChimeraX version: 1.11rc202511270036 (2025-11-27)
© 2016-2025 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/willowcoyote-maestas/Downloads/8efq.cif format mmcif
8efq.cif title:
DAMGO-bound mu-opioid receptor-Gi complex [more info...]
Chain information for 8efq.cif #1
---
Chain | Description | UniProt
A | Guanine nucleotide-binding protein G(i) subunit alpha-1 | GNAI1_HUMAN 1-354
B | Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | GBB1_RAT 2-340
G | Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | GBG2_BOVIN 1-68
P | DAMGO |
R | Mu-type opioid receptor | OPRM_HUMAN 2-368
Non-standard residues in 8efq.cif #1
---
ETA — ethanolamine
> open "/Users/willowcoyote-maestas/Library/CloudStorage/Box-Box/WCM
> Lab/Willow/MOR_analysis/012026/composite_dms_scores_chimera_fits.csv"
Duplicated mutation "p.(N9K)" at line 143
> open "/Users/willowcoyote-maestas/Library/CloudStorage/Box-Box/WCM
> Lab/Willow/MOR_analysis/012026/composite_dms_scores_chimera_fits.csv"
Summary of feedback from opening /Users/willowcoyote-
maestas/Library/CloudStorage/Box-Box/WCM
Lab/Willow/MOR_analysis/012026/composite_dms_scores_chimera_fits.csv
---
note | Plotted 7560 mutations with Boltz2_Buprenorphine_affinity on x-axis and Boltz2_Butorphanol_affinity on y-axis
Opened deep mutational scan data for 7832 mutations of 399 residues with score
names Boltz2_Buprenorphine_affinity, Boltz2_Butorphanol_affinity,
Boltz2_C6guano_affinity, Boltz2_DAMGO_affinity, Boltz2_FSK_affinity,
Boltz2_Fentanyl_affinity, Boltz2_MCAM_affinity, Boltz2_MP_affinity,
Boltz2_Methadone_affinity, Boltz2_Morphine_affinity,
Boltz2_Nalbuphine_affinity, Boltz2_Naloxone_affinity,
Boltz2_Naltrexone_affinity, Boltz2_PZM21_affinity, Boltz2_SR17018_affinity,
Boltz2_TRV130_affinity, Boltz2_carfentanil_affinity, Buprenorphine_effect,
Butorphanol_effect, C6guano_effect, DAMGO_ec50, DAMGO_effect, DAMGO_emax,
DAMGO_emin, DAMGO_range, FSK_effect, Fentanyl_ec50, Fentanyl_effect,
Fentanyl_emax, Fentanyl_emin, Fentanyl_range, Fentanyl_slope, MCAM_effect,
MP_effect, Methadone_effect, Morphine_ec50, Morphine_effect, Morphine_emax,
Morphine_emin, Morphine_range, Morphine_slope, Nalbuphine_effect,
Naloxone_effect, Naltrexone_effect, PZM21_effect, SR17018_effect,
Surface_effect, TRV130_effect, carfentanil_effect, position.
Mutation set composite_dms_scores_chimera_fits has 1 associated chains #1/R.
Drag select of 3410 atoms, 2 pseudobonds
> hide sel atoms
Drag select of 298 atoms
> hide sel atoms
Drag select of 160 atoms
> hide sel atoms
Drag select of 3178 atoms, 38 bonds
> show sel cartoons
> hide sel atoms
Drag select of 432 residues
> hide sel cartoons
> show sel cartoons
Drag select of 396 residues
Drag select of 469 residues, 2 pseudobonds
Drag select of 311 residues
> select clear
Drag select of 419 residues
> hide sel cartoons
> select
> /R:83,149-150,153-154,179,235,238-239,242,246,257,294-295,297-299,302,308,323-324,327-328
190 atoms, 184 bonds, 23 residues, 1 model selected
> show sel atoms
> select
> /R:76-77,107,122-123,125-126,129,135,142,145-146,149-150,153-154,156,186,194,217,219,234,242-243,246,252,298-299,308,320-321,324-325,327-329,334
315 atoms, 306 bonds, 37 residues, 1 model selected
> show sel atoms
Drag select of 262 atoms, 300 residues
> hide sel atoms
> select
> /R:69,76-77,79-80,93,96,107,111,113,115-116,118-120,122-123,125-126,129-132,135-137,142,145-146,149-150,152-154,156,158,169,186,194,198,201-202,204,206,208,210,212-213,215,217-219,223-224,234-235,237,239-240,242-243,246-247,252,257-258,260,263,267,291,295-300,308,312,315-316,320-321,324-329,332,334-335,339,341,347
778 atoms, 754 bonds, 94 residues, 1 model selected
> select
> /R:69,76-77,80,107,115,118,122-123,125-126,129,131,135-136,142,145-146,149-150,153-154,156,186,194,198,208,217,219,234-235,240,242-243,246,252,291,297-299,308,316,320-321,324-329,332,334
426 atoms, 410 bonds, 52 residues, 1 model selected
> show sel atoms
> select clear
> select
> /R:76-77,107,122-123,125-126,129,135,142,145-146,149-150,153-154,156,194,219,234,242-243,246,252,298-299,308,320-321,324,327-329,334
297 atoms, 290 bonds, 34 residues, 1 model selected
Drag select of 314 atoms, 241 residues
> hide sel atoms
> select clear
> select
> /R:76,107,122-123,125-126,129,135,142,145-146,149-150,153,219,234,242-243,246,252,298-299,321,324,327-329,334
233 atoms, 223 bonds, 28 residues, 1 model selected
> show sel atoms
> select clear
Drag select of 154 atoms, 306 residues
> hide sel atoms
[Repeated 5 time(s)]
> show sel atoms
> hide sel atoms
Drag select of 149 atoms, 301 residues
> hide sel atoms
> select clear
> select
