Changes between Initial Version and Version 1 of Ticket #20314


Ignore:
Timestamp:
May 13, 2026, 9:25:02 AM (4 weeks ago)
Author:
Eric Pettersen
Comment:

Legend:

Unmodified
Added
Removed
Modified

  • Ticket #20314

    • Property Cc Elaine Meng added
    • Property Component Unassigned → Depiction
    • Property Owner set to Tom Goddard
    • Property Platform → all
    • Property Project → ChimeraX
    • Property Status new → assigned
    • Property Summary ChimeraX bug report submission → "cartoon suppress true" displays cartoon

  • Ticket #20314 – Description

    initial v1  
    15251525 
    15261526
    1527 > open /Users/dalar193/wd/deltaRibosomes/aligned_maps/EMD15793_8b0x.mrc id 1.3
    1528 > name 8b0x_map
    1529 
    1530 Opened 8b0x_map as #2, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1531 at level 0.608, step 2, values float32 
    1532 
    1533 > open /Users/dalar193/wd/deltaRibosomes/aligned_maps/8b0x_LSQ-23S.cif id 1.5
    1534 > name 8b0x
    1535 
    1536 Summary of feedback from opening
    1537 /Users/dalar193/wd/deltaRibosomes/aligned_maps/8b0x_LSQ-23S.cif 
    1538 --- 
    1539 warnings | Skipping chem_comp category: Missing column 'type' near line 4126 
    1540 Unknown polymer entity '5' near line 4378 
    1541 Unknown polymer entity '6' near line 39620 
    1542 Unknown polymer entity '7' near line 41380 
    1543 Unknown polymer entity '8' near line 43020 
    1544 Unknown polymer entity '9' near line 44677 
    1545 48 messages similar to the above omitted 
    1546 Missing or incomplete sequence information. Inferred polymer connectivity. 
    1547  
    1548  
    1549 Chain information for 8b0x #2 
    1550 --- 
    1551 Chain | Description 
    1552 0 | No description available 
    1553 1 | No description available 
    1554 2 | No description available 
    1555 3 | No description available 
    1556 A | No description available 
    1557 B | No description available 
    1558 C | No description available 
    1559 D | No description available 
    1560 E | No description available 
    1561 F | No description available 
    1562 G | No description available 
    1563 H | No description available 
    1564 I | No description available 
    1565 J | No description available 
    1566 K | No description available 
    1567 L | No description available 
    1568 M | No description available 
    1569 N | No description available 
    1570 O | No description available 
    1571 P | No description available 
    1572 Q | No description available 
    1573 R | No description available 
    1574 S | No description available 
    1575 T | No description available 
    1576 U | No description available 
    1577 X | No description available 
    1578 Z | No description available 
    1579 a | No description available 
    1580 b | No description available 
    1581 c | No description available 
    1582 d | No description available 
    1583 e | No description available 
    1584 f | No description available 
    1585 g | No description available 
    1586 h | No description available 
    1587 i | No description available 
    1588 j | No description available 
    1589 k | No description available 
    1590 l | No description available 
    1591 m | No description available 
    1592 n | No description available 
    1593 o | No description available 
    1594 p | No description available 
    1595 q | No description available 
    1596 r | No description available 
    1597 s | No description available 
    1598 t | No description available 
    1599 u | No description available 
    1600 v | No description available 
    1601 w | No description available 
    1602 x | No description available 
    1603 y | No description available 
    1604 z | No description available 
    1605  
    1606 
    1607 > open
    1608 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/EMD16646_8cgk_x1.0067.mrc id
    1609 > 1.6 name 8cgk_map
    1610 
    1611 Opened 8cgk_map as #2, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1612 at level 0.0122, step 2, values float32 
    1613 
    1614 > open /Users/dalar193/wd/deltaRibosomes/aligned_maps/8cgk_x1.0067_LSQ-23S.pdb
    1615 > id 1.7 name 8cgk
    1616 
    1617 Summary of feedback from opening
    1618 /Users/dalar193/wd/deltaRibosomes/aligned_maps/8cgk_x1.0067_LSQ-23S.pdb 
    1619 --- 
    1620 warnings | Start residue of secondary structure not found: SHEET 1 AA1 4 PHE A 20 LYS A 25 0 
    1621 Start residue of secondary structure not found: SHEET 2 AA1 4 GLU A 7 SER A 13
    1622 -1 
    1623 Start residue of secondary structure not found: SHEET 3 AA1 4 GLN A 45 LYS A
    1624 53 -1 
    1625 Start residue of secondary structure not found: SHEET 4 AA1 4 GLU A 35 ASP A
    1626 40 -1 
    1627 Start residue of secondary structure not found: SHEET 1 AA2 3 LYS C 15 LYS C
    1628 16 0 
    1629 151 messages similar to the above omitted 
    1630  
    1631 Chain information for 8cgk #2 
    1632 --- 
    1633 Chain | Description 
    1634 0 | No description available 
    1635 1 | No description available 
    1636 2 | No description available 
    1637 3 | No description available 
    1638 a | No description available 
    1639 b | No description available 
    1640 c | No description available 
    1641 d | No description available 
    1642 e | No description available 
    1643 g | No description available 
    1644 h | No description available 
    1645 i | No description available 
    1646 j | No description available 
    1647 k | No description available 
    1648 l | No description available 
    1649 m | No description available 
    1650 o | No description available 
    1651 p | No description available 
    1652 q | No description available 
    1653 r | No description available 
    1654 s | No description available 
    1655 t | No description available 
    1656 u | No description available 
    1657 v | No description available 
    1658 w | No description available 
    1659 x | No description available 
    1660 y | No description available 
    1661 z | No description available 
    1662  
    1663 
    1664 > open
    1665 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/EMD30215_7bv8_x1.00083.mrc id
    1666 > 1.8 name 7bv8_map
    1667 
    1668 Opened 7bv8_map as #2, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1669 at level 0.189, step 2, values float32 
    1670 
    1671 > open
    1672 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/7bv8_x1.00083_LSQ-23S.pdb id
    1673 > 1.9 name 7bv8
    1674 
    1675 Summary of feedback from opening
    1676 /Users/dalar193/wd/deltaRibosomes/aligned_maps/7bv8_x1.00083_LSQ-23S.pdb 
    1677 --- 
    1678 warnings | Start residue of secondary structure not found: SHEET 1 AE6 3 THR A 35 GLU A 39 0 
    1679 Start residue of secondary structure not found: SHEET 2 AE6 3 THR A 4 GLN A 9
    1680 -1 
    1681 Start residue of secondary structure not found: SHEET 3 AE6 3 VAL A 55 GLU A
    1682 58 -1 
    1683 Start residue of secondary structure not found: SHEET 1 AE7 2 LEU B 28 VAL B
    1684 30 0 
    1685 Start residue of secondary structure not found: SHEET 2 AE7 2 LYS B 37 LEU B
    1686 39 -1 
    1687 3 messages similar to the above omitted 
    1688 End residue of secondary structure not found: SHEET 4 AE8 4 GLU C 35 PHE C 39
    1689 -1 
    1690 Start residue of secondary structure not found: SHEET 1 AE9 3 LYS E 15 LYS E
    1691 16 0 
    1692 Start residue of secondary structure not found: SHEET 2 AE9 3 PHE E 22 HIS E
    1693 24 -1 
    1694 Start residue of secondary structure not found: SHEET 3 AE9 3 ALA E 48 MET E
    1695 49 -1 
    1696 Start residue of secondary structure not found: SHEET 1 AF1 4 LYS F 2 VAL F 3
    1697 0 
    1698 Start residue of secondary structure not found: SHEET 2 AF1 4 GLN F 35 ARG F
    1699 36 1 
    1700 2 messages similar to the above omitted 
    1701  
    1702 Chain information for 7bv8 #2 
    1703 --- 
    1704 Chain | Description 
    1705 A | No description available 
    1706 B | No description available 
    1707 C | No description available 
    1708 D | No description available 
    1709 E | No description available 
    1710 F | No description available 
    1711 G | No description available 
    1712 H | No description available 
    1713 I | No description available 
    1714 J | No description available 
    1715 K | No description available 
    1716 L | No description available 
    1717 M | No description available 
    1718 N | No description available 
    1719 O | No description available 
    1720 P | No description available 
    1721 Q | No description available 
    1722 R | No description available 
    1723 S | No description available 
    1724 T | No description available 
    1725 U | No description available 
    1726 V | No description available 
    1727 W | No description available 
    1728 X | No description available 
    1729 Y | No description available 
    1730 Z | No description available 
    1731 a | No description available 
    1732 b | No description available 
    1733 c | No description available 
    1734 d | No description available 
    1735 e | No description available 
    1736 f | No description available 
    1737  
    1738 
    1739 > open
    1740 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/EMD12694_7o1a_x0.9952.mrc id
    1741 > 1.10 name 7o1a_map
    1742 
    1743 Opened 7o1a_map as #2, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1744 at level 0.0279, step 2, values float32 
    1745 
    1746 > open /Users/dalar193/wd/deltaRibosomes/aligned_maps/7o1a_x0.9952_LSQ-23S.pdb
    1747 > id 1.11 name 7o1a
    1748 
    1749 Summary of feedback from opening
    1750 /Users/dalar193/wd/deltaRibosomes/aligned_maps/7o1a_x0.9952_LSQ-23S.pdb 
    1751 --- 
    1752 warnings | Start residue of secondary structure not found: SHEET 1 AA1 1 0 0 0 
    1753 PDB SEQRES record for chain A is incomplete. Ignoring input sequence records
    1754 as basis for sequence. 
    1755  
    1756 Chain information for 7o1a #2 
    1757 --- 
    1758 Chain | Description 
    1759 A | No description available 
    1760 AA | No description available 
    1761 AB | No description available 
    1762 AL | No description available 
    1763 AU | No description available 
    1764 B | No description available 
    1765 B0 | No description available 
    1766 B1 | No description available 
    1767 B2 | No description available 
    1768 B3 | No description available 
    1769 B4 | No description available 
    1770 B5 | No description available 
    1771 B7 | No description available 
    1772 B8 | No description available 
    1773 BA | No description available 
    1774 BD | No description available 
    1775 BM | No description available 
    1776 BU | No description available 
    1777 BV | No description available 
    1778 BW | No description available 
    1779 BX | No description available 
    1780 BY | No description available 
    1781 BZ | No description available 
    1782  
    1783 
    1784 > rename #1 references
    1785 
    1786 > open
    1787 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_refine3d_job207_classAPE_0.70469Apix.mrc
    1788 > id 2.1 name d9_ape
    1789 
    1790 Opened d9_ape as #2, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    1791 level 0.0289, step 2, values float32 
    1792 
    1793 > open
    1794 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_refine3d_job191_APe1_0.70469Apix.mrc
    1795 > id 2.2 name d9_ape1
    1796 
    1797 Opened d9_ape1 as #3, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    1798 level 0.0292, step 2, values float32 
    1799 
    1800 > open
    1801 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_refine3d_job192_ape2_0.70469Apix.mrc
    1802 > id 2.3 name d9_ape2
    1803 
    1804 Opened d9_ape2 as #3, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    1805 level 0.0262, step 2, values float32 
    1806 
    1807 > open
    1808 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_refine3d_job193_APe3_0.70469Apix.mrc
    1809 > id 2.4 name d9_ape3
    1810 
    1811 Opened d9_ape3 as #3, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    1812 level 0.028, step 2, values float32 
    1813 
    1814 > open
    1815 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_refine3d_job188_PE_0.70469Apix.mrc
    1816 > id 2.5 name d9_pe
    1817 
    1818 Opened d9_pe as #3, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    1819 level 0.0288, step 2, values float32 
    1820 
    1821 > open
    1822 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_refine3d_job190_e_0.70469Apix.mrc
    1823 > id 2.6 name d9_e
    1824 
    1825 Opened d9_e as #3, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    1826 level 0.0246, step 2, values float32 
    1827 
    1828 > rename #2 d9
    1829 
    1830 > open
    1831 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_localres_job216_classAPE_0.70469Apix.mrc
    1832 > id 3.1 name d9_ape
    1833 
    1834 Opened d9_ape as #3, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    1835 level 0.0963, step 2, values float32 
    1836 
    1837 > open
    1838 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_localres_job211_classAPE1_0.70469Apix.mrc
    1839 > id 3.2 name d9_ape1
    1840 
    1841 Opened d9_ape1 as #4, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    1842 level 0.0936, step 2, values float32 
    1843 
    1844 > open
    1845 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_localres_job212_classAPE2_0.70469Apix.mrc
    1846 > id 3.3 name d9_ape2
    1847 
    1848 Opened d9_ape2 as #4, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    1849 level 0.0768, step 2, values float32 
    1850 
    1851 > open
    1852 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_localres_job213_classAPE3_0.70469Apix.mrc
    1853 > id 3.4 name d9_ape3
    1854 
    1855 Opened d9_ape3 as #4, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    1856 level 0.0872, step 2, values float32 
    1857 
    1858 > open
    1859 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_localres_job208_classPE_0.70469Apix.mrc
    1860 > id 3.5 name d9_pe
    1861 
    1862 Opened d9_pe as #4, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    1863 level 0.0944, step 2, values float32 
    1864 
    1865 > open
    1866 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_localres_job210_classE_0.70469Apix.mrc
    1867 > id 3.6 name d9_e
    1868 
    1869 Opened d9_e as #4, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    1870 level 0.0736, step 2, values float32 
    1871 
    1872 > rename #3 d9-sharp
    1873 
    1874 > open
    1875 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_NU_J83_PTCclass0_0.70469Apix.mrc
    1876 > id 4.10 name d9_J83_cl0
    1877 
    1878 Opened d9_J83_cl0 as #4, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1879 at level 0.884, step 2, values float32 
    1880 
    1881 > open
    1882 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_NU_J84_PTCclass1_0.70469Apix.mrc
    1883 > id 4.1 name d9_J84_cl1
    1884 
    1885 Opened d9_J84_cl1 as #5, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1886 at level 0.894, step 2, values float32 
    1887 
    1888 > open
    1889 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_NU_J85_PTCclass2_0.70469Apix.mrc
    1890 > id 4.2 name d9_J85_cl2
    1891 
    1892 Opened d9_J85_cl2 as #5, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1893 at level 0.885, step 2, values float32 
    1894 
    1895 > open
    1896 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_NU_J86_PTCclass3_0.70469Apix.mrc
    1897 > id 4.3 name d9_J86_cl3
    1898 
    1899 Opened d9_J86_cl3 as #5, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1900 at level 0.89, step 2, values float32 
    1901 
    1902 > open
    1903 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_NU_J87_PTCclass4_0.70469Apix.mrc
    1904 > id 4.4 name d9_J87_cl4
    1905 
    1906 Opened d9_J87_cl4 as #5, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1907 at level 0.888, step 2, values float32 
    1908 
    1909 > open
    1910 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_NU_J88_PTCclass5_0.70469Apix.mrc
    1911 > id 4.5 name d9_J88_cl5
    1912 
    1913 Opened d9_J88_cl5 as #5, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1914 at level 0.878, step 2, values float32 
    1915 
    1916 > open
    1917 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_NU_J89_PTCclass6_0.70469Apix.mrc
    1918 > id 4.6 name d9_J89_cl6
    1919 
    1920 Opened d9_J89_cl6 as #5, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1921 at level 0.887, step 2, values float32 
    1922 
    1923 > open
    1924 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_NU_J90_PTCclass7_0.70469Apix.mrc
    1925 > id 4.7 name d9_J90_cl7
    1926 
    1927 Opened d9_J90_cl7 as #5, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1928 at level 0.888, step 2, values float32 
    1929 
    1930 > open
    1931 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_NU_J91_PTCclass8_0.70469Apix.mrc
    1932 > id 4.8 name d9_J91_cl8
    1933 
    1934 Opened d9_J91_cl8 as #5, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1935 at level 0.919, step 2, values float32 
    1936 
    1937 > open
    1938 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_NU_J92_PTCclass9_0.70469Apix.mrc
    1939 > id 4.9 name d9_J92_cl9
    1940 
    1941 Opened d9_J92_cl9 as #5, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1942 at level 0.883, step 2, values float32 
    1943 
    1944 > rename #4 d9-PTC
    1945 
    1946 > open
    1947 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_LF_J127_PTCclass0_0.70469Apix.mrc
    1948 > id 5.10 name d9_J83_cl0
    1949 
    1950 Opened d9_J83_cl0 as #5, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1951 at level 1.33, step 2, values float32 
    1952 
    1953 > open
    1954 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_LF_J128_PTCclass1_0.70469Apix.mrc
    1955 > id 5.1 name d9_J84_cl1
    1956 
    1957 Opened d9_J84_cl1 as #6, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1958 at level 1.42, step 2, values float32 
    1959 
    1960 > open
    1961 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_LF_J129_PTCclass2_0.70469Apix.mrc
    1962 > id 5.2 name d9_J85_cl2
    1963 
    1964 Opened d9_J85_cl2 as #6, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1965 at level 1.38, step 2, values float32 
    1966 
    1967 > open
    1968 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_LF_J130_PTCclass3_0.70469Apix.mrc
    1969 > id 5.3 name d9_J86_cl3
    1970 
    1971 Opened d9_J86_cl3 as #6, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1972 at level 1.39, step 2, values float32 
    1973 
    1974 > open
    1975 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_LF_J131_PTCclass4_0.70469Apix.mrc
    1976 > id 5.4 name d9_J87_cl4
    1977 
    1978 Opened d9_J87_cl4 as #6, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1979 at level 1.38, step 2, values float32 
    1980 
    1981 > open
    1982 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_LF_J132_PTCclass5_0.70469Apix.mrc
    1983 > id 5.5 name d9_J88_cl5
    1984 
    1985 Opened d9_J88_cl5 as #6, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1986 at level 1.35, step 2, values float32 
    1987 
    1988 > open
    1989 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_LF_J133_PTCclass6_0.70469Apix.mrc
    1990 > id 5.6 name d9_J89_cl6
    1991 
    1992 Opened d9_J89_cl6 as #6, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    1993 at level 1.38, step 2, values float32 
    1994 
    1995 > open
    1996 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_LF_J134_PTCclass7_0.70469Apix.mrc
    1997 > id 5.7 name d9_J90_cl7
    1998 
    1999 Opened d9_J90_cl7 as #6, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2000 at level 1.39, step 2, values float32 
    2001 
    2002 > open
    2003 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_LF_J135_PTCclass8_0.70469Apix.mrc
    2004 > id 5.8 name d9_J91_cl8
    2005 
    2006 Opened d9_J91_cl8 as #6, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2007 at level 1.41, step 2, values float32 
    2008 
    2009 > open
    2010 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta9_LF_J136_PTCclass9_0.70469Apix.mrc
    2011 > id 5.9 name d9_J92_cl9
    2012 
    2013 Opened d9_J92_cl9 as #6, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2014 at level 1.37, step 2, values float32 
    2015 
    2016 > rename #5 d9-PTC-sharp
    2017 
    2018 > open
    2019 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J83-coot-6.pdb
    2020 > id 6.10 name d9_J83_cl0
    2021 
    2022 Summary of feedback from opening
    2023 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J83-coot-6.pdb 
    2024 --- 
    2025 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2026 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    2027 6 
    2028 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    2029 8 
    2030 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    2031 23 
    2032 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    2033 13 
    2034 320 messages similar to the above omitted 
    2035 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    2036 -1 N LEU l 102 O LEU l 33 
    2037 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    2038 0 
    2039 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    2040 -1 N LYS l 133 O SER l 30 
    2041 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    2042 0 
    2043 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    2044 115 -1 N ILE m 113 O ILE m 34 
    2045 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    2046 103 -1 N CYS m 100 O MET m 110 
    2047 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    2048 0 
    2049 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    2050 -1 N VAL n 39 O VAL n 49 
    2051 55 messages similar to the above omitted 
    2052 Cannot find LINK/SSBOND residue ZN (101 ) 
    2053 Cannot find LINK/SSBOND residue ZN (101 ) 
    2054 Cannot find LINK/SSBOND residue ZN (101 ) 
    2055 Cannot find LINK/SSBOND residue ZN (101 ) 
    2056  
    2057 Chain information for d9_J83_cl0 #6 
    2058 --- 
    2059 Chain | Description 
    2060 3 | No description available 
    2061 a | No description available 
    2062 b | No description available 
    2063 c | No description available 
    2064 e | No description available 
    2065 l | No description available 
    2066 v | No description available 
    2067  
    2068 
    2069 > open
    2070 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J84-coot-6.pdb
    2071 > id 6.1 name d9_J84_cl1
    2072 
    2073 Summary of feedback from opening
    2074 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J84-coot-6.pdb 
    2075 --- 
    2076 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2077 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    2078 6 
    2079 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    2080 8 
    2081 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    2082 23 
    2083 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    2084 13 
    2085 320 messages similar to the above omitted 
    2086 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    2087 -1 N LEU l 102 O LEU l 33 
    2088 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    2089 0 
    2090 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    2091 -1 N LYS l 133 O SER l 30 
    2092 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    2093 0 
    2094 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    2095 115 -1 N ILE m 113 O ILE m 34 
    2096 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    2097 103 -1 N CYS m 100 O MET m 110 
    2098 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    2099 0 
    2100 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    2101 -1 N VAL n 39 O VAL n 49 
    2102 55 messages similar to the above omitted 
    2103 Cannot find LINK/SSBOND residue ZN (101 ) 
    2104 Cannot find LINK/SSBOND residue ZN (101 ) 
    2105 Cannot find LINK/SSBOND residue ZN (101 ) 
    2106 Cannot find LINK/SSBOND residue ZN (101 ) 
    2107  
    2108 Chain information for d9_J84_cl1 #7 
    2109 --- 
    2110 Chain | Description 
    2111 3 | No description available 
    2112 Y | No description available 
    2113 Z | No description available 
    2114 a | No description available 
    2115 b | No description available 
    2116 c | No description available 
    2117 e | No description available 
    2118 l | No description available 
    2119 v | No description available 
    2120  
    2121 
    2122 > open
    2123 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J85-coot-6.pdb
    2124 > id 6.2 name d9_J85_cl2
    2125 
    2126 Summary of feedback from opening
    2127 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J85-coot-6.pdb 
    2128 --- 
    2129 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2130 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    2131 6 
    2132 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    2133 8 
    2134 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    2135 23 
    2136 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    2137 13 
    2138 320 messages similar to the above omitted 
    2139 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    2140 -1 N LEU l 102 O LEU l 33 
    2141 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    2142 0 
    2143 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    2144 -1 N LYS l 133 O SER l 30 
    2145 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    2146 0 
    2147 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    2148 115 -1 N ILE m 113 O ILE m 34 
    2149 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    2150 103 -1 N CYS m 100 O MET m 110 
    2151 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    2152 0 
    2153 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    2154 -1 N VAL n 39 O VAL n 49 
    2155 55 messages similar to the above omitted 
    2156 Cannot find LINK/SSBOND residue ZN (101 ) 
    2157 Cannot find LINK/SSBOND residue ZN (101 ) 
    2158 Cannot find LINK/SSBOND residue ZN (101 ) 
    2159 Cannot find LINK/SSBOND residue ZN (101 ) 
    2160  
    2161 Chain information for d9_J85_cl2 #7 
    2162 --- 
    2163 Chain | Description 
    2164 3 | No description available 
    2165 Y | No description available 
    2166 Z | No description available 
    2167 a | No description available 
    2168 b | No description available 
    2169 c | No description available 
    2170 e | No description available 
    2171 l | No description available 
    2172 v | No description available 
    2173  
    2174 
    2175 > open
    2176 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J86-coot-6.pdb
    2177 > id 6.3 name d9_J86_cl3
    2178 
    2179 Summary of feedback from opening
    2180 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J86-coot-6.pdb 
    2181 --- 
    2182 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2183 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    2184 6 
    2185 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    2186 8 
    2187 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    2188 23 
    2189 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    2190 13 
    2191 320 messages similar to the above omitted 
    2192 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    2193 -1 N LEU l 102 O LEU l 33 
    2194 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    2195 0 
    2196 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    2197 -1 N LYS l 133 O SER l 30 
    2198 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    2199 0 
    2200 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    2201 115 -1 N ILE m 113 O ILE m 34 
    2202 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    2203 103 -1 N CYS m 100 O MET m 110 
    2204 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    2205 0 
    2206 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    2207 -1 N VAL n 39 O VAL n 49 
    2208 55 messages similar to the above omitted 
    2209 Cannot find LINK/SSBOND residue ZN (101 ) 
    2210 Cannot find LINK/SSBOND residue ZN (101 ) 
    2211 Cannot find LINK/SSBOND residue ZN (101 ) 
    2212 Cannot find LINK/SSBOND residue ZN (101 ) 
    2213  
    2214 Chain information for d9_J86_cl3 #7 
    2215 --- 
    2216 Chain | Description 
    2217 3 | No description available 
    2218 Y | No description available 
    2219 Z | No description available 
    2220 a | No description available 
    2221 b | No description available 
    2222 c | No description available 
    2223 e | No description available 
    2224 l | No description available 
    2225 v | No description available 
    2226  
    2227 
    2228 > open
    2229 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J87-coot-6.pdb
    2230 > id 6.4 name d9_J87_cl4
    2231 
    2232 Summary of feedback from opening
    2233 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J87-coot-6.pdb 
    2234 --- 
    2235 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2236 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    2237 6 
    2238 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    2239 8 
    2240 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    2241 23 
    2242 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    2243 13 
    2244 320 messages similar to the above omitted 
    2245 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    2246 -1 N LEU l 102 O LEU l 33 
    2247 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    2248 0 
    2249 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    2250 -1 N LYS l 133 O SER l 30 
    2251 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    2252 0 
    2253 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    2254 115 -1 N ILE m 113 O ILE m 34 
    2255 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    2256 103 -1 N CYS m 100 O MET m 110 
    2257 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    2258 0 
    2259 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    2260 -1 N VAL n 39 O VAL n 49 
    2261 55 messages similar to the above omitted 
    2262 Cannot find LINK/SSBOND residue ZN (101 ) 
    2263 Cannot find LINK/SSBOND residue ZN (101 ) 
    2264 Cannot find LINK/SSBOND residue ZN (101 ) 
    2265 Cannot find LINK/SSBOND residue ZN (101 ) 
    2266  
    2267 Chain information for d9_J87_cl4 #7 
    2268 --- 
    2269 Chain | Description 
    2270 3 | No description available 
    2271 Y | No description available 
    2272 Z | No description available 
    2273 a | No description available 
    2274 b | No description available 
    2275 c | No description available 
    2276 e | No description available 
    2277 l | No description available 
    2278 v | No description available 
    2279  
    2280 
    2281 > open
    2282 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J88-coot-6.pdb
    2283 > id 6.5 name d9_J88_cl5
    2284 
    2285 Summary of feedback from opening
    2286 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J88-coot-6.pdb 
    2287 --- 
    2288 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2289 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    2290 6 
    2291 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    2292 8 
    2293 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    2294 23 
    2295 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    2296 13 
    2297 320 messages similar to the above omitted 
    2298 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    2299 -1 N LEU l 102 O LEU l 33 
    2300 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    2301 0 
    2302 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    2303 -1 N LYS l 133 O SER l 30 
    2304 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    2305 0 
    2306 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    2307 115 -1 N ILE m 113 O ILE m 34 
    2308 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    2309 103 -1 N CYS m 100 O MET m 110 
    2310 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    2311 0 
    2312 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    2313 -1 N VAL n 39 O VAL n 49 
    2314 55 messages similar to the above omitted 
    2315 Cannot find LINK/SSBOND residue ZN (101 ) 
    2316 Cannot find LINK/SSBOND residue ZN (101 ) 
    2317 Cannot find LINK/SSBOND residue ZN (101 ) 
    2318 Cannot find LINK/SSBOND residue ZN (101 ) 
    2319  
    2320 Chain information for d9_J88_cl5 #7 
    2321 --- 
    2322 Chain | Description 
    2323 3 | No description available 
    2324 a | No description available 
    2325 b | No description available 
    2326 c | No description available 
    2327 e | No description available 
    2328 l | No description available 
    2329 v | No description available 
    2330  
    2331 
    2332 > open
    2333 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J89-coot-6.pdb
    2334 > id 6.6 name d9_J89_cl6
    2335 
    2336 Summary of feedback from opening
    2337 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J89-coot-6.pdb 
    2338 --- 
    2339 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2340 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    2341 6 
    2342 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    2343 8 
    2344 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    2345 23 
    2346 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    2347 13 
    2348 320 messages similar to the above omitted 
    2349 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    2350 -1 N LEU l 102 O LEU l 33 
    2351 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    2352 0 
    2353 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    2354 -1 N LYS l 133 O SER l 30 
    2355 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    2356 0 
    2357 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    2358 115 -1 N ILE m 113 O ILE m 34 
    2359 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    2360 103 -1 N CYS m 100 O MET m 110 
    2361 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    2362 0 
    2363 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    2364 -1 N VAL n 39 O VAL n 49 
    2365 55 messages similar to the above omitted 
    2366 Cannot find LINK/SSBOND residue ZN (101 ) 
    2367 Cannot find LINK/SSBOND residue ZN (101 ) 
    2368 Cannot find LINK/SSBOND residue ZN (101 ) 
    2369 Cannot find LINK/SSBOND residue ZN (101 ) 
    2370  
    2371 Chain information for d9_J89_cl6 #7 
    2372 --- 
    2373 Chain | Description 
    2374 3 | No description available 
    2375 Y | No description available 
    2376 Z | No description available 
    2377 a | No description available 
    2378 b | No description available 
    2379 c | No description available 
    2380 e | No description available 
    2381 l | No description available 
    2382 v | No description available 
    2383  
    2384 
    2385 > open
    2386 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J90-coot-6.pdb
    2387 > id 6.7 name d9_J90_cl7
    2388 
    2389 Summary of feedback from opening
    2390 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J90-coot-6.pdb 
    2391 --- 
    2392 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2393 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    2394 6 
    2395 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    2396 8 
    2397 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    2398 23 
    2399 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    2400 13 
    2401 320 messages similar to the above omitted 
    2402 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    2403 -1 N LEU l 102 O LEU l 33 
    2404 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    2405 0 
    2406 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    2407 -1 N LYS l 133 O SER l 30 
    2408 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    2409 0 
    2410 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    2411 115 -1 N ILE m 113 O ILE m 34 
    2412 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    2413 103 -1 N CYS m 100 O MET m 110 
    2414 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    2415 0 
    2416 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    2417 -1 N VAL n 39 O VAL n 49 
    2418 55 messages similar to the above omitted 
    2419 Cannot find LINK/SSBOND residue ZN (101 ) 
    2420 Cannot find LINK/SSBOND residue ZN (101 ) 
    2421 Cannot find LINK/SSBOND residue ZN (101 ) 
    2422 Cannot find LINK/SSBOND residue ZN (101 ) 
    2423  
    2424 Chain information for d9_J90_cl7 #7 
    2425 --- 
    2426 Chain | Description 
    2427 3 | No description available 
    2428 Y | No description available 
    2429 Z | No description available 
    2430 a | No description available 
    2431 b | No description available 
    2432 c | No description available 
    2433 e | No description available 
    2434 l | No description available 
    2435 v | No description available 
    2436  
    2437 
    2438 > open
    2439 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J91-coot-6.pdb
    2440 > id 6.8 name d9_J91_cl8
    2441 
    2442 Summary of feedback from opening
    2443 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J91-coot-6.pdb 
    2444 --- 
    2445 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2446 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    2447 6 
    2448 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    2449 8 
    2450 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    2451 23 
    2452 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    2453 13 
    2454 320 messages similar to the above omitted 
    2455 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    2456 -1 N LEU l 102 O LEU l 33 
    2457 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    2458 0 
    2459 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    2460 -1 N LYS l 133 O SER l 30 
    2461 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    2462 0 
    2463 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    2464 115 -1 N ILE m 113 O ILE m 34 
    2465 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    2466 103 -1 N CYS m 100 O MET m 110 
    2467 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    2468 0 
    2469 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    2470 -1 N VAL n 39 O VAL n 49 
    2471 55 messages similar to the above omitted 
    2472 Cannot find LINK/SSBOND residue ZN (101 ) 
    2473 Cannot find LINK/SSBOND residue ZN (101 ) 
    2474 Cannot find LINK/SSBOND residue ZN (101 ) 
    2475 Cannot find LINK/SSBOND residue ZN (101 ) 
    2476  
    2477 Chain information for d9_J91_cl8 #7 
    2478 --- 
    2479 Chain | Description 
    2480 3 | No description available 
    2481 a | No description available 
    2482 b | No description available 
    2483 c | No description available 
    2484 e | No description available 
    2485 l | No description available 
    2486 v | No description available 
    2487  
    2488 
    2489 > open
    2490 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J92-coot-6.pdb
    2491 > id 6.9 name d9_J92_cl9
    2492 
    2493 Summary of feedback from opening
    2494 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J92-coot-6.pdb 
    2495 --- 
    2496 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2497 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    2498 6 
    2499 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    2500 8 
    2501 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    2502 23 
    2503 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    2504 13 
    2505 320 messages similar to the above omitted 
    2506 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    2507 -1 N LEU l 102 O LEU l 33 
    2508 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    2509 0 
    2510 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    2511 -1 N LYS l 133 O SER l 30 
    2512 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    2513 0 
    2514 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    2515 115 -1 N ILE m 113 O ILE m 34 
    2516 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    2517 103 -1 N CYS m 100 O MET m 110 
    2518 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    2519 0 
    2520 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    2521 -1 N VAL n 39 O VAL n 49 
    2522 55 messages similar to the above omitted 
    2523 Cannot find LINK/SSBOND residue ZN (101 ) 
    2524 Cannot find LINK/SSBOND residue ZN (101 ) 
    2525 Cannot find LINK/SSBOND residue ZN (101 ) 
    2526 Cannot find LINK/SSBOND residue ZN (101 ) 
    2527  
    2528 Chain information for d9_J92_cl9 #7 
    2529 --- 
    2530 Chain | Description 
    2531 3 | No description available 
    2532 Y | No description available 
    2533 Z | No description available 
    2534 a | No description available 
    2535 b | No description available 
    2536 c | No description available 
    2537 e | No description available 
    2538 l | No description available 
    2539 v | No description available 
    2540  
    2541 
    2542 > rename #6 d9-PTC-models
    2543 
    2544 > open
    2545 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_refine3d_job086_APE_0.70469Apix.mrc
    2546 > id 10.1 name d10_ape
    2547 
    2548 Opened d10_ape as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    2549 level 0.0256, step 2, values float32 
    2550 
    2551 > open
    2552 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_refine3d_job085_PE_0.70469Apix.mrc
    2553 > id 10.2 name d10_pe
    2554 
    2555 Opened d10_pe as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    2556 level 0.0264, step 2, values float32 
    2557 
    2558 > open
    2559 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_refine3d_job084_E_0.70469Apix.mrc
    2560 > id 10.3 name d10_e
    2561 
    2562 Opened d10_e as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    2563 level 0.024, step 2, values float32 
    2564 
    2565 > rename #10 d10
    2566 
    2567 > open
    2568 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_localres_job095_classAPE_0.70469Apix.mrc
    2569 > id 11.1 name d10_ape
    2570 
    2571 Opened d10_ape as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    2572 level 0.0779, step 2, values float32 
    2573 
    2574 > open
    2575 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_localres_job094_classPE_0.70469Apix.mrc
    2576 > id 11.2 name d10_pe
    2577 
    2578 Opened d10_pe as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    2579 level 0.0807, step 2, values float32 
    2580 
    2581 > open
    2582 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_localres_job093_classE_0.70469Apix.mrc
    2583 > id 11.3 name d10_e
    2584 
    2585 Opened d10_e as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    2586 level 0.0701, step 2, values float32 
    2587 
    2588 > rename #11 d10-sharp
    2589 
    2590 > open
    2591 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_NU_J53_PTCclass0_0.70469Apix.mrc
    2592 > id 12.10 name d10_J53_c0
    2593 
    2594 Opened d10_J53_c0 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2595 at level 0.789, step 2, values float32 
    2596 
    2597 > open
    2598 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_NU_J54_PTCclass1_0.70469Apix.mrc
    2599 > id 12.1 name d10_J54_c1
    2600 
    2601 Opened d10_J54_c1 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2602 at level 0.796, step 2, values float32 
    2603 
    2604 > open
    2605 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_NU_J55_PTCclass2_0.70469Apix.mrc
    2606 > id 12.2 name d10_J55_c2
    2607 
    2608 Opened d10_J55_c2 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2609 at level 0.79, step 2, values float32 
    2610 
    2611 > open
    2612 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_NU_J56_PTCclass3_0.70469Apix.mrc
    2613 > id 12.3 name d10_J56_c3
    2614 
    2615 Opened d10_J56_c3 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2616 at level 0.797, step 2, values float32 
    2617 
    2618 > open
    2619 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_NU_J57_PTCclass4_0.70469Apix.mrc
    2620 > id 12.4 name d10_J57_c4
    2621 
    2622 Opened d10_J57_c4 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2623 at level 0.791, step 2, values float32 
    2624 
    2625 > open
    2626 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_NU_J58_PTCclass5_0.70469Apix.mrc
    2627 > id 12.5 name d10_J58_c5
    2628 
    2629 Opened d10_J58_c5 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2630 at level 0.791, step 2, values float32 
    2631 
    2632 > open
    2633 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_NU_J59_PTCclass6_0.70469Apix.mrc
    2634 > id 12.6 name d10_J59_c6
    2635 
    2636 Opened d10_J59_c6 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2637 at level 0.8, step 2, values float32 
    2638 
    2639 > open
    2640 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_NU_J60_PTCclass7_0.70469Apix.mrc
    2641 > id 12.7 name d10_J60_c7
    2642 
    2643 Opened d10_J60_c7 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2644 at level 0.799, step 2, values float32 
    2645 
    2646 > open
    2647 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_NU_J61_PTCclass8_0.70469Apix.mrc
    2648 > id 12.8 name d10_J61_c8
    2649 
    2650 Opened d10_J61_c8 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2651 at level 0.791, step 2, values float32 
    2652 
    2653 > open
    2654 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_NU_J62_PTCclass9_0.70469Apix.mrc
    2655 > id 12.9 name d10_J62_c9
    2656 
    2657 Opened d10_J62_c9 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2658 at level 0.795, step 2, values float32 
    2659 
    2660 > rename #12 d10-PTC
    2661 
    2662 > open
    2663 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_LF_J96_PTCclass0_0.70469Apix.mrc
    2664 > id 13.10 name d10_J53_c0
    2665 
    2666 Opened d10_J53_c0 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2667 at level 1.19, step 2, values float32 
    2668 
    2669 > open
    2670 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_LF_J97_PTCclass1_0.70469Apix.mrc
    2671 > id 13.1 name d10_J54_c1
    2672 
    2673 Opened d10_J54_c1 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2674 at level 1.21, step 2, values float32 
    2675 
    2676 > open
    2677 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_LF_J98_PTCclass2_0.70469Apix.mrc
    2678 > id 13.2 name d10_J55_c2
    2679 
    2680 Opened d10_J55_c2 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2681 at level 1.2, step 2, values float32 
    2682 
    2683 > open
    2684 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_LF_J99_PTCclass3_0.70469Apix.mrc
    2685 > id 13.3 name d10_J56_c3
    2686 
    2687 Opened d10_J56_c3 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2688 at level 1.23, step 2, values float32 
    2689 
    2690 > open
    2691 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_LF_J100_PTCclass4_0.70469Apix.mrc
    2692 > id 13.4 name d10_J57_c4
    2693 
    2694 Opened d10_J57_c4 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2695 at level 1.2, step 2, values float32 
    2696 
    2697 > open
    2698 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_LF_J101_PTCclass5_0.70469Apix.mrc
    2699 > id 13.5 name d10_J58_c5
    2700 
    2701 Opened d10_J58_c5 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2702 at level 1.21, step 2, values float32 
    2703 
    2704 > open
    2705 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_LF_J102_PTCclass6_0.70469Apix.mrc
    2706 > id 13.6 name d10_J59_c6
    2707 
    2708 Opened d10_J59_c6 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2709 at level 1.23, step 2, values float32 
    2710 
    2711 > open
    2712 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_LF_J103_PTCclass7_0.70469Apix.mrc
    2713 > id 13.7 name d10_J60_c7
    2714 
    2715 Opened d10_J60_c7 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2716 at level 1.24, step 2, values float32 
    2717 
    2718 > open
    2719 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_LF_J104_PTCclass8_0.70469Apix.mrc
    2720 > id 13.8 name d10_J61_c8
    2721 
    2722 Opened d10_J61_c8 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2723 at level 1.21, step 2, values float32 
    2724 
    2725 > open
    2726 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delta10_LF_J105_PTCclass9_0.70469Apix.mrc
    2727 > id 13.9 name d10_J62_c9
    2728 
    2729 Opened d10_J62_c9 as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    2730 at level 1.23, step 2, values float32 
    2731 
    2732 > rename #13 d10-PTC-sharp
    2733 
    2734 > open
    2735 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J53-coot-3.pdb
    2736 > id 14.10 name d10_J53_c0
    2737 
    2738 Summary of feedback from opening
    2739 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J53-coot-3.pdb 
    2740 --- 
    2741 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2742 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    2743 6 
    2744 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    2745 8 
    2746 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    2747 23 
    2748 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    2749 13 
    2750 320 messages similar to the above omitted 
    2751 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    2752 -1 N LEU l 102 O LEU l 33 
    2753 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    2754 0 
    2755 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    2756 -1 N LYS l 133 O SER l 30 
    2757 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    2758 0 
    2759 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    2760 115 -1 N ILE m 113 O ILE m 34 
    2761 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    2762 103 -1 N CYS m 100 O MET m 110 
    2763 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    2764 0 
    2765 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    2766 -1 N VAL n 39 O VAL n 49 
    2767 55 messages similar to the above omitted 
    2768 Cannot find LINK/SSBOND residue ZN (101 ) 
    2769 Cannot find LINK/SSBOND residue ZN (101 ) 
    2770 Cannot find LINK/SSBOND residue ZN (101 ) 
    2771 Cannot find LINK/SSBOND residue ZN (101 ) 
    2772  
    2773 Chain information for d10_J53_c0 #7 
    2774 --- 
    2775 Chain | Description 
    2776 3 | No description available 
    2777 a | No description available 
    2778 b | No description available 
    2779 c | No description available 
    2780 e | No description available 
    2781 l | No description available 
    2782 v | No description available 
    2783  
    2784 
    2785 > open
    2786 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J54-coot-3.pdb
    2787 > id 14.1 name d10_J54_c1
    2788 
    2789 Summary of feedback from opening
    2790 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J54-coot-3.pdb 
    2791 --- 
    2792 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2793 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    2794 6 
    2795 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    2796 8 
    2797 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    2798 23 
    2799 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    2800 13 
    2801 320 messages similar to the above omitted 
    2802 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    2803 -1 N LEU l 102 O LEU l 33 
    2804 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    2805 0 
    2806 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    2807 -1 N LYS l 133 O SER l 30 
    2808 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    2809 0 
    2810 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    2811 115 -1 N ILE m 113 O ILE m 34 
    2812 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    2813 103 -1 N CYS m 100 O MET m 110 
    2814 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    2815 0 
    2816 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    2817 -1 N VAL n 39 O VAL n 49 
    2818 55 messages similar to the above omitted 
    2819 Cannot find LINK/SSBOND residue ZN (101 ) 
    2820 Cannot find LINK/SSBOND residue ZN (101 ) 
    2821 Cannot find LINK/SSBOND residue ZN (101 ) 
    2822 Cannot find LINK/SSBOND residue ZN (101 ) 
    2823  
    2824 Chain information for d10_J54_c1 #7 
    2825 --- 
    2826 Chain | Description 
    2827 3 | No description available 
    2828 a | No description available 
    2829 b | No description available 
    2830 c | No description available 
    2831 e | No description available 
    2832 l | No description available 
    2833 v | No description available 
    2834  
    2835 
    2836 > open
    2837 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J55-coot-3.pdb
    2838 > id 14.2 name d10_J55_c2
    2839 
    2840 Summary of feedback from opening
    2841 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J55-coot-3.pdb 
    2842 --- 
    2843 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2844 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    2845 6 
    2846 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    2847 8 
    2848 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    2849 23 
    2850 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    2851 13 
    2852 320 messages similar to the above omitted 
    2853 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    2854 -1 N LEU l 102 O LEU l 33 
    2855 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    2856 0 
    2857 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    2858 -1 N LYS l 133 O SER l 30 
    2859 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    2860 0 
    2861 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    2862 115 -1 N ILE m 113 O ILE m 34 
    2863 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    2864 103 -1 N CYS m 100 O MET m 110 
    2865 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    2866 0 
    2867 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    2868 -1 N VAL n 39 O VAL n 49 
    2869 55 messages similar to the above omitted 
    2870 Cannot find LINK/SSBOND residue ZN (101 ) 
    2871 Cannot find LINK/SSBOND residue ZN (101 ) 
    2872 Cannot find LINK/SSBOND residue ZN (101 ) 
    2873 Cannot find LINK/SSBOND residue ZN (101 ) 
    2874  
    2875 Chain information for d10_J55_c2 #7 
    2876 --- 
    2877 Chain | Description 
    2878 3 | No description available 
    2879 a | No description available 
    2880 b | No description available 
    2881 c | No description available 
    2882 e | No description available 
    2883 l | No description available 
    2884 v | No description available 
    2885  
    2886 
    2887 > open
    2888 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J56-coot-3.pdb
    2889 > id 14.3 name d10_J56_c3
    2890 
    2891 Summary of feedback from opening
    2892 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J56-coot-3.pdb 
    2893 --- 
    2894 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2895 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    2896 6 
    2897 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    2898 8 
    2899 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    2900 23 
    2901 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    2902 13 
    2903 320 messages similar to the above omitted 
    2904 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    2905 -1 N LEU l 102 O LEU l 33 
    2906 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    2907 0 
    2908 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    2909 -1 N LYS l 133 O SER l 30 
    2910 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    2911 0 
    2912 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    2913 115 -1 N ILE m 113 O ILE m 34 
    2914 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    2915 103 -1 N CYS m 100 O MET m 110 
    2916 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    2917 0 
    2918 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    2919 -1 N VAL n 39 O VAL n 49 
    2920 55 messages similar to the above omitted 
    2921 Cannot find LINK/SSBOND residue ZN (101 ) 
    2922 Cannot find LINK/SSBOND residue ZN (101 ) 
    2923 Cannot find LINK/SSBOND residue ZN (101 ) 
    2924 Cannot find LINK/SSBOND residue ZN (101 ) 
    2925  
    2926 Chain information for d10_J56_c3 #7 
    2927 --- 
    2928 Chain | Description 
    2929 3 | No description available 
    2930 Y | No description available 
    2931 Z | No description available 
    2932 a | No description available 
    2933 b | No description available 
    2934 c | No description available 
    2935 e | No description available 
    2936 l | No description available 
    2937 v | No description available 
    2938  
    2939 
    2940 > open
    2941 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J57-coot-3.pdb
    2942 > id 14.4 name d10_J57_c4
    2943 
    2944 Summary of feedback from opening
    2945 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J57-coot-3.pdb 
    2946 --- 
    2947 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2948 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    2949 6 
    2950 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    2951 8 
    2952 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    2953 23 
    2954 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    2955 13 
    2956 320 messages similar to the above omitted 
    2957 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    2958 -1 N LEU l 102 O LEU l 33 
    2959 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    2960 0 
    2961 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    2962 -1 N LYS l 133 O SER l 30 
    2963 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    2964 0 
    2965 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    2966 115 -1 N ILE m 113 O ILE m 34 
    2967 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    2968 103 -1 N CYS m 100 O MET m 110 
    2969 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    2970 0 
    2971 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    2972 -1 N VAL n 39 O VAL n 49 
    2973 55 messages similar to the above omitted 
    2974 Cannot find LINK/SSBOND residue ZN (101 ) 
    2975 Cannot find LINK/SSBOND residue ZN (101 ) 
    2976 Cannot find LINK/SSBOND residue ZN (101 ) 
    2977 Cannot find LINK/SSBOND residue ZN (101 ) 
    2978  
    2979 Chain information for d10_J57_c4 #7 
    2980 --- 
    2981 Chain | Description 
    2982 3 | No description available 
    2983 a | No description available 
    2984 b | No description available 
    2985 c | No description available 
    2986 e | No description available 
    2987 l | No description available 
    2988 v | No description available 
    2989  
    2990 
    2991 > open
    2992 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J58-coot-3.pdb
    2993 > id 14.5 name d10_J58_c5
    2994 
    2995 Summary of feedback from opening
    2996 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J58-coot-3.pdb 
    2997 --- 
    2998 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    2999 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    3000 6 
    3001 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    3002 8 
    3003 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    3004 23 
    3005 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    3006 13 
    3007 320 messages similar to the above omitted 
    3008 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    3009 -1 N LEU l 102 O LEU l 33 
    3010 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    3011 0 
    3012 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    3013 -1 N LYS l 133 O SER l 30 
    3014 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    3015 0 
    3016 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    3017 115 -1 N ILE m 113 O ILE m 34 
    3018 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    3019 103 -1 N CYS m 100 O MET m 110 
    3020 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    3021 0 
    3022 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    3023 -1 N VAL n 39 O VAL n 49 
    3024 55 messages similar to the above omitted 
    3025 Cannot find LINK/SSBOND residue ZN (101 ) 
    3026 Cannot find LINK/SSBOND residue ZN (101 ) 
    3027 Cannot find LINK/SSBOND residue ZN (101 ) 
    3028 Cannot find LINK/SSBOND residue ZN (101 ) 
    3029  
    3030 Chain information for d10_J58_c5 #7 
    3031 --- 
    3032 Chain | Description 
    3033 3 | No description available 
    3034 Z | No description available 
    3035 a | No description available 
    3036 b | No description available 
    3037 c | No description available 
    3038 e | No description available 
    3039 l | No description available 
    3040 v | No description available 
    3041  
    3042 
    3043 > open
    3044 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J59-coot-3.pdb
    3045 > id 14.6 name d10_J59_c6
    3046 
    3047 Summary of feedback from opening
    3048 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J59-coot-3.pdb 
    3049 --- 
    3050 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    3051 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    3052 6 
    3053 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    3054 8 
    3055 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    3056 23 
    3057 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    3058 13 
    3059 320 messages similar to the above omitted 
    3060 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    3061 -1 N LEU l 102 O LEU l 33 
    3062 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    3063 0 
    3064 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    3065 -1 N LYS l 133 O SER l 30 
