id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 20290 Crash in swap_buffers after expose event chimerax-bug-report@… Tom Goddard "{{{ The following bug report has been submitted: Platform: macOS-26.3.1-arm64-arm-64bit ChimeraX Version: 1.11.1 (2026-01-23 05:51:34 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. Fatal Python error: Bus error Current thread 0x0000000209e3b100 (most recent call first): File ""/Applications/ChimeraX-1.11.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/opengl.py"", line 248 in swap_buffers File ""/Applications/ChimeraX-1.11.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/opengl.py"", line 561 in swap_buffers File ""/Applications/ChimeraX-1.11.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/statusbar.py"", line 166 in status File ""/Applications/ChimeraX-1.11.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/statusbar.py"", line 98 in _expose_event File ""/Applications/ChimeraX-1.11.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/gui.py"", line 414 in event_loop File ""/Applications/ChimeraX-1.11.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py"", line 1064 in init File ""/Applications/ChimeraX-1.11.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py"", line 1229 in File """", line 88 in _run_code File """", line 198 in _run_module_as_main Extension modules: chimerax.arrays._arrays, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, PyQt6.QtNetwork, PyQt6.QtPrintSupport, PyQt6.QtWebChannel, PyQt6.QtWebEngineCore, PyQt6.QtWebEngineWidgets, 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Once 32K 1 MALLOC 247.2M 66 MALLOC guard page 3648K 4 Mach message 64K 3 OpenGL GLSL 256K 3 PROTECTED_MEMORY 16K 1 STACK GUARD 576K 36 Stack 199.2M 37 Stack Guard 56.0M 1 VM_ALLOCATE 150.7M 150 VM_ALLOCATE (reserved) 160.0M 1 reserved VM address space (unallocated) __AUTH 5968K 656 __AUTH_CONST 90.5M 1042 __CTF 824 1 __DATA 42.5M 1125 __DATA_CONST 59.3M 1171 __DATA_DIRTY 8499K 899 __FONT_DATA 2352 1 __GLSLBUILTINS 5176K 1 __INFO_FILTER 8 1 __LINKEDIT 617.7M 125 __OBJC_RO 78.4M 1 __OBJC_RW 2571K 1 __TEXT 1.5G 1175 __TEXT (graphics) 11.5M 19 __TPRO_CONST 128K 2 dyld private memory 1200K 12 mapped file 618.7M 75 page table in kernel 1092K 1 shared memory 3168K 23 =========== ======= ======= TOTAL 3.8G 6761 TOTAL, minus reserved VM space 3.7G 6761 "", ""legacyInfo"" : { ""threadTriggered"" : { ""name"" : ""CrBrowserMain"", ""queue"" : ""com.apple.main-thread"" } }, ""logWritingSignature"" : ""fd6f32e5bd3f71531b27d73b3947e281e29c7d31"", ""roots_installed"" : 0, ""bug_type"" : ""309"", ""trmStatus"" : 2048, ""trialInfo"" : { ""rollouts"" : [ { ""rolloutId"" : ""6297d96be2c9387df974efa4"", ""factorPackIds"" : [ ], ""deploymentId"" : 240000032 }, { ""rolloutId"" : ""5f72dc58705eff005a46b3a9"", ""factorPackIds"" : [ ], ""deploymentId"" : 240000015 } ], ""experiments"" : [ ] } } ===== Log before crash start ===== UCSF ChimeraX version: 1.11.1 (2026-01-23) © 2016-2025 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open > /Users/franciscomachancoseshernandez/Desktop/TFM/Proteínas/BCL2/5VAU_ref_AE_clean.pdb 5VAU_ref_AE_clean.pdb title: BCL-2 complex with beclin 1 BH3 domain [more info...] Chain information for 5VAU_ref_AE_clean.pdb #1 --- Chain | Description | UniProt A | apoptosis regulator BCL-2 -- BCL-2-like protein 1 chimera | BCL2_HUMAN 1-75 92-207 E | beclin-1 | BECN1_HUMAN 105-130 140 atoms have alternate locations. Control/examine alternate locations with Altloc Explorer [start tool...] or the altlocs command. 