> /R:77,80,84,94,100,108-109,115-116,120,122-123,126,135,144-145,149,151-154,156-157,159,163-164,166-167,170-171,173-175,177-178,180-183,189,193,196,201,207,219-220,233-235,241-243,246-247,249-250,254-257,261-262,277,279-280,284,286-287,289,291,294-296,298-299,301-302,318,321,323-325,327-331,334-335,337-341,346-347
778 atoms, 752 bonds, 96 residues, 1 model selected
> mutationscores define
> Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean fromScoreName
> Fentanyl_emax combine mean ranges "Surface_effect >= -0.241 and
> Surface_effect <= 0.315 and Fentanyl_emax >= -0.278 and Fentanyl_emax <=
> 0.192"
Defined score Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean
having range -0.277 to 0.0504 for 97 residues using 276 mutations
Set attribute Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean for
96 residues of chain #1/R
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> 0.0504,white:-0.0661,#ff7f7f:-0.182,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> ui tool show "Render/Select by Attribute"
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #!1 target
> sabc palette -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red
7046 atoms, 894 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> select
> /R:77,80-81,84,90-91,93-94,98,100,104-106,108-109,115-116,119-120,122-123,144,149,151-157,159,163-164,166-167,169-172,174-175,177-178,180-183,187,189-190,192-193,196,201,219,234,237-238,240-243,246-247,249-251,253-258,260-262,273,277-281,284,286-287,289-291,295-296,298-299,301-302,321,323,327-328,330-332,334-339,346-347
868 atoms, 841 bonds, 109 residues, 1 model selected
> select
> /R:76-77,80-81,84,90-91,93-94,98-100,104-106,108-109,115-116,119-120,122-123,144,149,151-157,159,163-164,166-167,169-172,174-175,177-178,180-184,187,189-190,192-193,196-197,201,219,234,237-238,240-243,246-247,249-251,253-258,260-262,273,277-281,284-287,289-291,295-296,298-302,321,323,327-332,334-340,344,346-348
948 atoms, 925 bonds, 119 residues, 1 model selected
> select
> /R:76-77,80,84,90-91,93-94,98-100,105-106,108,115-116,119-120,122-123,144,149,151-157,159,163-164,166-167,169-172,174-175,177-178,180-184,187,189-190,192-193,196-197,201,219,234,237-238,240-243,246-247,249-251,253-258,260-262,273,277-278,280-281,284-286,289,291,295-296,298-302,321,323,327-332,334-340,346-347
890 atoms, 866 bonds, 111 residues, 1 model selected
> mutationscores define
> Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean fromScoreName
> Morphine_emax combine mean ranges "Surface_effect >= -0.233 and
> Surface_effect <= 0.66 and Morphine_emax >= -0.402 and Morphine_emax <=
> 0.0591"
Defined score Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean
having range -0.402 to -0.0867 for 113 residues using 403 mutations
Set attribute Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean for
111 residues of chain #1/R
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.0867,white:-0.176,#ff7f7f:-0.265,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> ui tool show "Render/Select by Attribute"
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #!1 target
> sabc palette -0.401859,white:-0.280811,#ff7f7f:-0.169295,red
7046 atoms, 894 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> select clear
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401859,white:-0.280811,#ff7f7f:-0.169295,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401859,white:-0.280811,#ff7f7f:-0.169295,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401859,white:-0.280811,#ff7f7f:-0.169295,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401859,white:-0.280811,#ff7f7f:-0.169295,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> ui tool show "Render/Select by Attribute"
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #!1 target
> sabc palette -0.265236,red:-0.175961,#ff7f7f:-0.0866856,white noValueColor
> #faffff
7046 atoms, 894 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #!1 target
> sabc palette -0.399317,white:-0.289072,#ff7f7f:-0.202974,red noValueColor
> #faffff
7046 atoms, 894 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #!1 target
> sabc palette -0.399317,white:-0.256664,#ff7f7f:-0.168024,red noValueColor
> #faffff
7046 atoms, 894 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> ui tool show "Render/Select by Attribute"
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #!1 target
> sabc palette -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor
> #faffff
7046 atoms, 894 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #!1 target
> sabc palette -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor
> #faffff
7046 atoms, 894 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean #1/R palette
> -0.275025,white:-0.144407,#ff7f7f:-0.0266222,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.278_0.192_Surface_effect_-0.241_0.315_mean range -0.277 to