    3066 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    3067 0 
    3068 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    3069 115 -1 N ILE m 113 O ILE m 34 
    3070 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    3071 103 -1 N CYS m 100 O MET m 110 
    3072 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    3073 0 
    3074 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    3075 -1 N VAL n 39 O VAL n 49 
    3076 55 messages similar to the above omitted 
    3077 Cannot find LINK/SSBOND residue ZN (101 ) 
    3078 Cannot find LINK/SSBOND residue ZN (101 ) 
    3079 Cannot find LINK/SSBOND residue ZN (101 ) 
    3080 Cannot find LINK/SSBOND residue ZN (101 ) 
    3081  
    3082 Chain information for d10_J59_c6 #7 
    3083 --- 
    3084 Chain | Description 
    3085 3 | No description available 
    3086 Z | No description available 
    3087 a | No description available 
    3088 b | No description available 
    3089 c | No description available 
    3090 e | No description available 
    3091 l | No description available 
    3092 v | No description available 
    3093  
    3094 
    3095 > open
    3096 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J60-coot-3.pdb
    3097 > id 14.7 name d10_J60_c7
    3098 
    3099 Summary of feedback from opening
    3100 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J60-coot-3.pdb 
    3101 --- 
    3102 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    3103 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    3104 6 
    3105 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    3106 8 
    3107 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    3108 23 
    3109 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    3110 13 
    3111 320 messages similar to the above omitted 
    3112 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    3113 -1 N LEU l 102 O LEU l 33 
    3114 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    3115 0 
    3116 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    3117 -1 N LYS l 133 O SER l 30 
    3118 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    3119 0 
    3120 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    3121 115 -1 N ILE m 113 O ILE m 34 
    3122 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    3123 103 -1 N CYS m 100 O MET m 110 
    3124 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    3125 0 
    3126 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    3127 -1 N VAL n 39 O VAL n 49 
    3128 55 messages similar to the above omitted 
    3129 Cannot find LINK/SSBOND residue ZN (101 ) 
    3130 Cannot find LINK/SSBOND residue ZN (101 ) 
    3131 Cannot find LINK/SSBOND residue ZN (101 ) 
    3132 Cannot find LINK/SSBOND residue ZN (101 ) 
    3133  
    3134 Chain information for d10_J60_c7 #7 
    3135 --- 
    3136 Chain | Description 
    3137 3 | No description available 
    3138 Z | No description available 
    3139 a | No description available 
    3140 b | No description available 
    3141 c | No description available 
    3142 e | No description available 
    3143 l | No description available 
    3144 v | No description available 
    3145  
    3146 
    3147 > open
    3148 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J61-coot-3.pdb
    3149 > id 14.8 name d10_J61_c8
    3150 
    3151 Summary of feedback from opening
    3152 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J61-coot-3.pdb 
    3153 --- 
    3154 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    3155 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    3156 6 
    3157 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    3158 8 
    3159 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    3160 23 
    3161 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    3162 13 
    3163 320 messages similar to the above omitted 
    3164 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    3165 -1 N LEU l 102 O LEU l 33 
    3166 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    3167 0 
    3168 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    3169 -1 N LYS l 133 O SER l 30 
    3170 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    3171 0 
    3172 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    3173 115 -1 N ILE m 113 O ILE m 34 
    3174 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    3175 103 -1 N CYS m 100 O MET m 110 
    3176 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    3177 0 
    3178 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    3179 -1 N VAL n 39 O VAL n 49 
    3180 55 messages similar to the above omitted 
    3181 Cannot find LINK/SSBOND residue ZN (101 ) 
    3182 Cannot find LINK/SSBOND residue ZN (101 ) 
    3183 Cannot find LINK/SSBOND residue ZN (101 ) 
    3184 Cannot find LINK/SSBOND residue ZN (101 ) 
    3185  
    3186 Chain information for d10_J61_c8 #7 
    3187 --- 
    3188 Chain | Description 
    3189 3 | No description available 
    3190 Z | No description available 
    3191 a | No description available 
    3192 b | No description available 
    3193 c | No description available 
    3194 e | No description available 
    3195 l | No description available 
    3196 v | No description available 
    3197  
    3198 
    3199 > open
    3200 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J62-coot-3.pdb
    3201 > id 14.9 name d10_J62_c9
    3202 
    3203 Summary of feedback from opening
    3204 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J62-coot-3.pdb 
    3205 --- 
    3206 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    3207 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    3208 6 
    3209 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    3210 8 
    3211 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    3212 23 
    3213 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    3214 13 
    3215 320 messages similar to the above omitted 
    3216 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    3217 -1 N LEU l 102 O LEU l 33 
    3218 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    3219 0 
    3220 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    3221 -1 N LYS l 133 O SER l 30 
    3222 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    3223 0 
    3224 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    3225 115 -1 N ILE m 113 O ILE m 34 
    3226 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    3227 103 -1 N CYS m 100 O MET m 110 
    3228 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    3229 0 
    3230 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    3231 -1 N VAL n 39 O VAL n 49 
    3232 55 messages similar to the above omitted 
    3233 Cannot find LINK/SSBOND residue ZN (101 ) 
    3234 Cannot find LINK/SSBOND residue ZN (101 ) 
    3235 Cannot find LINK/SSBOND residue ZN (101 ) 
    3236 Cannot find LINK/SSBOND residue ZN (101 ) 
    3237  
    3238 Chain information for d10_J62_c9 #7 
    3239 --- 
    3240 Chain | Description 
    3241 3 | No description available 
    3242 Y | No description available 
    3243 Z | No description available 
    3244 a | No description available 
    3245 b | No description available 
    3246 c | No description available 
    3247 e | No description available 
    3248 l | No description available 
    3249 v | No description available 
    3250  
    3251 
    3252 > rename #14 d10-PTC-models
    3253 
    3254 > open
    3255 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/deltaE_HOMO_J111_APE_0.70469Apix.mrc
    3256 > id 20.1 name dE_ape
    3257 
    3258 Opened dE_ape as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    3259 level 0.378, step 2, values float32 
    3260 
    3261 > open
    3262 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/deltaE_HOMO_J112_AP_0.70469Apix.mrc
    3263 > id 20.2 name dE_ap
    3264 
    3265 Opened dE_ap as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    3266 level 0.353, step 2, values float32 
    3267 
    3268 > open
    3269 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/deltaE_HOMO_J113_PE_0.70469Apix.mrc
    3270 > id 20.3 name dE_pe
    3271 
    3272 Opened dE_pe as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    3273 level 0.396, step 2, values float32 
    3274 
    3275 > open
    3276 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/deltaE_HOMO_J124_E_0.70469Apix.mrc
    3277 > id 20.4 name dE_e
    3278 
    3279 Opened dE_e as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    3280 level 0.336, step 2, values float32 
    3281 
    3282 > rename #20 dE
    3283 
    3284 > open
    3285 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/deltaE_SHARP_J111_APE_0.70469Apix.mrc
    3286 > id 21.1 name dE_ape
    3287 
    3288 Opened dE_ape as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    3289 level 0.565, step 2, values float32 
    3290 
    3291 > open
    3292 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/deltaE_SHARP_J112_AP_0.70469Apix.mrc
    3293 > id 21.2 name dE_ap
    3294 
    3295 Opened dE_ap as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    3296 level 0.452, step 2, values float32 
    3297 
    3298 > open
    3299 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/deltaE_SHARP_J113_PE_0.70469Apix.mrc
    3300 > id 21.3 name dE_pe
    3301 
    3302 Opened dE_pe as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    3303 level 0.593, step 2, values float32 
    3304 
    3305 > open
    3306 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/deltaE_SHARP_J124_E_0.70469Apix.mrc
    3307 > id 21.4 name dE_e
    3308 
    3309 Opened dE_e as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown at
    3310 level 0.436, step 2, values float32 
    3311 
    3312 > rename #21 dE-sharp
    3313 
    3314 > hide cartoons
    3315 
    3316 > hide atoms
    3317 
    3318 > style stick
    3319 
    3320 Changed 825834 atom styles 
    3321 
    3322 > hide #!1.1 models
    3323 
    3324 > show #!1.1 models
    3325 
    3326 > hide #!1.2 models
    3327 
    3328 > show #!1.2 models
    3329 
    3330 > hide #!*.* models
    3331 
    3332 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj111-APE-PTC-
    3333 > coot-1.pdb id 22.1 name dE_J111_ape
    3334 
    3335 Summary of feedback from opening
    3336 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj111-APE-PTC-coot-1.pdb 
    3337 --- 
    3338 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    3339 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    3340 6 
    3341 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    3342 8 
    3343 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    3344 23 
    3345 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    3346 13 
    3347 135 messages similar to the above omitted 
    3348 End residue of secondary structure not found: HELIX 141 141 THR l 42 LYS l 58
    3349 1 17 
    3350 Start residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l
    3351 125 1 17 
    3352 Start residue of secondary structure not found: HELIX 143 143 ASN m 13 GLU m
    3353 32 1 20 
    3354 Start residue of secondary structure not found: HELIX 144 144 LEU m 38 ASP m
    3355 58 1 21 
    3356 Start residue of secondary structure not found: HELIX 145 145 SER m 59 ARG m
    3357 71 1 13 
    3358 Start residue of secondary structure not found: HELIX 146 146 ASP m 72 ALA m
    3359 88 1 17 
    3360 Start residue of secondary structure not found: HELIX 147 147 ASP n 2 GLY n 22
    3361 1 21 
    3362 178 messages similar to the above omitted 
    3363 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    3364 -1 N LEU l 102 O LEU l 33 
    3365 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    3366 0 
    3367 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    3368 -1 N LYS l 133 O SER l 30 
    3369 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    3370 0 
    3371 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    3372 115 -1 N ILE m 113 O ILE m 34 
    3373 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    3374 103 -1 N CYS m 100 O MET m 110 
    3375 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    3376 0 
    3377 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    3378 -1 N VAL n 39 O VAL n 49 
    3379 55 messages similar to the above omitted 
    3380 Cannot find LINK/SSBOND residue ZN (101 ) 
    3381 Cannot find LINK/SSBOND residue ZN (101 ) 
    3382 Cannot find LINK/SSBOND residue ZN (101 ) 
    3383 Cannot find LINK/SSBOND residue ZN (101 ) 
    3384  
    3385 Chain information for dE_J111_ape #7 
    3386 --- 
    3387 Chain | Description 
    3388 3 | No description available 
    3389 Y | No description available 
    3390 Z | No description available 
    3391 a | No description available 
    3392 b | No description available 
    3393 c | No description available 
    3394 e | No description available 
    3395 l | No description available 
    3396 v | No description available 
    3397  
    3398 
    3399 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj112-AP-PTC-
    3400 > coot-1.pdb id 22.2 name dE_J112_ap
    3401 
    3402 Summary of feedback from opening
    3403 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj112-AP-PTC-coot-1.pdb 
    3404 --- 
    3405 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    3406 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    3407 6 
    3408 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    3409 8 
    3410 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    3411 23 
    3412 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    3413 13 
    3414 135 messages similar to the above omitted 
    3415 End residue of secondary structure not found: HELIX 141 141 THR l 42 LYS l 58
    3416 1 17 
    3417 Start residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l
    3418 125 1 17 
    3419 Start residue of secondary structure not found: HELIX 143 143 ASN m 13 GLU m
    3420 32 1 20 
    3421 Start residue of secondary structure not found: HELIX 144 144 LEU m 38 ASP m
    3422 58 1 21 
    3423 Start residue of secondary structure not found: HELIX 145 145 SER m 59 ARG m
    3424 71 1 13 
    3425 Start residue of secondary structure not found: HELIX 146 146 ASP m 72 ALA m
    3426 88 1 17 
    3427 Start residue of secondary structure not found: HELIX 147 147 ASP n 2 GLY n 22
    3428 1 21 
    3429 178 messages similar to the above omitted 
    3430 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    3431 -1 N LEU l 102 O LEU l 33 
    3432 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    3433 0 
    3434 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    3435 -1 N LYS l 133 O SER l 30 
    3436 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    3437 0 
    3438 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    3439 115 -1 N ILE m 113 O ILE m 34 
    3440 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    3441 103 -1 N CYS m 100 O MET m 110 
    3442 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    3443 0 
    3444 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    3445 -1 N VAL n 39 O VAL n 49 
    3446 55 messages similar to the above omitted 
    3447 Cannot find LINK/SSBOND residue ZN (101 ) 
    3448 Cannot find LINK/SSBOND residue ZN (101 ) 
    3449 Cannot find LINK/SSBOND residue ZN (101 ) 
    3450 Cannot find LINK/SSBOND residue ZN (101 ) 
    3451  
    3452 Chain information for dE_J112_ap #7 
    3453 --- 
    3454 Chain | Description 
    3455 3 | No description available 
    3456 Y | No description available 
    3457 Z | No description available 
    3458 a | No description available 
    3459 b | No description available 
    3460 c | No description available 
    3461 e | No description available 
    3462 l | No description available 
    3463 v | No description available 
    3464  
    3465 
    3466 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj113-PE-PTC-
    3467 > coot-1.pdb id 22.3 name dE_J113_pe
    3468 
    3469 Summary of feedback from opening
    3470 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj113-PE-PTC-coot-1.pdb 
    3471 --- 
    3472 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    3473 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    3474 6 
    3475 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    3476 8 
    3477 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    3478 23 
    3479 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    3480 13 
    3481 135 messages similar to the above omitted 
    3482 End residue of secondary structure not found: HELIX 141 141 THR l 42 LYS l 58
    3483 1 17 
    3484 Start residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l
    3485 125 1 17 
    3486 Start residue of secondary structure not found: HELIX 143 143 ASN m 13 GLU m
    3487 32 1 20 
    3488 Start residue of secondary structure not found: HELIX 144 144 LEU m 38 ASP m
    3489 58 1 21 
    3490 Start residue of secondary structure not found: HELIX 145 145 SER m 59 ARG m
    3491 71 1 13 
    3492 Start residue of secondary structure not found: HELIX 146 146 ASP m 72 ALA m
    3493 88 1 17 
    3494 Start residue of secondary structure not found: HELIX 147 147 ASP n 2 GLY n 22
    3495 1 21 
    3496 178 messages similar to the above omitted 
    3497 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    3498 -1 N LEU l 102 O LEU l 33 
    3499 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    3500 0 
    3501 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    3502 -1 N LYS l 133 O SER l 30 
    3503 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    3504 0 
    3505 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    3506 115 -1 N ILE m 113 O ILE m 34 
    3507 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    3508 103 -1 N CYS m 100 O MET m 110 
    3509 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    3510 0 
    3511 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    3512 -1 N VAL n 39 O VAL n 49 
    3513 55 messages similar to the above omitted 
    3514 Cannot find LINK/SSBOND residue ZN (101 ) 
    3515 Cannot find LINK/SSBOND residue ZN (101 ) 
    3516 Cannot find LINK/SSBOND residue ZN (101 ) 
    3517 Cannot find LINK/SSBOND residue ZN (101 ) 
    3518  
    3519 Chain information for dE_J113_pe #7 
    3520 --- 
    3521 Chain | Description 
    3522 3 | No description available 
    3523 Z | No description available 
    3524 a | No description available 
    3525 b | No description available 
    3526 c | No description available 
    3527 e | No description available 
    3528 l | No description available 
    3529 v | No description available 
    3530  
    3531 
    3532 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj124-E-PTC-
    3533 > coot-1.pdb id 22.4 name dE_J124_e
    3534 
    3535 Summary of feedback from opening
    3536 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj124-E-PTC-coot-1.pdb 
    3537 --- 
    3538 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    3539 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    3540 6 
    3541 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    3542 8 
    3543 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    3544 23 
    3545 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    3546 13 
    3547 135 messages similar to the above omitted 
    3548 End residue of secondary structure not found: HELIX 141 141 THR l 42 LYS l 58
    3549 1 17 
    3550 Start residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l
    3551 125 1 17 
    3552 Start residue of secondary structure not found: HELIX 143 143 ASN m 13 GLU m
    3553 32 1 20 
    3554 Start residue of secondary structure not found: HELIX 144 144 LEU m 38 ASP m
    3555 58 1 21 
    3556 Start residue of secondary structure not found: HELIX 145 145 SER m 59 ARG m
    3557 71 1 13 
    3558 Start residue of secondary structure not found: HELIX 146 146 ASP m 72 ALA m
    3559 88 1 17 
    3560 Start residue of secondary structure not found: HELIX 147 147 ASP n 2 GLY n 22
    3561 1 21 
    3562 178 messages similar to the above omitted 
    3563 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    3564 -1 N LEU l 102 O LEU l 33 
    3565 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    3566 0 
    3567 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    3568 -1 N LYS l 133 O SER l 30 
    3569 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    3570 0 
    3571 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    3572 115 -1 N ILE m 113 O ILE m 34 
    3573 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    3574 103 -1 N CYS m 100 O MET m 110 
    3575 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    3576 0 
    3577 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    3578 -1 N VAL n 39 O VAL n 49 
    3579 55 messages similar to the above omitted 
    3580 Cannot find LINK/SSBOND residue ZN (101 ) 
    3581 Cannot find LINK/SSBOND residue ZN (101 ) 
    3582 Cannot find LINK/SSBOND residue ZN (101 ) 
    3583 Cannot find LINK/SSBOND residue ZN (101 ) 
    3584  
    3585 Chain information for dE_J124_e #7 
    3586 --- 
    3587 Chain | Description 
    3588 3 | No description available 
    3589 a | No description available 
    3590 b | No description available 
    3591 c | No description available 
    3592 e | No description available 
    3593 l | No description available 
    3594 v | No description available 
    3595  
    3596 
    3597 > rename #22 dE-models
    3598 
    3599 > hide #!*.* models
    3600 
    3601 > rename #20.1 dE_J111_ape
    3602 
    3603 > rename #20.2 dE_J112_ap
    3604 
    3605 > rename #20.3 dE_J113_pe
    3606 
    3607 > rename #20.4 dE_J124_e
    3608 
    3609 > rename #21.1 dE_J111_ape
    3610 
    3611 > rename #21.2 dE_J112_ap
    3612 
    3613 > rename #21.3 dE_J113_pe
    3614 
    3615 > rename #21.4 dE_J124_e
    3616 
    3617 > show #!2.1 models
    3618 
    3619 > hide #!2.1 models
    3620 
    3621 > show #!2.2 models
    3622 
    3623 > volume step 1
    3624 
    3625 > style stick
    3626 
    3627 Changed 866300 atom styles 
    3628 
    3629 > volume style mesh
    3630 
    3631 > hide #!2.2 models
    3632 
    3633 > show #!2.2 models
    3634 
    3635 > show #!6.1 models
    3636 
    3637 > hide #!6.1 models
    3638 
    3639 > show #!6.1 models
    3640 
    3641 > show #!6.2 models
    3642 
    3643 > hide #!6.2 models
    3644 
    3645 > show #!6.1 atoms
    3646 
    3647 > show #!1.1 models
    3648 
    3649 > hide #!1.1 models
    3650 
    3651 > show #!1.2 models
    3652 
    3653 > hide #!1.2 models
    3654 
    3655 > show #!1.2 models
    3656 
    3657 > hide #!1.2 models
    3658 
    3659 > show #!1.2 models
    3660 
    3661 > show #!1.5 models
    3662 
    3663 > show #!1.7 models
    3664 
    3665 > show #!1.9 models
    3666 
    3667 > show #!1.11 models
    3668 
    3669 > show #!4.1 models
    3670 
    3671 > show #!4.2 models
    3672 
    3673 > show #!4.3 models
    3674 
    3675 > show #!4.4 models
    3676 
    3677 > show #!4.5 models
    3678 
    3679 > hide #!4.4 models
    3680 
    3681 > hide #!4.3 models
    3682 
    3683 > hide #!4.2 models
    3684 
    3685 > hide #!4.1 models
    3686 
    3687 > hide #!4.5 models
    3688 
    3689 > show #!6.2 models
    3690 
    3691 > show #!6.3 models
    3692 
    3693 > show #!6.4 models
    3694 
    3695 > show #!6.5 models
    3696 
    3697 > show #!6.6 models
    3698 
    3699 > show #!6.7 models
    3700 
    3701 > show #!6.8 models
    3702 
    3703 > show #!6.9 models
    3704 
    3705 > show #!14.1 models
    3706 
    3707 > show #!14.2 models
    3708 
    3709 > show #!14.3 models
    3710 
    3711 > show #!14.4 models
    3712 
    3713 > show #!14.5 models
    3714 
    3715 > show #!14.6 models
    3716 
    3717 > show #!14.7 models
    3718 
    3719 > show #!14.8 models
    3720 
    3721 > show #!14.9 models
    3722 
    3723 > show #!14.10 models
    3724 
    3725 > show #!22.1 models
    3726 
    3727 > show #!22.2 models
    3728 
    3729 > show #!22.3 models
    3730 
    3731 > show #!22.4 models
    3732 
    3733 > show #!1.2,5,7,9,11#!6.1-9#!14.1-10#!22.1-4 atoms
    3734 
    3735 > hide #!22.3 models
    3736 
    3737 > hide #!22.2 models
    3738 
    3739 > hide #!22.1 models
    3740 
    3741 > show #!22.1 models
    3742 
    3743 > hide #!22.1 models
    3744 
    3745 > hide #!22.4 models
    3746 
    3747 > hide #!14.10 models
    3748 
    3749 > hide #!14.9 models
    3750 
    3751 > hide #!14.8 models
    3752 
    3753 > hide #!14.7 models
    3754 
    3755 > hide #!14.6 models
    3756 
    3757 > hide #!14.5 models
    3758 
    3759 > hide #!14.4 models
    3760 
    3761 > hide #!14.3 models
    3762 
    3763 > hide #!14.2 models
    3764 
    3765 > hide #!14.1 models
    3766 
    3767 > hide #!6.9 models
    3768 
    3769 > hide #!6.8 models
    3770 
    3771 > hide #!6.7 models
    3772 
    3773 > hide #!6.5 models
    3774 
    3775 > hide #!6.6 models
    3776 
    3777 > hide #!6.4 models
    3778 
    3779 > hide #!6.3 models
    3780 
    3781 > hide #!6.2 models
    3782 
    3783 > hide #!6.1 models
    3784 
    3785 > hide #!6 models
    3786 
    3787 > show #!6 models
    3788 
    3789 > hide #!1.2 models
    3790 
    3791 > hide #!1.5 models
    3792 
    3793 > hide #!1.7 models
    3794 
    3795 > hide #!1.9 models
    3796 
    3797 > hide #!1.11 models
    3798 
    3799 > hide #!2.2 models
    3800 
    3801 > show #!2.2 models
    3802 
    3803 > show #!6.1 models
    3804 
    3805 > hide #!6.1 models
    3806 
    3807 > show #!6.1 models
    3808 
    3809 > hide #!6.1 models
    3810 
    3811 > show #!6.1 models
    3812 
    3813 > show #!6.2 models
    3814 
    3815 > hide #!6.2 models
    3816 
    3817 > show #!6.2 models
    3818 
    3819 > hide #!6.2 models
    3820 
    3821 > show #!6.2 models
    3822 
    3823 > hide #6.1.2 models
    3824 
    3825 > hide #6.*.2
    3826 
    3827 > hide #!6.*.2 models
    3828 
    3829 > hide #!14.*.2 models
    3830 
    3831 > hide #!22.*.2 models
    3832 
    3833 > hide #6.1.1 models
    3834 
    3835 > show #6.1.1 models
    3836 
    3837 > hide #6.1.1 models
    3838 
    3839 > show #6.1.1 models
    3840 
    3841 > show #!1.2 models
    3842 
    3843 > hide #!1.2 models
    3844 
    3845 > show #!1.2 models
    3846 
    3847 > hide #!1.2 models
    3848 
    3849 > show #!1.2 models
    3850 
    3851 > hide #!1.2 models
    3852 
    3853 > show #!1.2 models
    3854 
    3855 > hide #!1.2 models
    3856 
    3857 > show #!1.2 models
    3858 
    3859 > hide #!1.2 models
    3860 
    3861 > show #!1.2 models
    3862 
    3863 > color #1.2 #d7d7d7ff
    3864 
    3865 > color #1.2 #acacacff
    3866 
    3867 > color #1.2 #9f9f9fff
    3868 
    3869 > color #1.2 #8d8d8dff
    3870 
    3871 > color #1.2 #949494ff
    3872 
    3873 > color #1.2 grey
    3874 
    3875 > ui mousemode right clip
    3876 
    3877 > show #!3.2 models
    3878 
    3879 > hide #!2.2 models
    3880 
    3881 > hide #!1.2#!6.1-2 atoms
    3882 
    3883 > show #!1.2#!6.1-2 cartoons
    3884 
    3885 > nucrib
    3886 
    3887 Unknown command: nucrib 
    3888 
    3889 > cartoon style nucleic xsection oval width 1.6 thickness 1.6
    3890 
    3891 > nucleotides stubs
    3892 
    3893 [Repeated 1 time(s)]
    3894 
    3895 > show #!1.2#!6.1-2 atoms
    3896 
    3897 [Repeated 1 time(s)]
    3898 
    3899 > nucleotides slab
    3900 
    3901 > hide #!1.2 models
    3902 
    3903 > hide #!6.2 models
    3904 
    3905 > cartoon style protein modeHelix tube radius 2 sides 24
    3906 
    3907 > hide #!6.1 cartoons
    3908 
    3909 > show #!6.1 cartoons
    3910 
    3911 > nucleotides fill
    3912 
    3913 > preset ribbon
    3914 
    3915 Using preset: Cartoons/Nucleotides / Ribbons/Slabs 
    3916 Changed 0 atom styles 
    3917 Preset expands to these ChimeraX commands:
    3918 
    3919    
    3920    
    3921     show nucleic
    3922     hide protein|solvent|H
    3923     surf hide
    3924     style (protein|nucleic|solvent) & @@draw_mode=0 stick
    3925     cartoon
    3926     cartoon style modeh def arrows t arrowshelix f arrowscale 2 wid 2 thick 0.4 sides 12 div 20
    3927     cartoon style ~(nucleic|strand) x round
    3928     cartoon style (nucleic|strand) x rect
    3929     nucleotides tube/slab shape box
    3930 
    3931  
    3932 
    3933 > cartoon tether
    3934 
    3935 7k00 #1.2 
    3936 \- scales 1.0 
    3937 \- shapes cone 
    3938 \- sides 4 
    3939 \- opacity 0.5 
    3940 8b0x #1.5 
    3941 \- scales 1.0 
    3942 \- shapes cone 
    3943 \- sides 4 
    3944 \- opacity 0.5 
    3945 8cgk #1.7 
    3946 \- scales 1.0 
    3947 \- shapes cone 
    3948 \- sides 4 
    3949 \- opacity 0.5 
    3950 7bv8 #1.9 
    3951 \- scales 1.0 
    3952 \- shapes cone 
    3953 \- sides 4 
    3954 \- opacity 0.5 
    3955 7o1a #1.11 
    3956 \- scales 1.0 
    3957 \- shapes cone 
    3958 \- sides 4 
    3959 \- opacity 0.5 
    3960 d9_J83_cl0 #6.10 
    3961 \- scales 1.0 
    3962 \- shapes cone 
    3963 \- sides 4 
    3964 \- opacity 0.5 
    3965 d9_J84_cl1 #6.1 
    3966 \- scales 1.0 
    3967 \- shapes cone 
    3968 \- sides 4 
    3969 \- opacity 0.5 
    3970 d9_J85_cl2 #6.2 
    3971 \- scales 1.0 
    3972 \- shapes cone 
    3973 \- sides 4 
    3974 \- opacity 0.5 
    3975 d9_J86_cl3 #6.3 
    3976 \- scales 1.0 
    3977 \- shapes cone 
    3978 \- sides 4 
    3979 \- opacity 0.5 
    3980 d9_J87_cl4 #6.4 
    3981 \- scales 1.0 
    3982 \- shapes cone 
    3983 \- sides 4 
    3984 \- opacity 0.5 
    3985 d9_J88_cl5 #6.5 
    3986 \- scales 1.0 
    3987 \- shapes cone 
    3988 \- sides 4 
    3989 \- opacity 0.5 
    3990 d9_J89_cl6 #6.6 
    3991 \- scales 1.0 
    3992 \- shapes cone 
    3993 \- sides 4 
    3994 \- opacity 0.5 
    3995 d9_J90_cl7 #6.7 
    3996 \- scales 1.0 
    3997 \- shapes cone 
    3998 \- sides 4 
    3999 \- opacity 0.5 
    4000 d9_J91_cl8 #6.8 
    4001 \- scales 1.0 
    4002 \- shapes cone 
    4003 \- sides 4 
    4004 \- opacity 0.5 
    4005 d9_J92_cl9 #6.9 
    4006 \- scales 1.0 
    4007 \- shapes cone 
    4008 \- sides 4 
    4009 \- opacity 0.5 
    4010 d10_J53_c0 #14.10 
    4011 \- scales 1.0 
    4012 \- shapes cone 
    4013 \- sides 4 
    4014 \- opacity 0.5 
    4015 d10_J54_c1 #14.1 
    4016 \- scales 1.0 
    4017 \- shapes cone 
    4018 \- sides 4 
    4019 \- opacity 0.5 
    4020 d10_J55_c2 #14.2 
    4021 \- scales 1.0 
    4022 \- shapes cone 
    4023 \- sides 4 
    4024 \- opacity 0.5 
    4025 d10_J56_c3 #14.3 
    4026 \- scales 1.0 
    4027 \- shapes cone 
    4028 \- sides 4 
    4029 \- opacity 0.5 
    4030 d10_J57_c4 #14.4 
    4031 \- scales 1.0 
    4032 \- shapes cone 
    4033 \- sides 4 
    4034 \- opacity 0.5 
    4035 d10_J58_c5 #14.5 
    4036 \- scales 1.0 
    4037 \- shapes cone 
    4038 \- sides 4 
    4039 \- opacity 0.5 
    4040 d10_J59_c6 #14.6 
    4041 \- scales 1.0 
    4042 \- shapes cone 
    4043 \- sides 4 
    4044 \- opacity 0.5 
    4045 d10_J60_c7 #14.7 
    4046 \- scales 1.0 
    4047 \- shapes cone 
    4048 \- sides 4 
    4049 \- opacity 0.5 
    4050 d10_J61_c8 #14.8 
    4051 \- scales 1.0 
    4052 \- shapes cone 
    4053 \- sides 4 
    4054 \- opacity 0.5 
    4055 d10_J62_c9 #14.9 
    4056 \- scales 1.0 
    4057 \- shapes cone 
    4058 \- sides 4 
    4059 \- opacity 0.5 
    4060 dE_J111_ape #22.1 
    4061 \- scales 1.0 
    4062 \- shapes cone 
    4063 \- sides 4 
    4064 \- opacity 0.5 
    4065 dE_J112_ap #22.2 
    4066 \- scales 1.0 
    4067 \- shapes cone 
    4068 \- sides 4 
    4069 \- opacity 0.5 
    4070 dE_J113_pe #22.3 
    4071 \- scales 1.0 
    4072 \- shapes cone 
    4073 \- sides 4 
    4074 \- opacity 0.5 
    4075 dE_J124_e #22.4 
    4076 \- scales 1.0 
    4077 \- shapes cone 
    4078 \- sides 4 
    4079 \- opacity 0.5 
    4080 
    4081 > cartoon tether
    4082 
    4083 7k00 #1.2 
    4084 \- scales 1.0 
    4085 \- shapes cone 
    4086 \- sides 4 
    4087 \- opacity 0.5 
    4088 8b0x #1.5 
    4089 \- scales 1.0 
    4090 \- shapes cone 
    4091 \- sides 4 
    4092 \- opacity 0.5 
    4093 8cgk #1.7 
    4094 \- scales 1.0 
    4095 \- shapes cone 
    4096 \- sides 4 
    4097 \- opacity 0.5 
    4098 7bv8 #1.9 
    4099 \- scales 1.0 
    4100 \- shapes cone 
    4101 \- sides 4 
    4102 \- opacity 0.5 
    4103 7o1a #1.11 
    4104 \- scales 1.0 
    4105 \- shapes cone 
    4106 \- sides 4 
    4107 \- opacity 0.5 
    4108 d9_J83_cl0 #6.10 
    4109 \- scales 1.0 
    4110 \- shapes cone 
    4111 \- sides 4 
    4112 \- opacity 0.5 
    4113 d9_J84_cl1 #6.1 
    4114 \- scales 1.0 
    4115 \- shapes cone 
    4116 \- sides 4 
    4117 \- opacity 0.5 
    4118 d9_J85_cl2 #6.2 
    4119 \- scales 1.0 
    4120 \- shapes cone 
    4121 \- sides 4 
    4122 \- opacity 0.5 
    4123 d9_J86_cl3 #6.3 
    4124 \- scales 1.0 
    4125 \- shapes cone 
    4126 \- sides 4 
    4127 \- opacity 0.5 
    4128 d9_J87_cl4 #6.4 
    4129 \- scales 1.0 
    4130 \- shapes cone 
    4131 \- sides 4 
    4132 \- opacity 0.5 
    4133 d9_J88_cl5 #6.5 
    4134 \- scales 1.0 
    4135 \- shapes cone 
    4136 \- sides 4 
    4137 \- opacity 0.5 
    4138 d9_J89_cl6 #6.6 
    4139 \- scales 1.0 
    4140 \- shapes cone 
    4141 \- sides 4 
    4142 \- opacity 0.5 
    4143 d9_J90_cl7 #6.7 
    4144 \- scales 1.0 
    4145 \- shapes cone 
    4146 \- sides 4 
    4147 \- opacity 0.5 
    4148 d9_J91_cl8 #6.8 
    4149 \- scales 1.0 
    4150 \- shapes cone 
    4151 \- sides 4 
    4152 \- opacity 0.5 
    4153 d9_J92_cl9 #6.9 
    4154 \- scales 1.0 
    4155 \- shapes cone 
    4156 \- sides 4 
    4157 \- opacity 0.5 
    4158 d10_J53_c0 #14.10 
    4159 \- scales 1.0 
    4160 \- shapes cone 
    4161 \- sides 4 
    4162 \- opacity 0.5 
    4163 d10_J54_c1 #14.1 
    4164 \- scales 1.0 
    4165 \- shapes cone 
    4166 \- sides 4 
    4167 \- opacity 0.5 
    4168 d10_J55_c2 #14.2 
    4169 \- scales 1.0 
    4170 \- shapes cone 
    4171 \- sides 4 
    4172 \- opacity 0.5 
    4173 d10_J56_c3 #14.3 
    4174 \- scales 1.0 
    4175 \- shapes cone 
    4176 \- sides 4 
    4177 \- opacity 0.5 
    4178 d10_J57_c4 #14.4 
    4179 \- scales 1.0 
    4180 \- shapes cone 
    4181 \- sides 4 
    4182 \- opacity 0.5 
    4183 d10_J58_c5 #14.5 
    4184 \- scales 1.0 
    4185 \- shapes cone 
    4186 \- sides 4 
    4187 \- opacity 0.5 
    4188 d10_J59_c6 #14.6 
    4189 \- scales 1.0 
    4190 \- shapes cone 
    4191 \- sides 4 
    4192 \- opacity 0.5 
    4193 d10_J60_c7 #14.7 
    4194 \- scales 1.0 
    4195 \- shapes cone 
    4196 \- sides 4 
    4197 \- opacity 0.5 
    4198 d10_J61_c8 #14.8 
    4199 \- scales 1.0 
    4200 \- shapes cone 
    4201 \- sides 4 
    4202 \- opacity 0.5 
    4203 d10_J62_c9 #14.9 
    4204 \- scales 1.0 
    4205 \- shapes cone 
    4206 \- sides 4 
    4207 \- opacity 0.5 
    4208 dE_J111_ape #22.1 
    4209 \- scales 1.0 
    4210 \- shapes cone 
    4211 \- sides 4 
    4212 \- opacity 0.5 
    4213 dE_J112_ap #22.2 
    4214 \- scales 1.0 
    4215 \- shapes cone 
    4216 \- sides 4 
    4217 \- opacity 0.5 
    4218 dE_J113_pe #22.3 
    4219 \- scales 1.0 
    4220 \- shapes cone 
    4221 \- sides 4 
    4222 \- opacity 0.5 
    4223 dE_J124_e #22.4 
    4224 \- scales 1.0 
    4225 \- shapes cone 
    4226 \- sides 4 
    4227 \- opacity 0.5 
    4228 
    4229 > preset cartoons/nucleotides ribbons/slabs
    4230 
    4231 Using preset: Cartoons/Nucleotides / Ribbons/Slabs 
    4232 Changed 0 atom styles 
    4233 Preset expands to these ChimeraX commands:
    4234 
    4235    
    4236    
    4237     show nucleic
    4238     hide protein|solvent|H
    4239     surf hide
    4240     style (protein|nucleic|solvent) & @@draw_mode=0 stick
    4241     cartoon
    4242     cartoon style modeh def arrows t arrowshelix f arrowscale 2 wid 2 thick 0.4 sides 12 div 20
    4243     cartoon style ~(nucleic|strand) x round
    4244     cartoon style (nucleic|strand) x rect
    4245     nucleotides tube/slab shape box
    4246 
    4247  
    4248 
    4249 > graphics silhouettes true
    4250 
    4251 > graphics silhouettes false
    4252 
    4253 > graphics silhouettes true
    4254 
    4255 > graphics silhouettes false
    4256 
    4257 > graphics silhouettes true
    4258 
    4259 > graphics silhouettes false
    4260 
    4261 > graphics silhouettes true
    4262 
    4263 > graphics silhouettes false
    4264 
    4265 > graphics silhouettes true
    4266 
    4267 > volume #3.2 style surface
    4268 
    4269 > volume #3.2 style mesh
    4270 
    4271 > graphics silhouettes false
    4272 
    4273 > lighting shadows true
    4274 
    4275 > lighting shadows false
    4276 
    4277 > lighting shadows true
    4278 
    4279 > lighting shadows false
    4280 
    4281 > lighting flat
    4282 
    4283 > lighting full
    4284 
    4285 > lighting soft
    4286 
    4287 > lighting simple
    4288 
    4289 > graphics silhouettes false
    4290 
    4291 > lighting soft
    4292 
    4293 > lighting simple
    4294 
    4295 [Repeated 1 time(s)]
    4296 
    4297 > hide #!3.2 models
    4298 
    4299 > show #!2.2 models
    4300 
    4301 > show #!6.2 models
    4302 
    4303 > hide #!6.1 models
    4304 
    4305 > show #!6.3 models
    4306 
    4307 > hide #!6.2 models
    4308 
    4309 > show #!6.4 models
    4310 
    4311 > hide #!6.3 models
    4312 
    4313 > show #!6.5 models
    4314 
    4315 > hide #!6.4 models
    4316 
    4317 > show #!6.6 models
    4318 
    4319 > hide #!6.5 models
    4320 
    4321 > show #!6.7 models
    4322 
    4323 > hide #!6.6 models
    4324 
    4325 > show #!6.8 models
    4326 
    4327 > hide #!6.7 models
    4328 
    4329 > show #!6.9 models
    4330 
    4331 > hide #!6.8 models
    4332 
    4333 > show #!6.10 models
    4334 
    4335 > hide #!6.9 models
    4336 
    4337 > hide #!6.10 models
    4338 
    4339 > show #!6.1 models
    4340 
    4341 > nucleotides #!6.1 fill
    4342 
    4343 > style nucleic & #!6.1 stick
    4344 
    4345 Changed 9184 atom styles 
    4346 
    4347 > nucleotides #!6.1 fill
    4348 
    4349 > style nucleic & #!6.1 stick
    4350 
    4351 Changed 9184 atom styles 
    4352 
    4353 > nucleotides #!6.1 atoms
    4354 
    4355 > style nucleic & #!6.1 stick
    4356 
    4357 Changed 9184 atom styles 
    4358 
    4359 > nucleotides #!6.1 tube/slab shape box
    4360 
    4361 [Repeated 1 time(s)]
    4362 
    4363 > nucleotides #!6.1 ladder
    4364 
    4365 > nucleotides #!6.1 fill
    4366 
    4367 > style nucleic & #!6.1 stick
    4368 
    4369 Changed 9184 atom styles 
    4370 
    4371 > hide #!6.1 cartoons
    4372 
    4373 > view #6.10/A:2581
    4374 
    4375 No objects specified. 
    4376 
    4377 > zoom #6.10/A:2581
    4378 
    4379 Expected a number > 0 or a keyword 
    4380 
    4381 > zoom #6.10/a:2581
    4382 
    4383 Expected a number > 0 or a keyword 
    4384 
    4385 > zoom #6.10/a
    4386 
    4387 Expected a number > 0 or a keyword 
    4388 
    4389 > view #6.10/a:2581
    4390 
    4391 No displayed objects specified. 
    4392 
    4393 > show #!6.10 models
    4394 
    4395 > view #6.10/a:2581
    4396 
    4397 > nucleotides #!6.1,10 fill
    4398 
    4399 > style nucleic & #!6.1,10 stick
    4400 
    4401 Changed 17492 atom styles 
    4402 
    4403 > hide #!6.1,10 cartoons
    4404 
    4405 > show #!6.1,10 cartoons
    4406 
    4407 [Repeated 1 time(s)]
    4408 
    4409 > cartoon suppressBackboneDisplay false
    4410 
    4411 > show #!14.8 models
    4412 
    4413 > hide #!14.8 models
    4414 
    4415 > show #!14.8 models
    4416 
    4417 > hide #!14.8 models
    4418 
    4419 > show #!6.2 models
    4420 
    4421 > show #!6.3 models
    4422 
    4423 > show #!6.4 models
    4424 
    4425 > show #!6.5 models
    4426 
    4427 > show #!6.6 models
    4428 
    4429 > show #!6.7 models
    4430 
    4431 > show #!6.8 models
    4432 
    4433 > show #!6.9 models
    4434 
    4435 > nucleotides fill
    4436 
    4437 > show #!14.10 models
    4438 
    4439 > hide #!14.10 models
    4440 
    4441 > show #!14.10 models
    4442 
    4443 > hide #!6 models
    4444 
    4445 > show #!6 models
    4446 
    4447 > hide #!6 models
    4448 
    4449 > show #!6 models
    4450 
    4451 > hide #!14.10 models
    4452 
    4453 > hide #!6.10 models
    4454 
    4455 > hide #!6.9 models
    4456 
    4457 > hide #!6.8 models
    4458 
    4459 > hide #!6.7 models
    4460 
    4461 > hide #!6.6 models
    4462 
    4463 > hide #!6.5 models
    4464 
    4465 > hide #!6.4 models
    4466 
    4467 > hide #!6.3 models
    4468 
    4469 > hide #!6.2 models
    4470 
    4471 > show #!1.1 models
    4472 
    4473 > show #!1.2 models
    4474 
    4475 > hide #!1.2 models
    4476 
    4477 > show #!1.2 models
    4478 
    4479 > hide #!1.2 models
    4480 
    4481 > show #!1.2 models
    4482 
    4483 > hide #!6.1 models
    4484 
    4485 > show #!6.1 models
    4486 
    4487 > hide #!1.2 models
    4488 
    4489 > show #!6.2 models
    4490 
    4491 > hide #!6.2 models
    4492 
    4493 > show #!6.2 models
    4494 
    4495 > hide #!6.2 models
    4496 
    4497 > show #!6.2 models
    4498 
    4499 > hide #!6.2 models
    4500 
    4501 > color #6.1/Y blue
    4502 
    4503 > color #6.*/Y red
    4504 
    4505 > show #!6.2 models
    4506 
    4507 > hide #!6.1 models
    4508 
    4509 > hide #!6.2 models
    4510 
    4511 > show #!6.1 models
    4512 
    4513 > show #!6.2 models
    4514 
    4515 > show #!14.1 models
    4516 
    4517 > hide #!6.2 models
    4518 
    4519 > hide #!6.1 models
    4520 
    4521 > show #!14.2 models
    4522 
    4523 > hide #!14.2 models
    4524 
    4525 > show #!14.2 models
    4526 
    4527 > show #!14.3 models
    4528 
    4529 > show #!14.4 models
    4530 
    4531 > show #!14.6 models
    4532 
    4533 > show #!14.5 models
    4534 
    4535 > show #!14.7 models
    4536 
    4537 > show #!14.8 models
    4538 
    4539 > show #!14.9 models
    4540 
    4541 > show #!14.10 models
    4542 
    4543 > hide #!14.10 models
    4544 
    4545 > hide #!14.9 models
    4546 
    4547 > hide #!14.8 models
    4548 
    4549 > hide #!14.7 models
    4550 
    4551 > hide #!14.6 models
    4552 
    4553 > hide #!14.5 models
    4554 
    4555 > hide #!14.4 models
    4556 
    4557 > hide #!14.3 models
    4558 
    4559 > hide #!14.2 models
    4560 
    4561 > hide #!14.1 models
    4562 
    4563 > hide #!1.1 models
    4564 
    4565 > show #!1.1 models
    4566 
    4567 > hide #!1.1 models
    4568 
    4569 > show #!1.1 models
    4570 
    4571 > hide #!1.1 models
    4572 
    4573 > show #!1.1 models
    4574 
    4575 > hide #!1.1 models
    4576 
    4577 > show #!1.1 models
    4578 
    4579 > hide #!1.1 models
    4580 
    4581 > show #!1.1 models
    4582 
    4583 > hide #!1.1 models
    4584 
    4585 > show #!1.1 models
    4586 
    4587 > hide #!1.1 models
    4588 
    4589 > show #!1.1 models
    4590 
    4591 > hide #!1.1 models
    4592 
    4593 > show #!1.1 models
    4594 
    4595 > hide #!1.1 models
    4596 
    4597 > show #!1.1 models
    4598 
    4599 > hide #!1.1 models
    4600 
    4601 > show #!1.1 models
    4602 
    4603 > hide #!1.1 models
    4604 
    4605 > show #!1.1 models
    4606 
    4607 > hide #!1.1 models
    4608 
    4609 > show #!1.1 models
    4610 
    4611 > hide #!1.1 models
    4612 
    4613 > show #!1.1 models
    4614 
    4615 > hide #!2.2 models
    4616 
    4617 > show #!2.2 models
    4618 
    4619 > hide #!2.2 models
    4620 
    4621 > show #!2.2 models
    4622 
    4623 > hide #!2.2 models
    4624 
    4625 > show #!2.2 models
    4626 
    4627 > hide #!2.2 models
    4628 
    4629 > show #!2.2 models
    4630 
    4631 > hide #!2.2 models
    4632 
    4633 > show #!2.2 models
    4634 
    4635 > hide #!2.2 models
    4636 
    4637 > show #!2.2 models
    4638 
    4639 > hide #!2.2 models
    4640 
    4641 > show #!2.2 models
    4642 
    4643 > show #!6.1 models
    4644 
    4645 > hide #!6.1 models
    4646 
    4647 > show #!6.1 models
    4648 
    4649 > hide #!6.1 models
    4650 
    4651 > show #!6.1 models
    4652 
    4653 > hide #!6.1 models
    4654 
    4655 > show #!6.1 models
    4656 
    4657 > hide #!1.1 models
    4658 
    4659 > hide #!2.2 models
    4660 
    4661 > show #!2.2 models
    4662 
    4663 > hide #!2.2 models
    4664 
    4665 > show #!4.1 models
    4666 
    4667 > hide #!4.1 models
    4668 
    4669 > show #!4.1 models
    4670 
    4671 > show #!1.2 models
    4672 
    4673 > hide #!1.2 models
    4674 
    4675 > show #!1.2 models
    4676 
    4677 > hide #!1.2 models
    4678 
    4679 > show #!1.2 models
    4680 
    4681 > hide #!1.2 models
    4682 
    4683 > show #!1.2 models
    4684 
    4685 > show #!1.2#!6.1 atoms
    4686 
    4687 > open
    4688 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9j216-coot-75-noPTC-
    4689 > noHOH.pdb id 1.12 name d9coot75noPTC
    4690 
    4691 Summary of feedback from opening
    4692 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9j216-coot-75-noPTC-
    4693 noHOH.pdb 
    4694 --- 
    4695 warnings | End residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l 125 1 17 
    4696 Start residue of secondary structure not found: SHEET 1 49 2 GLY l 37 ARG l 40
    4697 0 
    4698 Start residue of secondary structure not found: SHEET 2 49 2 LEU l 95 PRO l 98
    4699 -1 
    4700 End residue of secondary structure not found: SHEET 3 50 4 SER l 30 VAL l 36
    4701 -1 N LEU l 33 O TYR l 103 
    4702 Start residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l
    4703 102 -1 N LEU l 102 O LEU l 33 
    4704 End residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36 0 
    4705 Start residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l
    4706 133 -1 N LYS l 133 O SER l 30 
    4707 Cannot find LINK/SSBOND residue A (1784 ) 
    4708 Cannot find LINK/SSBOND residue K (3123 ) 
    4709 Cannot find LINK/SSBOND residue K (3129 ) 
    4710 Cannot find LINK/SSBOND residue MG (3197 ) 
    4711 Cannot find LINK/SSBOND residue MG (3220 ) 
    4712 6 messages similar to the above omitted 
    4713  
    4714 Chain information for d9coot75noPTC #7 
    4715 --- 
    4716 Chain | Description 
    4717 0 | No description available 
    4718 1 | No description available 
    4719 2 | No description available 
    4720 3 | No description available 
    4721 4 | No description available 
    4722 5 | No description available 
    4723 A | No description available 
    4724 A | No description available 
    4725 B | No description available 
    4726 C | No description available 
    4727 D | No description available 
    4728 E | No description available 
    4729 F | No description available 
    4730 G | No description available 
    4731 H | No description available 
    4732 I | No description available 
    4733 J | No description available 
    4734 K | No description available 
    4735 L | No description available 
    4736 M | No description available 
    4737 N | No description available 
    4738 O | No description available 
    4739 P | No description available 
    4740 Q | No description available 
    4741 R | No description available 
    4742 S | No description available 
    4743 T | No description available 
    4744 U | No description available 
    4745 X | No description available 
    4746 Y | No description available 
    4747 Z | No description available 
    4748 a | No description available 
    4749 b | No description available 
    4750 c | No description available 
    4751 d | No description available 
    4752 e | No description available 
    4753 f | No description available 
    4754 g | No description available 
    4755 h | No description available 
    4756 i | No description available 
    4757 j | No description available 
    4758 k | No description available 
    4759 l | No description available 
    4760 m | No description available 
    4761 n | No description available 
    4762 o | No description available 
    4763 p | No description available 
    4764 q | No description available 
    4765 r | No description available 
    4766 s | No description available 
    4767 t | No description available 
    4768 u | No description available 
    4769 v | No description available 
    4770 w | No description available 
    4771 x | No description available 
    4772 y | No description available 
    4773 z | No description available 
    4774  
    4775 
    4776 > style #!1.2,12#!6.1 stick
    4777 
    4778 Changed 297009 atom styles 
    4779 
    4780 > hide #!1.2 models
    4781 
    4782 > color #1.12 pint
    4783 
    4784 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    4785 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    4786 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    4787 
    4788 > color #1.12 pink
    4789 
    4790 > color #1.12 plum
    4791 
    4792 > hide #!1.12#!6.1 cartoons
    4793 
    4794 > show #!1.12#!6.1 cartoons
    4795 
    4796 > color #1.12 gray
    4797 
    4798 > show #!14.10 models
    4799 
    4800 > hide #!14.10 models
    4801 
    4802 > show #!14.10 models
    4803 
    4804 > hide #!14.10 models
    4805 
    4806 > show #!14.9 models
    4807 
    4808 > hide #!14.9 models
    4809 
    4810 > show #!14.9 models
    4811 
    4812 > hide #!14.9 models
    4813 
    4814 > show #!14.9 models
    4815 
    4816 > hide #!14.9 models
    4817 
    4818 > show #!14.9 models
    4819 
    4820 > hide #!14.9 models
    4821 
    4822 > show #!14.9 models
    4823 
    4824 > hide #!14.9 models
    4825 
    4826 > show #!14.9 models
    4827 
    4828 > hide #!14.9 models
    4829 
    4830 > color #6.*/Y light sky blue
    4831 
    4832 > show #!14.10 models
    4833 
    4834 > hide #!14.10 models
    4835 
    4836 > show #!14.10 models
    4837 
    4838 > hide #!14.10 models
    4839 
    4840 > show #!14.9 models
    4841 
    4842 > hide #!14.9 models
    4843 
    4844 > show #!14.9 models
    4845 
    4846 > hide #!14.9 models
    4847 
    4848 > show #!14.9 models
    4849 
    4850 > hide #!14.9 models
    4851 
    4852 > color #6.*/Y indigo
    4853 
    4854 > color #6.*/Z blue
    4855 
    4856 > show #!5.1 models
    4857 
    4858 > hide #!4.1 models
    4859 
    4860 > nucleotides #!1.12#!6.1 fill
    4861 
    4862 > style nucleic & #!1.12#!6.1 stick
    4863 
    4864 Changed 101052 atom styles 
    4865 
    4866 > nucleotides plain
    4867 
    4868 Missing or invalid "representation" argument: Should be one of 'atoms',
    4869 'fill', 'ladder', 'slab', 'stubs', or 'tube/slab' 
    4870 
    4871 > nucleotides atoms
    4872 
    4873 > nucleotides fill
    4874 
    4875 > cartoon teather
    4876 
    4877 Expected an atoms specifier or a keyword 
    4878 
    4879 > cartoon tether cylinder
    4880 
    4881 Expected an atomic structures specifier or a keyword 
    4882 
    4883 > cartoon tether cone
    4884 
    4885 Expected an atomic structures specifier or a keyword 
    4886 
    4887 > hide #!1.12#!6.1 cartoons
    4888 
    4889 > show #!1.12#!6.1 cartoons
    4890 
    4891 [Repeated 1 time(s)]
    4892 
    4893 > hide #!1.12#!6.1 cartoons
    4894 
    4895 > show #!1.12#!6.1 cartoons
    4896 
    4897 > hide #!1.12#!6.1 cartoons
    4898 
    4899 > cartoon tether opacity 0
    4900 
    4901 > show #!1.12#!6.1 atoms
    4902 
    4903 > show #!1.12#!6.1 cartoons
    4904 
    4905 > view
    4906 
    4907 > view #6.1/Y:76
    4908 
    4909 > view matrix
    4910 
    4911 view matrix camera
    4912 0.69679,0.46022,0.55016,165.99,-0.5672,-0.11597,0.81538,226.04,0.43906,-0.8802,0.18023,147.13 
    4913 view matrix models
    4914 #1,1,0,0,0,0,1,0,0,0,0,1,0,#1.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.2,1,0,0,0,0,1,0,0,0,0,1,0,#1.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.3,1,0,0,0,0,1,0,0,0,0,1,0,#1.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.5,1,0,0,0,0,1,0,0,0,0,1,0,#1.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.6,1,0,0,0,0,1,0,0,0,0,1,0,#1.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.7,1,0,0,0,0,1,0,0,0,0,1,0,#1.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.8,1,0,0,0,0,1,0,0,0,0,1,0,#1.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.9,1,0,0,0,0,1,0,0,0,0,1,0,#1.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.10,1,0,0,0,0,1,0,0,0,0,1,0,#1.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.11,1,0,0,0,0,1,0,0,0,0,1,0,#1.11.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.12,1,0,0,0,0,1,0,0,0,0,1,0,#1.12.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.12.2,1,0,0,0,0,1,0,0,0,0,1,0,#2,1,0,0,0,0,1,0,0,0,0,1,0,#2.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.2,1,0,0,0,0,1,0,0,0,0,1,0,#2.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.3,1,0,0,0,0,1,0,0,0,0,1,0,#2.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.4,1,0,0,0,0,1,0,0,0,0,1,0,#2.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.5,1,0,0,0,0,1,0,0,0,0,1,0,#2.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.6,1,0,0,0,0,1,0,0,0,0,1,0,#2.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#3,1,0,0,0,0,1,0,0,0,0,1,0,#3.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.2,1,0,0,0,0,1,0,0,0,0,1,0,#3.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.3,1,0,0,0,0,1,0,0,0,0,1,0,#3.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.4,1,0,0,0,0,1,0,0,0,0,1,0,#3.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.5,1,0,0,0,0,1,0,0,0,0,1,0,#3.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.6,1,0,0,0,0,1,0,0,0,0,1,0,#3.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#4,1,0,0,0,0,1,0,0,0,0,1,0,#4.10,1,0,0,0,0,1,0,0,0,0,1,0,#4.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.2,1,0,0,0,0,1,0,0,0,0,1,0,#4.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.3,1,0,0,0,0,1,0,0,0,0,1,0,#4.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.4,1,0,0,0,0,1,0,0,0,0,1,0,#4.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.5,1,0,0,0,0,1,0,0,0,0,1,0,#4.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.6,1,0,0,0,0,1,0,0,0,0,1,0,#4.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.7,1,0,0,0,0,1,0,0,0,0,1,0,#4.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.8,1,0,0,0,0,1,0,0,0,0,1,0,#4.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.9,1,0,0,0,0,1,0,0,0,0,1,0,#4.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#5,1,0,0,0,0,1,0,0,0,0,1,0,#5.10,1,0,0,0,0,1,0,0,0,0,1,0,#5.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.2,1,0,0,0,0,1,0,0,0,0,1,0,#5.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.3,1,0,0,0,0,1,0,0,0,0,1,0,#5.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.4,1,0,0,0,0,1,0,0,0,0,1,0,#5.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.5,1,0,0,0,0,1,0,0,0,0,1,0,#5.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.6,1,0,0,0,0,1,0,0,0,0,1,0,#5.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.7,1,0,0,0,0,1,0,0,0,0,1,0,#5.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.8,1,0,0,0,0,1,0,0,0,0,1,0,#5.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.9,1,0,0,0,0,1,0,0,0,0,1,0,#5.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#6,1,0,0,0,0,1,0,0,0,0,1,0,#6.10,1,0,0,0,0,1,0,0,0,0,1,0,#6.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.3,1,0,0,0,0,1,0,0,0,0,1,0,#6.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.4,1,0,0,0,0,1,0,0,0,0,1,0,#6.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.5,1,0,0,0,0,1,0,0,0,0,1,0,#6.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.6,1,0,0,0,0,1,0,0,0,0,1,0,#6.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.7,1,0,0,0,0,1,0,0,0,0,1,0,#6.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.8,1,0,0,0,0,1,0,0,0,0,1,0,#6.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.9,1,0,0,0,0,1,0,0,0,0,1,0,#6.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#10,1,0,0,0,0,1,0,0,0,0,1,0,#10.1,1,0,0,0,0,1,0,0,0,0,1,0,#10.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#10.2,1,0,0,0,0,1,0,0,0,0,1,0,#10.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#10.3,1,0,0,0,0,1,0,0,0,0,1,0,#10.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#11,1,0,0,0,0,1,0,0,0,0,1,0,#11.1,1,0,0,0,0,1,0,0,0,0,1,0,#11.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#11.2,1,0,0,0,0,1,0,0,0,0,1,0,#11.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#11.3,1,0,0,0,0,1,0,0,0,0,1,0,#11.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#12,1,0,0,0,0,1,0,0,0,0,1,0,#12.10,1,0,0,0,0,1,0,0,0,0,1,0,#12.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.2,1,0,0,0,0,1,0,0,0,0,1,0,#12.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.3,1,0,0,0,0,1,0,0,0,0,1,0,#12.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.4,1,0,0,0,0,1,0,0,0,0,1,0,#12.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.5,1,0,0,0,0,1,0,0,0,0,1,0,#12.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.6,1,0,0,0,0,1,0,0,0,0,1,0,#12.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.7,1,0,0,0,0,1,0,0,0,0,1,0,#12.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.8,1,0,0,0,0,1,0,0,0,0,1,0,#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0 
    4915  
    4916 
    4917 > volume #5.1 level 1.028
    4918 
    4919 > volume #5.1 level 1
    4920 
    4921 > hide #!5.1 models
    4922 
    4923 > show #!4.1 models
    4924 
    4925 > volume #4.1 level 0.5546
    4926 
    4927 > volume #4.1 level 0.5
    4928 
    4929 > hide #!1.12#!6.1 cartoons
    4930 
    4931 > volume #4.1 level 0.55
    4932 
    4933 > volume #4.1 level 0.6
    4934 
    4935 > volume #4.1 level 0.7
    4936 
    4937 > volume #4.1 level 0.6
    4938 
    4939 > volume #4.1 level 0.5
    4940 
    4941 > hide #!4.1 models
    4942 
    4943 > show #!4.1 models
    4944 
    4945 > hide #!4.1 models
    4946 
    4947 > show #!5.1 models
    4948 
    4949 > volume #5.1 level 0.6127
    4950 
    4951 > volume #5.1 level 0.5
    4952 
    4953 > volume #5.1 level 0.6
    4954 
    4955 > volume #5.1 level 0.65
    4956 
    4957 > volume #5.1 level 0.6
    4958 
    4959 > volume #5.1 level 0.55
    4960 
    4961 > volume #5.1 level 0.6
    4962 
    4963 > view 76A_sandwich
    4964 
    4965 Expected an objects specifier or a view name or a keyword 
    4966 
    4967 > view name 76A_sandwich
    4968 
    4969 > clip list
    4970 
    4971 Using 2 clip planes: 
    4972 near offset 8.3312, axis 0.144,0.584,0.799, point 133.6,174.4,132.2) 
    4973 far offset 21.213, axis -0.144,-0.584,-0.799, point 135.4,181.9,142.5) 
    4974 
    4975 > view 76A_sandwish
    4976 
    4977 Expected an objects specifier or a view name or a keyword 
    4978 
    4979 > view 76A_sandwich
    4980 
    4981 > color #14.*/Y indigo
    4982 
    4983 > color #14.*/Z blue
    4984 
    4985 > color #22.*/Y indigo
    4986 
    4987 > color #22.*/Z blue
    4988 
    4989 > hide #!5.1 models
    4990 
    4991 > show #!2.1 models
    4992 
    4993 > hide #!2.1 models
    4994 
    4995 > show #!2.1 models
    4996 
    4997 > hide #!2.1 models
    4998 
    4999 > show #!2.1 models
    5000 
    5001 > hide #!6.1 models
    5002 
    5003 > show #!6.1 models
    5004 
    5005 > hide #!6.1 models
    5006 
    5007 > show #!6.1 models
    5008 
    5009 > hide #!6.1 models
    5010 
    5011 > hide #!2.1 models
    5012 
    5013 > show #!2.2 models
    5014 
    5015 > hide #!2.2 models
    5016 
    5017 > show #!2.1 models
    5018 
    5019 > show #!6.1 models
    5020 
    5021 > show #!6.2 models
    5022 
    5023 > hide #!6.2 models
    5024 
    5025 > hide #!2.1 models
    5026 
    5027 > show #!2.2 models
    5028 
    5029 > volume #2.2 level 0.55
    5030 
    5031 > volume #2.2 level 0.02952
    5032 
    5033 > volume #2.2 level 0.01523
    5034 
    5035 > volume #2.2 level 0.015
    5036 
    5037 > volume #2.3 level 0.015
    5038 
    5039 > volume #2.4 level 0.015
    5040 
    5041 > volume #2.5 level 0.01529
    5042 
    5043 > volume #2.5 level 0.015
    5044 
    5045 > volume #2.6 level 0.015
    5046 
    5047 > show #!6.2 models
    5048 
    5049 > hide #!6.2 models
    5050 
    5051 > show #!6.2 models
    5052 
    5053 > hide #!6.2 models
    5054 
    5055 > show #!6.2 models
    5056 
    5057 > cartoon hide
    5058 
    5059 > hide #!6.2 models
    5060 
    5061 > show #!6.2 models
    5062 
    5063 > hide #!6.1 models
    5064 
    5065 > show #!6.1 models
    5066 
    5067 > hide #!6.2 models
    5068 
    5069 > show #!6.2 models
    5070 
    5071 > hide #!6.2 models
    5072 
    5073 > show #!6.2 models
    5074 
    5075 > hide #!6.2 models
    5076 
    5077 > show #!6.2 models
    5078 
    5079 > hide #!6.2 models
    5080 
    5081 > show #!6.2 models
    5082 
    5083 > hide #!6.2 models
    5084 
    5085 > show #!6.2 models
    5086 
    5087 > hide #!6.2 models
    5088 
    5089 > show #!2.4 models
    5090 
    5091 > hide #!2.2 models
    5092 
    5093 > show #!6.2 models
    5094 
    5095 > hide #!6.1 models
    5096 
    5097 > hide #!1.12 models
    5098 
    5099 > show #!1.12 models
    5100 
    5101 > hide #!1.12 models
    5102 
    5103 > show #!1.12 models
    5104 
    5105 > show #!1.12#!6.2 atoms
    5106 
    5107 > show atoms
    5108 
    5109 > hide #!2.1 models
    5110 
    5111 > volume #2.4 level 0.01334
    5112 
    5113 > show #!1.2 models
    5114 
    5115 > hide #!1.2 models
    5116 
    5117 > show #!1.2 models
    5118 
    5119 > hide #!1.2 models
    5120 
    5121 > show #!1.2 models
    5122 
    5123 > hide #!1.2 models
    5124 
    5125 > show #!1.2 models
    5126 
    5127 > hide #1.2:HOH
    5128 
    5129 > open
    5130 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/EMD28254_8emm_x1.0067.mrc id
    5131 > 1.1 name 7k00_map
    5132 
    5133 Opened 7k00_map as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    5134 at level 0.0248, step 2, values float32 
    5135 
    5136 > open /Users/dalar193/wd/deltaRibosomes/aligned_maps/8emm_x1.0067_LSQ-23S.pdb
    5137 > id 1.2 name 7k00
    5138 
    5139 Summary of feedback from opening
    5140 /Users/dalar193/wd/deltaRibosomes/aligned_maps/8emm_x1.0067_LSQ-23S.pdb 
    5141 --- 
    5142 warnings | PDB SEQRES record for chain B is incomplete. Ignoring input sequence records as basis for sequence. 