1476 atoms have anisotropic B-factors. Depict anisotropic information with Thermal Ellipsoids [start tool...] or the aniso command. > color bychain > info chains chain id /A chain_id A chain id /E chain_id E > select /E 150 atoms, 144 bonds, 26 residues, 1 model selected > select zone sel 5 residues true Selected 274 atoms > select sel & /A 274 atoms, 259 bonds, 40 residues, 1 model selected > info selection atom id /A:100@N idatm_type Npl atom id /A:100@CA idatm_type C3 atom id /A:100@C idatm_type C2 atom id /A:100@O idatm_type O2 atom id /A:100@CB idatm_type C3 atom id /A:103@N idatm_type Npl atom id /A:103@CA idatm_type C3 atom id /A:103@C idatm_type C2 atom id /A:103@O idatm_type O2 atom id /A:103@CB idatm_type C3 atom id /A:103@CG idatm_type Cac atom id /A:103@OD1 idatm_type O2- atom id /A:103@OD2 idatm_type O2- atom id /A:104@N idatm_type Npl atom id /A:104@CA idatm_type C3 atom id /A:104@C idatm_type C2 atom id /A:104@O idatm_type O2 atom id /A:104@CB idatm_type C3 atom id /A:104@CG idatm_type Car atom id /A:104@CD1 idatm_type Car atom id /A:104@CD2 idatm_type Car atom id /A:104@CE1 idatm_type Car atom id /A:104@CE2 idatm_type Car atom id /A:104@CZ idatm_type Car atom id /A:107@N idatm_type Npl atom id /A:107@CA idatm_type C3 atom id /A:107@C idatm_type C2 atom id /A:107@O idatm_type O2 atom id /A:107@CB idatm_type C3 atom id /A:107@CG idatm_type C3 atom id /A:107@CD idatm_type C3 atom id /A:107@NE idatm_type Ng+ atom id /A:107@CZ idatm_type C2 atom id /A:107@NH1 idatm_type Ng+ atom id /A:107@NH2 idatm_type Ng+ atom id /A:108@N idatm_type Npl atom id /A:108@CA idatm_type C3 atom id /A:108@C idatm_type C2 atom id /A:108@O idatm_type O2 atom id /A:108@CB idatm_type C3 atom id /A:108@CG idatm_type Car atom id /A:108@CD1 idatm_type Car atom id /A:108@CD2 idatm_type Car atom id /A:108@CE1 idatm_type Car atom id /A:108@CE2 idatm_type Car atom id /A:108@CZ idatm_type Car atom id /A:108@OH idatm_type O3 atom id /A:112@N idatm_type Npl atom id /A:112@CA idatm_type C3 atom id /A:112@C idatm_type C2 atom id /A:112@O idatm_type O2 atom id /A:112@CB idatm_type C3 atom id /A:112@CG idatm_type Car atom id /A:112@CD1 idatm_type Car atom id /A:112@CD2 idatm_type Car atom id /A:112@CE1 idatm_type Car atom id /A:112@CE2 idatm_type Car atom id /A:112@CZ idatm_type Car atom id /A:113@N idatm_type Npl atom id /A:113@CA idatm_type C3 atom id /A:113@C idatm_type C2 atom id /A:113@O idatm_type O2 atom id /A:115@N idatm_type Npl atom id /A:115@CA idatm_type C3 atom id /A:115@C idatm_type C2 atom id /A:115@O idatm_type O2 atom id /A:115@CB idatm_type C3 atom id /A:115@CG idatm_type C3 atom id /A:115@SD idatm_type S3 atom id /A:115@CE idatm_type C3 atom id /A:118@N idatm_type Npl atom id /A:118@CA idatm_type C3 atom id /A:118@C idatm_type C2 atom id /A:118@O idatm_type O2 atom id /A:118@CB idatm_type C3 atom id /A:118@CG idatm_type C3 atom id /A:119@N idatm_type Npl atom id /A:119@CA idatm_type C3 atom id /A:119@C idatm_type C2 atom id /A:119@O idatm_type O2 atom id /A:119@CB idatm_type C3 atom id /A:119@CG idatm_type C3 atom id /A:119@CD1 idatm_type C3 atom id /A:119@CD2 idatm_type C3 atom id /A:129@N idatm_type Npl atom id /A:129@CA idatm_type C3 atom id /A:129@C idatm_type C2 atom id /A:129@O idatm_type O2 atom id /A:129@CB idatm_type C3 atom id /A:129@CG idatm_type C3 atom id /A:129@CD idatm_type C3 atom id /A:129@NE idatm_type Ng+ atom id /A:129@CZ idatm_type C2 atom id /A:129@NH1 idatm_type Ng+ atom id /A:129@NH2 idatm_type Ng+ atom id /A:132@N idatm_type Npl atom id /A:132@CA idatm_type C3 atom id /A:132@C idatm_type C2 atom id /A:132@O idatm_type O2 atom id /A:132@CB idatm_type C3 atom id /A:132@OG1 idatm_type O3 atom id /A:132@CG2 idatm_type C3 atom id /A:133@N idatm_type Npl atom id /A:133@CA idatm_type C3 atom id /A:133@C idatm_type C2 atom id /A:133@O idatm_type O2 atom id /A:133@CB idatm_type C3 atom id /A:133@CG1 idatm_type C3 atom id /A:133@CG2 idatm_type C3 atom id /A:136@N idatm_type Npl atom id /A:136@CA idatm_type C3 atom id /A:136@C idatm_type C2 atom id /A:136@O idatm_type O2 atom id /A:136@CB idatm_type C3 atom id /A:136@CG idatm_type C3 atom id /A:136@CD idatm_type Cac atom id /A:136@OE1 idatm_type O2- atom id /A:136@OE2 idatm_type O2- atom id /A:137@N idatm_type Npl atom id /A:137@CA idatm_type C3 atom id /A:137@C idatm_type C2 atom id /A:137@O idatm_type O2 atom id /A:137@CB idatm_type C3 atom id /A:137@CG idatm_type C3 atom id /A:137@CD1 idatm_type C3 atom id /A:137@CD2 idatm_type C3 atom id /A:138@N idatm_type Npl atom id /A:138@CA idatm_type C3 atom id /A:138@C idatm_type C2 atom id /A:138@O idatm_type O2 atom id /A:138@CB idatm_type C3 atom id /A:138@CG idatm_type Car atom id /A:138@CD1 idatm_type Car atom id /A:138@CD2 idatm_type Car atom id /A:138@CE1 idatm_type Car atom id /A:138@CE2 idatm_type Car atom id /A:138@CZ idatm_type Car atom id /A:139@N idatm_type Npl atom id /A:139@CA idatm_type C3 atom id /A:139@C idatm_type C2 atom id /A:139@O idatm_type O2 atom id /A:139@CB idatm_type C3 atom id /A:139@CG idatm_type C3 atom id /A:139@CD idatm_type C3 atom id /A:139@NE idatm_type Ng+ atom id /A:139@CZ idatm_type C2 atom id /A:139@NH1 idatm_type Ng+ atom id /A:139@NH2 idatm_type Ng+ atom id /A:140@N idatm_type Npl atom id /A:140@CA idatm_type C3 atom id /A:140@C idatm_type C2 atom id /A:140@O idatm_type O2 atom id /A:140@CB idatm_type C3 atom id /A:140@CG idatm_type Cac atom id /A:140@OD1 idatm_type O2- atom id /A:140@OD2 idatm_type O2- atom id /A:143@N idatm_type Npl atom id /A:143@CA idatm_type C3 atom id /A:143@C idatm_type C2 atom id /A:143@O idatm_type O2 atom id /A:143@CB idatm_type C3 atom id /A:143@CG idatm_type C2 atom id /A:143@OD1 idatm_type O2 atom id /A:143@ND2 idatm_type Npl atom id /A:144@N idatm_type Npl atom id /A:144@CA idatm_type C3 atom id /A:144@C idatm_type C2 atom id /A:144@O idatm_type O2 atom id /A:144@CB idatm_type C3 atom id /A:144@CG idatm_type Car atom id /A:144@CD1 idatm_type Car atom id /A:144@CD2 idatm_type Car atom id /A:144@NE1 idatm_type Npl atom id /A:144@CE2 idatm_type Car atom id /A:144@CE3 idatm_type Car atom id /A:144@CZ2 idatm_type Car atom id /A:144@CZ3 idatm_type Car atom id /A:144@CH2 idatm_type Car atom id /A:145@N idatm_type Npl atom id /A:145@CA idatm_type C3 