0.0504
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
#### Deleted thousands of lines to stay within Trac limit.
> color byattribute
> r:Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute #1/R
> palette 5.90102,white:25.2183,#7f7fff:42.1843,blue noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute range 5.9 to
81.7
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count range 1 to 15
> color byattribute
> r:Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute #1/R
> palette 5.90102,white:25.2183,#7f7fff:42.1843,blue noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute range 5.9 to
81.7
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute #1/R
> palette 5.90102,white:25.2183,#7f7fff:42.1843,blue noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute range 5.9 to
81.7
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute #1/R
> palette 5.90102,white:25.2183,#7f7fff:42.1843,blue noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute range 5.9 to
81.7
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute #1/R
> palette 5.90102,white:25.2183,#7f7fff:42.1843,blue noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute range 5.9 to
81.7
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute #1/R
> palette 5.90102,white:25.2183,#7f7fff:42.1843,blue noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute range 5.9 to
81.7
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute #1/R
> palette 5.90102,white:25.2183,#7f7fff:42.1843,blue noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute range 5.9 to
81.7
> color byattribute
> r:DAMGO_emin_-0.352_0.618_Surface_effect_-0.225_0.673_count #1/R palette
> 1,#f2f5f2:5,#f58885:10,red noValueColor #faffff
2272 atoms, 283 residues, atom
DAMGO_emin_-0.352_0.618_Surface_effect_-0.225_0.673_count range 1 to 17
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:DAMGO_emin_-0.352_0.618_Surface_effect_-0.225_0.673_count #1/R palette
> 1,#f2f5f2:5,#f58885:10,red noValueColor #faffff
2272 atoms, 283 residues, atom
DAMGO_emin_-0.352_0.618_Surface_effect_-0.225_0.673_count range 1 to 17
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:DAMGO_emin_-0.352_0.618_Surface_effect_-0.225_0.673_count #1/R palette
> 1,#f2f5f2:5,#f58885:10,red noValueColor #faffff
2272 atoms, 283 residues, atom
DAMGO_emin_-0.352_0.618_Surface_effect_-0.225_0.673_count range 1 to 17
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute r:Fentanyl_ec50_0.941_3.82_Morphine_ec50_5.13_7.69_count
> #1/R palette 1,white:1.49,#7f7fff:1.98,blue noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_ec50_0.941_3.82_Morphine_ec50_5.13_7.69_count range 1 to 3
> color byattribute
> r:Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count range 1 to 15
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count range 1 to 15
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count range 1 to 15
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count range 1 to 15
> color byattribute r:DAMGO_ec50_2.73_5.93_Surface_effect_-0.234_0.592_count
> #1/R palette 1,white:6.77,#7f7fff:12.5,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.73_5.93_Surface_effect_-0.234_0.592_count range 1 to 19
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count range 1 to 15
> color byattribute
> r:Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute #1/R
> palette 5.90102,white:25.2183,#7f7fff:42.1843,blue noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute range 5.9 to
81.7
> color byattribute
> r:Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count range 1 to 15
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count range 1 to 15
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count range 1 to 15
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count range 1 to 15
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count range 1 to 15
> color byattribute
> r:Morphine_ec50_5.13_7.41_Surface_effect_-0.237_0.393_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_ec50_5.13_7.41_Surface_effect_-0.237_0.393_count range 1 to 15
> color byattribute r:DAMGO_ec50_2.73_5.93_Surface_effect_-0.234_0.592_count
> #1/R palette 1,white:6.77,#7f7fff:12.5,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.73_5.93_Surface_effect_-0.234_0.592_count range 1 to 19
> color byattribute
> r:DAMGO_emin_-0.352_0.618_Surface_effect_-0.225_0.673_count #1/R palette
> 1,#f2f5f2:5,#f58885:10,red noValueColor #faffff
2272 atoms, 283 residues, atom
DAMGO_emin_-0.352_0.618_Surface_effect_-0.225_0.673_count range 1 to 17