    5143 PDB SEQRES record for chain Y is incomplete. Ignoring input sequence records
    5144 as basis for sequence. 
    5145 PDB SEQRES record for chain Z is incomplete. Ignoring input sequence records
    5146 as basis for sequence. 
    5147  
    5148 Chain information for 7k00 #7 
    5149 --- 
    5150 Chain | Description 
    5151 0 | No description available 
    5152 1 | No description available 
    5153 2 | No description available 
    5154 3 | No description available 
    5155 4 | No description available 
    5156 A | No description available 
    5157 B | No description available 
    5158 C | No description available 
    5159 D | No description available 
    5160 E | No description available 
    5161 F | No description available 
    5162 G | No description available 
    5163 H | No description available 
    5164 I | No description available 
    5165 J | No description available 
    5166 K | No description available 
    5167 L | No description available 
    5168 M | No description available 
    5169 N | No description available 
    5170 O | No description available 
    5171 P | No description available 
    5172 Q | No description available 
    5173 R | No description available 
    5174 S | No description available 
    5175 T | No description available 
    5176 U | No description available 
    5177 X | No description available 
    5178 Y Z | No description available 
    5179 a | No description available 
    5180 b | No description available 
    5181 c | No description available 
    5182 d | No description available 
    5183 e | No description available 
    5184 f | No description available 
    5185 g | No description available 
    5186 h | No description available 
    5187 i | No description available 
    5188 j | No description available 
    5189 k | No description available 
    5190 l | No description available 
    5191 m | No description available 
    5192 n | No description available 
    5193 o | No description available 
    5194 p | No description available 
    5195 q | No description available 
    5196 r | No description available 
    5197 s | No description available 
    5198 t | No description available 
    5199 u | No description available 
    5200 v | No description available 
    5201 w | No description available 
    5202 x | No description available 
    5203 y | No description available 
    5204 z | No description available 
    5205  
    5206 
    5207 > hide #!1.2 models
    5208 
    5209 > show #!1.2 models
    5210 
    5211 > show #!1.1 models
    5212 
    5213 > hide #!1.1 models
    5214 
    5215 > hide #!1.2 models
    5216 
    5217 > show #!1.2 models
    5218 
    5219 > hide #!1.2 models
    5220 
    5221 > show #!1.1 models
    5222 
    5223 > show #!1.2 models
    5224 
    5225 > style #!1.2,12#!6.2#!1.2.2 stick
    5226 
    5227 Changed 442744 atom styles 
    5228 
    5229 > volume #1.1 style surface
    5230 
    5231 > volume #1.1 style mesh
    5232 
    5233 > volume #1.1 style surface
    5234 
    5235 > hide #!1.2 models
    5236 
    5237 > hide #!1.1 models
    5238 
    5239 > show #!1.1 models
    5240 
    5241 > hide #!1.1 models
    5242 
    5243 > show #!1.1 models
    5244 
    5245 > volume #1.1 style mesh
    5246 
    5247 > hide #!2.4 models
    5248 
    5249 > hide #!6.2 models
    5250 
    5251 > hide #!1.1 models
    5252 
    5253 > show #!1.1 models
    5254 
    5255 > close #1.1
    5256 
    5257 > close #1.2
    5258 
    5259 > open
    5260 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/EMD28254_8emm_x1.0067.mrc id
    5261 > 1.1 name 7k00_map
    5262 
    5263 Opened 7k00_map as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    5264 at level 0.0248, step 2, values float32 
    5265 
    5266 > open /Users/dalar193/wd/deltaRibosomes/aligned_maps/8emm_x1.0067_LSQ-23S.pdb
    5267 > id 1.2 name 7k00
    5268 
    5269 Summary of feedback from opening
    5270 /Users/dalar193/wd/deltaRibosomes/aligned_maps/8emm_x1.0067_LSQ-23S.pdb 
    5271 --- 
    5272 warnings | PDB SEQRES record for chain B is incomplete. Ignoring input sequence records as basis for sequence. 
    5273 PDB SEQRES record for chain Y is incomplete. Ignoring input sequence records
    5274 as basis for sequence. 
    5275 PDB SEQRES record for chain Z is incomplete. Ignoring input sequence records
    5276 as basis for sequence. 
    5277  
    5278 Chain information for 7k00 #7 
    5279 --- 
    5280 Chain | Description 
    5281 0 | No description available 
    5282 1 | No description available 
    5283 2 | No description available 
    5284 3 | No description available 
    5285 4 | No description available 
    5286 A | No description available 
    5287 B | No description available 
    5288 C | No description available 
    5289 D | No description available 
    5290 E | No description available 
    5291 F | No description available 
    5292 G | No description available 
    5293 H | No description available 
    5294 I | No description available 
    5295 J | No description available 
    5296 K | No description available 
    5297 L | No description available 
    5298 M | No description available 
    5299 N | No description available 
    5300 O | No description available 
    5301 P | No description available 
    5302 Q | No description available 
    5303 R | No description available 
    5304 S | No description available 
    5305 T | No description available 
    5306 U | No description available 
    5307 X | No description available 
    5308 Y Z | No description available 
    5309 a | No description available 
    5310 b | No description available 
    5311 c | No description available 
    5312 d | No description available 
    5313 e | No description available 
    5314 f | No description available 
    5315 g | No description available 
    5316 h | No description available 
    5317 i | No description available 
    5318 j | No description available 
    5319 k | No description available 
    5320 l | No description available 
    5321 m | No description available 
    5322 n | No description available 
    5323 o | No description available 
    5324 p | No description available 
    5325 q | No description available 
    5326 r | No description available 
    5327 s | No description available 
    5328 t | No description available 
    5329 u | No description available 
    5330 v | No description available 
    5331 w | No description available 
    5332 x | No description available 
    5333 y | No description available 
    5334 z | No description available 
    5335  
    5336 
    5337 > style #!1.2,12 sphere
    5338 
    5339 Changed 283012 atom styles 
    5340 
    5341 > style #!1.2,12 stick
    5342 
    5343 Changed 283012 atom styles 
    5344 
    5345 > close #1.1
    5346 
    5347 > close #1.2
    5348 
    5349 > open
    5350 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/EMD28254_8emm_x1.0067.mrc id
    5351 > 1.1 name 8emm_map
    5352 
    5353 Opened 8emm_map as #7, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    5354 at level 0.0248, step 2, values float32 
    5355 
    5356 > open /Users/dalar193/wd/deltaRibosomes/aligned_maps/8emm_x1.0067_LSQ-23S.pdb
    5357 > id 1.2 name 8emm
    5358 
    5359 Summary of feedback from opening
    5360 /Users/dalar193/wd/deltaRibosomes/aligned_maps/8emm_x1.0067_LSQ-23S.pdb 
    5361 --- 
    5362 warnings | PDB SEQRES record for chain B is incomplete. Ignoring input sequence records as basis for sequence. 
    5363 PDB SEQRES record for chain Y is incomplete. Ignoring input sequence records
    5364 as basis for sequence. 
    5365 PDB SEQRES record for chain Z is incomplete. Ignoring input sequence records
    5366 as basis for sequence. 
    5367  
    5368 Chain information for 8emm #7 
    5369 --- 
    5370 Chain | Description 
    5371 0 | No description available 
    5372 1 | No description available 
    5373 2 | No description available 
    5374 3 | No description available 
    5375 4 | No description available 
    5376 A | No description available 
    5377 B | No description available 
    5378 C | No description available 
    5379 D | No description available 
    5380 E | No description available 
    5381 F | No description available 
    5382 G | No description available 
    5383 H | No description available 
    5384 I | No description available 
    5385 J | No description available 
    5386 K | No description available 
    5387 L | No description available 
    5388 M | No description available 
    5389 N | No description available 
    5390 O | No description available 
    5391 P | No description available 
    5392 Q | No description available 
    5393 R | No description available 
    5394 S | No description available 
    5395 T | No description available 
    5396 U | No description available 
    5397 X | No description available 
    5398 Y Z | No description available 
    5399 a | No description available 
    5400 b | No description available 
    5401 c | No description available 
    5402 d | No description available 
    5403 e | No description available 
    5404 f | No description available 
    5405 g | No description available 
    5406 h | No description available 
    5407 i | No description available 
    5408 j | No description available 
    5409 k | No description available 
    5410 l | No description available 
    5411 m | No description available 
    5412 n | No description available 
    5413 o | No description available 
    5414 p | No description available 
    5415 q | No description available 
    5416 r | No description available 
    5417 s | No description available 
    5418 t | No description available 
    5419 u | No description available 
    5420 v | No description available 
    5421 w | No description available 
    5422 x | No description available 
    5423 y | No description available 
    5424 z | No description available 
    5425  
    5426 
    5427 > style #!1.2,12 stick
    5428 
    5429 Changed 283012 atom styles 
    5430 
    5431 > volume #1.1 style mesh
    5432 
    5433 > volume #1.1 step 1
    5434 
    5435 > volume #1.1 level 0.02
    5436 
    5437 > color #1.2 grey
    5438 
    5439 > hide #1.2:HOH
    5440 
    5441 > color #6.*/Y indigo
    5442 
    5443 > color #6.*/Z blue
    5444 
    5445 > color #14.*/Y indigo
    5446 
    5447 > color #14.*/Z blue
    5448 
    5449 > color #22.*/Y indigo
    5450 
    5451 > color #22.*/Z blue
    5452 
    5453 > color #1.2/Y indigo
    5454 
    5455 > color #1.2/Z blue
    5456 
    5457 > hide #1.2.1 models
    5458 
    5459 > hide #1.1.1 models
    5460 
    5461 > show #1.1.1 models
    5462 
    5463 > hide #!1.2 models
    5464 
    5465 > show #!1.2 models
    5466 
    5467 > hide #!1.1 models
    5468 
    5469 > hide #!1.2 models
    5470 
    5471 > show #!1.2 models
    5472 
    5473 > hide #!1.2 models
    5474 
    5475 > hide #!6 models
    5476 
    5477 > show #!6 models
    5478 
    5479 > hide #!1.12 models
    5480 
    5481 > show #!1.12 models
    5482 
    5483 > hide #1.12.2 models
    5484 
    5485 > show #!1.1 models
    5486 
    5487 > select add #1.2
    5488 
    5489 145735 atoms, 154228 bonds, 6 pseudobonds, 13996 residues, 2 models selected 
    5490 
    5491 > select subtract #1.2
    5492 
    5493 Nothing selected 
    5494 
    5495 > show #!1.2 models
    5496 
    5497 > view 76A_sandwich
    5498 
    5499 > color #1.2/v khaki
    5500 
    5501 > color #1.2/v peru
    5502 
    5503 > color #1.2/v papaya whip
    5504 
    5505 > color #1.2/v peach puff
    5506 
    5507 > color #1.2/v moccasin
    5508 
    5509 > color #1.2/v tan
    5510 
    5511 > color #1.2/v sienna
    5512 
    5513 > show #!2.1 models
    5514 
    5515 > hide #!2.1 models
    5516 
    5517 > show #!4.1 models
    5518 
    5519 > hide #!4.1 models
    5520 
    5521 > show #!4.2 models
    5522 
    5523 > hide #!4.2 models
    5524 
    5525 > show #!5.1 models
    5526 
    5527 > hide #!5.1 models
    5528 
    5529 > show #!6.1 models
    5530 
    5531 > hide #!6.1 models
    5532 
    5533 > show #!6.2 models
    5534 
    5535 > hide #!6.2 models
    5536 
    5537 > show #!6.1 models
    5538 
    5539 > hide #!6.1 models
    5540 
    5541 > view 76A_sandwich
    5542 
    5543 [Repeated 2 time(s)]
    5544 
    5545 > ui mousemode right clip
    5546 
    5547 > volume #1.1 level 0.05
    5548 
    5549 > volume #1.1 level 0.015
    5550 
    5551 > volume #1.1 level 0.01
    5552 
    5553 > volume #1.1 level 0.012
    5554 
    5555 > view name 76A_sandwich
    5556 
    5557 > save /Users/dalar193/wd/deltaRibosomes/figure-AtRNA-sandwich.cxs includeMaps
    5558 > true
    5559 
    5560 > graphics quality 6
    5561 
    5562 > save /Users/dalar193/Desktop/image86.png supersample 3
    5563 
    5564 > volume #1.1 color black
    5565 
    5566 > save /Users/dalar193/Desktop/image87.png supersample 3
    5567 
    5568 > volume #1.1 color #b2b2ff
    5569 
    5570 > volume #1.1 color white
    5571 
    5572 > volume #1.1 color #828282
    5573 
    5574 > volume #1.1 color grey
    5575 
    5576 > save /Users/dalar193/Desktop/image88.png supersample 3
    5577 
    5578 > color #1.2 gray
    5579 
    5580 > color #1.2/Y indigo
    5581 
    5582 > color #1.2/Z blue
    5583 
    5584 > color #1.2/v sienna
    5585 
    5586 > color #1.1 gray
    5587 
    5588 > save /Users/dalar193/Desktop/image89.png supersample 3
    5589 
    5590 > volume color gray
    5591 
    5592 > hide #!1.1 models
    5593 
    5594 > hide #!1.2 models
    5595 
    5596 > show #!4.1 models
    5597 
    5598 > show #!6.1 models
    5599 
    5600 > hide #!6.1 models
    5601 
    5602 > show #!6.1 models
    5603 
    5604 > hide #!6.1 models
    5605 
    5606 > hide #!4.1 models
    5607 
    5608 > show #!1.1 models
    5609 
    5610 > show #!1.2 models
    5611 
    5612 > show #!5.1 models
    5613 
    5614 > hide #!5.1 models
    5615 
    5616 > show #!6.1 models
    5617 
    5618 > hide #!6.1 models
    5619 
    5620 > show #!6.1 models
    5621 
    5622 > hide #!6.1 models
    5623 
    5624 > show #!6.1 models
    5625 
    5626 > hide #!6.1 models
    5627 
    5628 > show #!6.1 models
    5629 
    5630 > hide #!6.1 models
    5631 
    5632 > hide #!1.2 models
    5633 
    5634 > hide #!1.1 models
    5635 
    5636 > show #!4.1 models
    5637 
    5638 > show #!6.1 models
    5639 
    5640 > hide #!6.1 models
    5641 
    5642 > hide #!4.1 models
    5643 
    5644 > show #!1.3 models
    5645 
    5646 > hide #!1.3 models
    5647 
    5648 > show #!1.3 models
    5649 
    5650 > hide #!1.3 models
    5651 
    5652 > show #8emm models
    5653 
    5654 Expected a collection of one of 'atoms', 'bonds', 'cartoons', 'models',
    5655 'pbonds', 'pseudobonds', 'ribbons', or 'surfaces' or a keyword 
    5656 
    5657 > show 8emm models
    5658 
    5659 Expected a collection of one of 'atoms', 'bonds', 'cartoons', 'models',
    5660 'pbonds', 'pseudobonds', 'ribbons', or 'surfaces' or a keyword 
    5661 
    5662 > show #!1.3 models
    5663 
    5664 > hide #!1.3 models
    5665 
    5666 > show #!10.2 models
    5667 
    5668 > show #!14.6 models
    5669 
    5670 > show #!14.7 models
    5671 
    5672 > show #!14.8 models
    5673 
    5674 > show #!14.1 models
    5675 
    5676 > show #!14.5 models
    5677 
    5678 > hide #!10.2 models
    5679 
    5680 > hide #!14.6 models
    5681 
    5682 > hide #!14.7 models
    5683 
    5684 > hide #!14.8 models
    5685 
    5686 > hide #!14.1 models
    5687 
    5688 > hide #!14.5 models
    5689 
    5690 > graphics quality 6
    5691 
    5692 > show #!5.6 models
    5693 
    5694 > show #!6.6 models
    5695 
    5696 > save /Users/dalar193/Desktop/image86.png supersample 3
    5697 
    5698 > volume #1.3 level 0.6
    5699 
    5700 > volume #1.3 level 0.5
    5701 
    5702 > volume #1.3 level 0.4
    5703 
    5704 > volume #1.3 color #1010d9
    5705 
    5706 > volume #1.3 color #ff13c2
    5707 
    5708 > volume #1.3 color #ff1317
    5709 
    5710 > volume #1.8 level 0.2
    5711 
    5712 > volume #1.8 level 0.05
    5713 
    5714 > volume #1.8 level 0.1
    5715 
    5716 > hide #!1.3 models
    5717 
    5718 > show #!1.3 models
    5719 
    5720 > hide #!1.3 models
    5721 
    5722 > show #!1.3 models
    5723 
    5724 > hide #!1.3 models
    5725 
    5726 > show #!1.3 models
    5727 
    5728 > show #!1.1 models
    5729 
    5730 > hide #!1.1 models
    5731 
    5732 > show #!1.1 models
    5733 
    5734 > hide #!1.1 models
    5735 
    5736 > show #!1.6 models
    5737 
    5738 > hide #!1.3 models
    5739 
    5740 > show #!1.3 models
    5741 
    5742 > hide #!1.3 models
    5743 
    5744 > volume #1.6 level 0.01
    5745 
    5746 > show #!1.3 models
    5747 
    5748 > hide #!1.6 models
    5749 
    5750 > show #!1.6 models
    5751 
    5752 > hide #!1.3 models
    5753 
    5754 > hide #!1.6 models
    5755 
    5756 > show #!1.2 models
    5757 
    5758 > hide #!1.2 models
    5759 
    5760 > show #!1.3 models
    5761 
    5762 > select add #1.3
    5763 
    5764 2 models selected 
    5765 
    5766 > select subtract #1.3
    5767 
    5768 Nothing selected 
    5769 
    5770 > select add #1.3
    5771 
    5772 2 models selected 
    5773 
    5774 > hide #!1.3 models
    5775 
    5776 > show #!1.3 models
    5777 
    5778 > select subtract #1.3
    5779 
    5780 Nothing selected 
    5781 
    5782 > select add #1.3
    5783 
    5784 2 models selected 
    5785 
    5786 > show #!1.6 models
    5787 
    5788 > hide #!1.6 models
    5789 
    5790 > show #!1.6 models
    5791 
    5792 > hide #!1.6 models
    5793 
    5794 > show #!1.6 models
    5795 
    5796 > hide #!1.3 models
    5797 
    5798 > show #!1.3 models
    5799 
    5800 > hide #!1.6 models
    5801 
    5802 > show #!1.8 models
    5803 
    5804 > hide #!1.8 models
    5805 
    5806 > show #!1.8 models
    5807 
    5808 > volume #1.8 level 0.06
    5809 
    5810 > volume #1.8 level 0.15
    5811 
    5812 > hide #!1.3 models
    5813 
    5814 > show #!1.3 models
    5815 
    5816 > hide #!1.3 models
    5817 
    5818 > show #!1.3 models
    5819 
    5820 > hide #!1.3 models
    5821 
    5822 > show #!1.3 models
    5823 
    5824 > hide #!1.3 models
    5825 
    5826 > show #!1.3 models
    5827 
    5828 > volume #1.8 level 0.18
    5829 
    5830 > hide #!1.3 models
    5831 
    5832 > show #!1.3 models
    5833 
    5834 > volume #1.8 level 0.16
    5835 
    5836 > hide #!1.3 models
    5837 
    5838 > show #!1.3 models
    5839 
    5840 > hide #!1.8 models
    5841 
    5842 > show #!1.10 models
    5843 
    5844 > hide #!1.3 models
    5845 
    5846 > show #!1.3 models
    5847 
    5848 > hide #!1.3 models
    5849 
    5850 > show #!1.3 models
    5851 
    5852 > hide #!1.3 models
    5853 
    5854 > show #!1.3 models
    5855 
    5856 > volume #1.10 level 0.025
    5857 
    5858 > hide #!1.3 models
    5859 
    5860 > show #!1.3 models
    5861 
    5862 > hide #!1.3 models
    5863 
    5864 > show #!1.3 models
    5865 
    5866 > hide #!1.10 models
    5867 
    5868 > show #!1.1 models
    5869 
    5870 > volume #1.1 level 0.01035
    5871 
    5872 > volume #1.1 level 0
    5873 
    5874 > volume #1.1 level 0.01
    5875 
    5876 > hide #!1.3 models
    5877 
    5878 > show #!1.3 models
    5879 
    5880 > hide #!1.3 models
    5881 
    5882 > show #!1.3 models
    5883 
    5884 > volume #1.1 level 0.015
    5885 
    5886 > hide #!1.3 models
    5887 
    5888 > show #!1.3 models
    5889 
    5890 > hide #!1.3 models
    5891 
    5892 > show #!1.3 models
    5893 
    5894 > hide #!1.1 models
    5895 
    5896 > show #!2.1 models
    5897 
    5898 > hide #!1.3 models
    5899 
    5900 > volume #2.1 level 0.025
    5901 
    5902 > volume #2.1 level 0.02
    5903 
    5904 > volume #2.1 level 0.025
    5905 
    5906 > volume #2.2 level 0.025
    5907 
    5908 > volume #2.3 level 0.025
    5909 
    5910 > volume #2.4 level 0.025
    5911 
    5912 > show #!2.2 models
    5913 
    5914 > show #!2.1 models
    5915 
    5916 > hide #!2.2 models
    5917 
    5918 > show #!2.2 models
    5919 
    5920 > hide #!2.1 models
    5921 
    5922 > show #!2.3 models
    5923 
    5924 > hide #!2.2 models
    5925 
    5926 > show #!2.4 models
    5927 
    5928 > hide #!2.3 models
    5929 
    5930 > show #!2.5 models
    5931 
    5932 > hide #!2.4 models
    5933 
    5934 > show #!2.6 models
    5935 
    5936 > hide #!2.5 models
    5937 
    5938 > volume #2.5 level 0.025
    5939 
    5940 > volume #2.6 level 0.025
    5941 
    5942 > hide #!2.6 models
    5943 
    5944 > show #!3.1 models
    5945 
    5946 > hide #!3.1 models
    5947 
    5948 > show #!3.2 models
    5949 
    5950 > hide #!3.2 models
    5951 
    5952 > show #!3.1 models
    5953 
    5954 > hide #!3.1 models
    5955 
    5956 > show #!3.2 models
    5957 
    5958 > volume #3.2 level 0.025
    5959 
    5960 > volume #3.2 level 0.09
    5961 
    5962 > volume #3.2 level 0.08
    5963 
    5964 > hide #!3.2 models
    5965 
    5966 > show #!3.2 models
    5967 
    5968 > show #!2.2 models
    5969 
    5970 > hide #!3.2 models
    5971 
    5972 > show #!3.2 models
    5973 
    5974 > hide #!3.2 models
    5975 
    5976 > show #!3.2 models
    5977 
    5978 > hide #!3.2 models
    5979 
    5980 > show #!3.2 models
    5981 
    5982 > hide #!2.2 models
    5983 
    5984 > hide #!3.2 models
    5985 
    5986 > show #!3.2 models
    5987 
    5988 > hide #!3.2 models
    5989 
    5990 > show #!4.1 models
    5991 
    5992 > volume #4.1 level 0.7
    5993 
    5994 > volume #4.1 level 0.8
    5995 
    5996 > volume #4.1 level 0.6
    5997 
    5998 > show #!1.3 models
    5999 
    6000 > hide #!1.3 models
    6001 
    6002 > show #!1.3 models
    6003 
    6004 > hide #!1.3 models
    6005 
    6006 > show #!1.3 models
    6007 
    6008 > hide #!1.3 models
    6009 
    6010 > volume #4.1 level 0.7
    6011 
    6012 > show #!1.3 models
    6013 
    6014 > hide #!1.3 models
    6015 
    6016 > show #!1.3 models
    6017 
    6018 > hide #!1.3 models
    6019 
    6020 > volume #4.1 level 0.8
    6021 
    6022 > hide #!4.1 models
    6023 
    6024 > show #!4.1 models
    6025 
    6026 > show #!4.2 models
    6027 
    6028 > hide #!4.2 models
    6029 
    6030 > show #!4.2 models
    6031 
    6032 > hide #!4.2 models
    6033 
    6034 > show #!4.2 models
    6035 
    6036 > volume #4.2 level 0.8
    6037 
    6038 > hide #!4.2 models
    6039 
    6040 > hide #!4.1 models
    6041 
    6042 > show #!4.1 models
    6043 
    6044 > hide #!4.1 models
    6045 
    6046 > show #!4.1 models
    6047 
    6048 > show #!5.1 models
    6049 
    6050 > volume #5.1 level 0.8
    6051 
    6052 > hide #!4.1 models
    6053 
    6054 > show #!4.1 models
    6055 
    6056 > hide #!5.1 models
    6057 
    6058 > show #!5.1 models
    6059 
    6060 > volume #5.1 level 0.9
    6061 
    6062 > hide #!5.1 models
    6063 
    6064 > show #!5.1 models
    6065 
    6066 > volume #5.1 level 0.95
    6067 
    6068 > volume #5.1 level 1
    6069 
    6070 > hide #!4.1 models
    6071 
    6072 > show #!4.1 models
    6073 
    6074 > hide #!5.1 models
    6075 
    6076 > show #!5.1 models
    6077 
    6078 > hide #!5.1 models
    6079 
    6080 > show #!5.1 models
    6081 
    6082 > volume #5.1 level 1.1
    6083 
    6084 > hide #!4.1 models
    6085 
    6086 > show #!4.1 models
    6087 
    6088 > hide #!5.1 models
    6089 
    6090 > show #!5.1 models
    6091 
    6092 > hide #!5.1 models
    6093 
    6094 > show #!5.1 models
    6095 
    6096 > hide #!5.1 models
    6097 
    6098 > show #!5.1 models
    6099 
    6100 > hide #!4.1 models
    6101 
    6102 > hide #!5.1 models
    6103 
    6104 > show #!6.1 models
    6105 
    6106 > hide #!6.1 models
    6107 
    6108 > show #!10.1 models
    6109 
    6110 > hide #!10.1 models
    6111 
    6112 > show #!10.1 models
    6113 
    6114 > volume #10.1 level 0.025
    6115 
    6116 > show #!11.1 models
    6117 
    6118 > hide #!11.1 models
    6119 
    6120 > show #!11.1 models
    6121 
    6122 > hide #!11 models
    6123 
    6124 > show #!11 models
    6125 
    6126 > hide #!11.1 models
    6127 
    6128 > hide #!10.1 models
    6129 
    6130 > show #!13.1 models
    6131 
    6132 > hide #!13.1 models
    6133 
    6134 > show #!13.1 models
    6135 
    6136 > volume #13.1 level 1.1
    6137 
    6138 > hide #!13.1 models
    6139 
    6140 > show #!12.1 models
    6141 
    6142 > show #!20.1 models
    6143 
    6144 > hide #!12.1 models
    6145 
    6146 > hide #!20.1 models
    6147 
    6148 > show #!20.1 models
    6149 
    6150 > volume #20.1 level 0.4
    6151 
    6152 > volume #20.1 level 0.5
    6153 
    6154 > volume #20.1 level 0.4
    6155 
    6156 > volume #20.1 level 0.25
    6157 
    6158 > volume #20.1 level 0.3
    6159 
    6160 > volume #20.1 level 0.35
    6161 
    6162 > volume #20.1 level 0.3
    6163 
    6164 > volume #20.3 level 0.3
    6165 
    6166 > volume #20.2 level 0.3
    6167 
    6168 > show #!21.2 models
    6169 
    6170 > hide #!21.2 models
    6171 
    6172 > show #!21.2 models
    6173 
    6174 > volume #21.2 level 0.4
    6175 
    6176 > volume #1.1 level 0.015000
    6177 
    6178 > volume #1.3 level 0.400000
    6179 
    6180 > volume #1.6 level 0.010000
    6181 
    6182 > volume #1.8 level 0.160000
    6183 
    6184 > volume #1.10 level 0.025000
    6185 
    6186 > volume #2.2 level 0.025000
    6187 
    6188 > volume #2.3 level 0.025000
    6189 
    6190 > volume #2.4 level 0.025000
    6191 
    6192 > volume #2.5 level 0.025000
    6193 
    6194 > volume #2.6 level 0.025000
    6195 
    6196 > volume #3.2 level 0.080000
    6197 
    6198 > volume #3.3 level 0.080000
    6199 
    6200 > volume #3.4 level 0.080000
    6201 
    6202 > volume #3.5 level 0.080000
    6203 
    6204 > volume #3.6 level 0.080000
    6205 
    6206 > volume #4.10 level 0.800000
    6207 
    6208 > volume #4.1 level 0.800000
    6209 
    6210 > volume #4.2 level 0.800000
    6211 
    6212 > volume #4.3 level 0.800000
    6213 
    6214 > volume #4.4 level 0.800000
    6215 
    6216 > volume #4.5 level 0.800000
    6217 
    6218 > volume #4.6 level 0.800000
    6219 
    6220 > volume #4.7 level 0.800000
    6221 
    6222 > volume #4.8 level 0.800000
    6223 
    6224 > volume #4.9 level 0.800000
    6225 
    6226 > volume #5.10 level 1.100000
    6227 
    6228 > volume #5.1 level 1.100000
    6229 
    6230 > volume #5.2 level 1.100000
    6231 
    6232 > volume #5.3 level 1.100000
    6233 
    6234 > volume #5.4 level 1.100000
    6235 
    6236 > volume #5.5 level 1.100000
    6237 
    6238 > volume #5.6 level 1.100000
    6239 
    6240 > volume #5.7 level 1.100000
    6241 
    6242 > volume #5.8 level 1.100000
    6243 
    6244 > volume #5.9 level 1.100000
    6245 
    6246 > volume #10.1 level 0.025000
    6247 
    6248 > volume #10.2 level 0.025000
    6249 
    6250 > volume #10.3 level 0.025000
    6251 
    6252 > volume #11.1 level 0.080000
    6253 
    6254 > volume #11.2 level 0.080000
    6255 
    6256 > volume #11.3 level 0.080000
    6257 
    6258 > volume #12.10 level 0.800000
    6259 
    6260 > volume #12.1 level 0.800000
    6261 
    6262 > volume #12.2 level 0.800000
    6263 
    6264 > volume #12.3 level 0.800000
    6265 
    6266 > volume #12.4 level 0.800000
    6267 
    6268 > volume #12.5 level 0.800000
    6269 
    6270 > volume #12.6 level 0.800000
    6271 
    6272 > volume #12.7 level 0.800000
    6273 
    6274 > volume #12.8 level 0.800000
    6275 
    6276 > volume #12.9 level 0.800000
    6277 
    6278 > volume #13.10 level 1.100000
    6279 
    6280 > volume #13.1 level 1.100000
    6281 
    6282 > volume #13.2 level 1.100000
    6283 
    6284 > volume #13.3 level 1.100000
    6285 
    6286 > volume #13.4 level 1.100000
    6287 
    6288 > volume #13.5 level 1.100000
    6289 
    6290 > volume #13.6 level 1.100000
    6291 
    6292 > volume #13.7 level 1.100000
    6293 
    6294 > volume #13.8 level 1.100000
    6295 
    6296 > volume #13.9 level 1.100000
    6297 
    6298 > volume #20.1 level 0.300000
    6299 
    6300 > volume #20.2 level 0.300000
    6301 
    6302 > volume #20.3 level 0.300000
    6303 
    6304 > volume #20.4 level 0.300000
    6305 
    6306 > volume #21.1 level 0.400000
    6307 
    6308 > volume #21.2 level 0.400000
    6309 
    6310 > volume #21.3 level 0.400000
    6311 
    6312 > volume #21.4 level 0.400000
    6313 
    6314 > volume #1.1 level 0.015000
    6315 
    6316 > volume #1.3 level 0.400000
    6317 
    6318 > volume #1.6 level 0.010000
    6319 
    6320 > volume #1.8 level 0.160000
    6321 
    6322 > volume #1.10 level 0.025000
    6323 
    6324 > volume #2.2 level 0.025000
    6325 
    6326 > volume #2.3 level 0.025000
    6327 
    6328 > volume #2.4 level 0.025000
    6329 
    6330 > volume #2.5 level 0.025000
    6331 
    6332 > volume #2.6 level 0.025000
    6333 
    6334 > volume #3.2 level 0.080000
    6335 
    6336 > volume #3.3 level 0.080000
    6337 
    6338 > volume #3.4 level 0.080000
    6339 
    6340 > volume #3.5 level 0.080000
    6341 
    6342 > volume #3.6 level 0.080000
    6343 
    6344 > volume #4.10 level 0.800000
    6345 
    6346 > volume #4.1 level 0.800000
    6347 
    6348 > volume #4.2 level 0.800000
    6349 
    6350 > volume #4.3 level 0.800000
    6351 
    6352 > volume #4.4 level 0.800000
    6353 
    6354 > volume #4.5 level 0.800000
    6355 
    6356 > volume #4.6 level 0.800000
    6357 
    6358 > volume #4.7 level 0.800000
    6359 
    6360 > volume #4.8 level 0.800000
    6361 
    6362 > volume #4.9 level 0.800000
    6363 
    6364 > volume #5.10 level 1.100000
    6365 
    6366 > volume #5.1 level 1.100000
    6367 
    6368 > volume #5.2 level 1.100000
    6369 
    6370 > volume #5.3 level 1.100000
    6371 
    6372 > volume #5.4 level 1.100000
    6373 
    6374 > volume #5.5 level 1.100000
    6375 
    6376 > volume #5.6 level 1.100000
    6377 
    6378 > volume #5.7 level 1.100000
    6379 
    6380 > volume #5.8 level 1.100000
    6381 
    6382 > volume #5.9 level 1.100000
    6383 
    6384 > volume #10.1 level 0.025000
    6385 
    6386 > volume #10.2 level 0.025000
    6387 
    6388 > volume #10.3 level 0.025000
    6389 
    6390 > volume #11.1 level 0.080000
    6391 
    6392 > volume #11.2 level 0.080000
    6393 
    6394 > volume #11.3 level 0.080000
    6395 
    6396 > volume #12.10 level 0.800000
    6397 
    6398 > volume #12.1 level 0.800000
    6399 
    6400 > volume #12.2 level 0.800000
    6401 
    6402 > volume #12.3 level 0.800000
    6403 
    6404 > volume #12.4 level 0.800000
    6405 
    6406 > volume #12.5 level 0.800000
    6407 
    6408 > volume #12.6 level 0.800000
    6409 
    6410 > volume #12.7 level 0.800000
    6411 
    6412 > volume #12.8 level 0.800000
    6413 
    6414 > volume #12.9 level 0.800000
    6415 
    6416 > volume #13.10 level 1.100000
    6417 
    6418 > volume #13.1 level 1.100000
    6419 
    6420 > volume #13.2 level 1.100000
    6421 
    6422 > volume #13.3 level 1.100000
    6423 
    6424 > volume #13.4 level 1.100000
    6425 
    6426 > volume #13.5 level 1.100000
    6427 
    6428 > volume #13.6 level 1.100000
    6429 
    6430 > volume #13.7 level 1.100000
    6431 
    6432 > volume #13.8 level 1.100000
    6433 
    6434 > volume #13.9 level 1.100000
    6435 
    6436 > volume #20.1 level 0.300000
    6437 
    6438 > volume #20.2 level 0.300000
    6439 
    6440 > volume #20.3 level 0.300000
    6441 
    6442 > volume #20.4 level 0.300000
    6443 
    6444 > volume #21.1 level 0.400000
    6445 
    6446 > volume #21.2 level 0.400000
    6447 
    6448 > volume #21.3 level 0.400000
    6449 
    6450 > volume #21.4 level 0.400000
    6451 
    6452 > graphics quality 6
    6453 
    6454 > show #!1.1 models
    6455 
    6456 > show #!1.2 models
    6457 
    6458 > save /Users/dalar193/Desktop/tmp/tmp_8emm_map_c2.png supersample 3
    6459 
    6460 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6461 
    6462 > hide #!1.1 models
    6463 
    6464 > hide #!1.2 models
    6465 
    6466 > show #!1.3 models
    6467 
    6468 > show #!1.5 models
    6469 
    6470 > save /Users/dalar193/Desktop/tmp/tmp_8b0x_map_c5.png supersample 3
    6471 
    6472 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6473 
    6474 > hide #!1.3 models
    6475 
    6476 > hide #!1.5 models
    6477 
    6478 > show #!1.6 models
    6479 
    6480 > show #!1.7 models
    6481 
    6482 > save /Users/dalar193/Desktop/tmp/tmp_8cgk_map_c7.png supersample 3
    6483 
    6484 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6485 
    6486 > hide #!1.6 models
    6487 
    6488 > hide #!1.7 models
    6489 
    6490 > show #!1.8 models
    6491 
    6492 > show #!1.9 models
    6493 
    6494 > save /Users/dalar193/Desktop/tmp/tmp_7bv8_map_c9.png supersample 3
    6495 
    6496 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6497 
    6498 > hide #!1.8 models
    6499 
    6500 > hide #!1.9 models
    6501 
    6502 > show #!1.10 models
    6503 
    6504 > show #!1.11 models
    6505 
    6506 > save /Users/dalar193/Desktop/tmp/tmp_7o1a_map_c11.png supersample 3
    6507 
    6508 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6509 
    6510 > hide #!1.10 models
    6511 
    6512 > hide #!1.11 models
    6513 
    6514 > show #!2.2 models
    6515 
    6516 > show #!6.1 models
    6517 
    6518 > show #!6.2 models
    6519 
    6520 > show #!6.4 models
    6521 
    6522 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape1_c1c2c4.png supersample 3
    6523 
    6524 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6525 
    6526 > hide #!2.2 models
    6527 
    6528 > hide #!6.1 models
    6529 
    6530 > hide #!6.2 models
    6531 
    6532 > hide #!6.4 models
    6533 
    6534 > show #!2.3 models
    6535 
    6536 > show #!6.6 models
    6537 
    6538 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape2_c6.png supersample 3
    6539 
    6540 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6541 
    6542 > hide #!2.3 models
    6543 
    6544 > hide #!6.6 models
    6545 
    6546 > show #!2.4 models
    6547 
    6548 > show #!6.2 models
    6549 
    6550 > show #!6.1 models
    6551 
    6552 > show #!6.9 models
    6553 
    6554 > show #!6.7 models
    6555 
    6556 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape3_c2c1c9c7.png supersample 3
    6557 
    6558 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6559 
    6560 > hide #!2.4 models
    6561 
    6562 > hide #!6.2 models
    6563 
    6564 > hide #!6.1 models
    6565 
    6566 > hide #!6.9 models
    6567 
    6568 > hide #!6.7 models
    6569 
    6570 > show #!2.5 models
    6571 
    6572 > show #!6.8 models
    6573 
    6574 > show #!6.6 models
    6575 
    6576 > show #!6.3 models
    6577 
    6578 > save /Users/dalar193/Desktop/tmp/tmp_d9_pe_c8c6c3.png supersample 3
    6579 
    6580 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6581 
    6582 > hide #!2.5 models
    6583 
    6584 > hide #!6.8 models
    6585 
    6586 > hide #!6.6 models
    6587 
    6588 > hide #!6.3 models
    6589 
    6590 > show #!2.6 models
    6591 
    6592 > show #!6.10 models
    6593 
    6594 > save /Users/dalar193/Desktop/tmp/tmp_d9_e_c0.png supersample 3
    6595 
    6596 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6597 
    6598 > hide #!2.6 models
    6599 
    6600 > hide #!6.10 models
    6601 
    6602 > show #!3.2 models
    6603 
    6604 > show #!6.1 models
    6605 
    6606 > show #!6.2 models
    6607 
    6608 > show #!6.4 models
    6609 
    6610 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape1_c1c2c4.png supersample 3
    6611 
    6612 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6613 
    6614 > hide #!3.2 models
    6615 
    6616 > hide #!6.1 models
    6617 
    6618 > hide #!6.2 models
    6619 
    6620 > hide #!6.4 models
    6621 
    6622 > show #!3.3 models
    6623 
    6624 > show #!6.6 models
    6625 
    6626 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape2_c6.png supersample 3
    6627 
    6628 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6629 
    6630 > hide #!3.3 models
    6631 
    6632 > hide #!6.6 models
    6633 
    6634 > show #!3.4 models
    6635 
    6636 > show #!6.2 models
    6637 
    6638 > show #!6.1 models
    6639 
    6640 > show #!6.9 models
    6641 
    6642 > show #!6.7 models
    6643 
    6644 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape3_c2c1c9c7.png supersample 3
    6645 
    6646 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6647 
    6648 > hide #!3.4 models
    6649 
    6650 > hide #!6.2 models
    6651 
    6652 > hide #!6.1 models
    6653 
    6654 > hide #!6.9 models
    6655 
    6656 > hide #!6.7 models
    6657 
    6658 > show #!3.5 models
    6659 
    6660 > show #!6.8 models
    6661 
    6662 > show #!6.6 models
    6663 
    6664 > show #!6.3 models
    6665 
    6666 > save /Users/dalar193/Desktop/tmp/tmp_d9_pe_c8c6c3.png supersample 3
    6667 
    6668 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6669 
    6670 > hide #!3.5 models
    6671 
    6672 > hide #!6.8 models
    6673 
    6674 > hide #!6.6 models
    6675 
    6676 > hide #!6.3 models
    6677 
    6678 > show #!3.6 models
    6679 
    6680 > show #!6.10 models
    6681 
    6682 > save /Users/dalar193/Desktop/tmp/tmp_d9_e_c0.png supersample 3
    6683 
    6684 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6685 
    6686 > hide #!3.6 models
    6687 
    6688 > hide #!6.10 models
    6689 
    6690 > show #!4.10 models
    6691 
    6692 > show #!6.10 models
    6693 
    6694 > save /Users/dalar193/Desktop/tmp/tmp_d9_J83_cl0_c0.png supersample 3
    6695 
    6696 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6697 
    6698 > hide #!4.10 models
    6699 
    6700 > hide #!6.10 models
    6701 
    6702 > show #!4.1 models
    6703 
    6704 > show #!6.1 models
    6705 
    6706 > save /Users/dalar193/Desktop/tmp/tmp_d9_J84_cl1_c1.png supersample 3
    6707 
    6708 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6709 
    6710 > hide #!4.1 models
    6711 
    6712 > hide #!6.1 models
    6713 
    6714 > show #!4.2 models
    6715 
    6716 > show #!6.2 models
    6717 
    6718 > save /Users/dalar193/Desktop/tmp/tmp_d9_J85_cl2_c2.png supersample 3
    6719 
    6720 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6721 
    6722 > hide #!4.2 models
    6723 
    6724 > hide #!6.2 models
    6725 
    6726 > show #!4.3 models
    6727 
    6728 > show #!6.3 models
    6729 
    6730 > save /Users/dalar193/Desktop/tmp/tmp_d9_J86_cl3_c3.png supersample 3
    6731 
    6732 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6733 
    6734 > hide #!4.3 models
    6735 
    6736 > hide #!6.3 models
    6737 
    6738 > show #!4.4 models
    6739 
    6740 > show #!6.4 models
    6741 
    6742 > save /Users/dalar193/Desktop/tmp/tmp_d9_J87_cl4_c4.png supersample 3
    6743 
    6744 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6745 
    6746 > hide #!4.4 models
    6747 
    6748 > hide #!6.4 models
    6749 
    6750 > show #!4.5 models
    6751 
    6752 > show #!6.5 models
    6753 
    6754 > save /Users/dalar193/Desktop/tmp/tmp_d9_J88_cl5_c5.png supersample 3
    6755 
    6756 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6757 
    6758 > hide #!4.5 models
    6759 
    6760 > hide #!6.5 models
    6761 
    6762 > show #!4.6 models
    6763 
    6764 > show #!6.6 models
    6765 
    6766 > save /Users/dalar193/Desktop/tmp/tmp_d9_J89_cl6_c6.png supersample 3
    6767 
    6768 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6769 
    6770 > hide #!4.6 models
    6771 
    6772 > hide #!6.6 models
    6773 
    6774 > show #!4.7 models
    6775 
    6776 > show #!6.7 models
    6777 
    6778 > save /Users/dalar193/Desktop/tmp/tmp_d9_J90_cl7_c7.png supersample 3
    6779 
    6780 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6781 
    6782 > hide #!4.7 models
    6783 
    6784 > hide #!6.7 models
    6785 
    6786 > show #!4.8 models
    6787 
    6788 > show #!6.8 models
    6789 
    6790 > save /Users/dalar193/Desktop/tmp/tmp_d9_J91_cl8_c8.png supersample 3
    6791 
    6792 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6793 
    6794 > hide #!4.8 models
    6795 
    6796 > hide #!6.8 models
    6797 
    6798 > show #!4.9 models
    6799 
    6800 > show #!6.9 models
    6801 
    6802 > save /Users/dalar193/Desktop/tmp/tmp_d9_J92_cl9_c9.png supersample 3
    6803 
    6804 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6805 
    6806 > hide #!4.9 models
    6807 
    6808 > hide #!6.9 models
    6809 
    6810 > show #!5.10 models
    6811 
    6812 > show #!6.10 models
    6813 
    6814 > save /Users/dalar193/Desktop/tmp/tmp_d9_J83_cl0_c0.png supersample 3
    6815 
    6816 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6817 
    6818 > hide #!5.10 models
    6819 
    6820 > hide #!6.10 models
    6821 
    6822 > show #!5.1 models
    6823 
    6824 > show #!6.1 models
    6825 
    6826 > save /Users/dalar193/Desktop/tmp/tmp_d9_J84_cl1_c1.png supersample 3
    6827 
    6828 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6829 
    6830 > hide #!5.1 models
    6831 
    6832 > hide #!6.1 models
    6833 
    6834 > show #!5.2 models
    6835 
    6836 > show #!6.2 models
    6837 
    6838 > save /Users/dalar193/Desktop/tmp/tmp_d9_J85_cl2_c2.png supersample 3
    6839 
    6840 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6841 
    6842 > hide #!5.2 models
    6843 
    6844 > hide #!6.2 models
    6845 
    6846 > show #!5.3 models
    6847 
    6848 > show #!6.3 models
    6849 
    6850 > save /Users/dalar193/Desktop/tmp/tmp_d9_J86_cl3_c3.png supersample 3
    6851 
    6852 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6853 
    6854 > hide #!5.3 models
    6855 
    6856 > hide #!6.3 models
    6857 
    6858 > show #!5.4 models
    6859 
    6860 > show #!6.4 models
    6861 
    6862 > save /Users/dalar193/Desktop/tmp/tmp_d9_J87_cl4_c4.png supersample 3
    6863 
    6864 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6865 
    6866 > hide #!5.4 models
    6867 
    6868 > hide #!6.4 models
    6869 
    6870 > show #!5.5 models
    6871 
    6872 > show #!6.5 models
    6873 
    6874 > save /Users/dalar193/Desktop/tmp/tmp_d9_J88_cl5_c5.png supersample 3
    6875 
    6876 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6877 
    6878 > hide #!5.5 models
    6879 
    6880 > hide #!6.5 models
    6881 
    6882 > show #!5.6 models
    6883 
    6884 > show #!6.6 models
    6885 
    6886 > save /Users/dalar193/Desktop/tmp/tmp_d9_J89_cl6_c6.png supersample 3
    6887 
    6888 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6889 
    6890 > hide #!5.6 models
    6891 
    6892 > hide #!6.6 models
    6893 
    6894 > show #!5.7 models
    6895 
    6896 > show #!6.7 models
    6897 
    6898 > save /Users/dalar193/Desktop/tmp/tmp_d9_J90_cl7_c7.png supersample 3
    6899 
    6900 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6901 
    6902 > hide #!5.7 models
    6903 
    6904 > hide #!6.7 models
    6905 
    6906 > show #!5.8 models
    6907 
    6908 > show #!6.8 models
    6909 
    6910 > save /Users/dalar193/Desktop/tmp/tmp_d9_J91_cl8_c8.png supersample 3
    6911 
    6912 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6913 
    6914 > hide #!5.8 models
    6915 
    6916 > hide #!6.8 models
    6917 
    6918 > show #!5.9 models
    6919 
    6920 > show #!6.9 models
    6921 
    6922 > save /Users/dalar193/Desktop/tmp/tmp_d9_J92_cl9_c9.png supersample 3
    6923 
    6924 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6925 
    6926 > hide #!5.9 models
    6927 
    6928 > hide #!6.9 models
    6929 
    6930 > show #!10.1 models
    6931 
    6932 > show #!14.9 models
    6933 
    6934 > show #!14.3 models
    6935 
    6936 > show #!14.2 models
    6937 
    6938 > show #!14.5 models
    6939 
    6940 > show #!14.1 models
    6941 
    6942 > save /Users/dalar193/Desktop/tmp/tmp_d10_ape_c9c3c2c5c1.png supersample 3
    6943 
    6944 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6945 
    6946 > hide #!10.1 models
    6947 
    6948 > hide #!14.9 models
    6949 
    6950 > hide #!14.3 models
    6951 
    6952 > hide #!14.2 models
    6953 
    6954 > hide #!14.5 models
    6955 
    6956 > hide #!14.1 models
    6957 
    6958 > show #!10.2 models
    6959 
    6960 > show #!14.6 models
    6961 
    6962 > show #!14.7 models
    6963 
    6964 > show #!14.8 models
    6965 
    6966 > show #!14.1 models
    6967 
    6968 > show #!14.5 models
    6969 
    6970 > save /Users/dalar193/Desktop/tmp/tmp_d10_pe_c6c7c8c1c5.png supersample 3
    6971 
    6972 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6973 
    6974 > hide #!10.2 models
    6975 
    6976 > hide #!14.6 models
    6977 
    6978 > hide #!14.7 models
    6979 
    6980 > hide #!14.8 models
    6981 
    6982 > hide #!14.1 models
    6983 
    6984 > hide #!14.5 models
    6985 
    6986 > show #!10.3 models
    6987 
    6988 > show #!14.10 models
    6989 
    6990 > show #!14.1 models
    6991 
    6992 > show #!14.5 models
    6993 
    6994 > save /Users/dalar193/Desktop/tmp/tmp_d10_e_c0c1c5.png supersample 3
    6995 
    6996 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    6997 
    6998 > hide #!10.3 models
    6999 
    7000 > hide #!14.10 models
    7001 
    7002 > hide #!14.1 models
    7003 
    7004 > hide #!14.5 models
    7005 
    7006 > show #!11.1 models
    7007 
    7008 > show #!14.9 models
    7009 
    7010 > show #!14.3 models
    7011 
    7012 > show #!14.2 models
    7013 
    7014 > show #!14.5 models
    7015 
    7016 > show #!14.1 models
    7017 
    7018 > save /Users/dalar193/Desktop/tmp/tmp_d10_ape_c9c3c2c5c1.png supersample 3
    7019 
    7020 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7021 
    7022 > hide #!11.1 models
    7023 
    7024 > hide #!14.9 models
    7025 
    7026 > hide #!14.3 models
    7027 
    7028 > hide #!14.2 models
    7029 
    7030 > hide #!14.5 models
    7031 
    7032 > hide #!14.1 models
    7033 
    7034 > show #!11.2 models
    7035 
    7036 > show #!14.6 models
    7037 
    7038 > show #!14.7 models
    7039 
    7040 > show #!14.8 models
    7041 
    7042 > show #!14.1 models
    7043 
    7044 > show #!14.5 models
    7045 
    7046 > save /Users/dalar193/Desktop/tmp/tmp_d10_pe_c6c7c8c1c5.png supersample 3
    7047 
    7048 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7049 
    7050 > hide #!11.2 models
    7051 
    7052 > hide #!14.6 models
    7053 
    7054 > hide #!14.7 models
    7055 
    7056 > hide #!14.8 models
    7057 
    7058 > hide #!14.1 models
    7059 
    7060 > hide #!14.5 models
    7061 
    7062 > show #!11.3 models
    7063 
    7064 > show #!14.10 models
    7065 
    7066 > show #!14.1 models
    7067 
    7068 > show #!14.5 models
    7069 
    7070 > save /Users/dalar193/Desktop/tmp/tmp_d10_e_c0c1c5.png supersample 3
    7071 
    7072 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7073 
    7074 > hide #!11.3 models
    7075 
    7076 > hide #!14.10 models
    7077 
    7078 > hide #!14.1 models
    7079 
    7080 > hide #!14.5 models
    7081 
    7082 > show #!12.10 models
    7083 
    7084 > show #!14.10 models
    7085 
    7086 > save /Users/dalar193/Desktop/tmp/tmp_d10_J53_c0_c0.png supersample 3
    7087 
    7088 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7089 
    7090 > hide #!12.10 models
    7091 
    7092 > hide #!14.10 models
    7093 
    7094 > show #!12.1 models
    7095 
    7096 > show #!14.1 models
    7097 
    7098 > save /Users/dalar193/Desktop/tmp/tmp_d10_J54_c1_c1.png supersample 3
    7099 
    7100 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7101 
    7102 > hide #!12.1 models
    7103 
    7104 > hide #!14.1 models
    7105 
    7106 > show #!12.2 models
    7107 
    7108 > show #!14.2 models
    7109 
    7110 > save /Users/dalar193/Desktop/tmp/tmp_d10_J55_c2_c2.png supersample 3
    7111 
    7112 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7113 
    7114 > hide #!12.2 models
    7115 
    7116 > hide #!14.2 models
    7117 
    7118 > show #!12.3 models
    7119 
    7120 > show #!14.3 models
    7121 
    7122 > save /Users/dalar193/Desktop/tmp/tmp_d10_J56_c3_c3.png supersample 3
    7123 
    7124 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7125 
    7126 > hide #!12.3 models
    7127 
    7128 > hide #!14.3 models
    7129 
    7130 > show #!12.4 models
    7131 
    7132 > show #!14.4 models
    7133 
    7134 > save /Users/dalar193/Desktop/tmp/tmp_d10_J57_c4_c4.png supersample 3
    7135 
    7136 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7137 
    7138 > hide #!12.4 models
    7139 
    7140 > hide #!14.4 models
    7141 
    7142 > show #!12.5 models
    7143 
    7144 > show #!14.5 models
    7145 
    7146 > save /Users/dalar193/Desktop/tmp/tmp_d10_J58_c5_c5.png supersample 3
    7147 
    7148 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7149 
    7150 > hide #!12.5 models
    7151 
    7152 > hide #!14.5 models
    7153 
    7154 > show #!12.6 models
    7155 
    7156 > show #!14.6 models
    7157 
    7158 > save /Users/dalar193/Desktop/tmp/tmp_d10_J59_c6_c6.png supersample 3
    7159 
    7160 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7161 
    7162 > hide #!12.6 models
    7163 
    7164 > hide #!14.6 models
    7165 
    7166 > show #!12.7 models
    7167 
    7168 > show #!14.7 models
    7169 
    7170 > save /Users/dalar193/Desktop/tmp/tmp_d10_J60_c7_c7.png supersample 3
    7171 
    7172 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7173 
    7174 > hide #!12.7 models
    7175 
    7176 > hide #!14.7 models
    7177 
    7178 > show #!12.8 models
    7179 
    7180 > show #!14.8 models
    7181 
    7182 > save /Users/dalar193/Desktop/tmp/tmp_d10_J61_c8_c8.png supersample 3
    7183 
    7184 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7185 
    7186 > hide #!12.8 models
    7187 
    7188 > hide #!14.8 models
    7189 
    7190 > show #!12.9 models
    7191 
    7192 > show #!14.9 models
    7193 
    7194 > save /Users/dalar193/Desktop/tmp/tmp_d10_J62_c9_c9.png supersample 3
    7195 
    7196 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7197 
    7198 > hide #!12.9 models
    7199 
    7200 > hide #!14.9 models
    7201 
    7202 > show #!13.10 models
    7203 
    7204 > show #!14.10 models
    7205 
    7206 > save /Users/dalar193/Desktop/tmp/tmp_d10_J53_c0_c0.png supersample 3
    7207 
    7208 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7209 
    7210 > hide #!13.10 models
    7211 
    7212 > hide #!14.10 models
    7213 
    7214 > show #!13.1 models
    7215 
    7216 > show #!14.1 models
    7217 
    7218 > save /Users/dalar193/Desktop/tmp/tmp_d10_J54_c1_c1.png supersample 3
    7219 
    7220 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7221 
    7222 > hide #!13.1 models
    7223 
    7224 > hide #!14.1 models
    7225 
    7226 > show #!13.2 models
    7227 
    7228 > show #!14.2 models
    7229 
    7230 > save /Users/dalar193/Desktop/tmp/tmp_d10_J55_c2_c2.png supersample 3
    7231 
    7232 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7233 
    7234 > hide #!13.2 models
    7235 
    7236 > hide #!14.2 models
    7237 
    7238 > show #!13.3 models
    7239 
    7240 > show #!14.3 models
    7241 
    7242 > save /Users/dalar193/Desktop/tmp/tmp_d10_J56_c3_c3.png supersample 3
    7243 
    7244 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7245 
    7246 > hide #!13.3 models
    7247 
    7248 > hide #!14.3 models
    7249 
    7250 > show #!13.4 models
    7251 
    7252 > show #!14.4 models
    7253 