atom id /A:145@C idatm_type C2 atom id /A:145@O idatm_type O2 atom id /A:146@N idatm_type Npl atom id /A:146@CA idatm_type C3 atom id /A:146@C idatm_type C2 atom id /A:146@O idatm_type O2 atom id /A:146@CB idatm_type C3 atom id /A:146@CG idatm_type C3 atom id /A:146@CD idatm_type C3 atom id /A:146@NE idatm_type Ng+ atom id /A:146@CZ idatm_type C2 atom id /A:146@NH1 idatm_type Ng+ atom id /A:146@NH2 idatm_type Ng+ atom id /A:149@N idatm_type Npl atom id /A:149@CA idatm_type C3 atom id /A:149@C idatm_type C2 atom id /A:149@O idatm_type O2 atom id /A:149@CB idatm_type C3 atom id /A:153@N idatm_type Npl atom id /A:153@CA idatm_type C3 atom id /A:153@C idatm_type C2 atom id /A:153@O idatm_type O2 atom id /A:153@CB idatm_type C3 atom id /A:153@CG idatm_type Car atom id /A:153@CD1 idatm_type Car atom id /A:153@CD2 idatm_type Car atom id /A:153@CE1 idatm_type Car atom id /A:153@CE2 idatm_type Car atom id /A:153@CZ idatm_type Car atom id /A:188@N idatm_type Npl atom id /A:188@CA idatm_type C3 atom id /A:188@C idatm_type C2 atom id /A:188@O idatm_type O2 atom id /A:188@CB idatm_type C3 atom id /A:188@CG idatm_type Car atom id /A:188@CD1 idatm_type Car atom id /A:188@CD2 idatm_type Car atom id /A:188@NE1 idatm_type Npl atom id /A:188@CE2 idatm_type Car atom id /A:188@CE3 idatm_type Car atom id /A:188@CZ2 idatm_type Car atom id /A:188@CZ3 idatm_type Car atom id /A:188@CH2 idatm_type Car atom id /A:200@N idatm_type Npl atom id /A:200@CA idatm_type C3 atom id /A:200@C idatm_type C2 atom id /A:200@O idatm_type O2 atom id /A:200@CB idatm_type C3 atom id /A:200@CG idatm_type C3 atom id /A:200@CD idatm_type Cac atom id /A:200@OE1 idatm_type O2- atom id /A:200@OE2 idatm_type O2- atom id /A:201@N idatm_type Npl atom id /A:201@CA idatm_type C3 atom id /A:201@C idatm_type C2 atom id /A:201@O idatm_type O2 atom id /A:201@CB idatm_type C3 atom id /A:201@CG idatm_type C3 atom id /A:201@CD1 idatm_type C3 atom id /A:201@CD2 idatm_type C3 atom id /A:202@N idatm_type Npl atom id /A:202@CA idatm_type C3 atom id /A:202@C idatm_type C2 atom id /A:202@O idatm_type O2 atom id /A:202@CB idatm_type C3 atom id /A:202@CG idatm_type Car atom id /A:202@CD1 idatm_type Car atom id /A:202@CD2 idatm_type Car atom id /A:202@CE1 idatm_type Car atom id /A:202@CE2 idatm_type Car atom id /A:202@CZ idatm_type Car atom id /A:202@OH idatm_type O3 atom id /A:204@N idatm_type Npl atom id /A:204@CA idatm_type C3 atom id /A:204@C idatm_type C2 atom id /A:204@O idatm_type O2 atom id /A:204@CB idatm_type C3 atom id /A:204@CG idatm_type C3 atom id /A:204@CD idatm_type C3 atom id /A:206@N idatm_type Npl atom id /A:206@CA idatm_type C3 atom id /A:206@C idatm_type C2 atom id /A:206@O idatm_type O2 atom id /A:206@CB idatm_type C3 atom id /A:316@O idatm_type O3 atom id /A:325@O idatm_type O3 atom id /A:340@O idatm_type O3 atom id /A:347@O idatm_type O3 atom id /A:359@O idatm_type O3 atom id /A:368@O idatm_type O3 atom id /A:376@O idatm_type O3 atom id /A:387@O idatm_type O3 atom id /A:396@O idatm_type O3 atom id /A:398@O idatm_type O3 > show sel atoms > color sel cornflower blue > select add #1 1476 atoms, 1404 bonds, 1 pseudobond, 276 residues, 3 models selected > select subtract #1 Nothing selected > delete solvent > selete ~protein Unknown command: selete ~protein > delete ~protein > select /A 1227 atoms, 1260 bonds, 1 pseudobond, 151 residues, 2 models selected > select zone sel 5 residues true Selected 117 atoms, 1 surfaces > select sel & /E 117 atoms, 114 bonds, 15 residues, 1 model selected > info selection atom id /E:109@N idatm_type N3+ atom id /E:109@CA idatm_type C3 atom id /E:109@C idatm_type C2 atom id /E:109@O idatm_type O2 atom id /E:109@CB idatm_type C3 atom id /E:109@CG idatm_type C3 atom id /E:109@SD idatm_type S3 atom id /E:109@CE idatm_type C3 atom id /E:112@N idatm_type Npl atom id /E:112@CA idatm_type C3 atom id /E:112@C idatm_type C2 atom id /E:112@O idatm_type O2 atom id /E:112@CB idatm_type C3 atom id /E:112@CG idatm_type C3 atom id /E:112@CD1 idatm_type C3 atom id /E:112@CD2 idatm_type C3 atom id /E:113@N idatm_type Npl atom id /E:113@CA idatm_type C3 atom id /E:113@C idatm_type C2 atom id /E:113@O idatm_type O2 atom id /E:113@CB idatm_type C3 atom id /E:113@OG idatm_type O3 atom id /E:115@N idatm_type Npl atom id /E:115@CA idatm_type C3 atom id /E:115@C idatm_type C2 atom id /E:115@O idatm_type O2 atom id /E:115@CB idatm_type C3 atom id /E:115@CG idatm_type C3 atom id /E:115@CD idatm_type C3 atom id /E:115@NE idatm_type Ng+ atom id /E:115@CZ idatm_type C2 atom id /E:115@NH1 idatm_type Ng+ atom id /E:115@NH2 idatm_type Ng+ atom id /E:116@N idatm_type Npl atom id /E:116@CA idatm_type C3 atom id /E:116@C idatm_type C2 atom id /E:116@O idatm_type O2 atom id /E:116@CB idatm_type C3 atom id /E:116@CG idatm_type C3 atom id /E:116@CD1 idatm_type C3 atom id /E:116@CD2 idatm_type C3 atom id /E:117@N idatm_type Npl atom id /E:117@CA idatm_type C3 atom id /E:117@C idatm_type C2 atom id /E:117@O idatm_type O2 atom id /E:117@CB idatm_type C3 atom id /E:117@CG idatm_type C3 atom id /E:117@CD idatm_type C3 atom id /E:117@CE idatm_type C3 atom id /E:117@NZ idatm_type N3+ atom id /E:118@N idatm_type Npl atom id /E:118@CA idatm_type C3 atom id /E:118@C idatm_type C2 atom id /E:118@O idatm_type O2 atom id /E:118@CB idatm_type C3 atom id /E:118@CG1 idatm_type C3 atom id /E:118@CG2 idatm_type C3 atom id /E:119@N idatm_type Npl atom id /E:119@CA idatm_type C3 atom id /E:119@C idatm_type C2 atom id /E:119@O idatm_type O2 atom id /E:119@CB idatm_type C3 atom id /E:119@OG1 idatm_type O3 atom id /E:119@CG2 idatm_type C3 atom id /E:120@N idatm_type Npl atom id /E:120@CA idatm_type C3 atom id /E:120@C idatm_type C2 atom id /E:120@O idatm_type O2 atom id /E:121@N idatm_type Npl atom id /E:121@CA idatm_type C3 atom id /E:121@C idatm_type C2 atom id /E:121@O idatm_type O2 atom id /E:121@CB idatm_type C3 atom id /E:121@CG idatm_type Cac atom id /E:121@OD1 idatm_type O2- atom id /E:121@OD2 idatm_type O2- atom id /E:122@N idatm_type Npl atom id /E:122@CA idatm_type C3 atom id /E:122@C idatm_type C2 atom id /E:122@O idatm_type O2 atom id /E:122@CB idatm_type C3 atom id /E:122@CG idatm_type C3 atom id /E:122@CD1 idatm_type C3 atom id /E:122@CD2 idatm_type C3 atom id /E:123@N idatm_type Npl atom id /E:123@CA idatm_type C3 atom id /E:123@C idatm_type C2 atom id /E:123@O idatm_type O2 atom id /E:123@CB idatm_type C3 atom id /E:123@CG idatm_type Car atom id /E:123@CD1 idatm_type Car atom id /E:123@CD2 idatm_type Car atom id /E:123@CE1 idatm_type Car atom id /E:123@CE2 