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> lighting shadows false
> graphics silhouettes true
> set bgColor white
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> color byattribute
> r:Fentanyl_emax_-0.35_0.283_Surface_effect_-0.233_0.644_count #1/R palette
> 1,white:5,#ff7f7f:10,red noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.35_0.283_Surface_effect_-0.233_0.644_count range 1 to 17
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> color byattribute
> r:Fentanyl_emax_-0.35_0.283_Surface_effect_-0.233_0.644_count #1/R palette
> 1,white:5,#ff7f7f:10,red noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.35_0.283_Surface_effect_-0.233_0.644_count range 1 to 17
> color byattribute
> r:DAMGO_emin_-0.352_0.618_Surface_effect_-0.225_0.673_count #1/R palette
> 1,#f2f5f2:5,#f58885:10,red noValueColor #faffff
2272 atoms, 283 residues, atom
DAMGO_emin_-0.352_0.618_Surface_effect_-0.225_0.673_count range 1 to 17
> color byattribute
> r:Fentanyl_emax_-0.35_0.283_Surface_effect_-0.233_0.644_count #1/R palette
> 1,white:5,#ff7f7f:10,red noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.35_0.283_Surface_effect_-0.233_0.644_count range 1 to 17
> color byattribute
> r:Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count #1/R palette
> 1,#f5f3f3:6,#ffa4a3:12,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count range 1 to 16
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count #1/R palette
> 1,#f5f3f3:6,#ffa4a3:12,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count range 1 to 16
> color byattribute
> r:Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean #1/R palette
> -0.401873,white:-0.249038,#ff7f7f:-0.17565,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.402_0.0591_Surface_effect_-0.233_0.66_mean range -0.402 to
-0.0867
> color byattribute
> r:Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count #1/R palette
> 1,#f5f3f3:6,#ffa4a3:12,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count range 1 to 16
> color byattribute
> r:Fentanyl_emax_-0.35_0.283_Surface_effect_-0.233_0.644_count #1/R palette
> 1,white:5,#ff7f7f:10,red noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.35_0.283_Surface_effect_-0.233_0.644_count range 1 to 17
> color byattribute
> r:Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count #1/R palette
> 1,#f5f3f3:6,#ffa4a3:12,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count range 1 to 16
> color byattribute
> r:Fentanyl_emax_-0.35_0.283_Surface_effect_-0.233_0.644_count #1/R palette
> 1,white:5,#ff7f7f:10,red noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.35_0.283_Surface_effect_-0.233_0.644_count range 1 to 17
> color byattribute
> r:DAMGO_emin_-0.352_0.618_Surface_effect_-0.225_0.673_count #1/R palette
> 1,#f2f5f2:5,#f58885:10,red noValueColor #faffff
2272 atoms, 283 residues, atom
DAMGO_emin_-0.352_0.618_Surface_effect_-0.225_0.673_count range 1 to 17
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute r:DAMGO_ec50_2.73_5.93_Surface_effect_-0.234_0.592_count
> #1/R palette 1,white:6.77,#7f7fff:12.5,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.73_5.93_Surface_effect_-0.234_0.592_count range 1 to 19
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count range 1 to 15
> color byattribute
> r:Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.73_7.77_Surface_effect_-0.234_0.429_count range 1 to 15
> color byattribute
> r:Morphine_ec50_5.13_7.41_Surface_effect_-0.237_0.393_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_ec50_5.13_7.41_Surface_effect_-0.237_0.393_count range 1 to 15
> color byattribute
> r:Morphine_ec50_5.13_7.41_Surface_effect_-0.237_0.393_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_ec50_5.13_7.41_Surface_effect_-0.237_0.393_count range 1 to 15
> color byattribute
> r:DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute #1/R palette
> 2.68,white:26,#7f7fff:49.4,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.67_6.26_Surface_effect_-0.233_0.74_sum_absolute range 2.68 to
74.9
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> color byattribute
> r:Morphine_ec50_5.13_7.41_Surface_effect_-0.237_0.393_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_ec50_5.13_7.41_Surface_effect_-0.237_0.393_count range 1 to 15
> color byattribute
> r:Morphine_ec50_5.13_7.41_Surface_effect_-0.237_0.393_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_ec50_5.13_7.41_Surface_effect_-0.237_0.393_count range 1 to 15
> color byattribute
> r:Fentanyl_emax_-0.351_0.0992_Morphine_emax_-0.71_-0.403_count #1/R palette