    7254 > save /Users/dalar193/Desktop/tmp/tmp_d10_J57_c4_c4.png supersample 3
    7255 
    7256 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7257 
    7258 > hide #!13.4 models
    7259 
    7260 > hide #!14.4 models
    7261 
    7262 > show #!13.5 models
    7263 
    7264 > show #!14.5 models
    7265 
    7266 > save /Users/dalar193/Desktop/tmp/tmp_d10_J58_c5_c5.png supersample 3
    7267 
    7268 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7269 
    7270 > hide #!13.5 models
    7271 
    7272 > hide #!14.5 models
    7273 
    7274 > show #!13.6 models
    7275 
    7276 > show #!14.6 models
    7277 
    7278 > save /Users/dalar193/Desktop/tmp/tmp_d10_J59_c6_c6.png supersample 3
    7279 
    7280 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7281 
    7282 > hide #!13.6 models
    7283 
    7284 > hide #!14.6 models
    7285 
    7286 > show #!13.7 models
    7287 
    7288 > show #!14.7 models
    7289 
    7290 > save /Users/dalar193/Desktop/tmp/tmp_d10_J60_c7_c7.png supersample 3
    7291 
    7292 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7293 
    7294 > hide #!13.7 models
    7295 
    7296 > hide #!14.7 models
    7297 
    7298 > show #!13.8 models
    7299 
    7300 > show #!14.8 models
    7301 
    7302 > save /Users/dalar193/Desktop/tmp/tmp_d10_J61_c8_c8.png supersample 3
    7303 
    7304 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7305 
    7306 > hide #!13.8 models
    7307 
    7308 > hide #!14.8 models
    7309 
    7310 > show #!13.9 models
    7311 
    7312 > show #!14.9 models
    7313 
    7314 > save /Users/dalar193/Desktop/tmp/tmp_d10_J62_c9_c9.png supersample 3
    7315 
    7316 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7317 
    7318 > hide #!13.9 models
    7319 
    7320 > hide #!14.9 models
    7321 
    7322 > show #!20.1 models
    7323 
    7324 > show #!22.1 models
    7325 
    7326 > save /Users/dalar193/Desktop/tmp/tmp_dE_J111_ape_c1.png supersample 3
    7327 
    7328 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7329 
    7330 > hide #!20.1 models
    7331 
    7332 > hide #!22.1 models
    7333 
    7334 > show #!20.2 models
    7335 
    7336 > show #!22.2 models
    7337 
    7338 > save /Users/dalar193/Desktop/tmp/tmp_dE_J112_ap_c2.png supersample 3
    7339 
    7340 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7341 
    7342 > hide #!20.2 models
    7343 
    7344 > hide #!22.2 models
    7345 
    7346 > show #!20.3 models
    7347 
    7348 > show #!22.3 models
    7349 
    7350 > save /Users/dalar193/Desktop/tmp/tmp_dE_J113_pe_c3.png supersample 3
    7351 
    7352 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7353 
    7354 > hide #!20.3 models
    7355 
    7356 > hide #!22.3 models
    7357 
    7358 > show #!20.4 models
    7359 
    7360 > show #!22.4 models
    7361 
    7362 > save /Users/dalar193/Desktop/tmp/tmp_dE_J124_e_c4.png supersample 3
    7363 
    7364 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7365 
    7366 > hide #!20.4 models
    7367 
    7368 > hide #!22.4 models
    7369 
    7370 > show #!21.1 models
    7371 
    7372 > show #!22.1 models
    7373 
    7374 > save /Users/dalar193/Desktop/tmp/tmp_dE_J111_ape_c1.png supersample 3
    7375 
    7376 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7377 
    7378 > hide #!21.1 models
    7379 
    7380 > hide #!22.1 models
    7381 
    7382 > show #!21.2 models
    7383 
    7384 > show #!22.2 models
    7385 
    7386 > save /Users/dalar193/Desktop/tmp/tmp_dE_J112_ap_c2.png supersample 3
    7387 
    7388 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7389 
    7390 > hide #!21.2 models
    7391 
    7392 > hide #!22.2 models
    7393 
    7394 > show #!21.3 models
    7395 
    7396 > show #!22.3 models
    7397 
    7398 > save /Users/dalar193/Desktop/tmp/tmp_dE_J113_pe_c3.png supersample 3
    7399 
    7400 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7401 
    7402 > hide #!21.3 models
    7403 
    7404 > hide #!22.3 models
    7405 
    7406 > show #!21.4 models
    7407 
    7408 > show #!22.4 models
    7409 
    7410 > save /Users/dalar193/Desktop/tmp/tmp_dE_J124_e_c4.png supersample 3
    7411 
    7412 Directory "/Users/dalar193/Desktop/tmp" does not exist 
    7413 
    7414 > hide #!21.4 models
    7415 
    7416 > hide #!22.4 models
    7417 
    7418 > graphics quality 1
    7419 
    7420 > volume #1.1 level 0.015000
    7421 
    7422 > volume #1.3 level 0.400000
    7423 
    7424 > volume #1.6 level 0.010000
    7425 
    7426 > volume #1.8 level 0.160000
    7427 
    7428 > volume #1.10 level 0.025000
    7429 
    7430 > volume #2.2 level 0.025000
    7431 
    7432 > volume #2.3 level 0.025000
    7433 
    7434 > volume #2.4 level 0.025000
    7435 
    7436 > volume #2.5 level 0.025000
    7437 
    7438 > volume #2.6 level 0.025000
    7439 
    7440 > volume #3.2 level 0.080000
    7441 
    7442 > volume #3.3 level 0.080000
    7443 
    7444 > volume #3.4 level 0.080000
    7445 
    7446 > volume #3.5 level 0.080000
    7447 
    7448 > volume #3.6 level 0.080000
    7449 
    7450 > volume #4.10 level 0.800000
    7451 
    7452 > volume #4.1 level 0.800000
    7453 
    7454 > volume #4.2 level 0.800000
    7455 
    7456 > volume #4.3 level 0.800000
    7457 
    7458 > volume #4.4 level 0.800000
    7459 
    7460 > volume #4.5 level 0.800000
    7461 
    7462 > volume #4.6 level 0.800000
    7463 
    7464 > volume #4.7 level 0.800000
    7465 
    7466 > volume #4.8 level 0.800000
    7467 
    7468 > volume #4.9 level 0.800000
    7469 
    7470 > volume #5.10 level 1.100000
    7471 
    7472 > volume #5.1 level 1.100000
    7473 
    7474 > volume #5.2 level 1.100000
    7475 
    7476 > volume #5.3 level 1.100000
    7477 
    7478 > volume #5.4 level 1.100000
    7479 
    7480 > volume #5.5 level 1.100000
    7481 
    7482 > volume #5.6 level 1.100000
    7483 
    7484 > volume #5.7 level 1.100000
    7485 
    7486 > volume #5.8 level 1.100000
    7487 
    7488 > volume #5.9 level 1.100000
    7489 
    7490 > volume #10.1 level 0.025000
    7491 
    7492 > volume #10.2 level 0.025000
    7493 
    7494 > volume #10.3 level 0.025000
    7495 
    7496 > volume #11.1 level 0.080000
    7497 
    7498 > volume #11.2 level 0.080000
    7499 
    7500 > volume #11.3 level 0.080000
    7501 
    7502 > volume #12.10 level 0.800000
    7503 
    7504 > volume #12.1 level 0.800000
    7505 
    7506 > volume #12.2 level 0.800000
    7507 
    7508 > volume #12.3 level 0.800000
    7509 
    7510 > volume #12.4 level 0.800000
    7511 
    7512 > volume #12.5 level 0.800000
    7513 
    7514 > volume #12.6 level 0.800000
    7515 
    7516 > volume #12.7 level 0.800000
    7517 
    7518 > volume #12.8 level 0.800000
    7519 
    7520 > volume #12.9 level 0.800000
    7521 
    7522 > volume #13.10 level 1.100000
    7523 
    7524 > volume #13.1 level 1.100000
    7525 
    7526 > volume #13.2 level 1.100000
    7527 
    7528 > volume #13.3 level 1.100000
    7529 
    7530 > volume #13.4 level 1.100000
    7531 
    7532 > volume #13.5 level 1.100000
    7533 
    7534 > volume #13.6 level 1.100000
    7535 
    7536 > volume #13.7 level 1.100000
    7537 
    7538 > volume #13.8 level 1.100000
    7539 
    7540 > volume #13.9 level 1.100000
    7541 
    7542 > volume #20.1 level 0.300000
    7543 
    7544 > volume #20.2 level 0.300000
    7545 
    7546 > volume #20.3 level 0.300000
    7547 
    7548 > volume #20.4 level 0.300000
    7549 
    7550 > volume #21.1 level 0.400000
    7551 
    7552 > volume #21.2 level 0.400000
    7553 
    7554 > volume #21.3 level 0.400000
    7555 
    7556 > volume #21.4 level 0.400000
    7557 
    7558 > graphics quality 6
    7559 
    7560 > show #!1.1 models
    7561 
    7562 > show #!1.2 models
    7563 
    7564 > save /Users/dalar193/Desktop/tmp/tmp_8emm_map_c2.png supersample 3
    7565 
    7566 > hide #!1.1 models
    7567 
    7568 > hide #!1.2 models
    7569 
    7570 > show #!1.3 models
    7571 
    7572 > show #!1.5 models
    7573 
    7574 > save /Users/dalar193/Desktop/tmp/tmp_8b0x_map_c5.png supersample 3
    7575 
    7576 > hide #!1.3 models
    7577 
    7578 > hide #!1.5 models
    7579 
    7580 > show #!1.6 models
    7581 
    7582 > show #!1.7 models
    7583 
    7584 > save /Users/dalar193/Desktop/tmp/tmp_8cgk_map_c7.png supersample 3
    7585 
    7586 > hide #!1.6 models
    7587 
    7588 > hide #!1.7 models
    7589 
    7590 > show #!1.8 models
    7591 
    7592 > show #!1.9 models
    7593 
    7594 > save /Users/dalar193/Desktop/tmp/tmp_7bv8_map_c9.png supersample 3
    7595 
    7596 > hide #!1.8 models
    7597 
    7598 > hide #!1.9 models
    7599 
    7600 > show #!1.10 models
    7601 
    7602 > show #!1.11 models
    7603 
    7604 > save /Users/dalar193/Desktop/tmp/tmp_7o1a_map_c11.png supersample 3
    7605 
    7606 > hide #!1.10 models
    7607 
    7608 > hide #!1.11 models
    7609 
    7610 > show #!2.2 models
    7611 
    7612 > show #!6.1 models
    7613 
    7614 > show #!6.2 models
    7615 
    7616 > show #!6.4 models
    7617 
    7618 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape1_c1c2c4.png supersample 3
    7619 
    7620 > hide #!2.2 models
    7621 
    7622 > hide #!6.1 models
    7623 
    7624 > hide #!6.2 models
    7625 
    7626 > hide #!6.4 models
    7627 
    7628 > show #!2.3 models
    7629 
    7630 > show #!6.6 models
    7631 
    7632 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape2_c6.png supersample 3
    7633 
    7634 > hide #!2.3 models
    7635 
    7636 > hide #!6.6 models
    7637 
    7638 > show #!2.4 models
    7639 
    7640 > show #!6.2 models
    7641 
    7642 > show #!6.1 models
    7643 
    7644 > show #!6.9 models
    7645 
    7646 > show #!6.7 models
    7647 
    7648 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape3_c2c1c9c7.png supersample 3
    7649 
    7650 > hide #!2.4 models
    7651 
    7652 > hide #!6.2 models
    7653 
    7654 > hide #!6.1 models
    7655 
    7656 > hide #!6.9 models
    7657 
    7658 > hide #!6.7 models
    7659 
    7660 > show #!2.5 models
    7661 
    7662 > show #!6.8 models
    7663 
    7664 > show #!6.6 models
    7665 
    7666 > show #!6.3 models
    7667 
    7668 > save /Users/dalar193/Desktop/tmp/tmp_d9_pe_c8c6c3.png supersample 3
    7669 
    7670 > hide #!2.5 models
    7671 
    7672 > hide #!6.8 models
    7673 
    7674 > hide #!6.6 models
    7675 
    7676 > hide #!6.3 models
    7677 
    7678 > show #!2.6 models
    7679 
    7680 > show #!6.10 models
    7681 
    7682 > save /Users/dalar193/Desktop/tmp/tmp_d9_e_c0.png supersample 3
    7683 
    7684 > hide #!2.6 models
    7685 
    7686 > hide #!6.10 models
    7687 
    7688 > show #!3.2 models
    7689 
    7690 > show #!6.1 models
    7691 
    7692 > show #!6.2 models
    7693 
    7694 > show #!6.4 models
    7695 
    7696 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape1_c1c2c4.png supersample 3
    7697 
    7698 > hide #!3.2 models
    7699 
    7700 > hide #!6.1 models
    7701 
    7702 > hide #!6.2 models
    7703 
    7704 > hide #!6.4 models
    7705 
    7706 > show #!3.3 models
    7707 
    7708 > show #!6.6 models
    7709 
    7710 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape2_c6.png supersample 3
    7711 
    7712 > hide #!3.3 models
    7713 
    7714 > hide #!6.6 models
    7715 
    7716 > show #!3.4 models
    7717 
    7718 > show #!6.2 models
    7719 
    7720 > show #!6.1 models
    7721 
    7722 > show #!6.9 models
    7723 
    7724 > show #!6.7 models
    7725 
    7726 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape3_c2c1c9c7.png supersample 3
    7727 
    7728 > hide #!3.4 models
    7729 
    7730 > hide #!6.2 models
    7731 
    7732 > hide #!6.1 models
    7733 
    7734 > hide #!6.9 models
    7735 
    7736 > hide #!6.7 models
    7737 
    7738 > show #!3.5 models
    7739 
    7740 > show #!6.8 models
    7741 
    7742 > show #!6.6 models
    7743 
    7744 > show #!6.3 models
    7745 
    7746 > save /Users/dalar193/Desktop/tmp/tmp_d9_pe_c8c6c3.png supersample 3
    7747 
    7748 > hide #!3.5 models
    7749 
    7750 > hide #!6.8 models
    7751 
    7752 > hide #!6.6 models
    7753 
    7754 > hide #!6.3 models
    7755 
    7756 > show #!3.6 models
    7757 
    7758 > show #!6.10 models
    7759 
    7760 > save /Users/dalar193/Desktop/tmp/tmp_d9_e_c0.png supersample 3
    7761 
    7762 > hide #!3.6 models
    7763 
    7764 > hide #!6.10 models
    7765 
    7766 > show #!4.10 models
    7767 
    7768 > show #!6.10 models
    7769 
    7770 > save /Users/dalar193/Desktop/tmp/tmp_d9_J83_cl0_c0.png supersample 3
    7771 
    7772 > hide #!4.10 models
    7773 
    7774 > hide #!6.10 models
    7775 
    7776 > show #!4.1 models
    7777 
    7778 > show #!6.1 models
    7779 
    7780 > save /Users/dalar193/Desktop/tmp/tmp_d9_J84_cl1_c1.png supersample 3
    7781 
    7782 > hide #!4.1 models
    7783 
    7784 > hide #!6.1 models
    7785 
    7786 > show #!4.2 models
    7787 
    7788 > show #!6.2 models
    7789 
    7790 > save /Users/dalar193/Desktop/tmp/tmp_d9_J85_cl2_c2.png supersample 3
    7791 
    7792 > hide #!4.2 models
    7793 
    7794 > hide #!6.2 models
    7795 
    7796 > show #!4.3 models
    7797 
    7798 > show #!6.3 models
    7799 
    7800 > save /Users/dalar193/Desktop/tmp/tmp_d9_J86_cl3_c3.png supersample 3
    7801 
    7802 > hide #!4.3 models
    7803 
    7804 > hide #!6.3 models
    7805 
    7806 > show #!4.4 models
    7807 
    7808 > show #!6.4 models
    7809 
    7810 > save /Users/dalar193/Desktop/tmp/tmp_d9_J87_cl4_c4.png supersample 3
    7811 
    7812 > hide #!4.4 models
    7813 
    7814 > hide #!6.4 models
    7815 
    7816 > show #!4.5 models
    7817 
    7818 > show #!6.5 models
    7819 
    7820 > save /Users/dalar193/Desktop/tmp/tmp_d9_J88_cl5_c5.png supersample 3
    7821 
    7822 > hide #!4.5 models
    7823 
    7824 > hide #!6.5 models
    7825 
    7826 > show #!4.6 models
    7827 
    7828 > show #!6.6 models
    7829 
    7830 > save /Users/dalar193/Desktop/tmp/tmp_d9_J89_cl6_c6.png supersample 3
    7831 
    7832 > hide #!4.6 models
    7833 
    7834 > hide #!6.6 models
    7835 
    7836 > show #!4.7 models
    7837 
    7838 > show #!6.7 models
    7839 
    7840 > save /Users/dalar193/Desktop/tmp/tmp_d9_J90_cl7_c7.png supersample 3
    7841 
    7842 > hide #!4.7 models
    7843 
    7844 > hide #!6.7 models
    7845 
    7846 > show #!4.8 models
    7847 
    7848 > show #!6.8 models
    7849 
    7850 > save /Users/dalar193/Desktop/tmp/tmp_d9_J91_cl8_c8.png supersample 3
    7851 
    7852 > hide #!4.8 models
    7853 
    7854 > hide #!6.8 models
    7855 
    7856 > show #!4.9 models
    7857 
    7858 > show #!6.9 models
    7859 
    7860 > save /Users/dalar193/Desktop/tmp/tmp_d9_J92_cl9_c9.png supersample 3
    7861 
    7862 > hide #!4.9 models
    7863 
    7864 > hide #!6.9 models
    7865 
    7866 > show #!5.10 models
    7867 
    7868 > show #!6.10 models
    7869 
    7870 > save /Users/dalar193/Desktop/tmp/tmp_d9_J83_cl0_c0.png supersample 3
    7871 
    7872 > hide #!5.10 models
    7873 
    7874 > hide #!6.10 models
    7875 
    7876 > show #!5.1 models
    7877 
    7878 > show #!6.1 models
    7879 
    7880 > save /Users/dalar193/Desktop/tmp/tmp_d9_J84_cl1_c1.png supersample 3
    7881 
    7882 > hide #!5.1 models
    7883 
    7884 > hide #!6.1 models
    7885 
    7886 > show #!5.2 models
    7887 
    7888 > show #!6.2 models
    7889 
    7890 > save /Users/dalar193/Desktop/tmp/tmp_d9_J85_cl2_c2.png supersample 3
    7891 
    7892 > hide #!5.2 models
    7893 
    7894 > hide #!6.2 models
    7895 
    7896 > show #!5.3 models
    7897 
    7898 > show #!6.3 models
    7899 
    7900 > save /Users/dalar193/Desktop/tmp/tmp_d9_J86_cl3_c3.png supersample 3
    7901 
    7902 > hide #!5.3 models
    7903 
    7904 > hide #!6.3 models
    7905 
    7906 > show #!5.4 models
    7907 
    7908 > show #!6.4 models
    7909 
    7910 > save /Users/dalar193/Desktop/tmp/tmp_d9_J87_cl4_c4.png supersample 3
    7911 
    7912 > hide #!5.4 models
    7913 
    7914 > hide #!6.4 models
    7915 
    7916 > show #!5.5 models
    7917 
    7918 > show #!6.5 models
    7919 
    7920 > save /Users/dalar193/Desktop/tmp/tmp_d9_J88_cl5_c5.png supersample 3
    7921 
    7922 > hide #!5.5 models
    7923 
    7924 > hide #!6.5 models
    7925 
    7926 > show #!5.6 models
    7927 
    7928 > show #!6.6 models
    7929 
    7930 > save /Users/dalar193/Desktop/tmp/tmp_d9_J89_cl6_c6.png supersample 3
    7931 
    7932 > hide #!5.6 models
    7933 
    7934 > hide #!6.6 models
    7935 
    7936 > show #!5.7 models
    7937 
    7938 > show #!6.7 models
    7939 
    7940 > save /Users/dalar193/Desktop/tmp/tmp_d9_J90_cl7_c7.png supersample 3
    7941 
    7942 > hide #!5.7 models
    7943 
    7944 > hide #!6.7 models
    7945 
    7946 > show #!5.8 models
    7947 
    7948 > show #!6.8 models
    7949 
    7950 > save /Users/dalar193/Desktop/tmp/tmp_d9_J91_cl8_c8.png supersample 3
    7951 
    7952 > hide #!5.8 models
    7953 
    7954 > hide #!6.8 models
    7955 
    7956 > show #!5.9 models
    7957 
    7958 > show #!6.9 models
    7959 
    7960 > save /Users/dalar193/Desktop/tmp/tmp_d9_J92_cl9_c9.png supersample 3
    7961 
    7962 > hide #!5.9 models
    7963 
    7964 > hide #!6.9 models
    7965 
    7966 > show #!10.1 models
    7967 
    7968 > show #!14.9 models
    7969 
    7970 > show #!14.3 models
    7971 
    7972 > show #!14.2 models
    7973 
    7974 > show #!14.5 models
    7975 
    7976 > show #!14.1 models
    7977 
    7978 > save /Users/dalar193/Desktop/tmp/tmp_d10_ape_c9c3c2c5c1.png supersample 3
    7979 
    7980 > hide #!10.1 models
    7981 
    7982 > hide #!14.9 models
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    8708 > hide #!1.6 models
    8709 
    8710 > hide #!1.7 models
    8711 
    8712 > show #!1.8 models
    8713 
    8714 > show #!1.9 models
    8715 
    8716 > save /Users/dalar193/Desktop/tmp/tmp_7bv8_map_c9.png height 600 width 600
    8717 > supersample 3
    8718 
    8719 > hide #!1.8 models
    8720 
    8721 > hide #!1.9 models
    8722 
    8723 > show #!1.10 models
    8724 
    8725 > show #!1.11 models
    8726 
    8727 > save /Users/dalar193/Desktop/tmp/tmp_7o1a_map_c11.png height 600 width 600
    8728 > supersample 3
    8729 
    8730 > hide #!1.10 models
    8731 
    8732 > hide #!1.11 models
    8733 
    8734 > show #!2.2 models
    8735 
    8736 > show #!6.1 models
    8737 
    8738 > show #!6.2 models
    8739 
    8740 > show #!6.4 models
    8741 
    8742 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape1_c1c2c4.png height 600 width 600
    8743 > supersample 3
    8744 
    8745 > hide #!2.2 models
    8746 
    8747 > hide #!6.1 models
    8748 
    8749 > hide #!6.2 models
    8750 
    8751 > hide #!6.4 models
    8752 
    8753 > show #!2.3 models
    8754 
    8755 > show #!6.6 models
    8756 
    8757 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape2_c6.png height 600 width 600
    8758 > supersample 3
    8759 
    8760 > hide #!2.3 models
    8761 
    8762 > hide #!6.6 models
    8763 
    8764 > show #!2.4 models
    8765 
    8766 > show #!6.2 models
    8767 
    8768 > show #!6.1 models
    8769 
    8770 > show #!6.9 models
    8771 
    8772 > show #!6.7 models
    8773 
    8774 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape3_c2c1c9c7.png height 600 width
    8775 > 600 supersample 3
    8776 
    8777 > hide #!2.4 models
    8778 
    8779 > hide #!6.2 models
    8780 
    8781 > hide #!6.1 models
    8782 
    8783 > hide #!6.9 models
    8784 
    8785 > hide #!6.7 models
    8786 
    8787 > show #!2.5 models
    8788 
    8789 > show #!6.8 models
    8790 
    8791 > show #!6.6 models
    8792 
    8793 > show #!6.3 models
    8794 
    8795 > save /Users/dalar193/Desktop/tmp/tmp_d9_pe_c8c6c3.png height 600 width 600
    8796 > supersample 3
    8797 
    8798 > hide #!2.5 models
    8799 
    8800 > hide #!6.8 models
    8801 
    8802 > hide #!6.6 models
    8803 
    8804 > hide #!6.3 models
    8805 
    8806 > show #!2.6 models
    8807 
    8808 > show #!6.10 models
    8809 
    8810 > save /Users/dalar193/Desktop/tmp/tmp_d9_e_c0.png height 600 width 600
    8811 > supersample 3
    8812 
    8813 > hide #!2.6 models
    8814 
    8815 > hide #!6.10 models
    8816 
    8817 > show #!3.2 models
    8818 
    8819 > show #!6.1 models
    8820 
    8821 > show #!6.2 models
    8822 
    8823 > show #!6.4 models
    8824 
    8825 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape1_c1c2c4.png height 600 width 600
    8826 > supersample 3
    8827 
    8828 > hide #!3.2 models
    8829 
    8830 > hide #!6.1 models
    8831 
    8832 > hide #!6.2 models
    8833 
    8834 > hide #!6.4 models
    8835 
    8836 > show #!3.3 models
    8837 
    8838 > show #!6.6 models
    8839 
    8840 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape2_c6.png height 600 width 600
    8841 > supersample 3
    8842 
    8843 > hide #!3.3 models
    8844 
    8845 > hide #!6.6 models
    8846 
    8847 > show #!3.4 models
    8848 
    8849 > show #!6.2 models
    8850 
    8851 > show #!6.1 models
    8852 
    8853 > show #!6.9 models
    8854 
    8855 > show #!6.7 models
    8856 
    8857 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape3_c2c1c9c7.png height 600 width
    8858 > 600 supersample 3
    8859 
    8860 > hide #!3.4 models
    8861 
    8862 > hide #!6.2 models
    8863 
    8864 > hide #!6.1 models
    8865 
    8866 > hide #!6.9 models
    8867 
    8868 > hide #!6.7 models
    8869 
    8870 > show #!3.5 models
    8871 
    8872 > show #!6.8 models
    8873 
    8874 > show #!6.6 models
    8875 
    8876 > show #!6.3 models
    8877 
    8878 > save /Users/dalar193/Desktop/tmp/tmp_d9_pe_c8c6c3.png height 600 width 600
    8879 > supersample 3
    8880 
    8881 > hide #!3.5 models
    8882 
    8883 > hide #!6.8 models
    8884 
    8885 > hide #!6.6 models
    8886 
    8887 > hide #!6.3 models
    8888 
    8889 > show #!3.6 models
    8890 
    8891 > show #!6.10 models
    8892 
    8893 > save /Users/dalar193/Desktop/tmp/tmp_d9_e_c0.png height 600 width 600
    8894 > supersample 3
    8895 
    8896 > hide #!3.6 models
    8897 
    8898 > hide #!6.10 models
    8899 
    8900 > show #!4.10 models
    8901 
    8902 > show #!6.10 models
    8903 
    8904 > save /Users/dalar193/Desktop/tmp/tmp_d9_J83_cl0_c0.png height 600 width 600
    8905 > supersample 3
    8906 
    8907 > hide #!4.10 models
    8908 
    8909 > hide #!6.10 models
    8910 
    8911 > show #!4.1 models
    8912 
    8913 > show #!6.1 models
    8914 
    8915 > save /Users/dalar193/Desktop/tmp/tmp_d9_J84_cl1_c1.png height 600 width 600
    8916 > supersample 3
    8917 
    8918 > hide #!4.1 models
    8919 
    8920 > hide #!6.1 models
    8921 
    8922 > show #!4.2 models
    8923 
    8924 > show #!6.2 models
    8925 
    8926 > save /Users/dalar193/Desktop/tmp/tmp_d9_J85_cl2_c2.png height 600 width 600
    8927 > supersample 3
    8928 
    8929 > hide #!4.2 models
    8930 
    8931 > hide #!6.2 models
    8932 
    8933 > show #!4.3 models
    8934 
    8935 > show #!6.3 models
    8936 
    8937 > save /Users/dalar193/Desktop/tmp/tmp_d9_J86_cl3_c3.png height 600 width 600
    8938 > supersample 3
    8939 
    8940 > hide #!4.3 models
    8941 
    8942 > hide #!6.3 models
    8943 
    8944 > show #!4.4 models
    8945 
    8946 > show #!6.4 models
    8947 
    8948 > save /Users/dalar193/Desktop/tmp/tmp_d9_J87_cl4_c4.png height 600 width 600
    8949 > supersample 3
    8950 
    8951 > hide #!4.4 models
    8952 
    8953 > hide #!6.4 models
    8954 
    8955 > show #!4.5 models
    8956 
    8957 > show #!6.5 models
    8958 
    8959 > save /Users/dalar193/Desktop/tmp/tmp_d9_J88_cl5_c5.png height 600 width 600
    8960 > supersample 3
    8961 
    8962 > hide #!4.5 models
    8963 
    8964 > hide #!6.5 models
    8965 
    8966 > show #!4.6 models
    8967 
    8968 > show #!6.6 models
    8969 
    8970 > save /Users/dalar193/Desktop/tmp/tmp_d9_J89_cl6_c6.png height 600 width 600
    8971 > supersample 3
    8972 
    8973 > hide #!4.6 models
    8974 
    8975 > hide #!6.6 models
    8976 
    8977 > show #!4.7 models
    8978 
    8979 > show #!6.7 models
    8980 
    8981 > save /Users/dalar193/Desktop/tmp/tmp_d9_J90_cl7_c7.png height 600 width 600
    8982 > supersample 3
    8983 
    8984 > hide #!4.7 models
    8985 
    8986 > hide #!6.7 models
    8987 
    8988 > show #!4.8 models
    8989 
    8990 > show #!6.8 models
    8991 
    8992 > save /Users/dalar193/Desktop/tmp/tmp_d9_J91_cl8_c8.png height 600 width 600
    8993 > supersample 3
    8994 
    8995 > hide #!4.8 models
    8996 
    8997 > hide #!6.8 models
    8998 
    8999 > show #!4.9 models
    9000 
    9001 > show #!6.9 models
    9002 
    9003 > save /Users/dalar193/Desktop/tmp/tmp_d9_J92_cl9_c9.png height 600 width 600
    9004 > supersample 3
    9005 
    9006 > hide #!4.9 models
    9007 
    9008 > hide #!6.9 models
    9009 
    9010 > show #!5.10 models
    9011 
    9012 > show #!6.10 models
    9013 
    9014 > save /Users/dalar193/Desktop/tmp/tmp_d9_J83_cl0_c0.png height 600 width 600
    9015 > supersample 3
    9016 
    9017 > hide #!5.10 models
    9018 
    9019 > hide #!6.10 models
    9020 
    9021 > show #!5.1 models
    9022 
    9023 > show #!6.1 models
    9024 
    9025 > save /Users/dalar193/Desktop/tmp/tmp_d9_J84_cl1_c1.png height 600 width 600
    9026 > supersample 3
    9027 
    9028 > hide #!5.1 models
    9029 
    9030 > hide #!6.1 models
    9031 
    9032 > show #!5.2 models
    9033 
    9034 > show #!6.2 models
    9035 
    9036 > save /Users/dalar193/Desktop/tmp/tmp_d9_J85_cl2_c2.png height 600 width 600
    9037 > supersample 3
    9038 
    9039 > hide #!5.2 models
    9040 
    9041 > hide #!6.2 models
    9042 
    9043 > show #!5.3 models
    9044 
    9045 > show #!6.3 models
    9046 
    9047 > save /Users/dalar193/Desktop/tmp/tmp_d9_J86_cl3_c3.png height 600 width 600
    9048 > supersample 3
    9049 
    9050 > hide #!5.3 models
    9051 
    9052 > hide #!6.3 models
    9053 
    9054 > show #!5.4 models
    9055 
    9056 > show #!6.4 models
    9057 
    9058 > save /Users/dalar193/Desktop/tmp/tmp_d9_J87_cl4_c4.png height 600 width 600
    9059 > supersample 3
    9060 
    9061 > hide #!5.4 models
    9062 
    9063 > hide #!6.4 models
    9064 
    9065 > show #!5.5 models
    9066 
    9067 > show #!6.5 models
    9068 
    9069 > save /Users/dalar193/Desktop/tmp/tmp_d9_J88_cl5_c5.png height 600 width 600
    9070 > supersample 3
    9071 
    9072 > hide #!5.5 models
    9073 
    9074 > hide #!6.5 models
    9075 
    9076 > show #!5.6 models
    9077 
    9078 > show #!6.6 models
    9079 
    9080 > save /Users/dalar193/Desktop/tmp/tmp_d9_J89_cl6_c6.png height 600 width 600
    9081 > supersample 3
    9082 
    9083 > hide #!5.6 models
    9084 
    9085 > hide #!6.6 models
    9086 
    9087 > show #!5.7 models
    9088 
    9089 > show #!6.7 models
    9090 
    9091 > save /Users/dalar193/Desktop/tmp/tmp_d9_J90_cl7_c7.png height 600 width 600
    9092 > supersample 3
    9093 
    9094 > hide #!5.7 models
    9095 
    9096 > hide #!6.7 models
    9097 
    9098 > show #!5.8 models
    9099 
    9100 > show #!6.8 models
    9101 
    9102 > save /Users/dalar193/Desktop/tmp/tmp_d9_J91_cl8_c8.png height 600 width 600
    9103 > supersample 3
    9104 
    9105 > hide #!5.8 models
    9106 
    9107 > hide #!6.8 models
    9108 
    9109 > show #!5.9 models
    9110 
    9111 > show #!6.9 models
    9112 
    9113 > save /Users/dalar193/Desktop/tmp/tmp_d9_J92_cl9_c9.png height 600 width 600
    9114 > supersample 3
    9115 
    9116 > hide #!5.9 models
    9117 
    9118 > hide #!6.9 models
    9119 
    9120 > show #!10.1 models
    9121 
    9122 > show #!14.9 models
    9123 
    9124 > show #!14.3 models
    9125 
    9126 > show #!14.2 models
    9127 
    9128 > show #!14.5 models
    9129 
    9130 > show #!14.1 models
    9131 
    9132 > save /Users/dalar193/Desktop/tmp/tmp_d10_ape_c9c3c2c5c1.png height 600 width
    9133 > 600 supersample 3
    9134 
    9135 > hide #!10.1 models
    9136 
    9137 > hide #!14.9 models
    9138 
    9139 > hide #!14.3 models
    9140 
    9141 > hide #!14.2 models
    9142 
    9143 > hide #!14.5 models
    9144 
    9145 > hide #!14.1 models
    9146 
    9147 > show #!10.2 models
    9148 
    9149 > show #!14.6 models
    9150 
    9151 > show #!14.7 models
    9152 
    9153 > show #!14.8 models
    9154 
    9155 > show #!14.1 models
    9156 
    9157 > show #!14.5 models
    9158 
    9159 > save /Users/dalar193/Desktop/tmp/tmp_d10_pe_c6c7c8c1c5.png height 600 width
    9160 > 600 supersample 3
    9161 
    9162 > hide #!10.2 models
    9163 
    9164 > hide #!14.6 models
    9165 
    9166 > hide #!14.7 models
    9167 
    9168 > hide #!14.8 models
    9169 
    9170 > hide #!14.1 models
    9171 
    9172 > hide #!14.5 models
    9173 
    9174 > show #!10.3 models
    9175 
    9176 > show #!14.10 models
    9177 
    9178 > show #!14.1 models
    9179 
    9180 > show #!14.5 models
    9181 
    9182 > save /Users/dalar193/Desktop/tmp/tmp_d10_e_c0c1c5.png height 600 width 600
    9183 > supersample 3
    9184 
    9185 > hide #!10.3 models
    9186 
    9187 > hide #!14.10 models
    9188 
    9189 > hide #!14.1 models
    9190 
    9191 > hide #!14.5 models
    9192 
    9193 > show #!11.1 models
    9194 
    9195 > show #!14.9 models
    9196 
    9197 > show #!14.3 models
    9198 
    9199 > show #!14.2 models
    9200 
    9201 > show #!14.5 models
    9202 
    9203 > show #!14.1 models
    9204 
    9205 > save /Users/dalar193/Desktop/tmp/tmp_d10_ape_c9c3c2c5c1.png height 600 width
    9206 > 600 supersample 3
    9207 
    9208 > hide #!11.1 models
    9209 
    9210 > hide #!14.9 models
    9211 
    9212 > hide #!14.3 models
    9213 
    9214 > hide #!14.2 models
    9215 
    9216 > hide #!14.5 models
    9217 
    9218 > hide #!14.1 models
    9219 
    9220 > show #!11.2 models
    9221 
    9222 > show #!14.6 models
    9223 
    9224 > show #!14.7 models
    9225 
    9226 > show #!14.8 models
    9227 
    9228 > show #!14.1 models
    9229 
    9230 > show #!14.5 models
    9231 
    9232 > save /Users/dalar193/Desktop/tmp/tmp_d10_pe_c6c7c8c1c5.png height 600 width
    9233 > 600 supersample 3
    9234 
    9235 > hide #!11.2 models
    9236 
    9237 > hide #!14.6 models
    9238 
    9239 > hide #!14.7 models
    9240 
    9241 > hide #!14.8 models
    9242 
    9243 > hide #!14.1 models
    9244 
    9245 > hide #!14.5 models
    9246 
    9247 > show #!11.3 models
    9248 
    9249 > show #!14.10 models
    9250 
    9251 > show #!14.1 models
    9252 
    9253 > show #!14.5 models
    9254 
    9255 > save /Users/dalar193/Desktop/tmp/tmp_d10_e_c0c1c5.png height 600 width 600
    9256 > supersample 3
    9257 
    9258 > hide #!11.3 models
    9259 
    9260 > hide #!14.10 models
    9261 
    9262 > hide #!14.1 models
    9263 
    9264 > hide #!14.5 models
    9265 
    9266 > show #!12.10 models
    9267 
    9268 > show #!14.10 models
    9269 
    9270 > save /Users/dalar193/Desktop/tmp/tmp_d10_J53_c0_c0.png height 600 width 600
    9271 > supersample 3
    9272 
    9273 > hide #!12.10 models
    9274 
    9275 > hide #!14.10 models
    9276 
    9277 > show #!12.1 models
    9278 
    9279 > show #!14.1 models
    9280 
    9281 > save /Users/dalar193/Desktop/tmp/tmp_d10_J54_c1_c1.png height 600 width 600
    9282 > supersample 3
    9283 
    9284 > hide #!12.1 models
    9285 
    9286 > hide #!14.1 models
    9287 
    9288 > show #!12.2 models
    9289 
    9290 > show #!14.2 models
    9291 
    9292 > save /Users/dalar193/Desktop/tmp/tmp_d10_J55_c2_c2.png height 600 width 600
    9293 > supersample 3
    9294 
    9295 > hide #!12.2 models
    9296 
    9297 > hide #!14.2 models
    9298 
    9299 > show #!12.3 models
    9300 
    9301 > show #!14.3 models
    9302 
    9303 > save /Users/dalar193/Desktop/tmp/tmp_d10_J56_c3_c3.png height 600 width 600
    9304 > supersample 3
    9305 
    9306 > hide #!12.3 models
    9307 
    9308 > hide #!14.3 models
    9309 
    9310 > show #!12.4 models
    9311 
    9312 > show #!14.4 models
    9313 
    9314 > save /Users/dalar193/Desktop/tmp/tmp_d10_J57_c4_c4.png height 600 width 600
    9315 > supersample 3
    9316 
    9317 > hide #!12.4 models
    9318 
    9319 > hide #!14.4 models
    9320 
    9321 > show #!12.5 models
    9322 
    9323 > show #!14.5 models
    9324 
    9325 > save /Users/dalar193/Desktop/tmp/tmp_d10_J58_c5_c5.png height 600 width 600
    9326 > supersample 3
    9327 
    9328 > hide #!12.5 models
    9329 
    9330 > hide #!14.5 models
    9331 
    9332 > show #!12.6 models
    9333 
    9334 > show #!14.6 models
    9335 
    9336 > save /Users/dalar193/Desktop/tmp/tmp_d10_J59_c6_c6.png height 600 width 600
    9337 > supersample 3
    9338 
    9339 > hide #!12.6 models
    9340 
    9341 > hide #!14.6 models
    9342 
    9343 > show #!12.7 models
    9344 
    9345 > show #!14.7 models
    9346 
    9347 > save /Users/dalar193/Desktop/tmp/tmp_d10_J60_c7_c7.png height 600 width 600
    9348 > supersample 3
    9349 
    9350 > hide #!12.7 models
    9351 
    9352 > hide #!14.7 models
    9353 
    9354 > show #!12.8 models
    9355 
    9356 > show #!14.8 models
    9357 
    9358 > save /Users/dalar193/Desktop/tmp/tmp_d10_J61_c8_c8.png height 600 width 600
    9359 > supersample 3
    9360 
    9361 > hide #!12.8 models
    9362 
    9363 > hide #!14.8 models
    9364 
    9365 > show #!12.9 models
    9366 
    9367 > show #!14.9 models
    9368 
    9369 > save /Users/dalar193/Desktop/tmp/tmp_d10_J62_c9_c9.png height 600 width 600
    9370 > supersample 3
    9371 
    9372 > hide #!12.9 models
    9373 
    9374 > hide #!14.9 models
    9375 
    9376 > show #!13.10 models
    9377 
    9378 > show #!14.10 models
    9379 
    9380 > save /Users/dalar193/Desktop/tmp/tmp_d10_J53_c0_c0.png height 600 width 600
    9381 > supersample 3
    9382 
    9383 > hide #!13.10 models
    9384 
    9385 > hide #!14.10 models
    9386 
    9387 > show #!13.1 models
    9388 
    9389 > show #!14.1 models
    9390 
    9391 > save /Users/dalar193/Desktop/tmp/tmp_d10_J54_c1_c1.png height 600 width 600
    9392 > supersample 3
    9393 
    9394 > hide #!13.1 models
    9395 
    9396 > hide #!14.1 models
    9397 
    9398 > show #!13.2 models
    9399 
    9400 > show #!14.2 models
    9401 
    9402 > save /Users/dalar193/Desktop/tmp/tmp_d10_J55_c2_c2.png height 600 width 600
    9403 > supersample 3
    9404 
    9405 > hide #!13.2 models
    9406 
    9407 > hide #!14.2 models
    9408 
    9409 > show #!13.3 models
    9410 
    9411 > show #!14.3 models
    9412 
    9413 > save /Users/dalar193/Desktop/tmp/tmp_d10_J56_c3_c3.png height 600 width 600
    9414 > supersample 3
    9415 
    9416 > hide #!13.3 models
    9417 
    9418 > hide #!14.3 models
    9419 
    9420 > show #!13.4 models
    9421 
    9422 > show #!14.4 models
    9423 
    9424 > save /Users/dalar193/Desktop/tmp/tmp_d10_J57_c4_c4.png height 600 width 600
    9425 > supersample 3
    9426 
    9427 > hide #!13.4 models
    9428 
    9429 > hide #!14.4 models
    9430 
    9431 > show #!13.5 models
    9432 
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    9435 > save /Users/dalar193/Desktop/tmp/tmp_d10_J58_c5_c5.png height 600 width 600
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    9783 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape1_c1c2c4.png height 600 width 600
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    9815 > save /Users/dalar193/Desktop/tmp/tmp_d9_ape3_c2c1c9c7.png height 600 width
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    10000 > save /Users/dalar193/Desktop/tmp/tmp_d9_J88_cl5_c5.png height 600 width 600
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    10143 > save /Users/dalar193/Desktop/tmp/tmp_d9_J91_cl8_sharp_c8.png height 600
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    10149 
    10150 > show #!5.9 models
    10151 
    10152 > show #!6.9 models
    10153 
    10154 > save /Users/dalar193/Desktop/tmp/tmp_d9_J92_cl9_sharp_c9.png height 600
    10155 > width 600 supersample 3
    10156 
    10157 > hide #!5.9 models
    10158 
    10159 > hide #!6.9 models
    10160 
    10161 > show #!10.1 models
    10162 
    10163 > show #!14.9 models
    10164 
    10165 > show #!14.3 models
    10166 
    10167 > show #!14.2 models
    10168 
    10169 > show #!14.5 models
    10170 
    10171 > show #!14.1 models
    10172 
    10173 > save /Users/dalar193/Desktop/tmp/tmp_d10_ape_c9c3c2c5c1.png height 600 width
    10174 > 600 supersample 3
    10175 
    10176 > hide #!10.1 models
    10177 
    10178 > hide #!14.9 models
    10179 
    10180 > hide #!14.3 models
    10181 
    10182 > hide #!14.2 models
    10183 
    10184 > hide #!14.5 models
    10185 
    10186 > hide #!14.1 models
    10187 
    10188 > show #!10.2 models
    10189 
    10190 > show #!14.6 models
    10191 
    10192 > show #!14.7 models
    10193 
    10194 > show #!14.8 models
    10195 
    10196 > show #!14.1 models
    10197 
    10198 > show #!14.5 models
    10199 
    10200 > save /Users/dalar193/Desktop/tmp/tmp_d10_pe_c6c7c8c1c5.png height 600 width
    10201 > 600 supersample 3
    10202 
    10203 > hide #!10.2 models
    10204 
    10205 > hide #!14.6 models
    10206 
    10207 > hide #!14.7 models
    10208 
    10209 > hide #!14.8 models
    10210 
    10211 > hide #!14.1 models
    10212 
    10213 > hide #!14.5 models
    10214 
    10215 > show #!10.3 models
    10216 
    10217 > show #!14.10 models
    10218 
    10219 > show #!14.1 models
    10220 
    10221 > show #!14.5 models
    10222 
    10223 > save /Users/dalar193/Desktop/tmp/tmp_d10_e_c0c1c5.png height 600 width 600
    10224 > supersample 3
    10225 
    10226 > hide #!10.3 models
    10227 
    10228 > hide #!14.10 models
    10229 
    10230 > hide #!14.1 models
    10231 
    10232 > hide #!14.5 models
    10233 
    10234 > show #!11.1 models
    10235 
    10236 > show #!14.9 models
    10237 
    10238 > show #!14.3 models
    10239 
    10240 > show #!14.2 models
    10241 
    10242 > show #!14.5 models
    10243 
    10244 > show #!14.1 models
    10245 
    10246 > save /Users/dalar193/Desktop/tmp/tmp_d10_ape_sharp_c9c3c2c5c1.png height 600
    10247 > width 600 supersample 3
    10248 
    10249 > hide #!11.1 models
    10250 
    10251 > hide #!14.9 models
    10252 
    10253 > hide #!14.3 models
    10254 
    10255 > hide #!14.2 models
    10256 
    10257 > hide #!14.5 models
    10258 
    10259 > hide #!14.1 models
    10260 
    10261 > show #!11.2 models
    10262 
    10263 > show #!14.6 models
    10264 
    10265 > show #!14.7 models
    10266 
    10267 > show #!14.8 models
    10268 
    10269 > show #!14.1 models
    10270 
    10271 > show #!14.5 models
    10272 
    10273 > save /Users/dalar193/Desktop/tmp/tmp_d10_pe_sharp_c6c7c8c1c5.png height 600
    10274 > width 600 supersample 3
    10275 
    10276 > hide #!11.2 models
    10277 
    10278 > hide #!14.6 models
    10279 
    10280 > hide #!14.7 models
    10281 
    10282 > hide #!14.8 models
    10283 
    10284 > hide #!14.1 models
    10285 
    10286 > hide #!14.5 models
    10287 
    10288 > show #!11.3 models
    10289 
    10290 > show #!14.10 models
    10291 
    10292 > show #!14.1 models
    10293 
    10294 > show #!14.5 models
    10295 
    10296 > save /Users/dalar193/Desktop/tmp/tmp_d10_e_sharp_c0c1c5.png height 600 width
    10297 > 600 supersample 3
    10298 
    10299 > hide #!11.3 models
    10300 
    10301 > hide #!14.10 models
    10302 
    10303 > hide #!14.1 models
    10304 
    10305 > hide #!14.5 models
    10306 
    10307 > show #!12.10 models
    10308 
    10309 > show #!14.10 models
    10310 
    10311 > save /Users/dalar193/Desktop/tmp/tmp_d10_J53_c0_c0.png height 600 width 600
    10312 > supersample 3
    10313 
    10314 > hide #!12.10 models
    10315 
    10316 > hide #!14.10 models
    10317 
    10318 > show #!12.1 models
    10319 
    10320 > show #!14.1 models
    10321 
    10322 > save /Users/dalar193/Desktop/tmp/tmp_d10_J54_c1_c1.png height 600 width 600
    10323 > supersample 3
    10324 
    10325 > hide #!12.1 models
    10326 
    10327 > hide #!14.1 models
    10328 
    10329 > show #!12.2 models
    10330 
    10331 > show #!14.2 models
    10332 
    10333 > save /Users/dalar193/Desktop/tmp/tmp_d10_J55_c2_c2.png height 600 width 600
    10334 > supersample 3
    10335 
    10336 > hide #!12.2 models
    10337 
    10338 > hide #!14.2 models
    10339 
    10340 > show #!12.3 models
    10341 
    10342 > show #!14.3 models
    10343 
    10344 > save /Users/dalar193/Desktop/tmp/tmp_d10_J56_c3_c3.png height 600 width 600
    10345 > supersample 3
    10346 
    10347 > hide #!12.3 models
    10348 
    10349 > hide #!14.3 models
    10350 
    10351 > show #!12.4 models
    10352 
    10353 > show #!14.4 models
    10354 
    10355 > save /Users/dalar193/Desktop/tmp/tmp_d10_J57_c4_c4.png height 600 width 600
    10356 > supersample 3
    10357 
    10358 > hide #!12.4 models
    10359 
    10360 > hide #!14.4 models
    10361 
    10362 > show #!12.5 models
    10363 
    10364 > show #!14.5 models
    10365 
    10366 > save /Users/dalar193/Desktop/tmp/tmp_d10_J58_c5_c5.png height 600 width 600
    10367 > supersample 3
    10368 
    10369 > hide #!12.5 models
    10370 
    10371 > hide #!14.5 models
    10372 
    10373 > show #!12.6 models
    10374 
    10375 > show #!14.6 models
    10376 
    10377 > save /Users/dalar193/Desktop/tmp/tmp_d10_J59_c6_c6.png height 600 width 600
    10378 > supersample 3
    10379 
    10380 > hide #!12.6 models
    10381 
    10382 > hide #!14.6 models
    10383 
    10384 > show #!12.7 models
    10385 
    10386 > show #!14.7 models
    10387 
    10388 > save /Users/dalar193/Desktop/tmp/tmp_d10_J60_c7_c7.png height 600 width 600
    10389 > supersample 3
    10390 
    10391 > hide #!12.7 models
    10392 
    10393 > hide #!14.7 models
    10394 
    10395 > show #!12.8 models
    10396 
    10397 > show #!14.8 models
    10398 
    10399 > save /Users/dalar193/Desktop/tmp/tmp_d10_J61_c8_c8.png height 600 width 600
    10400 > supersample 3
    10401 
    10402 > hide #!12.8 models
    10403 
    10404 > hide #!14.8 models
    10405 
    10406 > show #!12.9 models
    10407 
    10408 > show #!14.9 models
    10409 
    10410 > save /Users/dalar193/Desktop/tmp/tmp_d10_J62_c9_c9.png height 600 width 600
    10411 > supersample 3
    10412 
    10413 > hide #!12.9 models
    10414 
    10415 > hide #!14.9 models
    10416 
    10417 > show #!13.10 models
    10418 
    10419 > show #!14.10 models
    10420 
    10421 > save /Users/dalar193/Desktop/tmp/tmp_d10_J53_c0_sharp_c0.png height 600
    10422 > width 600 supersample 3
    10423 
    10424 > hide #!13.10 models
    10425 
    10426 > hide #!14.10 models
    10427 
    10428 > show #!13.1 models
    10429 
    10430 > show #!14.1 models
    10431 
    10432 > save /Users/dalar193/Desktop/tmp/tmp_d10_J54_c1_sharp_c1.png height 600
    10433 > width 600 supersample 3
    10434 
    10435 > hide #!13.1 models
    10436 
    10437 > hide #!14.1 models
    10438 
    10439 > show #!13.2 models
    10440 
    10441 > show #!14.2 models
    10442 
    10443 > save /Users/dalar193/Desktop/tmp/tmp_d10_J55_c2_sharp_c2.png height 600
    10444 > width 600 supersample 3
    10445 
    10446 > hide #!13.2 models
    10447 
    10448 > hide #!14.2 models
    10449 
    10450 > show #!13.3 models
    10451 
    10452 > show #!14.3 models
    10453 
    10454 > save /Users/dalar193/Desktop/tmp/tmp_d10_J56_c3_sharp_c3.png height 600
    10455 > width 600 supersample 3
    10456 
    10457 > hide #!13.3 models
    10458 
    10459 > hide #!14.3 models
    10460 
    10461 > show #!13.4 models
    10462 
    10463 > show #!14.4 models
    10464 
    10465 > save /Users/dalar193/Desktop/tmp/tmp_d10_J57_c4_sharp_c4.png height 600
    10466 > width 600 supersample 3
    10467 
    10468 > hide #!13.4 models
    10469 
    10470 > hide #!14.4 models
    10471 
    10472 > show #!13.5 models
    10473 
    10474 > show #!14.5 models
    10475 
    10476 > save /Users/dalar193/Desktop/tmp/tmp_d10_J58_c5_sharp_c5.png height 600
    10477 > width 600 supersample 3
    10478 
    10479 > hide #!13.5 models
    10480 
    10481 > hide #!14.5 models
    10482 
    10483 > show #!13.6 models
    10484 
    10485 > show #!14.6 models
    10486 
    10487 > save /Users/dalar193/Desktop/tmp/tmp_d10_J59_c6_sharp_c6.png height 600
    10488 > width 600 supersample 3
    10489 
    10490 > hide #!13.6 models
    10491 
    10492 > hide #!14.6 models
    10493 
    10494 > show #!13.7 models
    10495 
    10496 > show #!14.7 models
    10497 
    10498 > save /Users/dalar193/Desktop/tmp/tmp_d10_J60_c7_sharp_c7.png height 600
    10499 > width 600 supersample 3
    10500 
    10501 > hide #!13.7 models
    10502 
    10503 > hide #!14.7 models
    10504 
    10505 > show #!13.8 models
    10506 
    10507 > show #!14.8 models
    10508 
    10509 > save /Users/dalar193/Desktop/tmp/tmp_d10_J61_c8_sharp_c8.png height 600
    10510 > width 600 supersample 3
    10511 
    10512 > hide #!13.8 models
    10513 
    10514 > hide #!14.8 models
    10515 
    10516 > show #!13.9 models
    10517 
    10518 > show #!14.9 models
    10519 
    10520 > save /Users/dalar193/Desktop/tmp/tmp_d10_J62_c9_sharp_c9.png height 600
    10521 > width 600 supersample 3
    10522 
    10523 > hide #!13.9 models
    10524 
    10525 > hide #!14.9 models
    10526 
    10527 > show #!20.1 models
    10528 
    10529 > show #!22.1 models
    10530 
    10531 > save /Users/dalar193/Desktop/tmp/tmp_dE_J111_ape_c1.png height 600 width 600
    10532 > supersample 3
    10533 
    10534 > hide #!20.1 models
    10535 
    10536 > hide #!22.1 models
    10537 
    10538 > show #!20.2 models
    10539 
    10540 > show #!22.2 models
    10541 
    10542 > save /Users/dalar193/Desktop/tmp/tmp_dE_J112_ap_c2.png height 600 width 600
    10543 > supersample 3
    10544 
    10545 > hide #!20.2 models
    10546 
    10547 > hide #!22.2 models
    10548 
    10549 > show #!20.3 models
    10550 
    10551 > show #!22.3 models
    10552 
    10553 > save /Users/dalar193/Desktop/tmp/tmp_dE_J113_pe_c3.png height 600 width 600
    10554 > supersample 3
    10555 
    10556 > hide #!20.3 models
    10557 
    10558 > hide #!22.3 models
    10559 
    10560 > show #!20.4 models
    10561 
    10562 > show #!22.4 models
    10563 
    10564 > save /Users/dalar193/Desktop/tmp/tmp_dE_J124_e_c4.png height 600 width 600
    10565 > supersample 3
    10566 
    10567 > hide #!20.4 models
    10568 
    10569 > hide #!22.4 models
    10570 
    10571 > show #!21.1 models
    10572 
    10573 > show #!22.1 models
    10574 
    10575 > save /Users/dalar193/Desktop/tmp/tmp_dE_J111_ape_sharp_c1.png height 600
    10576 > width 600 supersample 3
    10577 
    10578 > hide #!21.1 models
    10579 
    10580 > hide #!22.1 models
    10581 
    10582 > show #!21.2 models
    10583 
    10584 > show #!22.2 models
    10585 
    10586 > save /Users/dalar193/Desktop/tmp/tmp_dE_J112_ap_sharp_c2.png height 600
    10587 > width 600 supersample 3
    10588 
    10589 > hide #!21.2 models
    10590 
    10591 > hide #!22.2 models
    10592 
    10593 > show #!21.3 models
    10594 
    10595 > show #!22.3 models
    10596 
    10597 > save /Users/dalar193/Desktop/tmp/tmp_dE_J113_pe_sharp_c3.png height 600
    10598 > width 600 supersample 3
    10599 
    10600 > hide #!21.3 models
    10601 
    10602 > hide #!22.3 models
    10603 
    10604 > show #!21.4 models
    10605 
    10606 > show #!22.4 models
    10607 
    10608 > save /Users/dalar193/Desktop/tmp/tmp_dE_J124_e_sharp_c4.png height 600 width
    10609 > 600 supersample 3
    10610 
    10611 > hide #!21.4 models
    10612 
    10613 > hide #!22.4 models
    10614 
    10615 > graphics quality 1
    10616 
    10617 > graphics quality 6
    10618 
    10619 > show #!20.1 models
    10620 
    10621 > show #!22.1 models
    10622 
    10623 > show #!6.1 models
    10624 
    10625 > save /Users/dalar193/Desktop/tmp/tmp_dE_J111_ape_c1c1.png height 600 width
    10626 > 600 supersample 3
    10627 
    10628 > hide #!20.1 models
    10629 
    10630 > hide #!22.1 models
    10631 
    10632 > hide #!6.1 models
    10633 
    10634 > show #!20.2 models
    10635 
    10636 > show #!22.2 models
    10637 
    10638 > show #!6.1 models
    10639 
    10640 > save /Users/dalar193/Desktop/tmp/tmp_dE_J112_ap_c2c1.png height 600 width
    10641 > 600 supersample 3
    10642 
    10643 > hide #!20.2 models
    10644 
    10645 > hide #!22.2 models
    10646 
    10647 > hide #!6.1 models
    10648 
    10649 > show #!20.3 models
    10650 
    10651 > show #!22.3 models
    10652 
    10653 > save /Users/dalar193/Desktop/tmp/tmp_dE_J113_pe_c3.png height 600 width 600
    10654 > supersample 3
    10655 
    10656 > hide #!20.3 models
    10657 
    10658 > hide #!22.3 models
    10659 
    10660 > show #!20.4 models
    10661 
    10662 > show #!22.4 models
    10663 
    10664 > save /Users/dalar193/Desktop/tmp/tmp_dE_J124_e_c4.png height 600 width 600
    10665 > supersample 3
    10666 
    10667 > hide #!20.4 models
    10668 
    10669 > hide #!22.4 models
    10670 
    10671 > show #!21.1 models
    10672 
    10673 > show #!22.1 models
    10674 
    10675 > show #!6.1 models
    10676 
    10677 > save /Users/dalar193/Desktop/tmp/tmp_dE_J111_ape_sharp_c1c1.png height 600
    10678 > width 600 supersample 3
    10679 
    10680 > hide #!21.1 models
    10681 
    10682 > hide #!22.1 models
    10683 
    10684 > hide #!6.1 models
    10685 
    10686 > show #!21.2 models
    10687 
    10688 > show #!22.2 models
    10689 
    10690 > show #!6.1 models
    10691 
    10692 > save /Users/dalar193/Desktop/tmp/tmp_dE_J112_ap_sharp_c2c1.png height 600
    10693 > width 600 supersample 3
    10694 
    10695 > hide #!21.2 models
    10696 
    10697 > hide #!22.2 models
    10698 
    10699 > hide #!6.1 models
    10700 
    10701 > show #!21.3 models
    10702 
    10703 > show #!22.3 models
    10704 
    10705 > save /Users/dalar193/Desktop/tmp/tmp_dE_J113_pe_sharp_c3.png height 600
    10706 > width 600 supersample 3
    10707 
    10708 > hide #!21.3 models
    10709 
    10710 > hide #!22.3 models
    10711 
    10712 > show #!21.4 models
    10713 
    10714 > show #!22.4 models
    10715 
    10716 > save /Users/dalar193/Desktop/tmp/tmp_dE_J124_e_sharp_c4.png height 600 width
    10717 > 600 supersample 3
    10718 
    10719 > hide #!21.4 models
    10720 
    10721 > hide #!22.4 models
    10722 
    10723 > hide #!2 models
    10724 
    10725 > show #!2 models
    10726 
    10727 > show #!2.1 models
    10728 
    10729 > hide #!2.1 models
    10730 
    10731 > show #!2.1 models
    10732 
    10733 > hide #!2.1 models
    10734 
    10735 > show #!2.1 models
    10736 
    10737 > hide #!2.1 models
    10738 
    10739 > volume surfaceSmoothing
    10740 
    10741 Missing "surfaceSmoothing" keyword's argument 
    10742 
    10743 > volume style surface
    10744 
    10745 > show #!2.1 models
    10746 
    10747 > hide #!2.1 models
    10748 
    10749 > show #!2.1 models
    10750 
    10751 > hide #!2.1 models
    10752 
    10753 > show #!2.1 models
    10754 
    10755 > hide #!2.1 models
    10756 
    10757 > show #!2.1 models
    10758 
    10759 > hide #!1.12 models
    10760 
    10761 > show #!1.12 models
    10762 
    10763 > hide #!1.12 models
    10764 
    10765 > show #!1.12 models
    10766 
    10767 > hide #!1.12 models
    10768 
    10769 > show #!1.12 models
    10770 
    10771 > hide #!1.12 models
    10772 
    10773 > show #!1.12 models
    10774 
    10775 > hide #!1.12 models
    10776 
    10777 > show #!1.12 models
    10778 
    10779 > hide #!1.12 models