idatm_type Car atom id /E:123@CZ idatm_type Car atom id /E:124@N idatm_type Npl atom id /E:124@CA idatm_type C3 atom id /E:124@C idatm_type C2 atom id /E:124@O idatm_type O2 atom id /E:124@CB idatm_type C3 atom id /E:124@CG idatm_type Cac atom id /E:124@OD1 idatm_type O2- atom id /E:124@OD2 idatm_type O2- atom id /E:126@N idatm_type Npl atom id /E:126@CA idatm_type C3 atom id /E:126@C idatm_type C2 atom id /E:126@O idatm_type O2 atom id /E:126@CB idatm_type C3 atom id /E:126@CG idatm_type C3 atom id /E:126@SD idatm_type S3 atom id /E:126@CE idatm_type C3 atom id /E:127@N idatm_type Npl atom id /E:127@CA idatm_type C3 atom id /E:127@C idatm_type C2 atom id /E:127@O idatm_type O2 atom id /E:127@CB idatm_type C3 atom id /E:127@OG idatm_type O3 > show sel atoms > color sel yellow > select add #1 1371 atoms, 1404 bonds, 1 pseudobond, 171 residues, 3 models selected > select subtract #1 Nothing selected Desktop color scheme is light ===== Log before crash end ===== Log: UCSF ChimeraX version: 1.11.1 (2026-01-23) © 2016-2025 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open > /Users/franciscomachancoseshernandez/Desktop/TFM/Proteínas/BCL2/5VAU_ref_AE_clean.pdb 5VAU_ref_AE_clean.pdb title: BCL-2 complex with beclin 1 BH3 domain [more info...] Chain information for 5VAU_ref_AE_clean.pdb #1 --- Chain | Description | UniProt A | apoptosis regulator BCL-2 -- BCL-2-like protein 1 chimera | BCL2_HUMAN 1-75 92-207 E | beclin-1 | BECN1_HUMAN 105-130 140 atoms have alternate locations. Control/examine alternate locations with Altloc Explorer [start tool...] or the altlocs command. 1476 atoms have anisotropic B-factors. Depict anisotropic information with Thermal Ellipsoids [start tool...] or the aniso command. OpenGL version: 4.1 Metal - 90.5 OpenGL renderer: Apple M1 OpenGL vendor: Apple Python: 3.11.9 Locale: en_US.UTF-8 Qt version: PyQt6 6.9.1, Qt 6.9.0 Qt runtime version: 6.9.2 Qt platform: cocoa Hardware: Hardware Overview: Model Name: MacBook Pro Model Identifier: MacBookPro17,1 Model Number: MYDC2Y/A Chip: Apple M1 Total Number of Cores: 8 (4 Performance and 4 Efficiency) Memory: 8 GB System Firmware Version: 13822.81.10 OS Loader Version: 13822.81.10 Software: System Software Overview: System Version: macOS 26.3.1 (25D2128) Kernel Version: Darwin 25.3.0 Time since boot: 15 días, 1 hora y 7 minutos Graphics/Displays: Apple M1: Chipset Model: Apple M1 Type: GPU Bus: Built-In Total Number of Cores: 8 Vendor: Apple (0x106b) Metal Support: Metal 4 Displays: Color LCD: Display Type: Built-In Retina LCD Resolution: 2560 x 1600 Retina Main Display: Yes Mirror: Off Online: Yes Automatically Adjust Brightness: No Connection Type: Internal Installed Packages: aiohappyeyeballs: 2.6.1 aiohttp: 3.13.1 aiosignal: 1.4.0 alabaster: 1.0.0 annotated-types: 0.7.0 anyio: 4.12.1 appdirs: 1.4.4 appnope: 0.1.4 asttokens: 3.0.1 attrs: 25.4.0 babel: 2.17.0 beautifulsoup4: 4.13.5 blockdiag: 3.0.0 blosc2: 3.12.2 build: 1.3.0 certifi: 2025.7.14 cftime: 1.6.5 charset-normalizer: 3.4.4 ChimeraX-AddCharge: 1.5.20 ChimeraX-AddH: 2.2.8 ChimeraX-AlignmentAlgorithms: 2.0.2 ChimeraX-AlignmentHdrs: 3.6.1 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 3.1.1 ChimeraX-AlphaFold: 1.0.1 ChimeraX-AltlocExplorer: 1.2 ChimeraX-AmberInfo: 1.0 