> 1,white:4.79,#ff7f7f:8.58,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.351_0.0992_Morphine_emax_-0.71_-0.403_count range 1 to 13
> color byattribute
> r:Morphine_ec50_5.13_7.41_Surface_effect_-0.237_0.393_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_ec50_5.13_7.41_Surface_effect_-0.237_0.393_count range 1 to 15
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> color byattribute
> r:Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count #1/R palette
> 1,#f5f3f3:6,#ffa4a3:12,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count range 1 to 16
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> color byattribute
> r:Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count #1/R palette
> 1,#f5f3f3:6,#ffa4a3:12,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count range 1 to 16
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> color byattribute
> r:Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count #1/R palette
> 1,#f5f3f3:6,#ffa4a3:12,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count range 1 to 16
> color byattribute
> r:Morphine_ec50_5.13_7.41_Surface_effect_-0.237_0.393_count #1/R palette
> 1,white:5.45,#7f7fff:9.9,blue noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_ec50_5.13_7.41_Surface_effect_-0.237_0.393_count range 1 to 15
> color byattribute
> r:Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count #1/R palette
> 1,#f5f3f3:6,#ffa4a3:12,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count range 1 to 16
> color byattribute
> r:Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute #1/R
> palette 5.90102,white:25.2183,#7f7fff:42.1843,blue noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute range 5.9 to
81.7
> color byattribute
> r:Fentanyl_emax_-0.35_0.283_Surface_effect_-0.233_0.644_count #1/R palette
> 1,white:5,#ff7f7f:10,red noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.35_0.283_Surface_effect_-0.233_0.644_count range 1 to 17
> color byattribute
> r:Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute #1/R
> palette 5.90102,white:25.2183,#7f7fff:42.1843,blue noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute range 5.9 to
81.7
> color byattribute
> r:Fentanyl_emax_-0.35_0.283_Surface_effect_-0.233_0.644_count #1/R palette
> 1,white:5,#ff7f7f:10,red noValueColor #faffff
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.35_0.283_Surface_effect_-0.233_0.644_count range 1 to 17
> select clear
[Repeated 3 time(s)]
> select
> /R:89,107,112,126,135,149,155,159,166,173,182,186,203,207,220,250,262,289,293,295,298-299,301-303,321,324-325,327-328,336-337,345
277 atoms, 262 bonds, 33 residues, 1 model selected
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> select clear
> color byattribute
> r:Fentanyl_emax_-0.351_0.0992_Morphine_emax_-0.71_-0.403_count #1/R palette
> 1,white:4.79,#ff7f7f:8.58,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.351_0.0992_Morphine_emax_-0.71_-0.403_count range 1 to 13
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> select /R:201
4 atoms, 3 bonds, 1 residue, 1 model selected
> select /R:197
6 atoms, 5 bonds, 1 residue, 1 model selected
> select /R:174
7 atoms, 7 bonds, 1 residue, 1 model selected
> select /R:280
8 atoms, 7 bonds, 1 residue, 1 model selected
> select /R:261
8 atoms, 7 bonds, 1 residue, 1 model selected
> color byattribute
> r:Fentanyl_emax_-0.351_0.0992_Morphine_emax_-0.71_-0.403_count #1/R palette
> 1,white:4.79,#ff7f7f:8.58,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.351_0.0992_Morphine_emax_-0.71_-0.403_count range 1 to 13
> select /R:327
4 atoms, 3 bonds, 1 residue, 1 model selected
> select /R:328
12 atoms, 12 bonds, 1 residue, 1 model selected
> select /R:149-150,153,242,246,295,297-299,327
83 atoms, 82 bonds, 10 residues, 1 model selected
> select /R:149-150,153,179,235,298-299,302,308,324
85 atoms, 79 bonds, 10 residues, 1 model selected
> select /R:149-150,153,179,235,242,295,298-299,302,327
93 atoms, 88 bonds, 11 residues, 1 model selected
> select
> /R:77,122-123,125-126,135,142,145,149-150,154,186,219,243,246,298-299,321,324-325,327-329
198 atoms, 194 bonds, 23 residues, 1 model selected
> ui tool show "Render/Select by Attribute"
> color byattribute
> r:Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count #1/R palette
> 1,white:3.47,#ff7f7f:5.94,red noValueColor white
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0703_Fentanyl_emax_-0.748_-0.355_count range 1 to 9
> ui tool show "Render/Select by Attribute"
> color byattribute