    10780 
    10781 > show #!1.12 models
    10782 
    10783 > preset cartoons/nucleotides licorice/ovals
    10784 
    10785 Using preset: Cartoons/Nucleotides / Licorice/Ovals 
    10786 Changed 0 atom styles 
    10787 Preset expands to these ChimeraX commands:
    10788 
    10789    
    10790    
    10791     show nucleic
    10792     hide protein|solvent|H
    10793     surf hide
    10794     style (protein|nucleic|solvent) & @@draw_mode=0 stick
    10795     cartoon
    10796     cartoon style modeh def arrows t arrowshelix f arrowscale 2 wid 2 thick 0.4 sides 12 div 20
    10797     cartoon style ~(nucleic|strand) x round
    10798     cartoon style (nucleic|strand) x rect
    10799     cartoon style protein modeh default arrows f x round width 1 thick 1
    10800     cartoon style nucleic x round width 1.6 thick 1.6
    10801     nucleotides tube/slab shape ellipsoid
    10802 
    10803  
    10804 
    10805 > hide #!1.12 models
    10806 
    10807 > show #!1.12 models
    10808 
    10809 > hide #!1.12 models
    10810 
    10811 > show #!1.12 models
    10812 
    10813 > hide #!1.12 models
    10814 
    10815 > show #!1.12 models
    10816 
    10817 > hide #!2.1 models
    10818 
    10819 > show #!2.1 models
    10820 
    10821 > hide #!2.1 models
    10822 
    10823 > style stick
    10824 
    10825 Changed 999974 atom styles 
    10826 
    10827 > show #!1.10 models
    10828 
    10829 > hide #!1.10 models
    10830 
    10831 > hide #!1.12 models
    10832 
    10833 > show #!1.11 models
    10834 
    10835 > hide #!1.11 models
    10836 
    10837 > show #!1.11 models
    10838 
    10839 > hide #!1.11 models
    10840 
    10841 > show #!1.12 models
    10842 
    10843 > show #!1.11 models
    10844 
    10845 > style stick
    10846 
    10847 Changed 999974 atom styles 
    10848 
    10849 > nucleotides fill
    10850 
    10851 > nucleotides stick
    10852 
    10853 Missing or invalid "representation" argument: Should be one of 'atoms',
    10854 'fill', 'ladder', 'slab', 'stubs', or 'tube/slab' 
    10855 
    10856 > nucleotides atoms
    10857 
    10858 > nucleotides fill
    10859 
    10860 > nucleotides atoms
    10861 
    10862 > cartoon ribbon
    10863 
    10864 Expected an atoms specifier or a keyword 
    10865 
    10866 > cartoon style ribbon
    10867 
    10868 Expected an atoms specifier or a keyword 
    10869 
    10870 > style ribbon
    10871 
    10872 Expected a keyword 
    10873 
    10874 > preset ribbon
    10875 
    10876 Using preset: Cartoons/Nucleotides / Ribbons/Slabs 
    10877 Changed 0 atom styles 
    10878 Preset expands to these ChimeraX commands:
    10879 
    10880    
    10881    
    10882     show nucleic
    10883     hide protein|solvent|H
    10884     surf hide
    10885     style (protein|nucleic|solvent) & @@draw_mode=0 stick
    10886     cartoon
    10887     cartoon style modeh def arrows t arrowshelix f arrowscale 2 wid 2 thick 0.4 sides 12 div 20
    10888     cartoon style ~(nucleic|strand) x round
    10889     cartoon style (nucleic|strand) x rect
    10890     nucleotides tube/slab shape box
    10891 
    10892  
    10893 
    10894 > view 76A_sandwich
    10895 
    10896 > savepos list
    10897 
    10898 Unknown command: savepos list 
    10899 
    10900 > hide #!1.11 models
    10901 
    10902 > hide #!1.12 models
    10903 
    10904 > show #!2.1 models
    10905 
    10906 > hide #!2.1 models
    10907 
    10908 > show #!2.2 models
    10909 
    10910 > show #!2.1 models
    10911 
    10912 > hide #!2.2 models
    10913 
    10914 > show #!2.2 models
    10915 
    10916 > hide #!2.1 models
    10917 
    10918 > show #!2.4 models
    10919 
    10920 > hide #!2.2 models
    10921 
    10922 > volume style mesh
    10923 
    10924 > show #!6.2 models
    10925 
    10926 > hide #!6.2 models
    10927 
    10928 > show #!6.2 models
    10929 
    10930 > hide #!6.2 models
    10931 
    10932 > show #!6.2 models
    10933 
    10934 > hide #!6.2 models
    10935 
    10936 > show #!6.2 models
    10937 
    10938 > hide #!6.2 models
    10939 
    10940 > show #!6.2 models
    10941 
    10942 > show #!6.1 models
    10943 
    10944 > hide #!6.1 models
    10945 
    10946 > show #!6.1 models
    10947 
    10948 > hide #!6.1 models
    10949 
    10950 > show #!1.1 models
    10951 
    10952 > hide #!1.1 models
    10953 
    10954 > show #!1.1 models
    10955 
    10956 > hide #!1.1 models
    10957 
    10958 > show #!1.2 models
    10959 
    10960 > hide #!1.2 models
    10961 
    10962 > show #!1.2 models
    10963 
    10964 > hide #!6.2 models
    10965 
    10966 > show #!6.2 models
    10967 
    10968 > hide #!6.2 models
    10969 
    10970 > show #!6.2 models
    10971 
    10972 > hide #!6.2 models
    10973 
    10974 > show #!6.2 models
    10975 
    10976 > hide #!6.2 models
    10977 
    10978 > show #!6.2 models
    10979 
    10980 > hide #!6.2 models
    10981 
    10982 > show #!6.2 models
    10983 
    10984 > hide #!6.2 models
    10985 
    10986 > show #!6.2 models
    10987 
    10988 > hide #!1.2 models
    10989 
    10990 > show #!6.1 models
    10991 
    10992 > hide #!6.1 models
    10993 
    10994 > show #!6.1 models
    10995 
    10996 > hide #!6.2 models
    10997 
    10998 > show #!6.2 models
    10999 
    11000 > hide #!6.1 models
    11001 
    11002 > show #!1.2 models
    11003 
    11004 > hide #!1.2 models
    11005 
    11006 > hide #!2.4 models
    11007 
    11008 > show #!2.4 models
    11009 
    11010 > hide #!2.4 models
    11011 
    11012 > show #!2.4 models
    11013 
    11014 > show #!2.2 models
    11015 
    11016 > hide #!2.2 models
    11017 
    11018 > show #!2.2 models
    11019 
    11020 > hide #!2.2 models
    11021 
    11022 > show #!2.3 models
    11023 
    11024 > hide #!2.3 models
    11025 
    11026 > nucleotides #!6.2 fill
    11027 
    11028 > style nucleic & #!6.2 stick
    11029 
    11030 Changed 9184 atom styles 
    11031 
    11032 > style nuc stick
    11033 
    11034 Expected a keyword 
    11035 
    11036 > style nucleic stick
    11037 
    11038 Changed 719706 atom styles 
    11039 
    11040 > show #!1.2 models
    11041 
    11042 > hide #!1.2 models
    11043 
    11044 > show #!1.2 models
    11045 
    11046 > hide #!1.2 models
    11047 
    11048 > show #!1.2 models
    11049 
    11050 > hide #!1.2 models
    11051 
    11052 > show #!1.2 models
    11053 
    11054 > style nucleic stick
    11055 
    11056 Changed 719706 atom styles 
    11057 
    11058 > style nucleic fill
    11059 
    11060 Expected a keyword 
    11061 
    11062 > style nucleic stick
    11063 
    11064 Changed 719706 atom styles 
    11065 
    11066 > nucleotides #!1.2#!6.2 atoms
    11067 
    11068 > style nucleic & #!1.2#!6.2 stick
    11069 
    11070 Changed 107043 atom styles 
    11071 
    11072 > nucleotides atoms
    11073 
    11074 > nucleotides fill
    11075 
    11076 > hide #!1.2 models
    11077 
    11078 > hide #!2.4 models
    11079 
    11080 > show #!2.4 models
    11081 
    11082 > show #!6.3 models
    11083 
    11084 > hide #!6.3 models
    11085 
    11086 > show #!6.4 models
    11087 
    11088 > hide #!6.4 models
    11089 
    11090 > show #!6.5 models
    11091 
    11092 > hide #!6.5 models
    11093 
    11094 > show #!6.6 models
    11095 
    11096 > hide #!6.6 models
    11097 
    11098 > show #!6.6 models
    11099 
    11100 > show #!6.5 models
    11101 
    11102 > view #6.1/a:2439
    11103 
    11104 > show #!1.2 models
    11105 
    11106 > show #!1.1 models
    11107 
    11108 > hide #!1.1 models
    11109 
    11110 > hide #!1.2 models
    11111 
    11112 > show #!1.1 models
    11113 
    11114 > show #!1.2 models
    11115 
    11116 > hide #!1.1 models
    11117 
    11118 > hide #!1.2 models
    11119 
    11120 > hide #!6.6 models
    11121 
    11122 > hide #!6.5 models
    11123 
    11124 > hide #!6.2 models
    11125 
    11126 > show #!6.2 models
    11127 
    11128 > hide #!2.4 models
    11129 
    11130 > show #!2.4 models
    11131 
    11132 > show #!4.1 models
    11133 
    11134 > hide #!4.1 models
    11135 
    11136 > show #!4.1 models
    11137 
    11138 > hide #!4.1 models
    11139 
    11140 > hide #!2.4 models
    11141 
    11142 > show #!1.3 models
    11143 
    11144 > show #!1.5 models
    11145 
    11146 > hide #!1.5 models
    11147 
    11148 > hide #!1.3 models
    11149 
    11150 > show #!1.3 models
    11151 
    11152 > hide #!1.3 models
    11153 
    11154 > show #!1.3 models
    11155 
    11156 > hide #!1.3 models
    11157 
    11158 > show #!1.6 models
    11159 
    11160 > hide #!1.6 models
    11161 
    11162 > show #!1.7 models
    11163 
    11164 > hide #!1.7 models
    11165 
    11166 > show #!1.8 models
    11167 
    11168 > hide #!1.8 models
    11169 
    11170 > show #!1.9 models
    11171 
    11172 > hide #!1.9 models
    11173 
    11174 > show #!1.10 models
    11175 
    11176 > hide #!1.10 models
    11177 
    11178 > hide #!6.2 models
    11179 
    11180 > show #!6.1 models
    11181 
    11182 > show #!6.2 models
    11183 
    11184 > show #!6.3 models
    11185 
    11186 > show #!6.5 models
    11187 
    11188 > show #!6.6 models
    11189 
    11190 > show #!6.4 models
    11191 
    11192 > show #!6.7 models
    11193 
    11194 > show #!6.8 models
    11195 
    11196 > show #!6.9 models
    11197 
    11198 > show #!6.10 models
    11199 
    11200 > hide #!6.1 models
    11201 
    11202 > show #!6.1 models
    11203 
    11204 > hide #!6.1 models
    11205 
    11206 > hide #!6.2 models
    11207 
    11208 > hide #!6.3 models
    11209 
    11210 > hide #!6.4 models
    11211 
    11212 > show #!6.4 models
    11213 
    11214 > hide #!6.5 models
    11215 
    11216 > hide #!6.6 models
    11217 
    11218 > hide #!6.7 models
    11219 
    11220 > hide #!6.8 models
    11221 
    11222 > hide #!6.9 models
    11223 
    11224 > hide #!6.10 models
    11225 
    11226 > show #!6.10 models
    11227 
    11228 > show #!1.2 models
    11229 
    11230 > show #!1.5 models
    11231 
    11232 > hide #!1.5 models
    11233 
    11234 > show #!1.5 models
    11235 
    11236 > hide #!1.5 models
    11237 
    11238 > show #!1.5 models
    11239 
    11240 > hide #!1.5 models
    11241 
    11242 > show #!1.5 models
    11243 
    11244 > show #!14.1 models
    11245 
    11246 > hide #!14.1 models
    11247 
    11248 > show #!14.1 models
    11249 
    11250 > hide #!14.1 models
    11251 
    11252 > show #!14.1 models
    11253 
    11254 > hide #!14.1 models
    11255 
    11256 > show #!14.2 models
    11257 
    11258 > hide #!14.2 models
    11259 
    11260 > show #!14.4 models
    11261 
    11262 > hide #!14.4 models
    11263 
    11264 > show #!14.5 models
    11265 
    11266 > hide #!14.5 models
    11267 
    11268 > show #!14.6 models
    11269 
    11270 > hide #!14.6 models
    11271 
    11272 > show #!14.7 models
    11273 
    11274 > hide #!14.7 models
    11275 
    11276 > show #!14.8 models
    11277 
    11278 > hide #!14.8 models
    11279 
    11280 > show #!14.9 models
    11281 
    11282 > hide #!14.9 models
    11283 
    11284 > show #!14.10 models
    11285 
    11286 > hide #!14.10 models
    11287 
    11288 > show #!14.10 models
    11289 
    11290 > view #6.1/a:2059
    11291 
    11292 > hide #!6.10 models
    11293 
    11294 > hide #!6.4 models
    11295 
    11296 > hide #!1.5 models
    11297 
    11298 > hide #!1.2 models
    11299 
    11300 > hide #!14.10 models
    11301 
    11302 > show #!1.2 models
    11303 
    11304 > color #1.2/a:2059-2062 light pink
    11305 
    11306 > color #1.2/a:2447-2453 coral
    11307 
    11308 > color #1.2/a:2499-2507 chartreuse
    11309 
    11310 > color #1.2/a:2580-2587 turquoise
    11311 
    11312 > color #1.2/a:2607-2510 steel blue
    11313 
    11314 > color #1.2/a:2058-2062 pale violet red
    11315 
    11316 > color #1.2/a:2058-2062 deep pink
    11317 
    11318 > color #1.2/a:2058-2062 pale violet red
    11319 
    11320 > color #1.2/a:2580-2587 pale turquoise
    11321 
    11322 > color #1.2/a:2580-2587 light blue
    11323 
    11324 > color #1.2/a:2580-2587 aquamarine
    11325 
    11326 > color #1.2/a:2499-2507 green yellow
    11327 
    11328 > color #1.2/a:2607-2610 steel blue
    11329 
    11330 > color #1.2/e:55-73 dark green
    11331 
    11332 > save /Users/dalar193/Desktop/image86.png supersample 3
    11333 
    11334 > view name del9_overview
    11335 
    11336 > view name del9_PTC_overview
    11337 
    11338 > show #!6.1 models
    11339 
    11340 > hide #!6.1 models
    11341 
    11342 > color #6.* grey
    11343 
    11344 > color #6.*/Y indigo
    11345 
    11346 > color #6.*/Z blue
    11347 
    11348 > color #6.*/v sienna
    11349 
    11350 > color #6.*/a:2058-2062 pale violet red
    11351 
    11352 > color #6.*/a:2447-2453 coral
    11353 
    11354 > color #6.*/a:2499-2507 green yellow
    11355 
    11356 > color #6.*/a:2580-2587 aquamarine
    11357 
    11358 > color #6.*/a:2607-2610 steel blue
    11359 
    11360 > color #6.*/e:55-73 dark green
    11361 
    11362 > hide #!1.2 models
    11363 
    11364 > show #!6.1 models
    11365 
    11366 > hide #!6.1 models
    11367 
    11368 > show #!6.1 models
    11369 
    11370 > show #!1.12 models
    11371 
    11372 > show #!6.2 models
    11373 
    11374 > hide #!6.1 models
    11375 
    11376 > show #!6.3 models
    11377 
    11378 > hide #!6.2 models
    11379 
    11380 > show #!6.4 models
    11381 
    11382 > hide #!6.3 models
    11383 
    11384 > show #!6.5 models
    11385 
    11386 > hide #!6.4 models
    11387 
    11388 > show #!6.6 models
    11389 
    11390 > hide #!6.5 models
    11391 
    11392 > show #!6.7 models
    11393 
    11394 > hide #!6.6 models
    11395 
    11396 > show #!6.8 models
    11397 
    11398 > hide #!6.7 models
    11399 
    11400 > show #!6.9 models
    11401 
    11402 > hide #!6.8 models
    11403 
    11404 > show #!6.10 models
    11405 
    11406 > hide #!6.9 models
    11407 
    11408 > show #!1.2 models
    11409 
    11410 > hide #!6.10 models
    11411 
    11412 > view del9_PTC_overview
    11413 
    11414 > view name del9_PTC_overview
    11415 
    11416 > cartoon suppressBackboneDisplay true
    11417 
    11418 > cartoon suppressBackboneDisplay false
    11419 
    11420 > cartoon suppressBackboneDisplay true
    11421 
    11422 > save /Users/dalar193/Desktop/image87.png supersample 3
    11423 
    11424 > hide #!1.2 models
    11425 
    11426 > show #!1.2 models
    11427 
    11428 > show #!1.1 models
    11429 
    11430 > hide #!1.1 models
    11431 
    11432 > hide #!1.2 models
    11433 
    11434 > show #!1.1 models
    11435 
    11436 > hide #!1.1 models
    11437 
    11438 > show #!1.2 models
    11439 
    11440 > hide #!1.12 models
    11441 
    11442 > show #!1.12 models
    11443 
    11444 > hide #!1.12 models
    11445 
    11446 > save /Users/dalar193/Desktop/image88.png supersample 3
    11447 
    11448 > hide #!1.2 models
    11449 
    11450 > show #!1.12 models
    11451 
    11452 > show #!6.1 models
    11453 
    11454 > show #!6.2 models
    11455 
    11456 > hide #!6.2 models
    11457 
    11458 > show #!6.2 models
    11459 
    11460 > hide #!6.2 models
    11461 
    11462 > show #!6.2 models
    11463 
    11464 > hide #!6.1 models
    11465 
    11466 > show #!6.3 models
    11467 
    11468 > hide #!6.2 models
    11469 
    11470 > show #!6.4 models
    11471 
    11472 > hide #!6.3 models
    11473 
    11474 > view del9_PTC_overview
    11475 
    11476 > show #!6.5 models
    11477 
    11478 > hide #!6.4 models
    11479 
    11480 > show #!6.6 models
    11481 
    11482 > hide #!6.5 models
    11483 
    11484 > show #!6.7 models
    11485 
    11486 > hide #!6.6 models
    11487 
    11488 > hide #!6.7 models
    11489 
    11490 > show #!6.7 models
    11491 
    11492 > hide #!6.7 models
    11493 
    11494 > hide #!1.12 models
    11495 
    11496 > show #!1.2 models
    11497 
    11498 > viewport 600, 600
    11499 
    11500 Unknown command: viewport 600, 600 
    11501 
    11502 > viewport 600 600
    11503 
    11504 Unknown command: viewport 600 600 
    11505 
    11506 > windowsize 600 600
    11507 
    11508 > view name del9_PTC_overview
    11509 
    11510 > hide #!1.2 models
    11511 
    11512 > graphics quality 6
    11513 
    11514 > show #!1.2 models
    11515 
    11516 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_8emm.png height
    11517 > 600 width 600 supersample 3
    11518 
    11519 > hide #!1.2 models
    11520 
    11521 > show #!1.5 models
    11522 
    11523 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_8b0x.png height
    11524 > 600 width 600 supersample 3
    11525 
    11526 > hide #!1.5 models
    11527 
    11528 > show #!1.7 models
    11529 
    11530 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_8cgk.png height
    11531 > 600 width 600 supersample 3
    11532 
    11533 > hide #!1.7 models
    11534 
    11535 > show #!1.9 models
    11536 
    11537 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_7bv8.png height
    11538 > 600 width 600 supersample 3
    11539 
    11540 > hide #!1.9 models
    11541 
    11542 > show #!1.11 models
    11543 
    11544 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_7o1a.png height
    11545 > 600 width 600 supersample 3
    11546 
    11547 > hide #!1.11 models
    11548 
    11549 > show #!6.10 models
    11550 
    11551 > show #!1.12 models
    11552 
    11553 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d9_J83_cl0.png
    11554 > height 600 width 600 supersample 3
    11555 
    11556 > hide #!6.10 models
    11557 
    11558 > hide #!1.12 models
    11559 
    11560 > show #!6.1 models
    11561 
    11562 > show #!1.12 models
    11563 
    11564 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d9_J84_cl1.png
    11565 > height 600 width 600 supersample 3
    11566 
    11567 > hide #!6.1 models
    11568 
    11569 > hide #!1.12 models
    11570 
    11571 > show #!6.2 models
    11572 
    11573 > show #!1.12 models
    11574 
    11575 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d9_J85_cl2.png
    11576 > height 600 width 600 supersample 3
    11577 
    11578 > hide #!6.2 models
    11579 
    11580 > hide #!1.12 models
    11581 
    11582 > show #!6.3 models
    11583 
    11584 > show #!1.12 models
    11585 
    11586 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d9_J86_cl3.png
    11587 > height 600 width 600 supersample 3
    11588 
    11589 > hide #!6.3 models
    11590 
    11591 > hide #!1.12 models
    11592 
    11593 > show #!6.4 models
    11594 
    11595 > show #!1.12 models
    11596 
    11597 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d9_J87_cl4.png
    11598 > height 600 width 600 supersample 3
    11599 
    11600 > hide #!6.4 models
    11601 
    11602 > hide #!1.12 models
    11603 
    11604 > show #!6.5 models
    11605 
    11606 > show #!1.12 models
    11607 
    11608 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d9_J88_cl5.png
    11609 > height 600 width 600 supersample 3
    11610 
    11611 > hide #!6.5 models
    11612 
    11613 > hide #!1.12 models
    11614 
    11615 > show #!6.6 models
    11616 
    11617 > show #!1.12 models
    11618 
    11619 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d9_J89_cl6.png
    11620 > height 600 width 600 supersample 3
    11621 
    11622 > hide #!6.6 models
    11623 
    11624 > hide #!1.12 models
    11625 
    11626 > show #!6.7 models
    11627 
    11628 > show #!1.12 models
    11629 
    11630 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d9_J90_cl7.png
    11631 > height 600 width 600 supersample 3
    11632 
    11633 > hide #!6.7 models
    11634 
    11635 > hide #!1.12 models
    11636 
    11637 > show #!6.8 models
    11638 
    11639 > show #!1.12 models
    11640 
    11641 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d9_J91_cl8.png
    11642 > height 600 width 600 supersample 3
    11643 
    11644 > hide #!6.8 models
    11645 
    11646 > hide #!1.12 models
    11647 
    11648 > show #!6.9 models
    11649 
    11650 > show #!1.12 models
    11651 
    11652 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d9_J92_cl9.png
    11653 > height 600 width 600 supersample 3
    11654 
    11655 > hide #!6.9 models
    11656 
    11657 > hide #!1.12 models
    11658 
    11659 > show #!14.10 models
    11660 
    11661 > show #!1.12 models
    11662 
    11663 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d10_J53_c0.png
    11664 > height 600 width 600 supersample 3
    11665 
    11666 > hide #!14.10 models
    11667 
    11668 > hide #!1.12 models
    11669 
    11670 > show #!14.1 models
    11671 
    11672 > show #!1.12 models
    11673 
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    12320 
    12321 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d10_J55_c2.png
    12322 > height 600 width 600 supersample 3
    12323 
    12324 > hide #!14.2 models
    12325 
    12326 > hide #!1.12 models
    12327 
    12328 > show #!14.3 models
    12329 
    12330 > show #!1.12 models
    12331 
    12332 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d10_J56_c3.png
    12333 > height 600 width 600 supersample 3
    12334 
    12335 > hide #!14.3 models
    12336 
    12337 > hide #!1.12 models
    12338 
    12339 > show #!14.4 models
    12340 
    12341 > show #!1.12 models
    12342 
    12343 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d10_J57_c4.png
    12344 > height 600 width 600 supersample 3
    12345 
    12346 > hide #!14.4 models
    12347 
    12348 > hide #!1.12 models
    12349 
    12350 > show #!14.5 models
    12351 
    12352 > show #!1.12 models
    12353 
    12354 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d10_J58_c5.png
    12355 > height 600 width 600 supersample 3
    12356 
    12357 > hide #!14.5 models
    12358 
    12359 > hide #!1.12 models
    12360 
    12361 > show #!14.6 models
    12362 
    12363 > show #!1.12 models
    12364 
    12365 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d10_J59_c6.png
    12366 > height 600 width 600 supersample 3
    12367 
    12368 > hide #!14.6 models
    12369 
    12370 > hide #!1.12 models
    12371 
    12372 > show #!14.7 models
    12373 
    12374 > show #!1.12 models
    12375 
    12376 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d10_J60_c7.png
    12377 > height 600 width 600 supersample 3
    12378 
    12379 > hide #!14.7 models
    12380 
    12381 > hide #!1.12 models
    12382 
    12383 > show #!14.8 models
    12384 
    12385 > show #!1.12 models
    12386 
    12387 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d10_J61_c8.png
    12388 > height 600 width 600 supersample 3
    12389 
    12390 > hide #!14.8 models
    12391 
    12392 > hide #!1.12 models
    12393 
    12394 > show #!14.9 models
    12395 
    12396 > show #!1.12 models
    12397 
    12398 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d10_J62_c9.png
    12399 > height 600 width 600 supersample 3
    12400 
    12401 > hide #!14.9 models
    12402 
    12403 > hide #!1.12 models
    12404 
    12405 > show #!22.1 models
    12406 
    12407 > show #!1.12 models
    12408 
    12409 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_dE_J111_ape.png
    12410 > height 600 width 600 supersample 3
    12411 
    12412 > hide #!22.1 models
    12413 
    12414 > hide #!1.12 models
    12415 
    12416 > show #!22.2 models
    12417 
    12418 > show #!1.12 models
    12419 
    12420 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_dE_J112_ap.png
    12421 > height 600 width 600 supersample 3
    12422 
    12423 > hide #!22.2 models
    12424 
    12425 > hide #!1.12 models
    12426 
    12427 > show #!22.3 models
    12428 
    12429 > show #!1.12 models
    12430 
    12431 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_dE_J113_pe.png
    12432 > height 600 width 600 supersample 3
    12433 
    12434 > hide #!22.3 models
    12435 
    12436 > hide #!1.12 models
    12437 
    12438 > show #!22.4 models
    12439 
    12440 > show #!1.12 models
    12441 
    12442 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_dE_J124_e.png
    12443 > height 600 width 600 supersample 3
    12444 
    12445 > hide #!22.4 models
    12446 
    12447 > hide #!1.12 models
    12448 
    12449 > graphics quality 1
    12450 
    12451 > show #!1.1 models
    12452 
    12453 > volume style surface
    12454 
    12455 > windowsize 600 400
    12456 
    12457 > windowsize 1200 1200
    12458 
    12459 > save /Users/dalar193/Desktop/image89.png supersample 3
    12460 
    12461 > windowsize 600 600
    12462 
    12463 > save /Users/dalar193/Desktop/image90.png supersample 3
    12464 
    12465 > view orient
    12466 
    12467 > windowsize 600 600
    12468 
    12469 > save /Users/dalar193/Desktop/image91.png supersample 3
    12470 
    12471 > windowsize 600 400
    12472 
    12473 > view name ssu_rotation
    12474 
    12475 > show #!2.1 models
    12476 
    12477 > hide #!2.1 models
    12478 
    12479 > show #!2.1 models
    12480 
    12481 > hide #!2.1 models
    12482 
    12483 > hide #!1.1 models
    12484 
    12485 > show #!2.1 models
    12486 
    12487 > hide #!2.1 models
    12488 
    12489 > show #!2.2 models
    12490 
    12491 > hide #!2.2 models
    12492 
    12493 > show #!2.3 models
    12494 
    12495 > hide #!2.3 models
    12496 
    12497 > show #!2.3 models
    12498 
    12499 > hide #!2.3 models
    12500 
    12501 > show #!2.4 models
    12502 
    12503 > hide #!2.4 models
    12504 
    12505 > show #!1.1 models
    12506 
    12507 > color #1.1 #800002ff models
    12508 
    12509 > show #!2.1 models
    12510 
    12511 > hide #!2.1 models
    12512 
    12513 > show #!2.1 models
    12514 
    12515 > hide #!2.1 models
    12516 
    12517 > show #!2.2 models
    12518 
    12519 > hide #!2.2 models
    12520 
    12521 > show #!2.3 models
    12522 
    12523 > hide #!2.3 models
    12524 
    12525 > show #!2.4 models
    12526 
    12527 > hide #!2.4 models
    12528 
    12529 > show #!2.5 models
    12530 
    12531 > hide #!2.5 models
    12532 
    12533 > show #!2.6 models
    12534 
    12535 > hide #!2.6 models
    12536 
    12537 > volume #1.1 level 0.006000
    12538 
    12539 > volume #1.3 level 0.160000
    12540 
    12541 > volume #1.6 level 0.004000
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    12543 > volume #1.8 level 0.064000
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    12545 > volume #1.10 level 0.010000
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    12547 > volume #2.2 level 0.010000
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    12549 > volume #2.3 level 0.010000
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    12551 > volume #2.4 level 0.010000
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    12553 > volume #2.5 level 0.010000
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    12555 > volume #2.6 level 0.010000
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    12557 > volume #3.2 level 0.032000
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    12559 > volume #3.3 level 0.032000
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    12561 > volume #3.4 level 0.032000
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    12563 > volume #3.5 level 0.032000
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    12565 > volume #3.6 level 0.032000
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    12567 > volume #4.10 level 0.320000
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    12569 > volume #4.1 level 0.320000
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    12571 > volume #4.2 level 0.320000
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    12573 > volume #4.3 level 0.320000
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    12575 > volume #4.4 level 0.320000
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    12577 > volume #4.5 level 0.320000
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    12579 > volume #4.6 level 0.320000
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    12583 > volume #4.8 level 0.320000
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    12585 > volume #4.9 level 0.320000
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    12587 > volume #5.10 level 0.440000
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    12589 > volume #5.1 level 0.440000
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    12591 > volume #5.2 level 0.440000
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    12593 > volume #5.3 level 0.440000
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    12595 > volume #5.4 level 0.440000
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    12597 > volume #5.5 level 0.440000
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    12599 > volume #5.6 level 0.440000
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    12601 > volume #5.7 level 0.440000
    12602 
    12603 > volume #5.8 level 0.440000
    12604 
    12605 > volume #5.9 level 0.440000
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    12607 > volume #10.1 level 0.010000
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    12609 > volume #10.2 level 0.010000
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    12611 > volume #10.3 level 0.010000
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    12613 > volume #11.1 level 0.032000
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    12615 > volume #11.2 level 0.032000
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    12617 > volume #11.3 level 0.032000
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    12619 > volume #12.10 level 0.320000
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    12621 > volume #12.1 level 0.320000
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    12623 > volume #12.2 level 0.320000
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    12625 > volume #12.3 level 0.320000
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    12627 > volume #12.4 level 0.320000
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    12629 > volume #12.5 level 0.320000
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    12631 > volume #12.6 level 0.320000
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    12633 > volume #12.7 level 0.320000
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    12635 > volume #12.8 level 0.320000
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    12637 > volume #12.9 level 0.320000
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    12639 > volume #13.10 level 0.440000
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    12641 > volume #13.1 level 0.440000
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    12643 > volume #13.2 level 0.440000
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    12645 > volume #13.3 level 0.440000
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    12647 > volume #13.4 level 0.440000
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    12649 > volume #13.5 level 0.440000
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    12651 > volume #13.6 level 0.440000
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    12653 > volume #13.7 level 0.440000
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    12655 > volume #13.8 level 0.440000
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    12657 > volume #13.9 level 0.440000
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    12659 > volume #20.1 level 0.120000
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    12661 > volume #20.2 level 0.120000
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    12663 > volume #20.3 level 0.120000
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    12665 > volume #20.4 level 0.120000
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    12667 > volume #21.1 level 0.160000
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    12669 > volume #21.2 level 0.160000
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    12671 > volume #21.3 level 0.160000
    12672 
    12673 > volume #21.4 level 0.160000
    12674 
    12675 > hide #!1.1 models
    12676 
    12677 > show #!1.1 models
    12678 
    12679 > hide #!1.1 models
    12680 
    12681 > show #!1.1 models
    12682 
    12683 > show #!2.1 models
    12684 
    12685 > hide #!1.1 models
    12686 
    12687 > show #!1.1 models
    12688 
    12689 > hide #!1.1 models
    12690 
    12691 > show #!2.2 models
    12692 
    12693 > hide #!2.1 models
    12694 
    12695 > show #!2.3 models
    12696 
    12697 > hide #!2.2 models
    12698 
    12699 > show #!2.4 models
    12700 
    12701 > hide #!2.3 models
    12702 
    12703 > show #!2.1 models
    12704 
    12705 > hide #!2.4 models
    12706 
    12707 > show #!2.4 models
    12708 
    12709 > hide #!2.1 models
    12710 
    12711 > show #!2.5 models
    12712 
    12713 > hide #!2.4 models
    12714 
    12715 > show #!2.6 models
    12716 
    12717 > hide #!2.5 models
    12718 
    12719 > show #!1.1 models
    12720 
    12721 > hide #!1.1 models
    12722 
    12723 > hide #!2.6 models
    12724 
    12725 > show #!3.1 models
    12726 
    12727 > hide #!3.1 models
    12728 
    12729 > show #!4.1 models
    12730 
    12731 > hide #!4.1 models
    12732 
    12733 > show #!4.2 models
    12734 
    12735 > hide #!4.2 models
    12736 
    12737 > color #1.1 gray
    12738 
    12739 > color #1.3 sea green
    12740 
    12741 > color #1.6 sea green
    12742 
    12743 > color #1.8 sea green
    12744 
    12745 > color #1.10 sea green
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    12747 > color #2.2 sea green
    12748 
    12749 > color #2.3 sea green
    12750 
    12751 > color #2.4 sea green
    12752 
    12753 > color #2.5 sea green
    12754 
    12755 > color #2.6 sea green
    12756 
    12757 > color #4.10 sea green
    12758 
    12759 > color #4.1 sea green
    12760 
    12761 > color #4.2 sea green
    12762 
    12763 > color #4.3 sea green
    12764 
    12765 > color #4.4 sea green
    12766 
    12767 > color #4.5 sea green
    12768 
    12769 > color #4.6 sea green
    12770 
    12771 > color #4.7 sea green
    12772 
    12773 > color #4.8 sea green
    12774 
    12775 > color #4.9 sea green
    12776 
    12777 > color #10.1 sea green
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    12779 > color #10.2 sea green
    12780 
    12781 > color #10.3 sea green
    12782 
    12783 > color #12.1 sea green
    12784 
    12785 [Repeated 1 time(s)]
    12786 
    12787 > color #12.2 sea green
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    12789 > color #12.3 sea green
    12790 
    12791 > color #12.4 sea green
    12792 
    12793 > color #12.5 sea green
    12794 
    12795 > color #12.6 sea green
    12796 
    12797 > color #12.7 sea green
    12798 
    12799 > color #12.8 sea green
    12800 
    12801 > color #12.9 sea green
    12802 
    12803 > color #20.1 sea green
    12804 
    12805 > color #20.2 sea green
    12806 
    12807 > color #20.3 sea green
    12808 
    12809 > color #20.4 sea green
    12810 
    12811 > show #!1.1 models
    12812 
    12813 > show #!2.2 models
    12814 
    12815 > hide #!2.2 models
    12816 
    12817 > show #!2.3 models
    12818 
    12819 > hide #!2.3 models
    12820 
    12821 > show #!2.4 models
    12822 
    12823 > hide #!2.4 models
    12824 
    12825 > show #!2.5 models
    12826 
    12827 > hide #!2.5 models
    12828 
    12829 > show #!2.6 models
    12830 
    12831 > hide #!2.6 models
    12832 
    12833 > show #!2.5 models
    12834 
    12835 > hide #!2.5 models
    12836 
    12837 > show #!2.4 models
    12838 
    12839 > hide #!2.4 models
    12840 
    12841 > show #!2.3 models
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    12843 > hide #!2.3 models
    12844 
    12845 > show #!2.2 models
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    12847 > hide #!2.2 models
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    12849 > show #!2.2 models
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    12851 > hide #!2.2 models
    12852 
    12853 > show #!2.3 models
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    12855 > hide #!2.3 models
    12856 
    12857 > show #!2.4 models
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    12859 > hide #!2.4 models
    12860 
    12861 > show #!2.4 models
    12862 
    12863 > hide #!2.4 models
    12864 
    12865 > show #!2.5 models
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    12867 > hide #!2.5 models
    12868 
    12869 > show #!2.6 models
    12870 
    12871 > hide #!2.6 models
    12872 
    12873 > hide #!1.1 models
    12874 
    12875 > show #!1.3 models
    12876 
    12877 > show #!1.1 models
    12878 
    12879 > hide #!1.1 models
    12880 
    12881 > show #!1.1 models
    12882 
    12883 > show #!1.6 models
    12884 
    12885 > hide #!1.3 models
    12886 
    12887 > hide #!1.6 models
    12888 
    12889 > show #!1.6 models
    12890 
    12891 > hide #!1.6 models
    12892 
    12893 > show #!1.8 models
    12894 
    12895 > hide #!1.8 models
    12896 
    12897 > show #!1.10 models
    12898 
    12899 > hide #!1.10 models
    12900 
    12901 > show #!1.10 models
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    12903 > hide #!1.10 models
    12904 
    12905 > hide #!1.1 models
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    12907 > show #!1.1 models
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    12909 > hide #!1.1 models
    12910 
    12911 > show #!1.1 models
    12912 
    12913 > hide #!1.1 models
    12914 
    12915 > show #!1.10 models
    12916 
    12917 > color #1.10 gray
    12918 
    12919 > show #!2.1 models
    12920 
    12921 > hide #!2.1 models
    12922 
    12923 > show #!2.2 models
    12924 
    12925 > hide #!2.2 models
    12926 
    12927 > show #!2.2 models
    12928 
    12929 > hide #!2.2 models
    12930 
    12931 > show #!2.3 models
    12932 
    12933 > hide #!2.3 models
    12934 
    12935 > show #!2.4 models
    12936 
    12937 > hide #!2.4 models
    12938 
    12939 > show #!2.5 models
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    12941 > hide #!2.5 models
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    12943 > show #!2.5 models
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    12945 > hide #!2.5 models
    12946 
    12947 > show #!2.6 models
    12948 
    12949 > show #!2.2 models
    12950 
    12951 > hide #!2.6 models
    12952 
    12953 > show #!2.6 models
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    12955 > hide #!2.6 models
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    12957 > show #!2.6 models
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    12959 > hide #!2.6 models
    12960 
    12961 > show #!2.6 models
    12962 
    12963 > hide #!2.6 models
    12964 
    12965 > show #!2.6 models
    12966 
    12967 > hide #!2.6 models
    12968 
    12969 > hide #!2.2 models
    12970 
    12971 > show #!11.1 models
    12972 
    12973 > hide #!11.1 models
    12974 
    12975 > show #!10.1 models
    12976 
    12977 > hide #!10.1 models
    12978 
    12979 > show #!10.2 models
    12980 
    12981 > hide #!10.2 models
    12982 
    12983 > show #!10.2 models
    12984 
    12985 > hide #!10.2 models
    12986 
    12987 > show #!10.2 models
    12988 
    12989 > hide #!10.2 models
    12990 
    12991 > show #!10.3 models
    12992 
    12993 > hide #!10.3 models
    12994 
    12995 > show #!10.3 models
    12996 
    12997 > hide #!10.3 models
    12998 
    12999 > show #!10.3 models
    13000 
    13001 > hide #!10.3 models
    13002 
    13003 > show #!10.1 models
    13004 
    13005 > hide #!10.1 models
    13006 
    13007 > show #!10.1 models
    13008 
    13009 > hide #!10.1 models
    13010 
    13011 > show #!10.1 models
    13012 
    13013 > hide #!10.1 models
    13014 
    13015 > hide #!1.10 models
    13016 
    13017 > show #!1.2 models
    13018 
    13019 > hide #!1.2 models
    13020 
    13021 > show #!1.1 models
    13022 
    13023 > show #!2.2 models
    13024 
    13025 > hide #!2.2 models
    13026 
    13027 > show #!2.2 models
    13028 
    13029 > hide #!2.2 models
    13030 
    13031 > show #!2.3 models
    13032 
    13033 > hide #!2.3 models
    13034 
    13035 > show #!2.4 models
    13036 
    13037 > hide #!2.4 models
    13038 
    13039 > show #!2.5 models
    13040 
    13041 > hide #!2.5 models
    13042 
    13043 > show #!2.5 models
    13044 
    13045 > show #!2.6 models
    13046 
    13047 > hide #!2.5 models
    13048 
    13049 > hide #!2.6 models
    13050 
    13051 > show #!2.6 models
    13052 
    13053 > hide #!2.6 models
    13054 
    13055 > show #!2.6 models
    13056 
    13057 > hide #!2.6 models
    13058 
    13059 > show #!4.1 models
    13060 
    13061 > hide #!4.1 models
    13062 
    13063 > show #!4.2 models
    13064 
    13065 > hide #!4.2 models
    13066 
    13067 > show #!4.3 models
    13068 
    13069 > hide #!4.3 models
    13070 
    13071 > show #!10.1 models
    13072 
    13073 > hide #!10.1 models
    13074 
    13075 > show #!10.2 models
    13076 
    13077 > hide #!10.2 models
    13078 
    13079 > show #!10.3 models
    13080 
    13081 > hide #!10.3 models
    13082 
    13083 > show #!10.3 models
    13084 
    13085 > hide #!10.3 models
    13086 
    13087 > show #!10.3 models
    13088 
    13089 > show #!20.1 models
    13090 
    13091 > hide #!10.3 models
    13092 
    13093 > hide #!20.1 models
    13094 
    13095 > show #!20.1 models
    13096 
    13097 > hide #!20.1 models
    13098 
    13099 > show #!20.2 models
    13100 
    13101 > hide #!20.2 models
    13102 
    13103 > show #!20.2 models
    13104 
    13105 > hide #!20.2 models
    13106 
    13107 > show #!20.3 models
    13108 
    13109 > hide #!20.3 models
    13110 
    13111 > show #!20.3 models
    13112 
    13113 > hide #!20.3 models
    13114 
    13115 > show #!20.4 models
    13116 
    13117 > hide #!20.4 models
    13118 
    13119 > volume #20.1 level 0.150000
    13120 
    13121 > volume #20.2 level 0.150000
    13122 
    13123 > volume #20.3 level 0.150000
    13124 
    13125 > volume #20.4 level 0.150000
    13126 
    13127 > show #!20.1 models
    13128 
    13129 > hide #!20.1 models
    13130 
    13131 > volume #1.1 level 0.010
    13132 
    13133 > volume #1.1 level 0.008
    13134 
    13135 > hide #!1.1 models
    13136 
    13137 > show #!1.1 models
    13138 
    13139 > show #!1.3 models
    13140 
    13141 > hide #!1.3 models
    13142 
    13143 > show #!1.3 models
    13144 
    13145 > hide #!1.3 models
    13146 
    13147 > show #!1.6 models
    13148 
    13149 > hide #!1.6 models
    13150 
    13151 > show #!1.8 models
    13152 
    13153 > hide #!1.8 models
    13154 
    13155 > show #!1.10 models
    13156 
    13157 > hide #!1.10 models
    13158 
    13159 > show #!1.10 models
    13160 
    13161 > hide #!1.10 models
    13162 
    13163 > show #!1.3 models
    13164 
    13165 > hide #!1.3 models
    13166 
    13167 > show #!1.3 models
    13168 
    13169 > hide #!1.3 models
    13170 
    13171 > volume #1.3 level 0.180000
    13172 
    13173 > show #!1.3 models
    13174 
    13175 > hide #!1.3 models
    13176 
    13177 > show #!1.3 models
    13178 
    13179 > hide #!1.3 models
    13180 
    13181 > show #!1.3 models
    13182 
    13183 > hide #!1.3 models
    13184 
    13185 > show #!1.3 models
    13186 
    13187 > hide #!1.3 models
    13188 
    13189 > show #!1.3 models
    13190 
    13191 > hide #!1.3 models
    13192 
    13193 > show #!1.3 models
    13194 
    13195 > hide #!1.3 models
    13196 
    13197 > show #!1.3 models
    13198 
    13199 > hide #!1.3 models
    13200 
    13201 > show #!1.3 models
    13202 
    13203 > hide #!1.3 models
    13204 
    13205 > show #!1.3 models
    13206 
    13207 > volume #1.3 level 0.190000
    13208 
    13209 > color #1.6 #8b8b8bff models
    13210 
    13211 > hide #!1.3 models
    13212 
    13213 > show #!1.8 models
    13214 
    13215 > hide #!1.1 models
    13216 
    13217 > show #!1.1 models
    13218 
    13219 > hide #!1.8 models
    13220 
    13221 > color #1.8 #8b8b8bff models
    13222 
    13223 > show #!1.10 models
    13224 
    13225 > hide #!1.1 models
    13226 
    13227 > volume #1.10 level 0.008
    13228 
    13229 > volume #1.10 level 0.012
    13230 
    13231 > volume #1.10 level 0.011
    13232 
    13233 > show #!1.1 models
    13234 
    13235 > hide #!1.10 models
    13236 
    13237 > show #!1.10 models
    13238 
    13239 > hide #!1.10 models
    13240 
    13241 > show #!1.10 models
    13242 
    13243 > hide #!1.10 models
    13244 
    13245 > show #!1.10 models
    13246 
    13247 > hide #!1.10 models
    13248 
    13249 > show #!1.10 models
    13250 
    13251 > hide #!1.10 models
    13252 
    13253 > show #!2.2 models
    13254 
    13255 > hide #!2.2 models
    13256 
    13257 > show #!2.2 models
    13258 
    13259 > hide #!2.2 models
    13260 
    13261 > show #!2.2 models
    13262 
    13263 > hide #!2.2 models
    13264 
    13265 > show #!2.2 models
    13266 
    13267 > hide #!2.2 models
    13268 
    13269 > show #!2.2 models
    13270 
    13271 > hide #!2.2 models
    13272 
    13273 > volume #2.2 level 0.012
    13274 
    13275 > volume #2.3 level 0.012
    13276 
    13277 > volume #2.4 level 0.012
    13278 
    13279 > volume #2.5 level 0.012
    13280 
    13281 > volume #2.6 level 0.012
    13282 
    13283 > show #!2.2 models
    13284 
    13285 > hide #!2.2 models
    13286 
    13287 > show #!2.2 models
    13288 
    13289 > hide #!2.2 models
    13290 
    13291 > show #!2.3 models
    13292 
    13293 > hide #!2.3 models
    13294 
    13295 > show #!2.4 models
    13296 
    13297 > hide #!2.4 models
    13298 
    13299 > show #!2.5 models
    13300 
    13301 > hide #!2.5 models
    13302 
    13303 > show #!2.6 models
    13304 
    13305 > hide #!2.6 models
    13306 
    13307 > show #!2.6 models
    13308 
    13309 > hide #!2.6 models
    13310 
    13311 > show #!2.6 models
    13312 
    13313 > hide #!2.6 models
    13314 
    13315 > show #!2.6 models
    13316 
    13317 > show #!2.2 models
    13318 
    13319 > hide #!2.2 models
    13320 
    13321 > show #!2.2 models
    13322 
    13323 > hide #!2.2 models
    13324 
    13325 > hide #!2.6 models
    13326 
    13327 > show #!2.2 models
    13328 
    13329 > hide #!2.2 models
    13330 
    13331 > show #!2.3 models
    13332 
    13333 > hide #!2.3 models
    13334 
    13335 > show #!2.4 models
    13336 
    13337 > hide #!2.4 models
    13338 
    13339 > show #!2.5 models
    13340 
    13341 > hide #!2.5 models
    13342 
    13343 > show #!2.5 models
    13344 
    13345 > hide #!2.5 models
    13346 
    13347 > show #!2.5 models
    13348 
    13349 > hide #!2.5 models
    13350 
    13351 > show #!2.6 models
    13352 
    13353 > hide #!2.6 models
    13354 
    13355 > show #!2.6 models
    13356 
    13357 > hide #!2.6 models
    13358 
    13359 > show #!2.6 models
    13360 
    13361 > hide #!2.6 models
    13362 
    13363 > show #!2.6 models
    13364 
    13365 > hide #!2.6 models
    13366 
    13367 > show #!4.1 models
    13368 
    13369 > hide #!4.1 models
    13370 
    13371 > show #!4.1 models
    13372 
    13373 > volume #4.1 level 0.400
    13374 
    13375 > volume #4.10 level 0.400
    13376 
    13377 > volume #4.1 level 0.400
    13378 
    13379 > volume #4.2 level 0.400
    13380 
    13381 > volume #4.3 level 0.400
    13382 
    13383 > volume #4.4 level 0.400
    13384 
    13385 > volume #4.5 level 0.400
    13386 
    13387 > volume #4.6 level 0.400
    13388 
    13389 > volume #4.7 level 0.400
    13390 
    13391 > volume #4.8 level 0.400
    13392 
    13393 > volume #4.9 level 0.400
    13394 
    13395 > show #!4.2 models
    13396 
    13397 > hide #!4.1 models
    13398 
    13399 > show #!4.3 models
    13400 
    13401 > hide #!4.2 models
    13402 
    13403 > show #!4.4 models
    13404 
    13405 > hide #!4.3 models
    13406 
    13407 > show #!4.5 models
    13408 
    13409 > hide #!4.4 models
    13410 
    13411 > show #!4.6 models
    13412 
    13413 > hide #!4.5 models
    13414 
    13415 > show #!4.7 models
    13416 
    13417 > hide #!4.6 models
    13418 
    13419 > show #!4.8 models
    13420 
    13421 > hide #!4.7 models
    13422 
    13423 > show #!4.9 models
    13424 
    13425 > hide #!4.8 models
    13426 
    13427 > show #!4.10 models
    13428 
    13429 > hide #!4.9 models
    13430 
    13431 > hide #!4.10 models
    13432 
    13433 > show #!10.1 models
    13434 
    13435 > hide #!10.1 models
    13436 
    13437 > show #!10.1 models
    13438 
    13439 > volume #10.1 level 0.012
    13440 
    13441 > volume #10.1 level 0.011
    13442 
    13443 > hide #!10.1 models
    13444 
    13445 > show #!12.1 models
    13446 
    13447 > show #!4.1 models
    13448 
    13449 > hide #!4.1 models
    13450 
    13451 > show #!4.1 models
    13452 
    13453 > hide #!12.1 models
    13454 
    13455 > show #!12.1 models
    13456 
    13457 > hide #!4.1 models
    13458 
    13459 > volume #12.1 level 0.380
    13460 
    13461 > volume #12.1 level 0.360
    13462 
    13463 > hide #!12.1 models
    13464 
    13465 > show #!20.1 models
    13466 
    13467 > volume #20.1 level 0.20
    13468 
    13469 > volume #1.1 level 0.008
    13470 
    13471 > volume #1.3 level 0.190
    13472 
    13473 > volume #1.10 level 0.010
    13474 
    13475 > volume #2.2 level 0.012
    13476 
    13477 > volume #2.3 level 0.012
    13478 
    13479 > volume #2.4 level 0.012
    13480 
    13481 > volume #2.5 level 0.012
    13482 
    13483 > volume #2.6 level 0.012
    13484 
    13485 > volume #4.10 level 0.400
    13486 
    13487 > volume #4.1 level 0.400
    13488 
    13489 > volume #4.2 level 0.400
    13490 
    13491 > volume #4.3 level 0.400
    13492 
    13493 > volume #4.4 level 0.400
    13494 
    13495 > volume #4.5 level 0.400
    13496 
    13497 > volume #4.6 level 0.400
    13498 
    13499 > volume #4.7 level 0.400
    13500 
    13501 > volume #4.8 level 0.400
    13502 
    13503 > volume #4.9 level 0.400
    13504 
    13505 > volume #10.1 level 0.011
    13506 
    13507 > volume #10.2 level 0.011
    13508 
    13509 > volume #10.3 level 0.011
    13510 
    13511 > volume #12.10 level 0.360
    13512 
    13513 > volume #12.1 level 0.360
    13514 
    13515 > volume #12.2 level 0.360
    13516 
    13517 > volume #12.3 level 0.360
    13518 
    13519 > volume #12.4 level 0.360
    13520 
    13521 > volume #12.5 level 0.360
    13522 
    13523 > volume #12.6 level 0.360
    13524 
    13525 > volume #12.7 level 0.360
    13526 
    13527 > volume #12.8 level 0.360
    13528 
    13529 > volume #12.9 level 0.360
    13530 
    13531 > volume #20.1 level 0.200
    13532 
    13533 > volume #20.2 level 0.200
    13534 
    13535 > volume #20.3 level 0.200
    13536 
    13537 > volume #20.4 level 0.200
    13538 
    13539 > color #1.1 gray
    13540 
    13541 > color #1.3 sea green
    13542 
    13543 > color #1.6 sea green
    13544 
    13545 > color #1.8 sea green
    13546 
    13547 > color #1.10 sea green
    13548 
    13549 > color #2.2 sea green
    13550 
    13551 > color #2.3 sea green
    13552 
    13553 > color #2.4 sea green
    13554 
    13555 > color #2.5 sea green
    13556 
    13557 > color #2.6 sea green
    13558 
    13559 > color #4.10 sea green
    13560 
    13561 > color #4.1 sea green
    13562 
    13563 > color #4.2 sea green
    13564 
    13565 > color #4.3 sea green
    13566 
    13567 > color #4.4 sea green
    13568 