ChimeraX-Animations: 1.0 ChimeraX-Aniso: 1.3.2 ChimeraX-Arrays: 1.1 ChimeraX-Atomic: 1.61.4 ChimeraX-AtomicLibrary: 14.2.1 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.4 ChimeraX-BasicActions: 1.1.3 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 3.0.0 ChimeraX-Boltz: 1.1 ChimeraX-BondRot: 2.0.4 ChimeraX-BugReporter: 1.0.2 ChimeraX-BuildStructure: 2.13.1 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.6.0 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.4 ChimeraX-ChangeChains: 1.1 ChimeraX-CheckWaters: 1.5 ChimeraX-ChemGroup: 2.0.2 ChimeraX-Clashes: 2.3 ChimeraX-ColorActions: 1.0.5 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.8 ChimeraX-CommandLine: 1.3.0 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.11.1 ChimeraX-CoreFormats: 1.2 ChimeraX-coulombic: 1.4.5 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.2.4 ChimeraX-Dicom: 1.2.7 ChimeraX-DistMonitor: 1.4.2 ChimeraX-DockPrep: 1.1.4 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ESMFold: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.3 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.4.1 ChimeraX-Hbonds: 2.5.3 ChimeraX-Help: 1.3 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.4 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-IUPAC: 1.0 ChimeraX-KVFinder: 1.7.3 ChimeraX-Label: 1.2 ChimeraX-ListInfo: 1.2.2 ChimeraX-Log: 1.2.2 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.9.2 ChimeraX-Map: 1.3 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0.1 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.2 ChimeraX-MatchMaker: 2.2.2 ChimeraX-MCopy: 1.0 ChimeraX-MCPServer: 0.1.0 ChimeraX-MDcrds: 2.17.2 ChimeraX-MedicalToolbar: 1.1 ChimeraX-Meeting: 1.0.1 ChimeraX-Minimize: 1.3.2 ChimeraX-MLP: 1.1.1 ChimeraX-mmCIF: 2.16 ChimeraX-MMTF: 2.2 ChimeraX-ModelArchive: 1.0 ChimeraX-Modeller: 1.5.22 ChimeraX-ModelPanel: 1.6 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0.3 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0.1 ChimeraX-MutationScores: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nifti: 1.2 ChimeraX-NMRSTAR: 1.0.2 ChimeraX-NRRD: 1.2 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.15.2 ChimeraX-OrthoPick: 1.0.1 ChimeraX-PDB: 2.7.12 ChimeraX-PDBBio: 1.0.1 ChimeraX-PDBLibrary: 1.0.5 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1.4 ChimeraX-ProfileGrids: 1.4.2 ChimeraX-PubChem: 2.2 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.2 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.6.5 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.3.3 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 4.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.2 ChimeraX-Scenes: 0.3.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.3 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-Segmentations: 3.5.10 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.17.3 ChimeraX-Shape: 1.