> r:Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute #1/R
> palette 5.18,white:31.4,#7f7fff:57.5,blue noValueColor white
2272 atoms, 283 residues, atom
Morphine_ec50_5.18_7.38_Surface_effect_-0.237_0.592_sum_absolute range 5.18 to
87.2
> ui tool show "Render/Select by Attribute"
> color byattribute r:DAMGO_ec50_2.73_5.93_Surface_effect_-0.234_0.592_count
> #1/R palette 1,white:6.77,#7f7fff:12.5,blue noValueColor white
2272 atoms, 283 residues, atom
DAMGO_ec50_2.73_5.93_Surface_effect_-0.234_0.592_count range 1 to 19
> ui tool show "Render/Select by Attribute"
[Repeated 2 time(s)]
> color byattribute
> r:Fentanyl_emax_-0.351_0.0992_Morphine_emax_-0.71_-0.403_count #1/R palette
> 1,white:4.79,#ff7f7f:8.58,red noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_emax_-0.351_0.0992_Morphine_emax_-0.71_-0.403_count range 1 to 13
> ui tool show "Render/Select by Attribute"
> color byattribute
> r:Surface_effect_-0.234_0.592_DAMGO_ec50_2.73_5.93_sum_absolute #1/R palette
> 0.00276414,white:1.49618,#7f7fff:2.43921,blue noValueColor white
2272 atoms, 283 residues, atom
Surface_effect_-0.234_0.592_DAMGO_ec50_2.73_5.93_sum_absolute range 0.00276 to
3.16
> ui tool show "Render/Select by Attribute"
> mutationscores define
> Boltz2_Fentanyl_affinity_-1.01_0.446_Fentanyl_emax_-0.241_0.131_mean
> fromScoreName Boltz2_Fentanyl_affinity combine mean ranges
> "Boltz2_Fentanyl_affinity >= -1.01 and Boltz2_Fentanyl_affinity <= 0.446 and
> Fentanyl_emax >= -0.241 and Fentanyl_emax <= 0.131"
Defined score
Boltz2_Fentanyl_affinity_-1.01_0.446_Fentanyl_emax_-0.241_0.131_mean having
range -0.998 to -0.0799 for 22 residues using 72 mutations
Set attribute
Boltz2_Fentanyl_affinity_-1.01_0.446_Fentanyl_emax_-0.241_0.131_mean for 22
residues of chain #1/R
> color byattribute
> r:Boltz2_Fentanyl_affinity_-1.01_0.446_Fentanyl_emax_-0.241_0.131_mean #1/R
> palette -0.0799,white:-0.369,#7f7fff:-0.659,blue noValueColor white
2272 atoms, 283 residues, atom
Boltz2_Fentanyl_affinity_-1.01_0.446_Fentanyl_emax_-0.241_0.131_mean range
-0.998 to -0.0799
> color byattribute
> r:Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute #1/R
> palette 5.90102,white:25.2183,#7f7fff:42.1843,blue noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_ec50_5.9_8.32_Surface_effect_-0.239_0.484_sum_absolute range 5.9 to
81.7
> color byattribute r:Fentanyl_ec50_0.941_3.82_Morphine_ec50_5.13_7.69_count
> #1/R palette 1,white:1.49,#7f7fff:1.98,blue noValueColor white
2272 atoms, 283 residues, atom
Fentanyl_ec50_0.941_3.82_Morphine_ec50_5.13_7.69_count range 1 to 3
> ui tool show "Render/Select by Attribute"
> color byattribute
> r:Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count #1/R palette
> 1,#f5f3f3:6,#ffa4a3:12,red noValueColor #faffff
2272 atoms, 283 residues, atom
Morphine_emax_-0.398_0.0811_Surface_effect_-0.236_0.655_count range 1 to 16
> ui tool show "Render/Select by Attribute"
Traceback (most recent call last):
File
"/Applications/ChimeraX-1.11-rc2025.11.27.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/ui/widgets/color_button.py", line 159, in
color_to_numpy_rgba8
color = BuiltinColors[color]
~~~~~~~~~~~~~^^^^^^^
KeyError: '#faffff'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File
"/Applications/ChimeraX-1.11-rc2025.11.27.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/mutation_scores/ms_color_history.py", line 218, in
_adjust_colors
_show_render_by_attribute_panel(self.session, mset, attribute_name,
File
"/Applications/ChimeraX-1.11-rc2025.11.27.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/mutation_scores/ms_scatter_plot.py", line 777, in
_show_render_by_attribute_panel
rba_gui.no_value_color.color = no_value_color
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File
"/Applications/ChimeraX-1.11-rc2025.11.27.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/ui/widgets/color_button.py", line 82, in set_color
rgba = color_to_numpy_rgba8(color)
^^^^^^^^^^^^^^^^^^^^^^^^^^^
File
"/Applications/ChimeraX-1.11-rc2025.11.27.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/ui/widgets/color_button.py", line 161, in
color_to_numpy_rgba8
raise ValueError("'%s' is not a built-in color name" % color)
ValueError: '#faffff' is not a built-in color name
ValueError: '#faffff' is not a built-in color name
File
"/Applications/ChimeraX-1.11-rc2025.11.27.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
packages/chimerax/ui/widgets/color_button.py", line 161, in
color_to_numpy_rgba8
raise ValueError("'%s' is not a built-in color name" % color)
See log for complete Python traceback.