    13569 > color #4.5 sea green
    13570 
    13571 > color #4.6 sea green
    13572 
    13573 > color #4.7 sea green
    13574 
    13575 > color #4.8 sea green
    13576 
    13577 > color #4.9 sea green
    13578 
    13579 > color #10.1 sea green
    13580 
    13581 > color #10.2 sea green
    13582 
    13583 > color #10.3 sea green
    13584 
    13585 > color #12.1 sea green
    13586 
    13587 [Repeated 1 time(s)]
    13588 
    13589 > color #12.2 sea green
    13590 
    13591 > color #12.3 sea green
    13592 
    13593 > color #12.4 sea green
    13594 
    13595 > color #12.5 sea green
    13596 
    13597 > color #12.6 sea green
    13598 
    13599 > color #12.7 sea green
    13600 
    13601 > color #12.8 sea green
    13602 
    13603 > color #12.9 sea green
    13604 
    13605 > color #20.1 sea green
    13606 
    13607 > color #20.2 sea green
    13608 
    13609 > color #20.3 sea green
    13610 
    13611 > color #20.4 sea green
    13612 
    13613 > show #!1.10 models
    13614 
    13615 > hide #!1.10 models
    13616 
    13617 > view list
    13618 
    13619 Named views: 76A_sandwich, del9_PTC_overview, del9_overview, ssu_rotation 
    13620 
    13621 > view ssu_rotation
    13622 
    13623 > windowsize 600 300
    13624 
    13625 > view ssu_rotation
    13626 
    13627 > windowsize 600 400
    13628 
    13629 > graphics quality 6
    13630 
    13631 > show #!1.1 models
    13632 
    13633 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8emm_map_c2.png height 600
    13634 > width 400 supersample 3
    13635 
    13636 > hide #!1.1 models
    13637 
    13638 > show #!1.3 models
    13639 
    13640 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8b0x_map_c5.png height 600
    13641 > width 400 supersample 3
    13642 
    13643 > hide #!1.3 models
    13644 
    13645 > show #!1.10 models
    13646 
    13647 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_7o1a_map_c11.png height 600
    13648 > width 400 supersample 3
    13649 
    13650 > hide #!1.10 models
    13651 
    13652 > show #!2.2 models
    13653 
    13654 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape1_c1c2c4.png height 600
    13655 > width 400 supersample 3
    13656 
    13657 > hide #!2.2 models
    13658 
    13659 > show #!2.3 models
    13660 
    13661 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape2_c6.png height 600 width
    13662 > 400 supersample 3
    13663 
    13664 > hide #!2.3 models
    13665 
    13666 > show #!2.4 models
    13667 
    13668 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape3_c2c1c9c7.png height 600
    13669 > width 400 supersample 3
    13670 
    13671 > hide #!2.4 models
    13672 
    13673 > show #!2.5 models
    13674 
    13675 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_pe_c8c6c3.png height 600
    13676 > width 400 supersample 3
    13677 
    13678 > hide #!2.5 models
    13679 
    13680 > show #!2.6 models
    13681 
    13682 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_e_c0.png height 600 width
    13683 > 400 supersample 3
    13684 
    13685 > hide #!2.6 models
    13686 
    13687 > show #!4.10 models
    13688 
    13689 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J83_cl0_c0.png height 600
    13690 > width 400 supersample 3
    13691 
    13692 > hide #!4.10 models
    13693 
    13694 > show #!4.1 models
    13695 
    13696 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J84_cl1_c1.png height 600
    13697 > width 400 supersample 3
    13698 
    13699 > hide #!4.1 models
    13700 
    13701 > show #!4.2 models
    13702 
    13703 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J85_cl2_c2.png height 600
    13704 > width 400 supersample 3
    13705 
    13706 > hide #!4.2 models
    13707 
    13708 > show #!4.3 models
    13709 
    13710 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J86_cl3_c3.png height 600
    13711 > width 400 supersample 3
    13712 
    13713 > hide #!4.3 models
    13714 
    13715 > show #!4.4 models
    13716 
    13717 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J87_cl4_c4.png height 600
    13718 > width 400 supersample 3
    13719 
    13720 > hide #!4.4 models
    13721 
    13722 > show #!4.5 models
    13723 
    13724 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J88_cl5_c5.png height 600
    13725 > width 400 supersample 3
    13726 
    13727 > hide #!4.5 models
    13728 
    13729 > show #!4.6 models
    13730 
    13731 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J89_cl6_c6.png height 600
    13732 > width 400 supersample 3
    13733 
    13734 > hide #!4.6 models
    13735 
    13736 > show #!4.7 models
    13737 
    13738 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J90_cl7_c7.png height 600
    13739 > width 400 supersample 3
    13740 
    13741 > hide #!4.7 models
    13742 
    13743 > show #!4.8 models
    13744 
    13745 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J91_cl8_c8.png height 600
    13746 > width 400 supersample 3
    13747 
    13748 > hide #!4.8 models
    13749 
    13750 > show #!4.9 models
    13751 
    13752 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J92_cl9_c9.png height 600
    13753 > width 400 supersample 3
    13754 
    13755 > hide #!4.9 models
    13756 
    13757 > show #!10.1 models
    13758 
    13759 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_ape_c9c3c2c5c1.png height
    13760 > 600 width 400 supersample 3
    13761 
    13762 > hide #!10.1 models
    13763 
    13764 > show #!10.2 models
    13765 
    13766 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_pe_c6c7c8c1c5.png height
    13767 > 600 width 400 supersample 3
    13768 
    13769 > hide #!10.2 models
    13770 
    13771 > show #!10.3 models
    13772 
    13773 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_e_c0c1c5.png height 600
    13774 > width 400 supersample 3
    13775 
    13776 > hide #!10.3 models
    13777 
    13778 > show #!11.1 models
    13779 
    13780 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_ape_sharp_c9c3c2c5c1.png
    13781 > height 600 width 400 supersample 3
    13782 
    13783 > hide #!11.1 models
    13784 
    13785 > show #!11.2 models
    13786 
    13787 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_pe_sharp_c6c7c8c1c5.png
    13788 > height 600 width 400 supersample 3
    13789 
    13790 > hide #!11.2 models
    13791 
    13792 > show #!11.3 models
    13793 
    13794 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_e_sharp_c0c1c5.png height
    13795 > 600 width 400 supersample 3
    13796 
    13797 > hide #!11.3 models
    13798 
    13799 > show #!12.10 models
    13800 
    13801 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J53_c0_c0.png height 600
    13802 > width 400 supersample 3
    13803 
    13804 > hide #!12.10 models
    13805 
    13806 > show #!12.1 models
    13807 
    13808 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J54_c1_c1.png height 600
    13809 > width 400 supersample 3
    13810 
    13811 > hide #!12.1 models
    13812 
    13813 > show #!12.2 models
    13814 
    13815 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J55_c2_c2.png height 600
    13816 > width 400 supersample 3
    13817 
    13818 > hide #!12.2 models
    13819 
    13820 > show #!12.3 models
    13821 
    13822 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J56_c3_c3.png height 600
    13823 > width 400 supersample 3
    13824 
    13825 > hide #!12.3 models
    13826 
    13827 > show #!12.4 models
    13828 
    13829 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J57_c4_c4.png height 600
    13830 > width 400 supersample 3
    13831 
    13832 > hide #!12.4 models
    13833 
    13834 > show #!12.5 models
    13835 
    13836 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J58_c5_c5.png height 600
    13837 > width 400 supersample 3
    13838 
    13839 > hide #!12.5 models
    13840 
    13841 > show #!12.6 models
    13842 
    13843 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J59_c6_c6.png height 600
    13844 > width 400 supersample 3
    13845 
    13846 > hide #!12.6 models
    13847 
    13848 > show #!12.7 models
    13849 
    13850 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J60_c7_c7.png height 600
    13851 > width 400 supersample 3
    13852 
    13853 > hide #!12.7 models
    13854 
    13855 > show #!12.8 models
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    14447 > width 600 supersample 3
    14448 
    14449 > hide #!1.3 models
    14450 
    14451 > show #!1.10 models
    14452 
    14453 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_7o1a_map_c11.png height 400
    14454 > width 600 supersample 3
    14455 
    14456 > hide #!1.10 models
    14457 
    14458 > show #!2.2 models
    14459 
    14460 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape1_c1c2c4.png height 400
    14461 > width 600 supersample 3
    14462 
    14463 > hide #!2.2 models
    14464 
    14465 > show #!2.3 models
    14466 
    14467 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape2_c6.png height 400 width
    14468 > 600 supersample 3
    14469 
    14470 > hide #!2.3 models
    14471 
    14472 > show #!2.4 models
    14473 
    14474 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape3_c2c1c9c7.png height 400
    14475 > width 600 supersample 3
    14476 
    14477 > hide #!2.4 models
    14478 
    14479 > show #!2.5 models
    14480 
    14481 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_pe_c8c6c3.png height 400
    14482 > width 600 supersample 3
    14483 
    14484 > hide #!2.5 models
    14485 
    14486 > show #!2.6 models
    14487 
    14488 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_e_c0.png height 400 width
    14489 > 600 supersample 3
    14490 
    14491 > hide #!2.6 models
    14492 
    14493 > show #!4.10 models
    14494 
    14495 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J83_cl0_c0.png height 400
    14496 > width 600 supersample 3
    14497 
    14498 > hide #!4.10 models
    14499 
    14500 > show #!4.1 models
    14501 
    14502 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J84_cl1_c1.png height 400
    14503 > width 600 supersample 3
    14504 
    14505 > hide #!4.1 models
    14506 
    14507 > show #!4.2 models
    14508 
    14509 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J85_cl2_c2.png height 400
    14510 > width 600 supersample 3
    14511 
    14512 > hide #!4.2 models
    14513 
    14514 > show #!4.3 models
    14515 
    14516 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J86_cl3_c3.png height 400
    14517 > width 600 supersample 3
    14518 
    14519 > hide #!4.3 models
    14520 
    14521 > show #!4.4 models
    14522 
    14523 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J87_cl4_c4.png height 400
    14524 > width 600 supersample 3
    14525 
    14526 > hide #!4.4 models
    14527 
    14528 > show #!4.5 models
    14529 
    14530 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J88_cl5_c5.png height 400
    14531 > width 600 supersample 3
    14532 
    14533 > hide #!4.5 models
    14534 
    14535 > show #!4.6 models
    14536 
    14537 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J89_cl6_c6.png height 400
    14538 > width 600 supersample 3
    14539 
    14540 > hide #!4.6 models
    14541 
    14542 > show #!4.7 models
    14543 
    14544 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J90_cl7_c7.png height 400
    14545 > width 600 supersample 3
    14546 
    14547 > hide #!4.7 models
    14548 
    14549 > show #!4.8 models
    14550 
    14551 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J91_cl8_c8.png height 400
    14552 > width 600 supersample 3
    14553 
    14554 > hide #!4.8 models
    14555 
    14556 > show #!4.9 models
    14557 
    14558 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J92_cl9_c9.png height 400
    14559 > width 600 supersample 3
    14560 
    14561 > hide #!4.9 models
    14562 
    14563 > show #!10.1 models
    14564 
    14565 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_ape_c9c3c2c5c1.png height
    14566 > 400 width 600 supersample 3
    14567 
    14568 > hide #!10.1 models
    14569 
    14570 > show #!10.2 models
    14571 
    14572 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_pe_c6c7c8c1c5.png height
    14573 > 400 width 600 supersample 3
    14574 
    14575 > hide #!10.2 models
    14576 
    14577 > show #!10.3 models
    14578 
    14579 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_e_c0c1c5.png height 400
    14580 > width 600 supersample 3
    14581 
    14582 > hide #!10.3 models
    14583 
    14584 > show #!11.1 models
    14585 
    14586 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_ape_sharp_c9c3c2c5c1.png
    14587 > height 400 width 600 supersample 3
    14588 
    14589 > hide #!11.1 models
    14590 
    14591 > show #!11.2 models
    14592 
    14593 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_pe_sharp_c6c7c8c1c5.png
    14594 > height 400 width 600 supersample 3
    14595 
    14596 > hide #!11.2 models
    14597 
    14598 > show #!11.3 models
    14599 
    14600 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_e_sharp_c0c1c5.png height
    14601 > 400 width 600 supersample 3
    14602 
    14603 > hide #!11.3 models
    14604 
    14605 > show #!12.10 models
    14606 
    14607 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J53_c0_c0.png height 400
    14608 > width 600 supersample 3
    14609 
    14610 > hide #!12.10 models
    14611 
    14612 > show #!12.1 models
    14613 
    14614 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J54_c1_c1.png height 400
    14615 > width 600 supersample 3
    14616 
    14617 > hide #!12.1 models
    14618 
    14619 > show #!12.2 models
    14620 
    14621 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J55_c2_c2.png height 400
    14622 > width 600 supersample 3
    14623 
    14624 > hide #!12.2 models
    14625 
    14626 > show #!12.3 models
    14627 
    14628 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J56_c3_c3.png height 400
    14629 > width 600 supersample 3
    14630 
    14631 > hide #!12.3 models
    14632 
    14633 > show #!12.4 models
    14634 
    14635 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J57_c4_c4.png height 400
    14636 > width 600 supersample 3
    14637 
    14638 > hide #!12.4 models
    14639 
    14640 > show #!12.5 models
    14641 
    14642 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J58_c5_c5.png height 400
    14643 > width 600 supersample 3
    14644 
    14645 > hide #!12.5 models
    14646 
    14647 > show #!12.6 models
    14648 
    14649 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J59_c6_c6.png height 400
    14650 > width 600 supersample 3
    14651 
    14652 > hide #!12.6 models
    14653 
    14654 > show #!12.7 models
    14655 
    14656 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J60_c7_c7.png height 400
    14657 > width 600 supersample 3
    14658 
    14659 > hide #!12.7 models
    14660 
    14661 > show #!12.8 models
    14662 
    14663 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J61_c8_c8.png height 400
    14664 > width 600 supersample 3
    14665 
    14666 > hide #!12.8 models
    14667 
    14668 > show #!12.9 models
    14669 
    14670 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J62_c9_c9.png height 400
    14671 > width 600 supersample 3
    14672 
    14673 > hide #!12.9 models
    14674 
    14675 > show #!20.1 models
    14676 
    14677 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J111_ape_c1c1.png height 400
    14678 > width 600 supersample 3
    14679 
    14680 > hide #!20.1 models
    14681 
    14682 > show #!20.2 models
    14683 
    14684 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J112_ap_c2c1.png height 400
    14685 > width 600 supersample 3
    14686 
    14687 > hide #!20.2 models
    14688 
    14689 > show #!20.3 models
    14690 
    14691 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J113_pe_c3.png height 400
    14692 > width 600 supersample 3
    14693 
    14694 > hide #!20.3 models
    14695 
    14696 > show #!20.4 models
    14697 
    14698 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J124_e_c4.png height 400
    14699 > width 600 supersample 3
    14700 
    14701 > hide #!20.4 models
    14702 
    14703 > graphics quality 1
    14704 
    14705 > movie record
    14706 
    14707 > turn y 2 180
    14708 
    14709 > wait 180
    14710 
    14711 > movie encode /Users/dalar193/Desktop/movie3.mp4
    14712 
    14713 Movie saved to /Users/dalar193/Desktop/movie3.mp4 
    14714  
    14715 
    14716 > movie record
    14717 
    14718 > turn y 2 180
    14719 
    14720 > wait 180
    14721 
    14722 > movie encode /Users/dalar193/Desktop/movie4.mp4
    14723 
    14724 Movie saved to /Users/dalar193/Desktop/movie4.mp4 
    14725  
    14726 
    14727 > graphics quality 6
    14728 
    14729 > graphics silhouettes false
    14730 
    14731 > graphics quality 6
    14732 
    14733 > show #!1.1 models
    14734 
    14735 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8emm_map_c2.png height 400
    14736 > width 600 supersample 3
    14737 
    14738 > show #!1.3 models
    14739 
    14740 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8b0x_map_c5.png height 400
    14741 > width 600 supersample 3
    14742 
    14743 > hide #!1.3 models
    14744 
    14745 > show #!1.10 models
    14746 
    14747 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_7o1a_map_c11.png height 400
    14748 > width 600 supersample 3
    14749 
    14750 > hide #!1.10 models
    14751 
    14752 > show #!2.2 models
    14753 
    14754 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape1_c1c2c4.png height 400
    14755 > width 600 supersample 3
    14756 
    14757 > hide #!2.2 models
    14758 
    14759 > show #!2.3 models
    14760 
    14761 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape2_c6.png height 400 width
    14762 > 600 supersample 3
    14763 
    14764 > hide #!2.3 models
    14765 
    14766 > show #!2.4 models
    14767 
    14768 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape3_c2c1c9c7.png height 400
    14769 > width 600 supersample 3
    14770 
    14771 > hide #!2.4 models
    14772 
    14773 > show #!2.5 models
    14774 
    14775 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_pe_c8c6c3.png height 400
    14776 > width 600 supersample 3
    14777 
    14778 > hide #!2.5 models
    14779 
    14780 > show #!2.6 models
    14781 
    14782 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_e_c0.png height 400 width
    14783 > 600 supersample 3
    14784 
    14785 > hide #!2.6 models
    14786 
    14787 > show #!4.10 models
    14788 
    14789 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J83_cl0_c0.png height 400
    14790 > width 600 supersample 3
    14791 
    14792 > hide #!4.10 models
    14793 
    14794 > show #!4.1 models
    14795 
    14796 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J84_cl1_c1.png height 400
    14797 > width 600 supersample 3
    14798 
    14799 > hide #!4.1 models
    14800 
    14801 > show #!4.2 models
    14802 
    14803 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J85_cl2_c2.png height 400
    14804 > width 600 supersample 3
    14805 
    14806 > hide #!4.2 models
    14807 
    14808 > show #!4.3 models
    14809 
    14810 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J86_cl3_c3.png height 400
    14811 > width 600 supersample 3
    14812 
    14813 > hide #!4.3 models
    14814 
    14815 > show #!4.4 models
    14816 
    14817 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J87_cl4_c4.png height 400
    14818 > width 600 supersample 3
    14819 
    14820 > hide #!4.4 models
    14821 
    14822 > show #!4.5 models
    14823 
    14824 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J88_cl5_c5.png height 400
    14825 > width 600 supersample 3
    14826 
    14827 > hide #!4.5 models
    14828 
    14829 > show #!4.6 models
    14830 
    14831 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J89_cl6_c6.png height 400
    14832 > width 600 supersample 3
    14833 
    14834 > hide #!4.6 models
    14835 
    14836 > show #!4.7 models
    14837 
    14838 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J90_cl7_c7.png height 400
    14839 > width 600 supersample 3
    14840 
    14841 > hide #!4.7 models
    14842 
    14843 > show #!4.8 models
    14844 
    14845 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J91_cl8_c8.png height 400
    14846 > width 600 supersample 3
    14847 
    14848 > hide #!4.8 models
    14849 
    14850 > show #!4.9 models
    14851 
    14852 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J92_cl9_c9.png height 400
    14853 > width 600 supersample 3
    14854 
    14855 > hide #!4.9 models
    14856 
    14857 > show #!10.1 models
    14858 
    14859 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_ape_c9c3c2c5c1.png height
    14860 > 400 width 600 supersample 3
    14861 
    14862 > hide #!10.1 models
    14863 
    14864 > show #!10.2 models
    14865 
    14866 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_pe_c6c7c8c1c5.png height
    14867 > 400 width 600 supersample 3
    14868 
    14869 > hide #!10.2 models
    14870 
    14871 > show #!10.3 models
    14872 
    14873 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_e_c0c1c5.png height 400
    14874 > width 600 supersample 3
    14875 
    14876 > hide #!10.3 models
    14877 
    14878 > show #!11.1 models
    14879 
    14880 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_ape_sharp_c9c3c2c5c1.png
    14881 > height 400 width 600 supersample 3
    14882 
    14883 > hide #!11.1 models
    14884 
    14885 > show #!11.2 models
    14886 
    14887 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_pe_sharp_c6c7c8c1c5.png
    14888 > height 400 width 600 supersample 3
    14889 
    14890 > hide #!11.2 models
    14891 
    14892 > show #!11.3 models
    14893 
    14894 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_e_sharp_c0c1c5.png height
    14895 > 400 width 600 supersample 3
    14896 
    14897 > hide #!11.3 models
    14898 
    14899 > show #!12.10 models
    14900 
    14901 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J53_c0_c0.png height 400
    14902 > width 600 supersample 3
    14903 
    14904 > hide #!12.10 models
    14905 
    14906 > show #!12.1 models
    14907 
    14908 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J54_c1_c1.png height 400
    14909 > width 600 supersample 3
    14910 
    14911 > hide #!12.1 models
    14912 
    14913 > show #!12.2 models
    14914 
    14915 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J55_c2_c2.png height 400
    14916 > width 600 supersample 3
    14917 
    14918 > hide #!12.2 models
    14919 
    14920 > show #!12.3 models
    14921 
    14922 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J56_c3_c3.png height 400
    14923 > width 600 supersample 3
    14924 
    14925 > hide #!12.3 models
    14926 
    14927 > show #!12.4 models
    14928 
    14929 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J57_c4_c4.png height 400
    14930 > width 600 supersample 3
    14931 
    14932 > hide #!12.4 models
    14933 
    14934 > show #!12.5 models
    14935 
    14936 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J58_c5_c5.png height 400
    14937 > width 600 supersample 3
    14938 
    14939 > hide #!12.5 models
    14940 
    14941 > show #!12.6 models
    14942 
    14943 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J59_c6_c6.png height 400
    14944 > width 600 supersample 3
    14945 
    14946 > hide #!12.6 models
    14947 
    14948 > show #!12.7 models
    14949 
    14950 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J60_c7_c7.png height 400
    14951 > width 600 supersample 3
    14952 
    14953 > hide #!12.7 models
    14954 
    14955 > show #!12.8 models
    14956 
    14957 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J61_c8_c8.png height 400
    14958 > width 600 supersample 3
    14959 
    14960 > hide #!12.8 models
    14961 
    14962 > show #!12.9 models
    14963 
    14964 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J62_c9_c9.png height 400
    14965 > width 600 supersample 3
    14966 
    14967 > hide #!12.9 models
    14968 
    14969 > show #!20.1 models
    14970 
    14971 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J111_ape_c1c1.png height 400
    14972 > width 600 supersample 3
    14973 
    14974 > hide #!20.1 models
    14975 
    14976 > show #!20.2 models
    14977 
    14978 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J112_ap_c2c1.png height 400
    14979 > width 600 supersample 3
    14980 
    14981 > hide #!20.2 models
    14982 
    14983 > show #!20.3 models
    14984 
    14985 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J113_pe_c3.png height 400
    14986 > width 600 supersample 3
    14987 
    14988 > hide #!20.3 models
    14989 
    14990 > show #!20.4 models
    14991 
    14992 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J124_e_c4.png height 400
    14993 > width 600 supersample 3
    14994 
    14995 > hide #!20.4 models
    14996 
    14997 > graphics quality 1
    14998 
    14999 > select #1.3
    15000 
    15001 2 models selected 
    15002 
    15003 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8b0x_map_c5.png height 400
    15004 > width 600 supersample 3
    15005 
    15006 > hide #!1.3 models
    15007 
    15008 > ~select
    15009 
    15010 Nothing selected 
    15011 
    15012 > select #1.3
    15013 
    15014 2 models selected 
    15015 
    15016 > show #!1.3 models
    15017 
    15018 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8b0x_map_c5.png height 400
    15019 > width 600 supersample 3
    15020 
    15021 > hide #!1.3 models
    15022 
    15023 > ~select
    15024 
    15025 Nothing selected 
    15026 
    15027 > graphics selection color black width 1
    15028 
    15029 > select #1.3
    15030 
    15031 2 models selected 
    15032 
    15033 > show #!1.3 models
    15034 
    15035 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8b0x_map_c5.png height 400
    15036 > width 600 supersample 3
    15037 
    15038 > hide #!1.3 models
    15039 
    15040 > ~select
    15041 
    15042 Nothing selected 
    15043 
    15044 > show #!1.3 models
    15045 
    15046 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8b0x_map_c5.png height 400
    15047 > width 600 supersample 3
    15048 
    15049 > hide #!1.3 models
    15050 
    15051 > show #!1.3 models
    15052 
    15053 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8b0x_map_c5.png height 400
    15054 > width 600 supersample 3
    15055 
    15056 > hide #!1.3 models
    15057 
    15058 > graphics quality 6
    15059 
    15060 > graphics selection color white width 1
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    15062 > show #!1.1 models
    15063 
    15064 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8emm_map_c2.png height 400
    15065 > width 600 supersample 3
    15066 
    15067 > show #!1.3 models
    15068 
    15069 > select #1.3
    15070 
    15071 2 models selected 
    15072 
    15073 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8b0x_map_c5.png height 400
    15074 > width 600 supersample 3
    15075 
    15076 > hide #!1.3 models
    15077 
    15078 > ~select
    15079 
    15080 Nothing selected 
    15081 
    15082 > graphics quality 6
    15083 
    15084 > graphics selection color yellow width 1
    15085 
    15086 > show #!1.1 models
    15087 
    15088 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8emm_map_c2.png height 400
    15089 > width 600 supersample 3
    15090 
    15091 > show #!1.3 models
    15092 
    15093 > select #1.3
    15094 
    15095 2 models selected 
    15096 
    15097 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8b0x_map_c5.png height 400
    15098 > width 600 supersample 3
    15099 
    15100 > hide #!1.3 models
    15101 
    15102 > ~select
    15103 
    15104 Nothing selected 
    15105 
    15106 > color #1.1 gray
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    15108 > color #1.3 magenta
    15109 
    15110 > color #1.10 magenta
    15111 
    15112 > color #2.2 magenta
    15113 
    15114 > color #2.3 magenta
    15115 
    15116 > color #2.4 magenta
    15117 
    15118 > color #2.5 magenta
    15119 
    15120 > color #2.6 magenta
    15121 
    15122 > color #4.10 magenta
    15123 
    15124 > color #4.1 magenta
    15125 
    15126 > color #4.2 magenta
    15127 
    15128 > color #4.3 magenta
    15129 
    15130 > color #4.4 magenta
    15131 
    15132 > color #4.5 magenta
    15133 
    15134 > color #4.6 magenta
    15135 
    15136 > color #4.7 magenta
    15137 
    15138 > color #4.8 magenta
    15139 
    15140 > color #4.9 magenta
    15141 
    15142 > color #10.1 magenta
    15143 
    15144 > color #10.2 magenta
    15145 
    15146 > color #10.3 magenta
    15147 
    15148 > color #12.1 magenta
    15149 
    15150 [Repeated 1 time(s)]
    15151 
    15152 > color #12.2 magenta
    15153 
    15154 > color #12.3 magenta
    15155 
    15156 > color #12.4 magenta
    15157 
    15158 > color #12.5 magenta
    15159 
    15160 > color #12.6 magenta
    15161 
    15162 > color #12.7 magenta
    15163 
    15164 > color #12.8 magenta
    15165 
    15166 > color #12.9 magenta
    15167 
    15168 > color #20.1 magenta
    15169 
    15170 > color #20.2 magenta
    15171 
    15172 > color #20.3 magenta
    15173 
    15174 > color #20.4 magenta
    15175 
    15176 > show #!1.1 models
    15177 
    15178 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8emm_map_c2.png height 400
    15179 > width 600 supersample 3
    15180 
    15181 > show #!1.3 models
    15182 
    15183 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8b0x_map_c5.png height 400
    15184 > width 600 supersample 3
    15185 
    15186 > hide #!1.3 models
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    15190 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_7o1a_map_c11.png height 400
    15191 > width 600 supersample 3
    15192 
    15193 > hide #!1.10 models
    15194 
    15195 > show #!2.2 models
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    15197 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape1_c1c2c4.png height 400
    15198 > width 600 supersample 3
    15199 
    15200 > hide #!2.2 models
    15201 
    15202 > show #!2.3 models
    15203 
    15204 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape2_c6.png height 400 width
    15205 > 600 supersample 3
    15206 
    15207 > hide #!2.3 models
    15208 
    15209 > show #!2.4 models
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    15213 
    15214 > hide #!2.4 models
    15215 
    15216 > show #!2.5 models
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    15218 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_pe_c8c6c3.png height 400
    15219 > width 600 supersample 3
    15220 
    15221 > hide #!2.5 models
    15222 
    15223 > show #!2.6 models
    15224 
    15225 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_e_c0.png height 400 width
    15226 > 600 supersample 3
    15227 
    15228 > hide #!2.6 models
    15229 
    15230 > show #!4.10 models
    15231 
    15232 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J83_cl0_c0.png height 400
    15233 > width 600 supersample 3
    15234 
    15235 > hide #!4.10 models
    15236 
    15237 > show #!4.1 models
    15238 
    15239 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J84_cl1_c1.png height 400
    15240 > width 600 supersample 3
    15241 
    15242 > hide #!4.1 models
    15243 
    15244 > show #!4.2 models
    15245 
    15246 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J85_cl2_c2.png height 400
    15247 > width 600 supersample 3
    15248 
    15249 > hide #!4.2 models
    15250 
    15251 > show #!4.3 models
    15252 
    15253 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J86_cl3_c3.png height 400
    15254 > width 600 supersample 3
    15255 
    15256 > hide #!4.3 models
    15257 
    15258 > show #!4.4 models
    15259 
    15260 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J87_cl4_c4.png height 400
    15261 > width 600 supersample 3
    15262 
    15263 > hide #!4.4 models
    15264 
    15265 > show #!4.5 models
    15266 
    15267 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J88_cl5_c5.png height 400
    15268 > width 600 supersample 3
    15269 
    15270 > hide #!4.5 models
    15271 
    15272 > show #!4.6 models
    15273 
    15274 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J89_cl6_c6.png height 400
    15275 > width 600 supersample 3
    15276 
    15277 > hide #!4.6 models
    15278 
    15279 > show #!4.7 models
    15280 
    15281 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J90_cl7_c7.png height 400
    15282 > width 600 supersample 3
    15283 
    15284 > hide #!4.7 models
    15285 
    15286 > show #!4.8 models
    15287 
    15288 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J91_cl8_c8.png height 400
    15289 > width 600 supersample 3
    15290 
    15291 > hide #!4.8 models
    15292 
    15293 > show #!4.9 models
    15294 
    15295 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J92_cl9_c9.png height 400
    15296 > width 600 supersample 3
    15297 
    15298 > hide #!4.9 models
    15299 
    15300 > show #!10.1 models
    15301 
    15302 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_ape_c9c3c2c5c1.png height
    15303 > 400 width 600 supersample 3
    15304 
    15305 > hide #!10.1 models
    15306 
    15307 > show #!10.2 models
    15308 
    15309 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_pe_c6c7c8c1c5.png height
    15310 > 400 width 600 supersample 3
    15311 
    15312 > hide #!10.2 models
    15313 
    15314 > show #!10.3 models
    15315 
    15316 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_e_c0c1c5.png height 400
    15317 > width 600 supersample 3
    15318 
    15319 > hide #!10.3 models
    15320 
    15321 > show #!11.1 models
    15322 
    15323 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_ape_sharp_c9c3c2c5c1.png
    15324 > height 400 width 600 supersample 3
    15325 
    15326 > hide #!11.1 models
    15327 
    15328 > show #!11.2 models
    15329 
    15330 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_pe_sharp_c6c7c8c1c5.png
    15331 > height 400 width 600 supersample 3
    15332 
    15333 > hide #!11.2 models
    15334 
    15335 > show #!11.3 models
    15336 
    15337 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_e_sharp_c0c1c5.png height
    15338 > 400 width 600 supersample 3
    15339 
    15340 > hide #!11.3 models
    15341 
    15342 > show #!12.10 models
    15343 
    15344 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J53_c0_c0.png height 400
    15345 > width 600 supersample 3
    15346 
    15347 > hide #!12.10 models
    15348 
    15349 > show #!12.1 models
    15350 
    15351 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J54_c1_c1.png height 400
    15352 > width 600 supersample 3
    15353 
    15354 > hide #!12.1 models
    15355 
    15356 > show #!12.2 models
    15357 
    15358 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J55_c2_c2.png height 400
    15359 > width 600 supersample 3
    15360 
    15361 > hide #!12.2 models
    15362 
    15363 > show #!12.3 models
    15364 
    15365 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J56_c3_c3.png height 400
    15366 > width 600 supersample 3
    15367 
    15368 > hide #!12.3 models
    15369 
    15370 > show #!12.4 models
    15371 
    15372 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J57_c4_c4.png height 400
    15373 > width 600 supersample 3
    15374 
    15375 > hide #!12.4 models
    15376 
    15377 > show #!12.5 models
    15378 
    15379 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J58_c5_c5.png height 400
    15380 > width 600 supersample 3
    15381 
    15382 > hide #!12.5 models
    15383 
    15384 > show #!12.6 models
    15385 
    15386 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J59_c6_c6.png height 400
    15387 > width 600 supersample 3
    15388 
    15389 > hide #!12.6 models
    15390 
    15391 > show #!12.7 models
    15392 
    15393 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J60_c7_c7.png height 400
    15394 > width 600 supersample 3
    15395 
    15396 > hide #!12.7 models
    15397 
    15398 > show #!12.8 models
    15399 
    15400 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J61_c8_c8.png height 400
    15401 > width 600 supersample 3
    15402 
    15403 > hide #!12.8 models
    15404 
    15405 > show #!12.9 models
    15406 
    15407 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J62_c9_c9.png height 400
    15408 > width 600 supersample 3
    15409 
    15410 > hide #!12.9 models
    15411 
    15412 > show #!20.1 models
    15413 
    15414 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J111_ape_c1c1.png height 400
    15415 > width 600 supersample 3
    15416 
    15417 > hide #!20.1 models
    15418 
    15419 > show #!20.2 models
    15420 
    15421 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J112_ap_c2c1.png height 400
    15422 > width 600 supersample 3
    15423 
    15424 > hide #!20.2 models
    15425 
    15426 > show #!20.3 models
    15427 
    15428 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J113_pe_c3.png height 400
    15429 > width 600 supersample 3
    15430 
    15431 > hide #!20.3 models
    15432 
    15433 > show #!20.4 models
    15434 
    15435 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J124_e_c4.png height 400
    15436 > width 600 supersample 3
    15437 
    15438 > hide #!20.4 models
    15439 
    15440 > graphics quality 1
    15441 
    15442 > hide #!1.1 models
    15443 
    15444 > show #!1.1 models
    15445 
    15446 > show #!1.3 models
    15447 
    15448 > volume #1.3 level 0.18
    15449 
    15450 > volume #1.3 level 0.2
    15451 
    15452 > volume #1.3 level 0.21
    15453 
    15454 > volume #1.3 level 0.23
    15455 
    15456 > volume #1.3 level 0.22
    15457 
    15458 > volume #1.3 level 0.24
    15459 
    15460 > volume #1.3 level 0.23
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    15462 > volume #1.10 level 0.015
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    15464 > volume #1.10 level 0.013
    15465 
    15466 > volume #1.10 level 0.012
    15467 
    15468 > volume #1.10 level 0.013
    15469 
    15470 > volume #1.10 level 0.012
    15471 
    15472 > volume #2.2 level 0.013
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    15474 > volume #2.2 level 0.014
    15475 
    15476 > volume #2.2 level 0.015
    15477 
    15478 > volume #2.2 level 0.014
    15479 
    15480 > volume #2.2 level 0.015
    15481 
    15482 > volume #2.2 level 0.014
    15483 
    15484 > volume #2.3 level 0.014
    15485 
    15486 > volume #2.3 level 0.015
    15487 
    15488 > volume #2.3 level 0.014
    15489 
    15490 > volume #2.4 level 0.014
    15491 
    15492 > volume #2.5 level 0.014
    15493 
    15494 > volume #2.6 level 0.014
    15495 
    15496 > volume #2.6 level 0.013
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    15498 > volume #2.6 level 0.012
    15499 
    15500 > volume #2.6 level 0.013
    15501 
    15502 > volume #4.10 level 0.41
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    15504 > volume #4.10 level 0.4
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    15506 > volume #4.1 level 0.42
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    15508 > volume #4.1 level 0.45
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    15510 > volume #4.1 level 0.46
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    15512 > volume #4.1 level 0.48
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    15514 > volume #4.1 level 0.5
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    15516 > volume #4.10 level 0.41
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    15518 > volume #4.10 level 0.5
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    15520 > volume #4.10 level 0.35
    15521 
    15522 > volume #4.10 level 0.38
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    15524 > volume #4.10 level 0.4
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    15526 > volume #4.2 level 0.45
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    15528 > volume #4.2 level 0.48
    15529 
    15530 > volume #4.2 level 0.47
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    15532 > volume #4.3 level 0.5
    15533 
    15534 > volume #4.4 level 0.5
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    15536 > volume #4.5 level 0.5
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    15538 > volume #4.5 level 0.48
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    15540 > volume #4.5 level 0.46
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    15542 > volume #4.5 level 0.47
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    15544 > volume #4.5 level 0.48
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    15546 > volume #4.6 level 0.5
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    15548 > volume #4.7 level 0.5
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    15550 > volume #4.8 level 0.5
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    15552 > volume #4.8 level 0.52
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    15554 > volume #4.8 level 0.55
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    15556 > volume #4.9 level 0.55
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    15558 > volume #4.9 level 0.52
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    15560 > volume #10.1 level 0.015
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    15562 > volume #10.1 level 0.014
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    15564 > volume #10.2 level 0.015
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    15566 > volume #10.2 level 0.014
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    15568 > volume #10.2 level 0.015
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    15570 > volume #10.1 level 0.015
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    15572 > volume #10.3 level 0.015
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    15574 > volume #10.3 level 0.014
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    15576 > volume #10.3 level 0.013
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    15578 > volume #10.3 level 0.012
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    15580 > volume #10.3 level 0.011
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    15582 > volume #12.1 level 0.38
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    15584 > volume #12.1 level 0.4
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    15586 > volume #12.2 level 0.4
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    15588 > volume #12.2 level 0.41
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    15590 > volume #12.1 level 0.41
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    15592 > volume #12.1 level 0.4
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    15594 > volume #12.3 level 0.4
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    15596 > volume #12.3 level 0.42
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    15598 > volume #12.3 level 0.43
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    15600 > volume #12.4 level 0.4
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    15602 > volume #12.4 level 0.42
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    15604 > volume #12.5 level 0.4
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    15606 > volume #12.5 level 0.43
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    15608 > volume #12.5 level 0.42
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    15610 > volume #12.5 level 0.41
    15611 
    15612 > volume #12.5 level 0.42
    15613 
    15614 > 42
    15615 
    15616 Unknown command: 42 
    15617 
    15618 > volume #12.6 level 0.42
    15619 
    15620 > volume #12.6 level 0.45
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    15622 > volume #12.6 level 0.44
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    15624 > volume #12.6 level 0.43
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    15626 > volume #12.7 level 0.42
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    15628 > volume #12.7 level 0.44
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    15630 > volume #12.8 level 0.4
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    15632 > volume #12.8 level 0.42
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    15634 > volume #12.8 level 0.41
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    15636 > volume #12.9 level 0.4
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    15638 > volume #12.9 level 0.42
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    15640 > volume #12.9 level 0.43
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    15642 > volume #12.9 level 0.42
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    15644 > volume #12.9 level 0.41
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    15646 > volume #12.9 level 0.42
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    15648 > volume #20.1 level 0.22
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    15650 > volume #20.1 level 0.23
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    15652 > volume #20.1 level 0.22
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    15660 > volume #20.3 level 0.22
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    15664 > volume #20.4 level 0.18
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    15666 > volume #20.4 level 0.16
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    15668 > volume #20.4 level 0.18
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    15670 > volume #20.4 level 0.17
    15671 
    15672 > volume #1.1 level 0.008
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    15674 > volume #1.3 level 0.230
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    15676 > volume #1.10 level 0.012
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    15678 > volume #2.2 level 0.014
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    15680 > volume #2.3 level 0.014
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    15682 > volume #2.4 level 0.014
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    15684 > volume #2.5 level 0.014
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    15686 > volume #2.6 level 0.013
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    15688 > volume #4.10 level 0.400
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    15700 > volume #4.6 level 0.500
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    15702 > volume #4.7 level 0.500
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    15704 > volume #4.8 level 0.550
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    15708 > volume #10.1 level 0.015
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    15710 > volume #10.2 level 0.015
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    15712 > volume #10.3 level 0.012
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    15714 > volume #12.10 level 0.360
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    15716 > volume #12.1 level 0.400
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    15728 > volume #12.7 level 0.440
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    15732 > volume #12.9 level 0.420
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    15734 > volume #20.1 level 0.220
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    15736 > volume #20.2 level 0.220
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    15738 > volume #20.3 level 0.230
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    15740 > volume #20.4 level 0.170
    15741 
    15742 > graphics quality 6
    15743 
    15744 > show #!1.1 models
    15745 
    15746 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8emm_map_c2.png height 400
    15747 > width 600 supersample 3
    15748 
    15749 > show #!1.3 models
    15750 
    15751 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8b0x_map_c5.png height 400
    15752 > width 600 supersample 3
    15753 
    15754 > hide #!1.3 models
    15755 
    15756 > show #!1.10 models
    15757 
    15758 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_7o1a_map_c11.png height 400
    15759 > width 600 supersample 3
    15760 
    15761 > hide #!1.10 models
    15762 
    15763 > show #!2.2 models
    15764 
    15765 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape1_c1c2c4.png height 400
    15766 > width 600 supersample 3
    15767 
    15768 > hide #!2.2 models
    15769 
    15770 > show #!2.3 models
    15771 
    15772 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape2_c6.png height 400 width
    15773 > 600 supersample 3
    15774 
    15775 > hide #!2.3 models
    15776 
    15777 > show #!2.4 models
    15778 
    15779 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape3_c2c1c9c7.png height 400
    15780 > width 600 supersample 3
    15781 
    15782 > hide #!2.4 models
    15783 
    15784 > show #!2.5 models
    15785 
    15786 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_pe_c8c6c3.png height 400
    15787 > width 600 supersample 3
    15788 
    15789 > hide #!2.5 models
    15790 
    15791 > show #!2.6 models
    15792 
    15793 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_e_c0.png height 400 width
    15794 > 600 supersample 3
    15795 
    15796 > hide #!2.6 models
    15797 
    15798 > show #!4.10 models
    15799 
    15800 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J83_cl0_c0.png height 400
    15801 > width 600 supersample 3
    15802 
    15803 > hide #!4.10 models
    15804 
    15805 > show #!4.1 models
    15806 
    15807 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J84_cl1_c1.png height 400
    15808 > width 600 supersample 3
    15809 
    15810 > hide #!4.1 models
    15811 
    15812 > show #!4.2 models
    15813 
    15814 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J85_cl2_c2.png height 400
    15815 > width 600 supersample 3
    15816 
    15817 > hide #!4.2 models
    15818 
    15819 > show #!4.3 models
    15820 
    15821 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J86_cl3_c3.png height 400
    15822 > width 600 supersample 3
    15823 
    15824 > hide #!4.3 models
    15825 
    15826 > show #!4.4 models
    15827 
    15828 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J87_cl4_c4.png height 400
    15829 > width 600 supersample 3
    15830 
    15831 > hide #!4.4 models
    15832 
    15833 > show #!4.5 models
    15834 
    15835 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J88_cl5_c5.png height 400
    15836 > width 600 supersample 3
    15837 
    15838 > hide #!4.5 models
    15839 
    15840 > show #!4.6 models
    15841 
    15842 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J89_cl6_c6.png height 400
    15843 > width 600 supersample 3
    15844 
    15845 > hide #!4.6 models
    15846 
    15847 > show #!4.7 models
    15848 
    15849 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J90_cl7_c7.png height 400
    15850 > width 600 supersample 3
    15851 
    15852 > hide #!4.7 models
    15853 
    15854 > show #!4.8 models
    15855 
    15856 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J91_cl8_c8.png height 400
    15857 > width 600 supersample 3
    15858 
    15859 > hide #!4.8 models
    15860 
    15861 > show #!4.9 models
    15862 
    15863 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J92_cl9_c9.png height 400