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.2.1 ChimeraX-ShowSequences: 1.0.3 ChimeraX-SideView: 1.0.1 ChimeraX-SimilarStructures: 1.0.1 ChimeraX-Smiles: 2.1.2 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.19.1 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.2.1 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.5.2 ChimeraX-TapeMeasure: 1.0 ChimeraX-TaskManager: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.2.3 ChimeraX-ToolshedUtils: 1.2.4 ChimeraX-Topography: 1.0 ChimeraX-ToQuest: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.49.1 ChimeraX-Umap: 1.0 ChimeraX-uniprot: 2.3.2 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDock: 1.5.2 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-vrml: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.5 ChimeraX-Zone: 1.0.1 click: 8.3.1 colorama: 0.4.6 comm: 0.2.3 contourpy: 1.3.3 coverage: 7.13.1 cxservices: 1.2.3 cycler: 0.12.1 Cython: 3.1.4 debugpy: 1.8.19 decorator: 5.2.1 docutils: 0.21.2 executing: 2.2.1 filelock: 3.19.1 fonttools: 4.61.1 frozenlist: 1.8.0 funcparserlib: 2.0.0a0 glfw: 2.10.0 grako: 3.16.5 h11: 0.16.0 h5py: 3.15.1 html2text: 2025.4.15 httpcore: 1.0.9 httpx: 0.28.1 httpx-sse: 0.4.3 idna: 3.11 ihm: 2.2 imagecodecs: 2024.6.1 imagesize: 1.4.1 iniconfig: 2.3.0 ipykernel: 6.30.1 ipython: 9.5.0 ipython_pygments_lexers: 1.1.1 ipywidgets: 8.1.8 jedi: 0.19.2 Jinja2: 3.1.6 jsonschema: 4.26.0 jsonschema-specifications: 2025.9.1 jupyter_client: 8.6.3 jupyter_core: 5.9.1 jupyterlab_widgets: 3.0.16 kiwisolver: 1.4.9 line_profiler: 5.0.0 lxml: 6.0.2 lz4: 4.3.2 Markdown: 3.8.2 MarkupSafe: 3.0.3 matplotlib: 3.10.7 matplotlib-inline: 0.2.1 mcp: 1.18.0 msgpack: 1.1.1 multidict: 6.7.0 ndindex: 1.10.1 nest-asyncio: 1.6.0 netCDF4: 1.6.5 networkx: 3.3 nibabel: 5.2.0 nptyping: 2.5.0 numexpr: 2.14.1 numpy: 1.26.4 OpenMM: 8.2.0 openvr: 1.26.701 packaging: 25.0 ParmEd: 4.2.2 parso: 0.8.5 pep517: 0.13.1 pexpect: 4.9.0 pickleshare: 0.7.5 pillow: 11.3.0 pip: 25.2 pkginfo: 1.12.1.2 platformdirs: 4.5.1 pluggy: 1.6.0 prompt_toolkit: 3.0.52 propcache: 0.4.1 psutil: 7.0.0 ptyprocess: 0.7.0 pure_eval: 0.2.3 py-cpuinfo: 9.0.0 pybind11: 3.0.1 pycollada: 0.8 pydantic: 2.12.5 pydantic-settings: 2.12.0 pydantic_core: 2.41.5 pydicom: 2.4.4 Pygments: 2.18.0 pynmrstar: 3.3.6 pynrrd: 1.0.0 PyOpenGL: 3.1.10 PyOpenGL-accelerate: 3.1.10 pyopenxr: 1.1.4501 pyparsing: 3.3.2 pyproject_hooks: 1.2.0 PyQt6-commercial: 6.9.1 PyQt6-Qt6: 6.9.2 PyQt6-WebEngine-commercial: 6.9.0 PyQt6-WebEngine-Qt6: 6.9.2 PyQt6_sip: 13.10.2 pytest: 9.0.2 pytest-cov: 7.0.0 python-dateutil: 2.9.0.post0 python-dotenv: 1.2.1 python-multipart: 0.0.21 pyzmq: 27.1.0 qtconsole: 5.7.0 QtPy: 2.4.3 qtshim: 1.2 RandomWords: 0.4.0 referencing: 0.37.0 requests: 2.32.5 roman-numerals: 4.1.0 roman-numerals-py: 4.1.0 rpds-py: 0.30.0 scipy: 1.14.0 setuptools: 80.9.0 sfftk-rw: 0.8.1 six: 1.17.0 snowballstemmer: 3.0.1 sortedcontainers: 2.4.0 soupsieve: 2.8.3 Sphinx: 8.2.3 sphinx-autodoc-typehints: 3.2.0 sphinxcontrib-applehelp: 2.0.0 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 2.0.0 sphinxcontrib-htmlhelp: 2.1.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 2.0.0 sphinxcontrib-serializinghtml: 2.0.0 sse-starlette: 3.2.0 stack-data: 0.6.3 starlette: 0.52.1 superqt: 0.7.6 tables: 3.10.2 tcia_utils: 1.5.1 tifffile: 2025.3.13 tinyarray: 1.2.5 tornado: 6.5.4 traitlets: 5.14.3 typing-inspection: 0.4.2 typing_extensions: 4.15.0 urllib3: 2.6.3 uvicorn: 0.40.0 wcwidth: 0.3.2 webcolors: 24.11.1 wheel: 0.45.1 wheel-filename: 1.4.2 widgetsnbextension: 4.0.15 yarl: 1.22.0 }}} " defect closed normal Window Toolkit duplicate all ChimeraX