> save "/Users/willowcoyote-maestas/Library/CloudStorage/Box-Box/WCM
> Lab/Willow/MOR_analysis/012026/mor_scores_012126.cxs"
OpenGL version: 4.1 Metal - 89.4
OpenGL renderer: Apple M1 Pro
OpenGL vendor: Apple
Python: 3.11.9
Locale: en_US.UTF-8
Qt version: PyQt6 6.9.1, Qt 6.9.0
Qt runtime version: 6.9.2
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro18,3
Model Number: MKGQ3LL/A
Chip: Apple M1 Pro
Total Number of Cores: 10 (8 performance and 2 efficiency)
Memory: 16 GB
System Firmware Version: 13822.61.10
OS Loader Version: 11881.140.96
Software:
System Software Overview:
System Version: macOS 15.7.3 (24G419)
Kernel Version: Darwin 24.6.0
Time since boot: 10 days, 10 hours, 10 minutes
Graphics/Displays:
Apple M1 Pro:
Chipset Model: Apple M1 Pro
Type: GPU
Bus: Built-In
Total Number of Cores: 16
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
Color LCD:
Display Type: Built-in Liquid Retina XDR Display
Resolution: 3024 x 1964 Retina
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Installed Packages:
aiohappyeyeballs: 2.6.1
aiohttp: 3.13.1
aiosignal: 1.4.0
alabaster: 1.0.0
annotated-types: 0.7.0
anyio: 4.11.0
appdirs: 1.4.4
appnope: 0.1.4
asttokens: 3.0.1
attrs: 25.4.0
babel: 2.17.0
beautifulsoup4: 4.13.5
blockdiag: 3.0.0
blosc2: 3.11.1
build: 1.3.0
certifi: 2025.7.14
cftime: 1.6.5
charset-normalizer: 3.4.4
ChimeraX-AddCharge: 1.5.20
ChimeraX-AddH: 2.2.8
ChimeraX-AlignmentAlgorithms: 2.0.2
ChimeraX-AlignmentHdrs: 3.6.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 3.1.1
ChimeraX-AlphaFold: 1.0.1
ChimeraX-AltlocExplorer: 1.2
ChimeraX-AmberInfo: 1.0
ChimeraX-Animations: 1.0
ChimeraX-Aniso: 1.3.2
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.61.4
ChimeraX-AtomicLibrary: 14.2.1
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.4
ChimeraX-BasicActions: 1.1.3
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 3.0.0
ChimeraX-Boltz: 1.1
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.2
ChimeraX-BuildStructure: 2.13.1
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.6.0
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.4
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.5
ChimeraX-ChemGroup: 2.0.2
ChimeraX-Clashes: 2.3
ChimeraX-ColorActions: 1.0.5
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.8
ChimeraX-CommandLine: 1.3.0
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.11rc202511270036
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.5
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.4
ChimeraX-Dicom: 1.2.7
ChimeraX-DistMonitor: 1.4.2
ChimeraX-DockPrep: 1.1.4
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.4.1
ChimeraX-Hbonds: 2.5.3
ChimeraX-Help: 1.3
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.4
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-KVFinder: 1.7.2
ChimeraX-Label: 1.2
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.2.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.2
ChimeraX-Map: 1.3
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.2.2
ChimeraX-MCopy: 1.0
ChimeraX-MCPServer: 0.1.0
ChimeraX-MDcrds: 2.17.2
ChimeraX-MedicalToolbar: 1.1
ChimeraX-Meeting: 1.0.1
ChimeraX-Minimize: 1.3.2
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.16
ChimeraX-MMTF: 2.2
ChimeraX-ModelArchive: 1.0
ChimeraX-Modeller: 1.5.22
ChimeraX-ModelPanel: 1.6
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0.1
ChimeraX-MutationScores: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.2
ChimeraX-NMRSTAR: 1.0.2
ChimeraX-NRRD: 1.2
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.15.2
ChimeraX-OrthoPick: 1.0.1
ChimeraX-PDB: 2.7.11
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.5
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1.4
ChimeraX-ProfileGrids: 1.4.1
ChimeraX-PubChem: 2.2
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.6.5
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.3.3
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.2
ChimeraX-Scenes: 0.3.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.3