    15864 > width 600 supersample 3
    15865 
    15866 > hide #!4.9 models
    15867 
    15868 > show #!10.1 models
    15869 
    15870 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_ape_c9c3c2c5c1.png height
    15871 > 400 width 600 supersample 3
    15872 
    15873 > hide #!10.1 models
    15874 
    15875 > show #!10.2 models
    15876 
    15877 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_pe_c6c7c8c1c5.png height
    15878 > 400 width 600 supersample 3
    15879 
    15880 > hide #!10.2 models
    15881 
    15882 > show #!10.3 models
    15883 
    15884 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_e_c0c1c5.png height 400
    15885 > width 600 supersample 3
    15886 
    15887 > hide #!10.3 models
    15888 
    15889 > show #!11.1 models
    15890 
    15891 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_ape_sharp_c9c3c2c5c1.png
    15892 > height 400 width 600 supersample 3
    15893 
    15894 > hide #!11.1 models
    15895 
    15896 > show #!11.2 models
    15897 
    15898 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_pe_sharp_c6c7c8c1c5.png
    15899 > height 400 width 600 supersample 3
    15900 
    15901 > hide #!11.2 models
    15902 
    15903 > show #!11.3 models
    15904 
    15905 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_e_sharp_c0c1c5.png height
    15906 > 400 width 600 supersample 3
    15907 
    15908 > hide #!11.3 models
    15909 
    15910 > show #!12.10 models
    15911 
    15912 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J53_c0_c0.png height 400
    15913 > width 600 supersample 3
    15914 
    15915 > hide #!12.10 models
    15916 
    15917 > show #!12.1 models
    15918 
    15919 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J54_c1_c1.png height 400
    15920 > width 600 supersample 3
    15921 
    15922 > hide #!12.1 models
    15923 
    15924 > show #!12.2 models
    15925 
    15926 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J55_c2_c2.png height 400
    15927 > width 600 supersample 3
    15928 
    15929 > hide #!12.2 models
    15930 
    15931 > show #!12.3 models
    15932 
    15933 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J56_c3_c3.png height 400
    15934 > width 600 supersample 3
    15935 
    15936 > hide #!12.3 models
    15937 
    15938 > show #!12.4 models
    15939 
    15940 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J57_c4_c4.png height 400
    15941 > width 600 supersample 3
    15942 
    15943 > hide #!12.4 models
    15944 
    15945 > show #!12.5 models
    15946 
    15947 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J58_c5_c5.png height 400
    15948 > width 600 supersample 3
    15949 
    15950 > hide #!12.5 models
    15951 
    15952 > show #!12.6 models
    15953 
    15954 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J59_c6_c6.png height 400
    15955 > width 600 supersample 3
    15956 
    15957 > hide #!12.6 models
    15958 
    15959 > show #!12.7 models
    15960 
    15961 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J60_c7_c7.png height 400
    15962 > width 600 supersample 3
    15963 
    15964 > hide #!12.7 models
    15965 
    15966 > show #!12.8 models
    15967 
    15968 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J61_c8_c8.png height 400
    15969 > width 600 supersample 3
    15970 
    15971 > hide #!12.8 models
    15972 
    15973 > show #!12.9 models
    15974 
    15975 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J62_c9_c9.png height 400
    15976 > width 600 supersample 3
    15977 
    15978 > hide #!12.9 models
    15979 
    15980 > show #!20.1 models
    15981 
    15982 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J111_ape_c1c1.png height 400
    15983 > width 600 supersample 3
    15984 
    15985 > hide #!20.1 models
    15986 
    15987 > show #!20.2 models
    15988 
    15989 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J112_ap_c2c1.png height 400
    15990 > width 600 supersample 3
    15991 
    15992 > hide #!20.2 models
    15993 
    15994 > show #!20.3 models
    15995 
    15996 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J113_pe_c3.png height 400
    15997 > width 600 supersample 3
    15998 
    15999 > hide #!20.3 models
    16000 
    16001 > show #!20.4 models
    16002 
    16003 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J124_e_c4.png height 400
    16004 > width 600 supersample 3
    16005 
    16006 > hide #!20.4 models
    16007 
    16008 > show #!1.1 models
    16009 
    16010 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8emm_map_c2.png height 400
    16011 > width 600 supersample 3
    16012 
    16013 > graphics quality 6
    16014 
    16015 > show #!1.1 models
    16016 
    16017 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8emm_map_c2.png height 400
    16018 > width 600 supersample 3
    16019 
    16020 > show #!1.3 models
    16021 
    16022 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_8b0x_map_c5.png height 400
    16023 > width 600 supersample 3
    16024 
    16025 > hide #!1.3 models
    16026 
    16027 > show #!1.10 models
    16028 
    16029 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_7o1a_map_c11.png height 400
    16030 > width 600 supersample 3
    16031 
    16032 > hide #!1.10 models
    16033 
    16034 > show #!2.2 models
    16035 
    16036 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape1_c1c2c4.png height 400
    16037 > width 600 supersample 3
    16038 
    16039 > hide #!2.2 models
    16040 
    16041 > show #!2.3 models
    16042 
    16043 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape2_c6.png height 400 width
    16044 > 600 supersample 3
    16045 
    16046 > hide #!2.3 models
    16047 
    16048 > show #!2.4 models
    16049 
    16050 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape3_c2c1c9c7.png height 400
    16051 > width 600 supersample 3
    16052 
    16053 > hide #!2.4 models
    16054 
    16055 > show #!2.5 models
    16056 
    16057 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_pe_c8c6c3.png height 400
    16058 > width 600 supersample 3
    16059 
    16060 > hide #!2.5 models
    16061 
    16062 > show #!2.6 models
    16063 
    16064 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_e_c0.png height 400 width
    16065 > 600 supersample 3
    16066 
    16067 > hide #!2.6 models
    16068 
    16069 > show #!4.10 models
    16070 
    16071 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J83_cl0_c0.png height 400
    16072 > width 600 supersample 3
    16073 
    16074 > hide #!4.10 models
    16075 
    16076 > show #!4.1 models
    16077 
    16078 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J84_cl1_c1.png height 400
    16079 > width 600 supersample 3
    16080 
    16081 > hide #!4.1 models
    16082 
    16083 > show #!4.2 models
    16084 
    16085 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J85_cl2_c2.png height 400
    16086 > width 600 supersample 3
    16087 
    16088 > hide #!4.2 models
    16089 
    16090 > show #!4.3 models
    16091 
    16092 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J86_cl3_c3.png height 400
    16093 > width 600 supersample 3
    16094 
    16095 > hide #!4.3 models
    16096 
    16097 > show #!4.4 models
    16098 
    16099 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J87_cl4_c4.png height 400
    16100 > width 600 supersample 3
    16101 
    16102 > hide #!4.4 models
    16103 
    16104 > show #!4.5 models
    16105 
    16106 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J88_cl5_c5.png height 400
    16107 > width 600 supersample 3
    16108 
    16109 > hide #!4.5 models
    16110 
    16111 > show #!4.6 models
    16112 
    16113 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J89_cl6_c6.png height 400
    16114 > width 600 supersample 3
    16115 
    16116 > hide #!4.6 models
    16117 
    16118 > show #!4.7 models
    16119 
    16120 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J90_cl7_c7.png height 400
    16121 > width 600 supersample 3
    16122 
    16123 > hide #!4.7 models
    16124 
    16125 > show #!4.8 models
    16126 
    16127 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J91_cl8_c8.png height 400
    16128 > width 600 supersample 3
    16129 
    16130 > hide #!4.8 models
    16131 
    16132 > show #!4.9 models
    16133 
    16134 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_J92_cl9_c9.png height 400
    16135 > width 600 supersample 3
    16136 
    16137 > hide #!4.9 modelsshow #!10.1 models
    16138 
    16139 Expected a collection of one of 'atoms', 'bonds', 'cartoons', 'models',
    16140 'pbonds', 'pseudobonds', 'ribbons', or 'surfaces' or a keyword 
    16141 
    16142 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_ape_c9c3c2c5c1.png height
    16143 > 400 width 600 supersample 3
    16144 
    16145 > hide #!10.1 models
    16146 
    16147 > show #!10.2 models
    16148 
    16149 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_pe_c6c7c8c1c5.png height
    16150 > 400 width 600 supersample 3
    16151 
    16152 > hide #!10.2 models
    16153 
    16154 > show #!10.3 models
    16155 
    16156 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_e_c0c1c5.png height 400
    16157 > width 600 supersample 3
    16158 
    16159 > hide #!10.3 models
    16160 
    16161 > show #!11.1 models
    16162 
    16163 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_ape_sharp_c9c3c2c5c1.png
    16164 > height 400 width 600 supersample 3
    16165 
    16166 > hide #!11.1 models
    16167 
    16168 > show #!11.2 models
    16169 
    16170 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_pe_sharp_c6c7c8c1c5.png
    16171 > height 400 width 600 supersample 3
    16172 
    16173 > hide #!11.2 models
    16174 
    16175 > show #!11.3 models
    16176 
    16177 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_e_sharp_c0c1c5.png height
    16178 > 400 width 600 supersample 3
    16179 
    16180 > hide #!11.3 models
    16181 
    16182 > show #!12.10 models
    16183 
    16184 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J53_c0_c0.png height 400
    16185 > width 600 supersample 3
    16186 
    16187 > hide #!12.10 models
    16188 
    16189 > show #!12.1 models
    16190 
    16191 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J54_c1_c1.png height 400
    16192 > width 600 supersample 3
    16193 
    16194 > hide #!12.1 models
    16195 
    16196 > show #!12.2 models
    16197 
    16198 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J55_c2_c2.png height 400
    16199 > width 600 supersample 3
    16200 
    16201 > hide #!12.2 models
    16202 
    16203 > show #!12.3 models
    16204 
    16205 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J56_c3_c3.png height 400
    16206 > width 600 supersample 3
    16207 
    16208 > hide #!12.3 models
    16209 
    16210 > show #!12.4 models
    16211 
    16212 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J57_c4_c4.png height 400
    16213 > width 600 supersample 3
    16214 
    16215 > hide #!12.4 models
    16216 
    16217 > show #!12.5 models
    16218 
    16219 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J58_c5_c5.png height 400
    16220 > width 600 supersample 3
    16221 
    16222 > hide #!12.5 models
    16223 
    16224 > show #!12.6 models
    16225 
    16226 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J59_c6_c6.png height 400
    16227 > width 600 supersample 3
    16228 
    16229 > hide #!12.6 models
    16230 
    16231 > show #!12.7 models
    16232 
    16233 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J60_c7_c7.png height 400
    16234 > width 600 supersample 3
    16235 
    16236 > hide #!12.7 models
    16237 
    16238 > show #!12.8 models
    16239 
    16240 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J61_c8_c8.png height 400
    16241 > width 600 supersample 3
    16242 
    16243 > hide #!12.8 models
    16244 
    16245 > show #!12.9 models
    16246 
    16247 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J62_c9_c9.png height 400
    16248 > width 600 supersample 3
    16249 
    16250 > hide #!12.9 models
    16251 
    16252 > show #!20.1 models
    16253 
    16254 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J111_ape_c1c1.png height 400
    16255 > width 600 supersample 3
    16256 
    16257 > hide #!20.1 models
    16258 
    16259 > show #!20.2 models
    16260 
    16261 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J112_ap_c2c1.png height 400
    16262 > width 600 supersample 3
    16263 
    16264 > hide #!20.2 models
    16265 
    16266 > show #!20.3 models
    16267 
    16268 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J113_pe_c3.png height 400
    16269 > width 600 supersample 3
    16270 
    16271 > hide #!20.3 models
    16272 
    16273 > show #!20.4 models
    16274 
    16275 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_dE_J124_e_c4.png height 400
    16276 > width 600 supersample 3
    16277 
    16278 > hide #!20.4 models
    16279 
    16280 > graphics quality 1
    16281 
    16282 > hide #!4.9 models
    16283 
    16284 > volume #2.6 level 0.012
    16285 
    16286 > graphics quality 6
    16287 
    16288 > show #!2.6 models
    16289 
    16290 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_e_c0.png height 400 width
    16291 > 600 supersample 3
    16292 
    16293 > hide #!2.6 models
    16294 
    16295 > volume #2.2 level 0.015
    16296 
    16297 > show #!2.2 models
    16298 
    16299 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape1_c1c2c4.png height 400
    16300 > width 600 supersample 3
    16301 
    16302 > hide #!2.2 models
    16303 
    16304 > volume #2.2 level 0.016
    16305 
    16306 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_ape1_c1c2c4.png height 400
    16307 > width 600 supersample 3
    16308 
    16309 > view ssu_rotation
    16310 
    16311 > windowsize 600 400
    16312 
    16313 > hide #!11 models
    16314 
    16315 > hide #!10.2 models
    16316 
    16317 > show #!10.1 models
    16318 
    16319 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_ape_c9c3c2c5c1.png height
    16320 > 400 width 600 supersample 3
    16321 
    16322 > hide #!10.1 models
    16323 
    16324 > show #!10.2 models
    16325 
    16326 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_pe_c6c7c8c1c5.png height
    16327 > 400 width 600 supersample 3
    16328 
    16329 > hide #!10.2 models
    16330 
    16331 > show #!10.3 models
    16332 
    16333 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_e_c0c1c5.png height 400
    16334 > width 600 supersample 3
    16335 
    16336 > hide #!10.3 models
    16337 
    16338 > show #!20.4 models
    16339 
    16340 > hide #!20.4 models
    16341 
    16342 > show #!20.4 models
    16343 
    16344 > hide #!20.4 models
    16345 
    16346 > show #!20.4 models
    16347 
    16348 > hide #!20.4 models
    16349 
    16350 > show #!20.4 models
    16351 
    16352 > hide #!20.4 models
    16353 
    16354 > show #!20.4 models
    16355 
    16356 > hide #!20.4 models
    16357 
    16358 > show #!20.4 models
    16359 
    16360 > volume #20.4 level 0.15
    16361 
    16362 > volume #20.4 level 0.17
    16363 
    16364 > volume #20.4 level 0.18
    16365 
    16366 > volume #20.4 level 0.12
    16367 
    16368 > volume #20.4 level 0.13
    16369 
    16370 > volume #20.4 level 0.14
    16371 
    16372 > volume #20.4 level 0.15
    16373 
    16374 > volume #20.4 level 0.16
    16375 
    16376 > volume #20.4 level 0.17
    16377 
    16378 > volume #2.5 level 0.015
    16379 
    16380 > volume #2.5 level 0.014
    16381 
    16382 > volume #2.5 level 0.015
    16383 
    16384 > volume #2.5 level 0.016
    16385 
    16386 > show #!2.5 models
    16387 
    16388 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d9_pe_c8c6c3.png height 400
    16389 > width 600 supersample 3
    16390 
    16391 > hide #!2.5 models
    16392 
    16393 > show #!12.10 models
    16394 
    16395 > hide #!12.10 models
    16396 
    16397 > color #12.10 magenta
    16398 
    16399 > show #!12.10 models
    16400 
    16401 > hide #!12.10 models
    16402 
    16403 > show #!12.10 models
    16404 
    16405 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J54_c0_c0.png height 400
    16406 > width 600 supersample 3
    16407 
    16408 > hide #!12.10 models
    16409 
    16410 > show #!12.10 models
    16411 
    16412 > save /Users/dalar193/Desktop/SSU-rot/SSU-rot_d10_J53_c0_c0.png height 400
    16413 > width 600 supersample 3
    16414 
    16415 > hide #!12.10 models
    16416 
    16417 > lighting soft
    16418 
    16419 > lighting simple
    16420 
    16421 > view SSU_rotation
    16422 
    16423 Expected an objects specifier or a view name or a keyword 
    16424 
    16425 > view ssu_rotation
    16426 
    16427 > save /Users/dalar193/wd/deltaRibosomes/figure_ssu_rotation.cxs
    16428 
    16429 > save /Users/dalar193/wd/deltaRibosomes/figure_with_maps.cxs includeMaps true
    16430 
    16431 > lighting simple
    16432 
    16433 [Repeated 1 time(s)]
    16434 
    16435 > view ssu_rotation
    16436 
    16437 > clip list
    16438 
    16439 Using 2 clip planes: 
    16440 far offset 25.407, axis -0.247,-0.913,0.325, point 142.6,172.2,127.1) 
    16441 near offset -423.17, axis 0.247,0.913,-0.325, point 31.92,-237.4,272.7) 
    16442 
    16443 > view matrix
    16444 
    16445 view matrix camera
    16446 0.79432,-0.55514,-0.24672,-27.891,0.0013104,0.40769,-0.91312,-458.73,0.60749,0.72499,0.32456,351.4 
    16447 view matrix models
    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    16449  
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    16451 > hide #!1.1 models
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    16459 > view #1.2/a:2552-2555
    16460 
    16461 > windowsize 700 500
    16462 
    16463 > volume style mesh
    16464 
    16465 > hide #!1.1 models
    16466 
    16467 > view #1.2/a:2552-2555
    16468 
    16469 > show #!1.9 models
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    16563 > show #!14.10 models
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    16571 > show #!14.10 models
    16572 
    16573 > hide #!14.10 models
    16574 
    16575 > show #!14.10 models
    16576 
    16577 > hide #!14.10 models
    16578 
    16579 > show #!14.10 models
    16580 
    16581 > hide #!14.10 models
    16582 
    16583 > show #!14.10 models
    16584 
    16585 > hide #!14.10 models
    16586 
    16587 > show #!14.10 models
    16588 
    16589 > hide #!14.10 models
    16590 
    16591 > show #!14.1 models
    16592 
    16593 > hide #!14.1 models
    16594 
    16595 > show #!14.1 models
    16596 
    16597 > hide #!14.1 models
    16598 
    16599 > show #!14.1 models
    16600 
    16601 > hide #!14.1 models
    16602 
    16603 > show #!14.2 models
    16604 
    16605 > hide #!14.2 models
    16606 
    16607 > show #!14.2 models
    16608 
    16609 > hide #!14.2 models
    16610 
    16611 > show #!14.2 models
    16612 
    16613 > hide #!14.2 models
    16614 
    16615 > show #!14.2 models
    16616 
    16617 > hide #!14.2 models
    16618 
    16619 > show #!14.3 models
    16620 
    16621 > hide #!14.3 models
    16622 
    16623 > show #!14.3 models
    16624 
    16625 > hide #!14.3 models
    16626 
    16627 > show #!14.3 models
    16628 
    16629 > hide #!14.3 models
    16630 
    16631 > show #!14.3 models
    16632 
    16633 > hide #!14.3 models
    16634 
    16635 > show #!14.3 models
    16636 
    16637 > hide #!14.3 models
    16638 
    16639 > graphics silhouettes true
    16640 
    16641 > hide #!1.9 models
    16642 
    16643 > show #!1.9 models
    16644 
    16645 > hide #!1.9 models
    16646 
    16647 > style nucleic atoms
    16648 
    16649 Expected a keyword 
    16650 
    16651 > style nucleic stick
    16652 
    16653 Changed 719706 atom styles 
    16654 
    16655 > style nucleic atoms
    16656 
    16657 Expected a keyword 
    16658 
    16659 > style nucleic sticks
    16660 
    16661 Expected a keyword 
    16662 
    16663 > nucleotides #!1.2 atoms
    16664 
    16665 > style nucleic & #!1.2 stick
    16666 
    16667 Changed 97859 atom styles 
    16668 
    16669 > nucleic atoms
    16670 
    16671 Unknown command: nucleic atoms 
    16672 
    16673 > nucleotides atoms
    16674 
    16675 > graphics silhouettes false
    16676 
    16677 > select #1.2
    16678 
    16679 145735 atoms, 154228 bonds, 6 pseudobonds, 13996 residues, 2 models selected 
    16680 
    16681 > graphics selection color black width 1
    16682 
    16683 > graphics silhouettes true
    16684 
    16685 > ~select
    16686 
    16687 Nothing selected 
    16688 
    16689 > select #1.2
    16690 
    16691 145735 atoms, 154228 bonds, 6 pseudobonds, 13996 residues, 2 models selected 
    16692 
    16693 > ~select
    16694 
    16695 Nothing selected 
    16696 
    16697 > graphics silhouettes false
    16698 
    16699 > select #1.2
    16700 
    16701 145735 atoms, 154228 bonds, 6 pseudobonds, 13996 residues, 2 models selected 
    16702 
    16703 > ~select
    16704 
    16705 Nothing selected 
    16706 
    16707 > graphics silhouettes true
    16708 
    16709 > graphics silhouettes false
    16710 
    16711 > select #1.2
    16712 
    16713 145735 atoms, 154228 bonds, 6 pseudobonds, 13996 residues, 2 models selected 
    16714 
    16715 > show #!1.1 models
    16716 
    16717 > volume #1.1 level 0.016
    16718 
    16719 > volume #1.1 level 0.02
    16720 
    16721 > lighting soft
    16722 
    16723 > lighting full
    16724 
    16725 [Repeated 1 time(s)]
    16726 
    16727 > lighting soft
    16728 
    16729 > lighting simple
    16730 
    16731 > lighting soft
    16732 
    16733 > lighting full
    16734 
    16735 > ~select #1.2
    16736 
    16737 Nothing selected 
    16738 
    16739 > hide #!1.1 models
    16740 
    16741 > select ~sel & ##selected
    16742 
    16743 Nothing selected 
    16744 
    16745 > select #1.2
    16746 
    16747 145735 atoms, 154228 bonds, 6 pseudobonds, 13996 residues, 2 models selected 
    16748 
    16749 > ~select #1.2
    16750 
    16751 Nothing selected 
    16752 
    16753 > graphics silhouettes true
    16754 
    16755 > lighting soft
    16756 
    16757 > color #1.2/Y orchid
    16758 
    16759 > color #1.2 white
    16760 
    16761 [Repeated 1 time(s)]
    16762 
    16763 > color #1.2/Y orchid
    16764 
    16765 > cartoon suppressBackboneDisplay false
    16766 
    16767 > cartoon tether opacity 0
    16768 
    16769 > graphics silhouettes false
    16770 
    16771 > show #!1.1 models
    16772 
    16773 > show #!14.1 models
    16774 
    16775 > hide #!14.1 models
    16776 
    16777 > show #!14.1 models
    16778 
    16779 > hide #!14.1 models
    16780 
    16781 > show #!14.1 models
    16782 
    16783 > hide #!14.1 models
    16784 
    16785 > show #!14.1 models
    16786 
    16787 > hide #!14.1 models
    16788 
    16789 > hide #!1.1 models
    16790 
    16791 > color #1.2/Z blue
    16792 
    16793 > color #1.2/v sienna
    16794 
    16795 > color #1.2/a:2058-2062 pale violet red
    16796 
    16797 > color #1.2/a:2447-2453 coral
    16798 
    16799 > color #1.2/a:2499-2507 green yellow
    16800 
    16801 > color #1.2/a:2580-2587 aquamarine
    16802 
    16803 > color #1.2/a:2607-2610 steel blue
    16804 
    16805 > color #1.2/e:55-73 dark green
    16806 
    16807 > view name A_loop
    16808 
    16809 > graphics silhouettes true
    16810 
    16811 > lighting shadows true intensity 0.5
    16812 
    16813 > lighting shadows false
    16814 
    16815 > lighting shadows true
    16816 
    16817 > lighting shadows false
    16818 
    16819 > lighting shadows true
    16820 
    16821 > lighting shadows false
    16822 
    16823 > lighting flat
    16824 
    16825 [Repeated 1 time(s)]
    16826 
    16827 > lighting simple
    16828 
    16829 [Repeated 1 time(s)]
    16830 
    16831 > lighting soft
    16832 
    16833 > lighting simple
    16834 
    16835 > lighting soft
    16836 
    16837 [Repeated 1 time(s)]
    16838 
    16839 > lighting simple
    16840 
    16841 > graphics quality 6
    16842 
    16843 > save /Users/dalar193/Desktop/image92.png supersample 3
    16844 
    16845 > hide #1.2
    16846 
    16847 > show #1.2/a:2552-2555
    16848 
    16849 > show #1.2/a:2552-2556
    16850 
    16851 > show #1.2/Y:74-76
    16852 
    16853 > show #1.2/Y:73-76
    16854 
    16855 > show #1.2/a:2552-2557
    16856 
    16857 > show #1.2/a:2551-2557
    16858 
    16859 > show #!1.1 models
    16860 
    16861 > hide #!1.1 models
    16862 
    16863 > graphics silhouettes false
    16864 
    16865 > show #!1.1 models
    16866 
    16867 > hide #!1.1 models
    16868 
    16869 > show #!1.1 models
    16870 
    16871 > hide #!1.1 models
    16872 
    16873 > graphics silhouettes true
    16874 
    16875 > view name A_loop
    16876 
    16877 > ~cartoon #1.2/a:1940-1950
    16878 
    16879 > ~cartoon #1.2/a:1940-1960
    16880 
    16881 > cartoon tether opacity 0
    16882 
    16883 > graphics silhouettes false
    16884 
    16885 > graphics silhouettes true
    16886 
    16887 > graphics silhouettes false
    16888 
    16889 > graphics silhouettes true
    16890 
    16891 > graphics silhouettes false
    16892 
    16893 > graphics silhouettes true
    16894 
    16895 > graphics silhouettes false
    16896 
    16897 > graphics silhouettes true
    16898 
    16899 > view name A_loop
    16900 
    16901 > hbonds #1.2/a:2553-2554 #1.2/Y:74-76
    16902 
    16903 Skipping possible acceptor with bad geometry: 8emm #1.2/K IAS 119 O 
    16904 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 O 
    16905  
    16906 Skipping possible acceptor with bad geometry: 8emm #1.2/K IAS 119 OXT 
    16907 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 OXT 
    16908  
    16909 Skipping possible acceptor with bad geometry: 8emm #1.2/K IAS 119 O 
    16910 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 O 
    16911  
    16912 Skipping possible acceptor with bad geometry: 8emm #1.2/K IAS 119 OXT 
    16913 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 OXT 
    16914  
    16915 [Repeated 1 time(s)]Skipping possible acceptor with bad geometry: 8emm #1.2/K
    16916 IAS 119 O 
    16917 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 O 
    16918  
    16919 [Repeated 1 time(s)]Skipping possible acceptor with bad geometry: 8emm #1.2/K
    16920 IAS 119 OXT 
    16921 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 OXT 
    16922  
    16923 Skipping possible acceptor with bad geometry: 8emm #1.2/K IAS 119 O 
    16924 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 O 
    16925  
    16926 Skipping possible acceptor with bad geometry: 8emm #1.2/K IAS 119 OXT 
    16927 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 OXT 
    16928  
    16929 Skipping possible acceptor with bad geometry: 8emm #1.2/K IAS 119 O 
    16930 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 O 
    16931  
    16932 
    16933 Skipped 11 atom(s) with bad connectivities; see log for details 
    16934 
    16935 447 hydrogen bonds found 
    16936 
    16937 > hide #!1.2 models
    16938 
    16939 > show #!1.2 models
    16940 
    16941 > ~hbonds #1.2
    16942 
    16943 [Repeated 1 time(s)]
    16944 
    16945 > ~hbonds
    16946 
    16947 > hbonds #1.2/a:2553-2554
    16948 
    16949 Skipping possible acceptor with bad geometry: 8emm #1.2/K IAS 119 O 
    16950 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 O 
    16951  
    16952 Skipping possible acceptor with bad geometry: 8emm #1.2/K IAS 119 OXT 
    16953 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 OXT 
    16954  
    16955 Skipping possible acceptor with bad geometry: 8emm #1.2/K IAS 119 O 
    16956 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 O 
    16957  
    16958 Skipping possible acceptor with bad geometry: 8emm #1.2/K IAS 119 OXT 
    16959 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 OXT 
    16960  
    16961 [Repeated 1 time(s)]Skipping possible acceptor with bad geometry: 8emm #1.2/K
    16962 IAS 119 O 
    16963 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 O 
    16964  
    16965 [Repeated 1 time(s)]Skipping possible acceptor with bad geometry: 8emm #1.2/K
    16966 IAS 119 OXT 
    16967 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 OXT 
    16968  
    16969 Skipping possible acceptor with bad geometry: 8emm #1.2/K IAS 119 O 
    16970 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 O 
    16971  
    16972 Skipping possible acceptor with bad geometry: 8emm #1.2/K IAS 119 OXT 
    16973 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 OXT 
    16974  
    16975 Skipping possible acceptor with bad geometry: 8emm #1.2/K IAS 119 O 
    16976 Wrong number of grandchild atoms for phi/psi acceptor 8emm #1.2/K IAS 119 O 
    16977  
    16978 
    16979 Skipped 11 atom(s) with bad connectivities; see log for details 
    16980 
    16981 200 hydrogen bonds found 
    16982 
    16983 > ~hbonds
    16984 
    16985 > hbonds #1.2/a:2553-2554 restrict
    16986 
    16987 Missing "restrict" keyword's argument 
    16988 
    16989 > hbonds #1.2/a:2553-2554 restrict #1.2/Y:74-76
    16990 
    16991 5 hydrogen bonds found 
    16992 
    16993 > hbonds #1.2/a:2553-2554 restrict #1.2/Y:74-76,a:2553-2554
    16994 
    16995 5 hydrogen bonds found 
    16996 
    16997 > hbonds #1.2/a:2553-2554 restrict #1.2/a:2553-2554
    16998 
    16999 0 hydrogen bonds found 
    17000 
    17001 > hbonds #1.2/a:2553-2554 restrict #1.2/Y:74-76
    17002 
    17003 5 hydrogen bonds found 
    17004 
    17005 > hbonds #1.2/a:2552-2554 restrict #1.2/Y:74-76
    17006 
    17007 5 hydrogen bonds found 
    17008 
    17009 > hbonds #1.2/a:2552-2554 restrict #1.2/a:2552-2554
    17010 
    17011 0 hydrogen bonds found 
    17012 
    17013 > hbonds #1.2/a:2551-2557 restrict #1.2/a:2551-2557
    17014 
    17015 3 hydrogen bonds found 
    17016 
    17017 > hbonds #1.2/a:2551-2557 restrict #1.2/a:2551-2557,Y:74-76
    17018 
    17019 3 hydrogen bonds found 
    17020 
    17021 > hbonds #1.2/a:2551-2557 restrict #1.2/a:2551-2557/Y:74-76
    17022 
    17023 8 hydrogen bonds found 
    17024 
    17025 > hbonds #1.2/a:2551-2557 restrict #1.2/a:2551-2557/Y:74-76 color yellow
    17026 
    17027 8 hydrogen bonds found 
    17028 
    17029 > cartoon tether opacity 0 target All
    17030 
    17031 Expected a keyword 
    17032 
    17033 > cartoon tether opacity 0 target all
    17034 
    17035 Expected a keyword 
    17036 
    17037 > cartoon tether opacity 0 All
    17038 
    17039 Expected a keyword 
    17040 
    17041 > cartoon tether opacity 0 All
    17042 
    17043 Expected a keyword 
    17044 
    17045 > transparency #1.2/a:2551-2557/Y:74-76 color yellow 0 target p
    17046 
    17047 Missing or invalid "percent" argument: Expected a number 
    17048 
    17049 > transparency #1.2/a:2551-2557/Y:74-76 0 target p
    17050 
    17051 > graphics silhouettes false
    17052 
    17053 > graphics silhouettes true
    17054 
    17055 > lighting simple
    17056 
    17057 > graphics silhouettes false
    17058 
    17059 > lighting simple
    17060 
    17061 > lighting soft
    17062 
    17063 > color #1.2 white
    17064 
    17065 > color #1.2/Y indigo
    17066 
    17067 > color #1.2/Z blue
    17068 
    17069 > color #1.2/a:2552 coral
    17070 
    17071 > color #1.2/a:2553 green yellow
    17072 
    17073 > color #1.2/a:2554 aquamarine
    17074 
    17075 > color #1.2/a:2555 steel blue
    17076 
    17077 > color #1.2/a:2552 khaki
    17078 
    17079 > color #1.2/a:2552 pale violet red
    17080 
    17081 > color #1.2/a:2553 khaki
    17082 
    17083 > color #1.2/a:2554 green yellow
    17084 
    17085 > color #1.2/a:2555 aquamarine
    17086 
    17087 > color #1.2/a:2556 steel blue
    17088 
    17089 > color #1.2/a:2553 moccasin
    17090 
    17091 > color #1.2/a:2553 burly wood
    17092 
    17093 > color #1.2/Y orchid
    17094 
    17095 > hbonds #1.2/a:2551-2557 restrict #1.2/a:2551-2557/Y:74-76 color yellow
    17096 
    17097 8 hydrogen bonds found 
    17098 
    17099 > color #1.2/a@P yellow
    17100 
    17101 > color #1.2/a@P white
    17102 
    17103 > color #1.2/a@P,OP1,OP2 white
    17104 
    17105 > color #1.2/a@P,OP1,OP2,O3',O5' white
    17106 
    17107 > color #1.2/a@P,OP1,OP2,O3',O5',C5' white
    17108 
    17109 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5' white
    17110 
    17111 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    17112 
    17113 > show #!1.1 models
    17114 
    17115 > show #1.2/a:2551-2557,2584
    17116 
    17117 > show #1.2/Y:73-76
    17118 
    17119 > hbonds #1.2/a:2551-2557 restrict #1.2/a:2551-2557,2584/Y:74-76 color yellow
    17120 
    17121 8 hydrogen bonds found 
    17122 
    17123 > hide #1.2/a:2584
    17124 
    17125 > view A_loop
    17126 
    17127 > ~cartoon #1.2/a:1940-1960
    17128 
    17129 > show #1.2/a:2551-2557,2585
    17130 
    17131 > show #1.2/Y:73-76
    17132 
    17133 > hbonds #1.2/a:2551-2557 restrict #1.2/a:2551-2557,2585/Y:74-76 color yellow
    17134 
    17135 8 hydrogen bonds found 
    17136 
    17137 > view A_loop
    17138 
    17139 > ~cartoon #1.2/a:1940-1960
    17140 
    17141 > show #1.2/a:2551-2557,2583
    17142 
    17143 > show #1.2/Y:73-76
    17144 
    17145 > hbonds #1.2/a:2551-2557 restrict #1.2/a:2551-2557,2583/Y:74-76 color yellow
    17146 
    17147 8 hydrogen bonds found 
    17148 
    17149 > hide #1.2/a:2585
    17150 
    17151 > hbonds #1.2/a:2551-2557,2583 restrict #1.2/a:2551-2557,2583/Y:74-76 color
    17152 > yellow
    17153 
    17154 10 hydrogen bonds found 
    17155 
    17156 > hbonds #1.2/a:2551-2557,2582-2583 restrict
    17157 > #1.2/a:2551-2557,2582-2583/Y:74-76 color yellow
    17158 
    17159 13 hydrogen bonds found 
    17160 
    17161 > cartoon #1.2/a:1940-1960
    17162 
    17163 > show #1.2/a:1956,2551-2557,2582-2583/Y:73-76
    17164 
    17165 > hbonds #1.2/a:1956,2551-2557,2582-2583 restrict
    17166 > #1.2/a:1956,2551-2557,2582-2583/Y:74-76 color yellow
    17167 
    17168 13 hydrogen bonds found 
    17169 
    17170 > hide #1.2/a:1956
    17171 
    17172 > show #1.2/a:1955,2551-2557,2582-2583/Y:73-76
    17173 
    17174 > hbonds #1.2/a:1955,2551-2557,2582-2583 restrict
    17175 > #1.2/a:1955,2551-2557,2582-2583/Y:74-76 color yellow
    17176 
    17177 14 hydrogen bonds found 
    17178 
    17179 > hide #1.2
    17180 
    17181 > name to_hbond #1.2/a:1955,2551-2557,2582-2583
    17182 
    17183 > show to_show
    17184 
    17185 Expected a collection of one of 'atoms', 'bonds', 'cartoons', 'models',
    17186 'pbonds', 'pseudobonds', 'ribbons', or 'surfaces' or a keyword 
    17187 
    17188 > show to_hbond
    17189 
    17190 > name to_show to_hbond|#1.2Y:73-76
    17191 
    17192 "to_hbond|#1.2Y:73-76": only initial part "to_hbond|#1.2" of atom specifier
    17193 valid 
    17194 
    17195 > name to_show to_hbond|#1.2/Y:73-76
    17196 
    17197 > show to_show
    17198 
    17199 > hide #!1.1 models
    17200 
    17201 > show #!1.1 models
    17202 
    17203 > ~cartoon #1.2/a:1942-1948
    17204 
    17205 > view A_loop
    17206 
    17207 > hide #1.2
    17208 
    17209 > ~cartoon #1.2
    17210 
    17211 > name to_cartoon #1.2:a/2550-2558/Y:73-76
    17212 
    17213 > name to_hbond #1.2/a:1955,2551-2557,2582-2583
    17214 
    17215 > name to_show to_hbond|to_cartoon
    17216 
    17217 > cartoon to_cartoon
    17218 
    17219 > show to_show
    17220 
    17221 > hbonds to_hbond restrict to_show color yellow
    17222 
    17223 14 hydrogen bonds found 
    17224 
    17225 > graphics silhouettes true
    17226 
    17227 > graphics silhouettes false
    17228 
    17229 > hide #!1.2 models
    17230 
    17231 > show #!1.2 models
    17232 
    17233 > hide #!1.1 models
    17234 
    17235 > lighting soft
    17236 
    17237 > lighting simple
    17238 
    17239 > cartoon to_cartoon
    17240 
    17241 > cartoon #1.2:a/2550-2558/Y:73-76
    17242 
    17243 > cartoon #1.2:a/2550-2558
    17244 
    17245 > name to_cartoon #1.2/a:2550-2558/Y:73-76
    17246 
    17247 > cartoon to_cartoon
    17248 
    17249 > name to_show to_hbond|to_cartoon
    17250 
    17251 > color to_show red
    17252 
    17253 > hide #1.2
    17254 
    17255 > ~cartoon #1.2
    17256 
    17257 > name to_cartoon #1.2/a:2550-2558/Y:73-76
    17258 
    17259 > name to_hbond #1.2/a:1955,2551-2557,2582-2583
    17260 
    17261 > name to_show to_hbond|to_cartoon
    17262 
    17263 > cartoon to_cartoon
    17264 
    17265 > show to_show
    17266 
    17267 > hbonds to_hbond restrict to_show color yellow
    17268 
    17269 15 hydrogen bonds found 
    17270 
    17271 > view A_loop
    17272 
    17273 > color #1.2 white
    17274 
    17275 > color #1.2/Y orchid
    17276 
    17277 > color #1.2/a:2551
    17278 
    17279 > color #1.2/a:2552 pale violet red
    17280 
    17281 > color #1.2/a:2553 khaki
    17282 
    17283 > color #1.2/a:2554 green yellow
    17284 
    17285 > color #1.2/a:2555 aquamarine
    17286 
    17287 > color #1.2/a:2556 steel blue
    17288 
    17289 > color #1.2/a@P
    17290 
    17291 > hbonds to_hbond restrict to_show color yellow
    17292 
    17293 15 hydrogen bonds found 
    17294 
    17295 > color #1.2/a@P
    17296 
    17297 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    17298 
    17299 > hide #1.2/a:1955@P,OP1,OP2,C5',O5'
    17300 
    17301 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',O3'
    17302 
    17303 > view A_loop
    17304 
    17305 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',O3',*'
    17306 
    17307 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',O3',C3',C2',O2'
    17308 
    17309 > show #1.2/a:1955
    17310 
    17311 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',O3',C3',C2',O2'
    17312 
    17313 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    17314 
    17315 > color #1.2/Y orchid
    17316 
    17317 > color #1.2/a:2551
    17318 
    17319 > color #1.2/a:2552 pale violet red
    17320 
    17321 > color #1.2/a:2553 khaki
    17322 
    17323 > color #1.2/a:2554 green yellow
    17324 
    17325 > color #1.2/a:2555 aquamarine
    17326 
    17327 > color #1.2/a:2556 steel blue
    17328 
    17329 > view A_loop
    17330 
    17331 > graphics silhouettes true
    17332 
    17333 > graphics silhouettes false
    17334 
    17335 > graphics silhouettes true
    17336 
    17337 > graphics silhouettes false
    17338 
    17339 > graphics silhouettes true
    17340 
    17341 > graphics silhouettes false
    17342 
    17343 > graphics silhouettes true
    17344 
    17345 > graphics silhouettes false
    17346 
    17347 > graphics silhouettes true
    17348 
    17349 > graphics silhouettes false
    17350 
    17351 > graphics silhouettes true
    17352 
    17353 > graphics silhouettes false
    17354 
    17355 > graphics silhouettes true
    17356 
    17357 > graphics silhouettes false
    17358 
    17359 > select to_show
    17360 
    17361 340 atoms, 375 bonds, 15 pseudobonds, 16 residues, 2 models selected 
    17362 
    17363 > lighting soft
    17364 
    17365 > lighting simple
    17366 
    17367 > lighting full
    17368 
    17369 > lighting flat
    17370 
    17371 > lighting shadows true intensity 0.5
    17372 
    17373 > lighting soft
    17374 
    17375 > lighting full
    17376 
    17377 > lighting soft
    17378 
    17379 > lighting full
    17380 
    17381 > lighting soft
    17382 
    17383 > lighting simple
    17384 
    17385 > name to_hbond #1.2/a:1955,2551-2557,2581-2584
    17386 
    17387 > name to_show to_hbond|to_cartoon
    17388 
    17389 > cartoon to_cartoon
    17390 
    17391 > show to_show
    17392 
    17393 > hbonds to_hbond restrict to_show color yellow
    17394 
    17395 16 hydrogen bonds found 
    17396 
    17397 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    17398 
    17399 > name to_cartoon #1.2/a:2550-2558,2581-2584/Y:73-76
    17400 
    17401 > name to_hbond #1.2/a:1955,2551-2557,2581-2584
    17402 
    17403 > name to_show to_hbond|to_cartoon
    17404 
    17405 > cartoon to_cartoon
    17406 
    17407 > show to_show
    17408 
    17409 > hbonds to_hbond restrict to_show color yellow
    17410 
    17411 16 hydrogen bonds found 
    17412 
    17413 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    17414 
    17415 > ~cartoon
    17416 
    17417 > name to_cartoon #1.2/a:2550-2558/Y:73-76
    17418 
    17419 > name to_hbond #1.2/a:1955,2551-2557,2581-2584
    17420 
    17421 > name to_show to_hbond|to_cartoon
    17422 
    17423 > cartoon to_cartoon
    17424 
    17425 > show to_show
    17426 
    17427 > hbonds to_hbond restrict to_show color yellow
    17428 
    17429 16 hydrogen bonds found 
    17430 
    17431 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    17432 
    17433 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    17434 
    17435 > color #1.2/a:2582 medium purple
    17436 
    17437 > color #1.2/a:2583 royal blue
    17438 
    17439 > color #1.2 white
    17440 
    17441 > color #1.2/Y orchid
    17442 
    17443 > color #1.2/a:2551
    17444 
    17445 > color #1.2/a:2552 pale violet red
    17446 
    17447 > color #1.2/a:2553 khaki
    17448 
    17449 > color #1.2/a:2554 green yellow
    17450 
    17451 > color #1.2/a:2555 aquamarine
    17452 
    17453 > color #1.2/a:2556 steel blue
    17454 
    17455 > color #1.2/a:2582 medium purple
    17456 
    17457 > color #1.2/a:2583 royal blue
    17458 
    17459 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    17460 
    17461 > view A_loop
    17462 
    17463 > hide #1.2
    17464 
    17465 > ~cartoon #1.2
    17466 
    17467 > name to_cartoon #1.2/a:2550-2558
    17468 
    17469 > name to_hbond #1.2/a:1955,2551-2557,2581-2584
    17470 
    17471 > name to_show to_hbond|to_cartoon
    17472 
    17473 > cartoon to_cartoon
    17474 
    17475 > show to_show
    17476 
    17477 > hbonds to_hbond restrict to_show color yellow
    17478 
    17479 9 hydrogen bonds found 
    17480 
    17481 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    17482 
    17483 > name to_show to_hbond|to_cartoon|#1.2/Y:73-76
    17484 
    17485 > show to_show
    17486 
    17487 > color #1.2 white
    17488 
    17489 > color #1.2/a:2552 pale violet red
    17490 
    17491 > color #1.2/a:2553 khaki
    17492 
    17493 > color #1.2/a:2554 green yellow
    17494 
    17495 > color #1.2/a:2555 aquamarine
    17496 
    17497 > color #1.2/a:2556 steel blue
    17498 
    17499 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    17500 
    17501 > color #1.2/Y orchid
    17502 
    17503 > color #1.2/a:2582 medium purple
    17504 
    17505 > color #1.2/a:2583 royal blue
    17506 
    17507 > view A_loop
    17508 
    17509 > hide #1.2
    17510 
    17511 > ~cartoon #1.2
    17512 
    17513 > name to_cartoon #1.2/a:2550-2558
    17514 
    17515 > name to_hbond #1.2/a:1955,2551-2557,2581-2584
    17516 
    17517 > name to_show to_hbond|to_cartoon|#1.2/Y:73-76
    17518 
    17519 > cartoon to_cartoon
    17520 
    17521 > show to_show
    17522 
    17523 > hbonds to_hbond restrict to_show color yellow
    17524 
    17525 16 hydrogen bonds found 
    17526 
    17527 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    17528 
    17529 > color #1.2 white
    17530 
    17531 > color #1.2/a:2552 pale violet red
    17532 
    17533 > color #1.2/a:2553 khaki
    17534 
    17535 > color #1.2/a:2554 green yellow
    17536 
    17537 > color #1.2/a:2555 aquamarine
    17538 
    17539 > color #1.2/a:2556 steel blue
    17540 
    17541 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    17542 
    17543 > color #1.2/Y orchid
    17544 
    17545 > color #1.2/a:2582 medium purple
    17546 
    17547 > color #1.2/a:2583 royal blue
    17548 
    17549 > view A_loop
    17550 
    17551 > hide #1.2
    17552 
    17553 > ~cartoon #1.2
    17554 
    17555 > name to_cartoon #1.2/a:2549-2559
    17556 
    17557 > name to_hbond #1.2/a:1955,2551-2557,2581-2584
    17558 
    17559 > name to_show to_hbond|to_cartoon|#1.2/Y:73-76
    17560 
    17561 > cartoon to_cartoon
    17562 
    17563 > show to_show
    17564 
    17565 > hbonds to_hbond restrict to_show color yellow
    17566 
    17567 16 hydrogen bonds found 
    17568 
    17569 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    17570 
    17571 > graphics silhouettes false
    17572 
    17573 > color #1.2 white
    17574 
    17575 > color #1.2/a:2552 pale violet red
    17576 
    17577 > color #1.2/a:2553 khaki
    17578 
    17579 > color #1.2/a:2554 green yellow
    17580 
    17581 > color #1.2/a:2555 aquamarine
    17582 
    17583 > color #1.2/a:2556 steel blue
    17584 
    17585 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    17586 
    17587 > color #1.2/Y orchid
    17588 
    17589 > color #1.2/a:2582 medium purple
    17590 
    17591 > color #1.2/a:2583 royal blue
    17592 
    17593 > view A_loop
    17594 
    17595 > hide #1.2
    17596 
    17597 > ~cartoon #1.2
    17598 
    17599 > name to_cartoon #1.2/a:2549-2559
    17600 
    17601 > name to_hbond #1.2/a:1955,2551-2557,2581-2584
    17602 
    17603 > name to_show to_hbond|to_cartoon|#1.2/Y:73-76
    17604 
    17605 > cartoon to_cartoon
    17606 
    17607 > show to_show
    17608 
    17609 > hbonds to_hbond restrict to_show color yellow
    17610 
    17611 16 hydrogen bonds found 
    17612 
    17613 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    17614 
    17615 > select to_show
    17616 
    17617 426 atoms, 471 bonds, 16 pseudobonds, 20 residues, 2 models selected 
    17618 
    17619 > ~select
    17620 
    17621 Nothing selected 
    17622 
    17623 > graphics silhouettes true
    17624 
    17625 > graphics silhouettes false
    17626 
    17627 > select to_show
    17628 
    17629 426 atoms, 471 bonds, 16 pseudobonds, 20 residues, 2 models selected 
    17630 
    17631 > ~select
    17632 
    17633 Nothing selected 
    17634 
    17635 > graphics silhouettes true
    17636 
    17637 > combine to_cartoon close false modelId 999 name to_cartoon
    17638 
    17639 > ~cartoon #1.2
    17640 
    17641 > cartoon to_cartoon
    17642 
    17643 > ~cartoon #1.2
    17644 
    17645 > hide #!999 models
    17646 
    17647 > show #!999 models
    17648 
    17649 > hide #!999 models
    17650 
    17651 > show #!999 models
    17652 
    17653 > hide #!999 models
    17654 
    17655 > show #!999 models
    17656 
    17657 > cartoon suppressBackboneDisplay true
    17658 
    17659 > cartoon tether opacity 0 target All
    17660 
    17661 Expected a keyword 
    17662 
    17663 > cartoon tether opacity 0
    17664 
    17665 > cartoon tether opacity 1
    17666 
    17667 > hide #!999 models
    17668 
    17669 > ~cartoon #1.2
    17670 
    17671 > show #!999 models
    17672 
    17673 > hide #!999 models
    17674 
    17675 > show #!999 models
    17676 
    17677 > hide #!999 models
    17678 
    17679 > show #!999 models
    17680 
    17681 > hide #!1.2 models
    17682 
    17683 > show #!1.2 models
    17684 
    17685 > hide #!1.2 models
    17686 
    17687 > show #!1.2 models
    17688 
    17689 > ~show #999
    17690 
    17691 > ~cartoon #999
    17692 
    17693 > hide #!1.2 models
    17694 
    17695 > cartoon #999
    17696 
    17697 > delete #999
    17698 
    17699 > combine #1.2/Y
    17700 
    17701 > hide #!7 models
    17702 
    17703 > show #!7 models
    17704 
    17705 > hide #!7 models
    17706 
    17707 > show #!7 models
    17708 
    17709 > close #7
    17710 
    17711 > combine #6.1
    17712 
    17713 > close #7
    17714 
    17715 > combine #6.1 close false modelId 999 name to_cartoon
    17716 
    17717 > delete #999:a,v,Y,Z
    17718 
    17719 > hide #!999 models
    17720 
    17721 > show #!999 models
    17722 
    17723 > hide #999
    17724 
    17725 > ~cartoon #999
    17726 
    17727 > show #999
    17728 
    17729 > delete atoms #999:a,v,Y,Z
    17730 
    17731 > delete atoms #999/a,v,Y,Z
    17732 
    17733 > delete atoms #999/a,e,v,Y,Z,3
    17734 
    17735 > delete atoms #999/a,e,l,v,Y,Z,3
    17736 
    17737 > delete atoms #999/a,b,e,l,v,Y,Z,3
    17738 
    17739 > delete atoms #999/a,b,c,e,l,v,Y,Z,3
    17740 
    17741 > delete #999
    17742 
    17743 > combine #1.2
    17744 
    17745 > hide #999
    17746 
    17747 > hide #1.2
    17748 
    17749 > close #7
    17750 
    17751 > windowsize 700 500
    17752 
    17753 > hide #1.2
    17754 
    17755 > ~cartoon #1.2
    17756 
    17757 > color #1.2 white
    17758 
    17759 > combine #1.2 modelId 999 name cartoon
    17760 
    17761 > color #1.2/a:2552 pale violet red
    17762 
    17763 > color #1.2/a:2553 khaki
    17764 
    17765 > color #1.2/a:2554 green yellow
    17766 
    17767 > color #1.2/a:2555 aquamarine
    17768 
    17769 > color #1.2/a:2556 steel blue
    17770 
    17771 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    17772 
    17773 > color #1.2/Y orchid
    17774 
    17775 > color #1.2/a:2582 medium purple
    17776 
    17777 > color #1.2/a:2583 royal blue
    17778 
    17779 > name to_cartoon #999/a:2549-2559
    17780 
    17781 > name to_hbond #1.2/a:1955,2551-2557,2581-2584
    17782 
    17783 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    17784 
    17785 > cartoon to_cartoon
    17786 
    17787 > show to_show
    17788 
    17789 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    17790 
    17791 > hbonds to_hbond restrict to_show color yellow
    17792 
    17793 16 hydrogen bonds found 
    17794 
    17795 > view A_loop
    17796 
    17797 > show to_show
    17798 
    17799 > show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    17800 
    17801 > show #1.2/a:1955
    17802 
    17803 > show #!1.2 models
    17804 
    17805 > windowsize 500 700
    17806 
    17807 > hide #1.2
    17808 
    17809 > ~cartoon #1.2
    17810 
    17811 > color #1.2 white
    17812 
    17813 > combine #1.2 modelId 999 name cartoon
    17814 
    17815 Traceback (most recent call last): 
    17816 File
    17817 "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
    17818 packages/chimerax/cmd_line/tool.py", line 319, in execute 
    17819 cmd.run(cmd_text) 
    17820 File
    17821 "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
    17822 packages/chimerax/core/commands/cli.py", line 2908, in run 
    17823 result = ci.function(session, **kw_args) 
    17824 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 
    17825 File
    17826 "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
    17827 packages/chimerax/atomic/cmd.py", line 91, in combine_cmd 
    17828 session.models.add([combination]) 
    17829 File
    17830 "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
    17831 packages/chimerax/core/models.py", line 733, in add 
    17832 p = self._parent_for_added_model(model, parent, root_model = root_model) 
    17833 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 
    17834 File
    17835 "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
    17836 packages/chimerax/core/models.py", line 802, in _parent_for_added_model 
    17837 raise ValueError('Tried to add model %s with the same id as another model %s' 
    17838 ValueError: Tried to add model cartoon #999 with the same id as another model
    17839 cartoon #999 
    17840  
    17841 ValueError: Tried to add model cartoon #999 with the same id as another model
    17842 cartoon #999 
    17843  
    17844 File
    17845 "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-
    17846 packages/chimerax/core/models.py", line 802, in _parent_for_added_model 
    17847 raise ValueError('Tried to add model %s with the same id as another model %s' 