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-Segmentations: 3.5.10
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.17.3
ChimeraX-Shape: 1.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.2.1
ChimeraX-ShowSequences: 1.0.3
ChimeraX-SideView: 1.0.1
ChimeraX-SimilarStructures: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.19.1
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.2.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.5.2
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.2.3
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.49.1
ChimeraX-Umap: 1.0
ChimeraX-uniprot: 2.3.2
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDock: 1.5.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.5
ChimeraX-Zone: 1.0.1
click: 8.3.1
colorama: 0.4.6
comm: 0.2.3
contourpy: 1.3.3
coverage: 7.12.0
cxservices: 1.2.3
cycler: 0.12.1
Cython: 3.1.4
debugpy: 1.8.17
decorator: 5.2.1
docutils: 0.21.2
executing: 2.2.1
filelock: 3.19.1
fonttools: 4.60.1
frozenlist: 1.8.0
funcparserlib: 2.0.0a0
glfw: 2.10.0
grako: 3.16.5
h11: 0.16.0
h5py: 3.15.1
html2text: 2025.4.15
httpcore: 1.0.9
httpx: 0.28.1
httpx-sse: 0.4.3
idna: 3.11
ihm: 2.2
imagecodecs: 2024.6.1
imagesize: 1.4.1
iniconfig: 2.3.0
ipykernel: 6.30.1
ipython: 9.5.0
ipython_pygments_lexers: 1.1.1
ipywidgets: 8.1.8
jedi: 0.19.2
Jinja2: 3.1.6
jsonschema: 4.25.1
jsonschema-specifications: 2025.9.1
jupyter_client: 8.6.3
jupyter_core: 5.9.1
jupyterlab_widgets: 3.0.16
kiwisolver: 1.4.9
line_profiler: 5.0.0
lxml: 6.0.2
lz4: 4.3.2
Markdown: 3.8.2
MarkupSafe: 3.0.3
matplotlib: 3.10.7
matplotlib-inline: 0.2.1
mcp: 1.18.0
msgpack: 1.1.1
multidict: 6.7.0
ndindex: 1.10.1
nest-asyncio: 1.6.0
netCDF4: 1.6.5
networkx: 3.3
nibabel: 5.2.0
nptyping: 2.5.0
numexpr: 2.14.1
numpy: 1.26.4
OpenMM: 8.2.0
openvr: 1.26.701
packaging: 25.0
ParmEd: 4.2.2
parso: 0.8.5
pep517: 0.13.1
pexpect: 4.9.0
pickleshare: 0.7.5
pillow: 11.3.0
pip: 25.2
pkginfo: 1.12.1.2
platformdirs: 4.5.0
pluggy: 1.6.0
prompt_toolkit: 3.0.52
propcache: 0.4.1
psutil: 7.0.0
ptyprocess: 0.7.0
pure_eval: 0.2.3
py-cpuinfo: 9.0.0
pybind11: 3.0.1
pycollada: 0.8
pydantic: 2.12.5
pydantic-settings: 2.12.0
pydantic_core: 2.41.5
pydicom: 2.4.4
Pygments: 2.18.0
pynmrstar: 3.3.6
pynrrd: 1.0.0
PyOpenGL: 3.1.10
PyOpenGL-accelerate: 3.1.10
pyopenxr: 1.1.4501
pyparsing: 3.2.5
pyproject_hooks: 1.2.0
PyQt6-commercial: 6.9.1
PyQt6-Qt6: 6.9.2
PyQt6-WebEngine-commercial: 6.9.0
PyQt6-WebEngine-Qt6: 6.9.2
PyQt6_sip: 13.10.2
pytest: 9.0.1
pytest-cov: 7.0.0
python-dateutil: 2.9.0.post0
python-dotenv: 1.2.1
python-multipart: 0.0.20
pytz: 2025.2
pyzmq: 27.1.0
qtconsole: 5.7.0
QtPy: 2.4.3
qtshim: 1.2
RandomWords: 0.4.0
referencing: 0.37.0
requests: 2.32.5
roman-numerals-py: 3.1.0
rpds-py: 0.29.0
scipy: 1.14.0
setuptools: 80.9.0
sfftk-rw: 0.8.1
six: 1.17.0
sniffio: 1.3.1
snowballstemmer: 3.0.1
sortedcontainers: 2.4.0
soupsieve: 2.8
Sphinx: 8.2.3
sphinx-autodoc-typehints: 3.2.0
sphinxcontrib-applehelp: 2.0.0
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 2.0.0
sphinxcontrib-htmlhelp: 2.1.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 2.0.0
sphinxcontrib-serializinghtml: 2.0.0
sse-starlette: 3.0.3
stack-data: 0.6.3
starlette: 0.50.0
superqt: 0.7.6
tables: 3.10.2
tcia_utils: 1.5.1
tifffile: 2025.3.13
tinyarray: 1.2.5
tornado: 6.5.2
traitlets: 5.14.3
typing-inspection: 0.4.2
typing_extensions: 4.15.0
tzdata: 2025.2
urllib3: 2.5.0
uvicorn: 0.38.0
wcwidth: 0.2.14
webcolors: 24.11.1
wheel: 0.45.1
wheel-filename: 1.4.2
widgetsnbextension: 4.0.15
yarl: 1.22.0
File attachment: mor_scores_012126.cxs
Change History (2)
by , 23 hours ago
| Attachment: | mor_scores_012126.cxs added |
|---|
comment:1 by , 22 hours ago
| Component: | Unassigned → Structure Analysis |
|---|---|
| Description: | modified (diff) |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Mutations scores adjust colors: ValueError: '#faffff' is not a built-in color name |
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