    17848  
    17849 See log for complete Python traceback. 
    17850  
    17851 
    17852 > windowsize 600 600
    17853 
    17854 > hide #1.2
    17855 
    17856 > ~cartoon #1.2
    17857 
    17858 > color #1.2 white
    17859 
    17860 > delete #999
    17861 
    17862 > combine #1.2 modelId 999 name cartoon
    17863 
    17864 > color #1.2/a:2552 pale violet red
    17865 
    17866 > color #1.2/a:2553 khaki
    17867 
    17868 > color #1.2/a:2554 green yellow
    17869 
    17870 > color #1.2/a:2555 aquamarine
    17871 
    17872 > color #1.2/a:2556 steel blue
    17873 
    17874 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    17875 
    17876 > color #1.2/Y orchid
    17877 
    17878 > color #1.2/a:2582 medium purple
    17879 
    17880 > color #1.2/a:2583 royal blue
    17881 
    17882 > name to_cartoon #999/a:2549-2559
    17883 
    17884 > name to_hbond #1.2/a:1955,2551-2557,2581-2584
    17885 
    17886 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    17887 
    17888 > cartoon to_cartoon
    17889 
    17890 > show to_show
    17891 
    17892 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    17893 
    17894 > hbonds to_hbond restrict to_show color yellow
    17895 
    17896 16 hydrogen bonds found 
    17897 
    17898 > view A_loop
    17899 
    17900 > view name A_loop
    17901 
    17902 [Repeated 1 time(s)]
    17903 
    17904 > view matrix
    17905 
    17906 view matrix camera
    17907 -0.63711,0.60925,-0.47213,121.73,0.7408,0.31484,-0.59337,145.44,-0.21286,-0.7278,-0.65192,119.58 
    17908 view matrix models
    17909 #1,1,0,0,0,0,1,0,0,0,0,1,0,#1.3,1,0,0,0,0,1,0,0,0,0,1,0,#1.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.5,1,0,0,0,0,1,0,0,0,0,1,0,#1.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.6,1,0,0,0,0,1,0,0,0,0,1,0,#1.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.7,1,0,0,0,0,1,0,0,0,0,1,0,#1.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.8,1,0,0,0,0,1,0,0,0,0,1,0,#1.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.9,1,0,0,0,0,1,0,0,0,0,1,0,#1.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.10,1,0,0,0,0,1,0,0,0,0,1,0,#1.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.11,1,0,0,0,0,1,0,0,0,0,1,0,#1.11.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.12,1,0,0,0,0,1,0,0,0,0,1,0,#1.12.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.12.2,1,0,0,0,0,1,0,0,0,0,1,0,#1.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.2,1,0,0,0,0,1,0,0,0,0,1,0,#1.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#2,1,0,0,0,0,1,0,0,0,0,1,0,#2.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.2,1,0,0,0,0,1,0,0,0,0,1,0,#2.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.3,1,0,0,0,0,1,0,0,0,0,1,0,#2.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.4,1,0,0,0,0,1,0,0,0,0,1,0,#2.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.5,1,0,0,0,0,1,0,0,0,0,1,0,#2.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.6,1,0,0,0,0,1,0,0,0,0,1,0,#2.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#3,1,0,0,0,0,1,0,0,0,0,1,0,#3.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.2,1,0,0,0,0,1,0,0,0,0,1,0,#3.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.3,1,0,0,0,0,1,0,0,0,0,1,0,#3.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.4,1,0,0,0,0,1,0,0,0,0,1,0,#3.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.5,1,0,0,0,0,1,0,0,0,0,1,0,#3.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.6,1,0,0,0,0,1,0,0,0,0,1,0,#3.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#4,1,0,0,0,0,1,0,0,0,0,1,0,#4.10,1,0,0,0,0,1,0,0,0,0,1,0,#4.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.2,1,0,0,0,0,1,0,0,0,0,1,0,#4.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.3,1,0,0,0,0,1,0,0,0,0,1,0,#4.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.4,1,0,0,0,0,1,0,0,0,0,1,0,#4.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.5,1,0,0,0,0,1,0,0,0,0,1,0,#4.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.6,1,0,0,0,0,1,0,0,0,0,1,0,#4.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.7,1,0,0,0,0,1,0,0,0,0,1,0,#4.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.8,1,0,0,0,0,1,0,0,0,0,1,0,#4.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.9,1,0,0,0,0,1,0,0,0,0,1,0,#4.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#5,1,0,0,0,0,1,0,0,0,0,1,0,#5.10,1,0,0,0,0,1,0,0,0,0,1,0,#5.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.2,1,0,0,0,0,1,0,0,0,0,1,0,#5.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.3,1,0,0,0,0,1,0,0,0,0,1,0,#5.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.4,1,0,0,0,0,1,0,0,0,0,1,0,#5.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.5,1,0,0,0,0,1,0,0,0,0,1,0,#5.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.6,1,0,0,0,0,1,0,0,0,0,1,0,#5.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.7,1,0,0,0,0,1,0,0,0,0,1,0,#5.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.8,1,0,0,0,0,1,0,0,0,0,1,0,#5.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.9,1,0,0,0,0,1,0,0,0,0,1,0,#5.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#6,1,0,0,0,0,1,0,0,0,0,1,0,#6.10,1,0,0,0,0,1,0,0,0,0,1,0,#6.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.3,1,0,0,0,0,1,0,0,0,0,1,0,#6.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.4,1,0,0,0,0,1,0,0,0,0,1,0,#6.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.5,1,0,0,0,0,1,0,0,0,0,1,0,#6.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.6,1,0,0,0,0,1,0,0,0,0,1,0,#6.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.7,1,0,0,0,0,1,0,0,0,0,1,0,#6.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.8,1,0,0,0,0,1,0,0,0,0,1,0,#6.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.9,1,0,0,0,0,1,0,0,0,0,1,0,#6.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#10,1,0,0,0,0,1,0,0,0,0,1,0,#10.1,1,0,0,0,0,1,0,0,0,0,1,0,#10.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#10.2,1,0,0,0,0,1,0,0,0,0,1,0,#10.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#10.3,1,0,0,0,0,1,0,0,0,0,1,0,#10.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#11,1,0,0,0,0,1,0,0,0,0,1,0,#11.1,1,0,0,0,0,1,0,0,0,0,1,0,#11.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#11.2,1,0,0,0,0,1,0,0,0,0,1,0,#11.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#11.3,1,0,0,0,0,1,0,0,0,0,1,0,#11.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#12,1,0,0,0,0,1,0,0,0,0,1,0,#12.10,1,0,0,0,0,1,0,0,0,0,1,0,#12.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.2,1,0,0,0,0,1,0,0,0,0,1,0,#12.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.3,1,0,0,0,0,1,0,0,0,0,1,0,#12.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.4,1,0,0,0,0,1,0,0,0,0,1,0,#12.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.5,1,0,0,0,0,1,0,0,0,0,1,0,#12.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.6,1,0,0,0,0,1,0,0,0,0,1,0,#12.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.7,1,0,0,0,0,1,0,0,0,0,1,0,#12.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.8,1,0,0,0,0,1,0,0,0,0,1,0,#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#999,1,0,0,0,0,1,0,0,0,0,1,0,#999.1,1,0,0,0,0,1,0,0,0,0,1,0,#999.2,1,0,0,0,0,1,0,0,0,0,1,0 
    17910  
    17911 
    17912 > clip list
    17913 
    17914 Using 2 clip planes: 
    17915 near offset -13.905, axis 0.472,0.593,0.652, point 137.5,165.2,141.3) 
    17916 far offset 8.0784, axis -0.472,-0.593,-0.652, point 147.8,178.3,155.6) 
    17917 
    17918 > view name A_loop
    17919 
    17920 > view matrix
    17921 
    17922 view matrix camera
    17923 -0.73046,0.61978,-0.28688,130.08,0.57465,0.33079,-0.74857,138.95,-0.36905,-0.71166,-0.59779,122.29 
    17924 view matrix models
    17925 #1,1,0,0,0,0,1,0,0,0,0,1,0,#1.3,1,0,0,0,0,1,0,0,0,0,1,0,#1.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.5,1,0,0,0,0,1,0,0,0,0,1,0,#1.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.6,1,0,0,0,0,1,0,0,0,0,1,0,#1.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.7,1,0,0,0,0,1,0,0,0,0,1,0,#1.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.8,1,0,0,0,0,1,0,0,0,0,1,0,#1.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.9,1,0,0,0,0,1,0,0,0,0,1,0,#1.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.10,1,0,0,0,0,1,0,0,0,0,1,0,#1.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.11,1,0,0,0,0,1,0,0,0,0,1,0,#1.11.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.12,1,0,0,0,0,1,0,0,0,0,1,0,#1.12.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.12.2,1,0,0,0,0,1,0,0,0,0,1,0,#1.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.2,1,0,0,0,0,1,0,0,0,0,1,0,#1.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#2,1,0,0,0,0,1,0,0,0,0,1,0,#2.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.2,1,0,0,0,0,1,0,0,0,0,1,0,#2.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.3,1,0,0,0,0,1,0,0,0,0,1,0,#2.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.4,1,0,0,0,0,1,0,0,0,0,1,0,#2.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.5,1,0,0,0,0,1,0,0,0,0,1,0,#2.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.6,1,0,0,0,0,1,0,0,0,0,1,0,#2.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#3,1,0,0,0,0,1,0,0,0,0,1,0,#3.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.2,1,0,0,0,0,1,0,0,0,0,1,0,#3.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.3,1,0,0,0,0,1,0,0,0,0,1,0,#3.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.4,1,0,0,0,0,1,0,0,0,0,1,0,#3.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.5,1,0,0,0,0,1,0,0,0,0,1,0,#3.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.6,1,0,0,0,0,1,0,0,0,0,1,0,#3.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#4,1,0,0,0,0,1,0,0,0,0,1,0,#4.10,1,0,0,0,0,1,0,0,0,0,1,0,#4.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.2,1,0,0,0,0,1,0,0,0,0,1,0,#4.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.3,1,0,0,0,0,1,0,0,0,0,1,0,#4.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.4,1,0,0,0,0,1,0,0,0,0,1,0,#4.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.5,1,0,0,0,0,1,0,0,0,0,1,0,#4.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.6,1,0,0,0,0,1,0,0,0,0,1,0,#4.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.7,1,0,0,0,0,1,0,0,0,0,1,0,#4.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.8,1,0,0,0,0,1,0,0,0,0,1,0,#4.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.9,1,0,0,0,0,1,0,0,0,0,1,0,#4.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#5,1,0,0,0,0,1,0,0,0,0,1,0,#5.10,1,0,0,0,0,1,0,0,0,0,1,0,#5.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.2,1,0,0,0,0,1,0,0,0,0,1,0,#5.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.3,1,0,0,0,0,1,0,0,0,0,1,0,#5.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.4,1,0,0,0,0,1,0,0,0,0,1,0,#5.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.5,1,0,0,0,0,1,0,0,0,0,1,0,#5.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.6,1,0,0,0,0,1,0,0,0,0,1,0,#5.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.7,1,0,0,0,0,1,0,0,0,0,1,0,#5.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.8,1,0,0,0,0,1,0,0,0,0,1,0,#5.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.9,1,0,0,0,0,1,0,0,0,0,1,0,#5.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#6,1,0,0,0,0,1,0,0,0,0,1,0,#6.10,1,0,0,0,0,1,0,0,0,0,1,0,#6.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.3,1,0,0,0,0,1,0,0,0,0,1,0,#6.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.4,1,0,0,0,0,1,0,0,0,0,1,0,#6.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.5,1,0,0,0,0,1,0,0,0,0,1,0,#6.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.6,1,0,0,0,0,1,0,0,0,0,1,0,#6.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.7,1,0,0,0,0,1,0,0,0,0,1,0,#6.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.8,1,0,0,0,0,1,0,0,0,0,1,0,#6.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.9,1,0,0,0,0,1,0,0,0,0,1,0,#6.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#10,1,0,0,0,0,1,0,0,0,0,1,0,#10.1,1,0,0,0,0,1,0,0,0,0,1,0,#10.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#10.2,1,0,0,0,0,1,0,0,0,0,1,0,#10.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#10.3,1,0,0,0,0,1,0,0,0,0,1,0,#10.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#11,1,0,0,0,0,1,0,0,0,0,1,0,#11.1,1,0,0,0,0,1,0,0,0,0,1,0,#11.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#11.2,1,0,0,0,0,1,0,0,0,0,1,0,#11.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#11.3,1,0,0,0,0,1,0,0,0,0,1,0,#11.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#12,1,0,0,0,0,1,0,0,0,0,1,0,#12.10,1,0,0,0,0,1,0,0,0,0,1,0,#12.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.2,1,0,0,0,0,1,0,0,0,0,1,0,#12.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.3,1,0,0,0,0,1,0,0,0,0,1,0,#12.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.4,1,0,0,0,0,1,0,0,0,0,1,0,#12.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.5,1,0,0,0,0,1,0,0,0,0,1,0,#12.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.6,1,0,0,0,0,1,0,0,0,0,1,0,#12.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.7,1,0,0,0,0,1,0,0,0,0,1,0,#12.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.8,1,0,0,0,0,1,0,0,0,0,1,0,#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#999,1,0,0,0,0,1,0,0,0,0,1,0,#999.1,1,0,0,0,0,1,0,0,0,0,1,0,#999.2,1,0,0,0,0,1,0,0,0,0,1,0 
    17926  
    17927 
    17928 > clip list
    17929 
    17930 Using 2 clip planes: 
    17931 near offset -12.955, axis 0.287,0.749,0.598, point 139.6,163.9,142.2) 
    17932 far offset 9.0278, axis -0.287,-0.749,-0.598, point 145.9,180.4,155.4) 
    17933 
    17934 > view name A_loop
    17935 
    17936 > view matrix
    17937 
    17938 view matrix camera
    17939 -0.67442,0.62693,-0.39002,125.42,0.68998,0.34709,-0.63518,143.71,-0.26284,-0.69749,-0.66665,119.04 
    17940 view matrix models
    17941 #1,1,0,0,0,0,1,0,0,0,0,1,0,#1.3,1,0,0,0,0,1,0,0,0,0,1,0,#1.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.5,1,0,0,0,0,1,0,0,0,0,1,0,#1.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.6,1,0,0,0,0,1,0,0,0,0,1,0,#1.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.7,1,0,0,0,0,1,0,0,0,0,1,0,#1.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.8,1,0,0,0,0,1,0,0,0,0,1,0,#1.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.9,1,0,0,0,0,1,0,0,0,0,1,0,#1.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.10,1,0,0,0,0,1,0,0,0,0,1,0,#1.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.11,1,0,0,0,0,1,0,0,0,0,1,0,#1.11.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.12,1,0,0,0,0,1,0,0,0,0,1,0,#1.12.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.12.2,1,0,0,0,0,1,0,0,0,0,1,0,#1.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.2,1,0,0,0,0,1,0,0,0,0,1,0,#1.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#2,1,0,0,0,0,1,0,0,0,0,1,0,#2.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.2,1,0,0,0,0,1,0,0,0,0,1,0,#2.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.3,1,0,0,0,0,1,0,0,0,0,1,0,#2.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.4,1,0,0,0,0,1,0,0,0,0,1,0,#2.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.5,1,0,0,0,0,1,0,0,0,0,1,0,#2.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.6,1,0,0,0,0,1,0,0,0,0,1,0,#2.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#3,1,0,0,0,0,1,0,0,0,0,1,0,#3.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.2,1,0,0,0,0,1,0,0,0,0,1,0,#3.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.3,1,0,0,0,0,1,0,0,0,0,1,0,#3.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.4,1,0,0,0,0,1,0,0,0,0,1,0,#3.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.5,1,0,0,0,0,1,0,0,0,0,1,0,#3.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.6,1,0,0,0,0,1,0,0,0,0,1,0,#3.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#4,1,0,0,0,0,1,0,0,0,0,1,0,#4.10,1,0,0,0,0,1,0,0,0,0,1,0,#4.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.2,1,0,0,0,0,1,0,0,0,0,1,0,#4.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.3,1,0,0,0,0,1,0,0,0,0,1,0,#4.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.4,1,0,0,0,0,1,0,0,0,0,1,0,#4.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.5,1,0,0,0,0,1,0,0,0,0,1,0,#4.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.6,1,0,0,0,0,1,0,0,0,0,1,0,#4.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.7,1,0,0,0,0,1,0,0,0,0,1,0,#4.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.8,1,0,0,0,0,1,0,0,0,0,1,0,#4.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.9,1,0,0,0,0,1,0,0,0,0,1,0,#4.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#5,1,0,0,0,0,1,0,0,0,0,1,0,#5.10,1,0,0,0,0,1,0,0,0,0,1,0,#5.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.2,1,0,0,0,0,1,0,0,0,0,1,0,#5.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.3,1,0,0,0,0,1,0,0,0,0,1,0,#5.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.4,1,0,0,0,0,1,0,0,0,0,1,0,#5.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.5,1,0,0,0,0,1,0,0,0,0,1,0,#5.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.6,1,0,0,0,0,1,0,0,0,0,1,0,#5.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.7,1,0,0,0,0,1,0,0,0,0,1,0,#5.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.8,1,0,0,0,0,1,0,0,0,0,1,0,#5.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.9,1,0,0,0,0,1,0,0,0,0,1,0,#5.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#6,1,0,0,0,0,1,0,0,0,0,1,0,#6.10,1,0,0,0,0,1,0,0,0,0,1,0,#6.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.3,1,0,0,0,0,1,0,0,0,0,1,0,#6.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.4,1,0,0,0,0,1,0,0,0,0,1,0,#6.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.5,1,0,0,0,0,1,0,0,0,0,1,0,#6.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.6,1,0,0,0,0,1,0,0,0,0,1,0,#6.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.7,1,0,0,0,0,1,0,0,0,0,1,0,#6.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.8,1,0,0,0,0,1,0,0,0,0,1,0,#6.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.9,1,0,0,0,0,1,0,0,0,0,1,0,#6.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#10,1,0,0,0,0,1,0,0,0,0,1,0,#10.1,1,0,0,0,0,1,0,0,0,0,1,0,#10.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#10.2,1,0,0,0,0,1,0,0,0,0,1,0,#10.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#10.3,1,0,0,0,0,1,0,0,0,0,1,0,#10.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#11,1,0,0,0,0,1,0,0,0,0,1,0,#11.1,1,0,0,0,0,1,0,0,0,0,1,0,#11.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#11.2,1,0,0,0,0,1,0,0,0,0,1,0,#11.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#11.3,1,0,0,0,0,1,0,0,0,0,1,0,#11.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#12,1,0,0,0,0,1,0,0,0,0,1,0,#12.10,1,0,0,0,0,1,0,0,0,0,1,0,#12.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.2,1,0,0,0,0,1,0,0,0,0,1,0,#12.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.3,1,0,0,0,0,1,0,0,0,0,1,0,#12.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.4,1,0,0,0,0,1,0,0,0,0,1,0,#12.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.5,1,0,0,0,0,1,0,0,0,0,1,0,#12.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.6,1,0,0,0,0,1,0,0,0,0,1,0,#12.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.7,1,0,0,0,0,1,0,0,0,0,1,0,#12.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.8,1,0,0,0,0,1,0,0,0,0,1,0,#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#999,1,0,0,0,0,1,0,0,0,0,1,0,#999.1,1,0,0,0,0,1,0,0,0,0,1,0,#999.2,1,0,0,0,0,1,0,0,0,0,1,0 
    17942  
    17943 
    17944 > clip list
    17945 
    17946 Using 2 clip planes: 
    17947 near offset -13.658, axis 0.390,0.635,0.667, point 138.4,164.9,141.3) 
    17948 far offset 8.3252, axis -0.390,-0.635,-0.667, point 147,178.8,155.9) 
    17949 
    17950 > show #!1.1 models
    17951 
    17952 > hide #!1.1 models
    17953 
    17954 > lighting simple
    17955 
    17956 > graphics silhouettes false
    17957 
    17958 > graphics silhouettes true
    17959 
    17960 > color to_show&:O? red
    17961 
    17962 > color to_show&@O? red
    17963 
    17964 > color to_show&@N? blue
    17965 
    17966 > hbonds to_hbond restrict to_show color yellow
    17967 
    17968 16 hydrogen bonds found 
    17969 
    17970 > graphics quality 7
    17971 
    17972 > graphics quality 6
    17973 
    17974 > save /Users/dalar193/Desktop/image93.png supersample 3
    17975 
    17976 > save /Users/dalar193/Desktop/image94.png supersample 3
    17977 
    17978 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    17979 
    17980 > save /Users/dalar193/Desktop/image95.png supersample 3
    17981 
    17982 > show #!1.1 models
    17983 
    17984 > hide #!1.1 models
    17985 
    17986 > color to_show&@P? orange
    17987 
    17988 > color to_show&@P orange
    17989 
    17990 > color to_show&@P white
    17991 
    17992 > color to_show&@O?,O?' red
    17993 
    17994 > color to_show&@N?,N?' blue
    17995 
    17996 > hbonds to_hbond restrict to_show color yellow
    17997 
    17998 16 hydrogen bonds found 
    17999 
    18000 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    18001 
    18002 > color to_show&@O* red
    18003 
    18004 > color to_show&@N* blue
    18005 
    18006 > color to_show&@P orange
    18007 
    18008 > hbonds to_hbond restrict to_show color yellow
    18009 
    18010 16 hydrogen bonds found 
    18011 
    18012 > color #1.2/a:2552 pale violet red
    18013 
    18014 > color #1.2/a:2553 khaki
    18015 
    18016 > color #1.2/a:2554 green yellow
    18017 
    18018 > color #1.2/a:2555 aquamarine
    18019 
    18020 > color #1.2/a:2556 steel blue
    18021 
    18022 > color #1.2/Y orchid
    18023 
    18024 > color #1.2/a:2582 medium purple
    18025 
    18026 > color #1.2/a:2583 royal blue
    18027 
    18028 > color to_show&@O* red
    18029 
    18030 > color to_show&@N* blue
    18031 
    18032 > color to_show&@P orange
    18033 
    18034 > hbonds to_hbond restrict to_show color yellow
    18035 
    18036 16 hydrogen bonds found 
    18037 
    18038 > lighting soft
    18039 
    18040 > lighting simple
    18041 
    18042 > lighting full
    18043 
    18044 > lighting simple
    18045 
    18046 > lighting soft
    18047 
    18048 > lighting full
    18049 
    18050 > lighting simple
    18051 
    18052 > lighting full
    18053 
    18054 > lighting simple
    18055 
    18056 > hide #!1.2 models
    18057 
    18058 > hide #!999 models
    18059 
    18060 > show #!6.10 models
    18061 
    18062 > hide 6.10
    18063 
    18064 Expected a collection of one of 'atoms', 'bonds', 'cartoons', 'models',
    18065 'pbonds', 'pseudobonds', 'ribbons', or 'surfaces' or a keyword 
    18066 
    18067 > ~cartoon 6.10
    18068 
    18069 > cartoon hide 6.10
    18070 
    18071 Expected an atoms specifier or a keyword 
    18072 
    18073 > color 6.10 white
    18074 
    18075 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18076 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18077 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18078 
    18079 > delete #999
    18080 
    18081 > combine 6.10 modelId 999 name cartoon
    18082 
    18083 Expected a keyword 
    18084 
    18085 > color 6.10/a:2552 pale violet red
    18086 
    18087 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18088 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18089 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18090 
    18091 > color 6.10/a:2553 khaki
    18092 
    18093 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18094 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18095 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18096 
    18097 > color 6.10/a:2554 green yellow
    18098 
    18099 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18100 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18101 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18102 
    18103 > color 6.10/a:2555 aquamarine
    18104 
    18105 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18106 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18107 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18108 
    18109 > color 6.10/a:2556 steel blue
    18110 
    18111 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18112 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18113 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18114 
    18115 > color 6.10/Y orchid
    18116 
    18117 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18118 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18119 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18120 
    18121 > color 6.10/a:2582 medium purple
    18122 
    18123 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18124 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18125 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18126 
    18127 > color 6.10/a:2583 royal blue
    18128 
    18129 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18130 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18131 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18132 
    18133 > color to_show&@O* red
    18134 
    18135 > color to_show&@N* blue
    18136 
    18137 > color to_show&@P orange
    18138 
    18139 > name to_cartoon #999/a:2549-2559
    18140 
    18141 > name to_hbond 6.10/a:1955,2550-2558,2581-2584
    18142 
    18143 "6.10/a:1955,2550-2558,2581-2584": invalid atom specifier 
    18144 
    18145 > name to_show 6.10/a:1955,2549-2559,2581-2584/Y:73-76
    18146 
    18147 "6.10/a:1955,2549-2559,2581-2584/Y:73-76": invalid atom specifier 
    18148 
    18149 > cartoon to_cartoon
    18150 
    18151 > show to_show
    18152 
    18153 > hide 6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    18154 
    18155 Expected a collection of one of 'atoms', 'bonds', 'cartoons', 'models',
    18156 'pbonds', 'pseudobonds', 'ribbons', or 'surfaces' or a keyword 
    18157 
    18158 > hbonds to_hbond restrict to_show color yellow
    18159 
    18160 16 hydrogen bonds found 
    18161 
    18162 > save /Users/dalar193/Desktop/d9-PTC-overview/d9-PTC-overview_d9_J83_cl0.png
    18163 > height 600 width 600 supersample 3
    18164 
    18165 > hide #!6.10 models
    18166 
    18167 > show #!6.10 models
    18168 
    18169 > hide 6.10
    18170 
    18171 Expected a collection of one of 'atoms', 'bonds', 'cartoons', 'models',
    18172 'pbonds', 'pseudobonds', 'ribbons', or 'surfaces' or a keyword 
    18173 
    18174 > ~cartoon 6.10
    18175 
    18176 > cartoon hide 6.10
    18177 
    18178 Expected an atoms specifier or a keyword 
    18179 
    18180 > color 6.10 white
    18181 
    18182 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18183 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18184 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18185 
    18186 > delete #999
    18187 
    18188 > combine 6.10 modelId 999 name cartoon
    18189 
    18190 Expected a keyword 
    18191 
    18192 > color 6.10/a:2552 pale violet red
    18193 
    18194 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18195 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18196 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18197 
    18198 > color 6.10/a:2553 khaki
    18199 
    18200 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18201 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18202 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18203 
    18204 > color 6.10/a:2554 green yellow
    18205 
    18206 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18207 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18208 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18209 
    18210 > color 6.10/a:2555 aquamarine
    18211 
    18212 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18213 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18214 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18215 
    18216 > color 6.10/a:2556 steel blue
    18217 
    18218 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18219 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18220 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18221 
    18222 > color 6.10/Y orchid
    18223 
    18224 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18225 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18226 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18227 
    18228 > color 6.10/a:2582 medium purple
    18229 
    18230 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18231 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18232 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18233 
    18234 > color 6.10/a:2583 royal blue
    18235 
    18236 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18237 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18238 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18239 
    18240 > color to_show&@O* red
    18241 
    18242 > color to_show&@N* blue
    18243 
    18244 > color to_show&@P orange
    18245 
    18246 > name to_cartoon #999/a:2549-2559
    18247 
    18248 > name to_hbond 6.10/a:1955,2550-2558,2581-2584
    18249 
    18250 "6.10/a:1955,2550-2558,2581-2584": invalid atom specifier 
    18251 
    18252 > name to_show 6.10/a:1955,2549-2559,2581-2584/Y:73-76
    18253 
    18254 "6.10/a:1955,2549-2559,2581-2584/Y:73-76": invalid atom specifier 
    18255 
    18256 > cartoon to_cartoon
    18257 
    18258 > show to_show
    18259 
    18260 > hide 6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    18261 
    18262 Expected a collection of one of 'atoms', 'bonds', 'cartoons', 'models',
    18263 'pbonds', 'pseudobonds', 'ribbons', or 'surfaces' or a keyword 
    18264 
    18265 > hbonds to_hbond restrict to_show color yellow
    18266 
    18267 16 hydrogen bonds found 
    18268 
    18269 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J83_cl0.png height 600 width
    18270 > 600 supersample 3
    18271 
    18272 > hide #!6.10 models
    18273 
    18274 > delete #999
    18275 
    18276 > cartoon suppressBackboneDisplay false
    18277 
    18278 > cartoon tether scale 0
    18279 
    18280 > hide #1.2
    18281 
    18282 > ~cartoon #1.2
    18283 
    18284 > color #1.2 white
    18285 
    18286 > color #1.2/a:2552 pale violet red
    18287 
    18288 > color #1.2/a:2553 khaki
    18289 
    18290 > color #1.2/a:2554 green yellow
    18291 
    18292 > color #1.2/a:2555 aquamarine
    18293 
    18294 > color #1.2/a:2556 steel blue
    18295 
    18296 > color #1.2/Y orchid
    18297 
    18298 > color #1.2/a:2582 medium purple
    18299 
    18300 > color #1.2/a:2583 royal blue
    18301 
    18302 > color to_show&@O* red
    18303 
    18304 > color to_show&@N* blue
    18305 
    18306 > color to_show&@P orange
    18307 
    18308 > name to_cartoon #1.2/a:2549-2559
    18309 
    18310 > name to_hbond #1.2/a:1955,2550-2558,2581-2584
    18311 
    18312 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    18313 
    18314 > cartoon to_cartoon
    18315 
    18316 > show to_show
    18317 
    18318 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    18319 
    18320 > hbonds to_hbond restrict to_show color yellow
    18321 
    18322 19 hydrogen bonds found 
    18323 
    18324 > show #!1.2 models
    18325 
    18326 > delete #999
    18327 
    18328 > windowsize 600 600
    18329 
    18330 > lighting simple
    18331 
    18332 > graphics silhouettes true
    18333 
    18334 > hide #1.2
    18335 
    18336 > ~cartoon #1.2
    18337 
    18338 > color #1.2 white
    18339 
    18340 > delete #999
    18341 
    18342 > combine #1.2 modelId 999 name cartoon
    18343 
    18344 > color #1.2/a:2552 pale violet red
    18345 
    18346 > color #1.2/a:2553 khaki
    18347 
    18348 > color #1.2/a:2554 green yellow
    18349 
    18350 > color #1.2/a:2555 aquamarine
    18351 
    18352 > color #1.2/a:2556 steel blue
    18353 
    18354 > color #1.2/Y orchid
    18355 
    18356 > color #1.2/a:2582 medium purple
    18357 
    18358 > color #1.2/a:2583 royal blue
    18359 
    18360 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    18361 
    18362 > color to_show&@O* red
    18363 
    18364 > color to_show&@N* blue
    18365 
    18366 > color to_show&@P orange
    18367 
    18368 > name to_cartoon #999/a:2549-2559
    18369 
    18370 > name to_hbond #1.2/a:1955,2550-2558,2581-2584
    18371 
    18372 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    18373 
    18374 > cartoon to_cartoon
    18375 
    18376 > show to_show
    18377 
    18378 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    18379 
    18380 > hbonds to_hbond restrict to_show color yellow
    18381 
    18382 19 hydrogen bonds found 
    18383 
    18384 > windowsize 600 600
    18385 
    18386 > lighting simple
    18387 
    18388 > graphics silhouettes true
    18389 
    18390 > hide #1.2
    18391 
    18392 > ~cartoon #1.2
    18393 
    18394 > color #1.2 white
    18395 
    18396 > delete #999
    18397 
    18398 > combine #1.2 modelId 999 name cartoon
    18399 
    18400 > color #1.2/a:2552 pale violet red
    18401 
    18402 > color #1.2/a:2553 khaki
    18403 
    18404 > color #1.2/a:2554 green yellow
    18405 
    18406 > color #1.2/a:2555 aquamarine
    18407 
    18408 > color #1.2/a:2556 steel blue
    18409 
    18410 > color #1.2/Y orchid
    18411 
    18412 > color #1.2/a:2582 medium purple
    18413 
    18414 > color #1.2/a:2583 royal blue
    18415 
    18416 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    18417 
    18418 > color to_show&@O* red
    18419 
    18420 > color to_show&@N* blue
    18421 
    18422 > color to_show&@P orange
    18423 
    18424 > name to_cartoon #999/a:2549-2559
    18425 
    18426 > name to_hbond #1.2/a:1955,2550-2558,2581-2584
    18427 
    18428 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    18429 
    18430 > cartoon to_cartoon
    18431 
    18432 > show to_show
    18433 
    18434 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    18435 
    18436 > hbonds to_hbond restrict to_show color yellow
    18437 
    18438 19 hydrogen bonds found 
    18439 
    18440 > hide #!1.2 models
    18441 
    18442 > hide #!999 models
    18443 
    18444 > show #!6.10 models
    18445 
    18446 > hide 6.10
    18447 
    18448 Expected a collection of one of 'atoms', 'bonds', 'cartoons', 'models',
    18449 'pbonds', 'pseudobonds', 'ribbons', or 'surfaces' or a keyword 
    18450 
    18451 > ~cartoon 6.10
    18452 
    18453 > cartoon hide 6.10
    18454 
    18455 Expected an atoms specifier or a keyword 
    18456 
    18457 > color 6.10 white
    18458 
    18459 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18460 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18461 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18462 
    18463 > delete #999
    18464 
    18465 > combine 6.10 modelId 999 name cartoon
    18466 
    18467 Expected a keyword 
    18468 
    18469 > color 6.10/a:2552 pale violet red
    18470 
    18471 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18472 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18473 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18474 
    18475 > color 6.10/a:2553 khaki
    18476 
    18477 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18478 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18479 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18480 
    18481 > color 6.10/a:2554 green yellow
    18482 
    18483 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18484 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18485 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18486 
    18487 > color 6.10/a:2555 aquamarine
    18488 
    18489 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18490 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18491 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18492 
    18493 > color 6.10/a:2556 steel blue
    18494 
    18495 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18496 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18497 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18498 
    18499 > color 6.10/Y orchid
    18500 
    18501 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18502 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18503 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18504 
    18505 > color 6.10/a:2582 medium purple
    18506 
    18507 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18508 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18509 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18510 
    18511 > color 6.10/a:2583 royal blue
    18512 
    18513 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    18514 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    18515 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    18516 
    18517 > color to_show&@O* red
    18518 
    18519 > color to_show&@N* blue
    18520 
    18521 > color to_show&@P orange
    18522 
    18523 > name to_cartoon #999/a:2549-2559
    18524 
    18525 > name to_hbond 6.10/a:1955,2550-2558,2581-2584
    18526 
    18527 "6.10/a:1955,2550-2558,2581-2584": invalid atom specifier 
    18528 
    18529 > name to_show 6.10/a:1955,2549-2559,2581-2584/Y:73-76
    18530 
    18531 "6.10/a:1955,2549-2559,2581-2584/Y:73-76": invalid atom specifier 
    18532 
    18533 > cartoon to_cartoon
    18534 
    18535 > show to_show
    18536 
    18537 > hide 6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    18538 
    18539 Expected a collection of one of 'atoms', 'bonds', 'cartoons', 'models',
    18540 'pbonds', 'pseudobonds', 'ribbons', or 'surfaces' or a keyword 
    18541 
    18542 > hbonds to_hbond restrict to_show color yellow
    18543 
    18544 19 hydrogen bonds found 
    18545 
    18546 > hide #!6.10 models
    18547 
    18548 > show #!6.10 models
    18549 
    18550 > hide #6.10
    18551 
    18552 > ~cartoon #6.10
    18553 
    18554 > color #6.10 white
    18555 
    18556 > delete #999
    18557 
    18558 > combine #6.10 modelId 999 name cartoon
    18559 
    18560 > color #6.10/a:2552 pale violet red
    18561 
    18562 > color #6.10/a:2553 khaki
    18563 
    18564 > color #6.10/a:2554 green yellow
    18565 
    18566 > color #6.10/a:2555 aquamarine
    18567 
    18568 > color #6.10/a:2556 steel blue
    18569 
    18570 > color #6.10/Y orchid
    18571 
    18572 > color #6.10/a:2582 medium purple
    18573 
    18574 > color #6.10/a:2583 royal blue
    18575 
    18576 > color to_show&@O* red
    18577 
    18578 > color to_show&@N* blue
    18579 
    18580 > color to_show&@P orange
    18581 
    18582 > name to_cartoon #999/a:2549-2559
    18583 
    18584 > name to_hbond #6.10/a:1955,2550-2558,2581-2584
    18585 
    18586 > name to_show #6.10/a:1955,2549-2559,2581-2584/Y:73-76
    18587 
    18588 > cartoon to_cartoon
    18589 
    18590 > show to_show
    18591 
    18592 > hide #6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    18593 
    18594 > hbonds to_hbond restrict to_show color yellow
    18595 
    18596 12 hydrogen bonds found 
    18597 
    18598 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J83_cl0.png height 600 width
    18599 > 600 supersample 3
    18600 
    18601 > hide #!6.10 models
    18602 
    18603 > show #!6.10 models
    18604 
    18605 > hide #!6.10 models
    18606 
    18607 > hide #!999 models
    18608 
    18609 > show #!6.10 models
    18610 
    18611 > hide #6.10
    18612 
    18613 > ~cartoon #6.10
    18614 
    18615 > color #6.10 white
    18616 
    18617 > delete #999
    18618 
    18619 > combine #6.10 modelId 999 name cartoon
    18620 
    18621 > color #6.10/a:2552 pale violet red
    18622 
    18623 > color #6.10/a:2553 khaki
    18624 
    18625 > color #6.10/a:2554 green yellow
    18626 
    18627 > color #6.10/a:2555 aquamarine
    18628 
    18629 > color #6.10/a:2556 steel blue
    18630 
    18631 > color #6.10/Y orchid
    18632 
    18633 > color #6.10/a:2582 medium purple
    18634 
    18635 > color #6.10/a:2583 royal blue
    18636 
    18637 > color to_show&@O* red
    18638 
    18639 > color to_show&@N* blue
    18640 
    18641 > color to_show&@P orange
    18642 
    18643 > name to_cartoon #999/a:2549-2559
    18644 
    18645 > name to_hbond #6.10/a:1955,2549-2559,2581-2584
    18646 
    18647 > name to_show #6.10/a:1955,2549-2559,2581-2584/Y:73-76
    18648 
    18649 > cartoon to_cartoon
    18650 
    18651 > show to_show
    18652 
    18653 > hide #6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    18654 
    18655 > hbonds to_hbond restrict to_show color yellow
    18656 
    18657 16 hydrogen bonds found 
    18658 
    18659 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J83_cl0.png height 600 width
    18660 > 600 supersample 3
    18661 
    18662 > hide #!6.10 models
    18663 
    18664 > delete #999
    18665 
    18666 > show #!6.1 models
    18667 
    18668 > hide #6.1
    18669 
    18670 > ~cartoon #6.1
    18671 
    18672 > color #6.1 white
    18673 
    18674 > delete #999
    18675 
    18676 > combine #6.1 modelId 999 name cartoon
    18677 
    18678 > color #6.1/a:2552 pale violet red
    18679 
    18680 > color #6.1/a:2553 khaki
    18681 
    18682 > color #6.1/a:2554 green yellow
    18683 
    18684 > color #6.1/a:2555 aquamarine
    18685 
    18686 > color #6.1/a:2556 steel blue
    18687 
    18688 > color #6.1/Y orchid
    18689 
    18690 > color #6.1/a:2582 medium purple
    18691 
    18692 > color #6.1/a:2583 royal blue
    18693 
    18694 > color to_show&@O* red
    18695 
    18696 > color to_show&@N* blue
    18697 
    18698 > color to_show&@P orange
    18699 
    18700 > name to_cartoon #999/a:2549-2559
    18701 
    18702 > name to_hbond #6.1/a:1955,2549-2559,2581-2584
    18703 
    18704 > name to_show #6.1/a:1955,2549-2559,2581-2584/Y:73-76
    18705 
    18706 > cartoon to_cartoon
    18707 
    18708 > show to_show
    18709 
    18710 > hide #6.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    18711 
    18712 > hbonds to_hbond restrict to_show color yellow
    18713 
    18714 16 hydrogen bonds found 
    18715 
    18716 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J84_cl1.png height 600 width
    18717 > 600 supersample 3
    18718 
    18719 > hide #!6.1 models
    18720 
    18721 > delete #999
    18722 
    18723 > volume style mesh
    18724 
    18725 > nucleotides atoms
    18726 
    18727 > windowsize 600 600
    18728 
    18729 > lighting simple
    18730 
    18731 > graphics silhouettes true
    18732 
    18733 > view A_loop
    18734 
    18735 > show #!6.10 models
    18736 
    18737 > hide #6.10
    18738 
    18739 > ~cartoon #6.10
    18740 
    18741 > color #6.10 white
    18742 
    18743 > delete #999
    18744 
    18745 > combine #6.10 modelId 999 name cartoon
    18746 
    18747 > color #6.10/a:2552 pale violet red
    18748 
    18749 > color #6.10/a:2553 khaki
    18750 
    18751 > color #6.10/a:2554 green yellow
    18752 
    18753 > color #6.10/a:2555 aquamarine
    18754 
    18755 > color #6.10/a:2556 steel blue
    18756 
    18757 > color #6.10/Y orchid
    18758 
    18759 > color #6.10/a:2582 medium purple
    18760 
    18761 > color #6.10/a:2583 royal blue
    18762 
    18763 > color to_show&@O* red
    18764 
    18765 > color to_show&@N* blue
    18766 
    18767 > color to_show&@P orange
    18768 
    18769 > name to_cartoon #999/a:2549-2559
    18770 
    18771 > name to_hbond #6.10/a:1955,2549-2559,2581-2584
    18772 
    18773 > name to_show #6.10/a:1955,2549-2559,2581-2584/Y:73-76
    18774 
    18775 > cartoon to_cartoon
    18776 
    18777 > show to_show
    18778 
    18779 > hide #6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    18780 
    18781 > hbonds to_hbond restrict to_show color yellow
    18782 
    18783 16 hydrogen bonds found 
    18784 
    18785 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J83_cl0.png height 600 width
    18786 > 600 supersample 3
    18787 
    18788 > hide #!6.10 models
    18789 
    18790 > delete #999
    18791 
    18792 > show #!6.1 models
    18793 
    18794 > hide #6.1
    18795 
    18796 > ~cartoon #6.1
    18797 
    18798 > color #6.1 white
    18799 
    18800 > delete #999
    18801 
    18802 > combine #6.1 modelId 999 name cartoon
    18803 
    18804 > color #6.1/a:2552 pale violet red
    18805 
    18806 > color #6.1/a:2553 khaki
    18807 
    18808 > color #6.1/a:2554 green yellow
    18809 
    18810 > color #6.1/a:2555 aquamarine
    18811 
    18812 > color #6.1/a:2556 steel blue
    18813 
    18814 > color #6.1/Y orchid
    18815 
    18816 > color #6.1/a:2582 medium purple
    18817 
    18818 > color #6.1/a:2583 royal blue
    18819 
    18820 > color to_show&@O* red
    18821 
    18822 > color to_show&@N* blue
    18823 
    18824 > color to_show&@P orange
    18825 
    18826 > name to_cartoon #999/a:2549-2559
    18827 
    18828 > name to_hbond #6.1/a:1955,2549-2559,2581-2584
    18829 
    18830 > name to_show #6.1/a:1955,2549-2559,2581-2584/Y:73-76
    18831 
    18832 > cartoon to_cartoon
    18833 
    18834 > show to_show
    18835 
    18836 > hide #6.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    18837 
    18838 > hbonds to_hbond restrict to_show color yellow
    18839 
    18840 16 hydrogen bonds found 
    18841 
    18842 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J84_cl1.png height 600 width
    18843 > 600 supersample 3
    18844 
    18845 > hide #!6.1 models
    18846 
    18847 > delete #999
    18848 
    18849 > hide #1.2
    18850 
    18851 > ~cartoon #1.2
    18852 
    18853 > color #1.2 white
    18854 
    18855 > delete #999
    18856 
    18857 > combine #1.2 modelId 999 name cartoon
    18858 
    18859 > color #1.2/a:2552 pale violet red
    18860 
    18861 > color #1.2/a:2553 khaki
    18862 
    18863 > color #1.2/a:2554 green yellow
    18864 
    18865 > color #1.2/a:2555 aquamarine
    18866 
    18867 > color #1.2/a:2556 steel blue
    18868 
    18869 > color #1.2/Y orchid
    18870 
    18871 > color #1.2/a:2582 medium purple
    18872 
    18873 > color #1.2/a:2583 royal blue
    18874 
    18875 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    18876 
    18877 > color to_show&@O* red
    18878 
    18879 > color to_show&@N* blue
    18880 
    18881 > color to_show&@P orange
    18882 
    18883 > name to_cartoon #999/a:2549-2559
    18884 
    18885 > name to_hbond #1.2/a:1955,2549-2559,2581-2584
    18886 
    18887 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    18888 
    18889 > cartoon to_cartoon
    18890 
    18891 > show to_show
    18892 
    18893 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    18894 
    18895 > hbonds to_hbond restrict to_show color yellow
    18896 
    18897 23 hydrogen bonds found 
    18898 
    18899 > view A_loop
    18900 
    18901 > show #!1.2 models
    18902 
    18903 > hide #!1.2 models
    18904 
    18905 > hide #!999 models
    18906 
    18907 > volume style mesh
    18908 
    18909 > nucleotides atoms
    18910 
    18911 > windowsize 600 600
    18912 
    18913 > lighting simple
    18914 
    18915 > graphics silhouettes true
    18916 
    18917 > graphics quality 6
    18918 
    18919 > show #!1.2 models
    18920 
    18921 > hide #1.2
    18922 
    18923 > ~cartoon #1.2
    18924 
    18925 > color #1.2 white
    18926 
    18927 > delete #999
    18928 
    18929 > combine #1.2 modelId 999 name cartoon
    18930 
    18931 > color #1.2/a:2552 pale violet red
    18932 
    18933 > color #1.2/a:2553 khaki
    18934 
    18935 > color #1.2/a:2554 green yellow
    18936 
    18937 > color #1.2/a:2555 aquamarine
    18938 
    18939 > color #1.2/a:2556 steel blue
    18940 
    18941 > color #1.2/Y orchid
    18942 
    18943 > color #1.2/a:2582 medium purple
    18944 
    18945 > color #1.2/a:2583 royal blue
    18946 
    18947 > color to_show&@O* red
    18948 
    18949 > color to_show&@N* blue
    18950 
    18951 > color to_show&@P orange
    18952 
    18953 > name to_cartoon #999/a:2549-2559
    18954 
    18955 > name to_hbond #1.2/a:1955,2549-2559,2581-2584
    18956 
    18957 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    18958 
    18959 > cartoon to_cartoon
    18960 
    18961 > show to_show
    18962 
    18963 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    18964 
    18965 > hbonds to_hbond restrict to_show color yellow
    18966 
    18967 23 hydrogen bonds found 
    18968 
    18969 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    18970 > supersample 3
    18971 
    18972 > hide #!1.2 models
    18973 
    18974 > delete #999
    18975 
    18976 > show #!1.5 models
    18977 
    18978 > hide #1.5
    18979 
    18980 > ~cartoon #1.5
    18981 
    18982 > color #1.5 white
    18983 
    18984 > delete #999
    18985 
    18986 > combine #1.5 modelId 999 name cartoon
    18987 
    18988 > color #1.5/a:2552 pale violet red
    18989 
    18990 > color #1.5/a:2553 khaki
    18991 
    18992 > color #1.5/a:2554 green yellow
    18993 
    18994 > color #1.5/a:2555 aquamarine
    18995 
    18996 > color #1.5/a:2556 steel blue
    18997 
    18998 > color #1.5/Y orchid
    18999 
    19000 > color #1.5/a:2582 medium purple
    19001 
    19002 > color #1.5/a:2583 royal blue
    19003 
    19004 > color to_show&@O* red
    19005 
    19006 > color to_show&@N* blue
    19007 
    19008 > color to_show&@P orange
    19009 
    19010 > name to_cartoon #999/a:2549-2559
    19011 
    19012 > name to_hbond #1.5/a:1955,2549-2559,2581-2584
    19013 
    19014 > name to_show #1.5/a:1955,2549-2559,2581-2584/Y:73-76
    19015 
    19016 > cartoon to_cartoon
    19017 
    19018 > show to_show
    19019 
    19020 > hide #1.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19021 
    19022 > hbonds to_hbond restrict to_show color yellow
    19023 
    19024 1 hydrogen bonds found 
    19025 
    19026 > save /Users/dalar193/Desktop/A_loop/A_loop_8b0x.png height 600 width 600
    19027 > supersample 3
    19028 
    19029 > hide #!1.5 models
    19030 
    19031 > delete #999
    19032 
    19033 > show #!1.7 models
    19034 
    19035 > hide #1.7
    19036 
    19037 > ~cartoon #1.7
    19038 
    19039 > color #1.7 white
    19040 
    19041 > delete #999
    19042 
    19043 > combine #1.7 modelId 999 name cartoon
    19044 
    19045 > color #1.7/a:2552 pale violet red
    19046 
    19047 > color #1.7/a:2553 khaki
    19048 
    19049 > color #1.7/a:2554 green yellow
    19050 
    19051 > color #1.7/a:2555 aquamarine
    19052 
    19053 > color #1.7/a:2556 steel blue
    19054 
    19055 > color #1.7/Y orchid
    19056 
    19057 > color #1.7/a:2582 medium purple
    19058 
    19059 > color #1.7/a:2583 royal blue
    19060 
    19061 > color to_show&@O* red
    19062 
    19063 > color to_show&@N* blue
    19064 
    19065 > color to_show&@P orange
    19066 
    19067 > name to_cartoon #999/a:2549-2559
    19068 
    19069 > name to_hbond #1.7/a:1955,2549-2559,2581-2584
    19070 
    19071 > name to_show #1.7/a:1955,2549-2559,2581-2584/Y:73-76
    19072 
    19073 > cartoon to_cartoon
    19074 
    19075 > show to_show
    19076 
    19077 > hide #1.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19078 
    19079 > hbonds to_hbond restrict to_show color yellow
    19080 
    19081 16 hydrogen bonds found 
    19082 
    19083 > save /Users/dalar193/Desktop/A_loop/A_loop_8cgk.png height 600 width 600
    19084 > supersample 3
    19085 
    19086 > hide #!1.7 models
    19087 
    19088 > delete #999
    19089 
    19090 > show #!1.9 models
    19091 
    19092 > hide #1.9
    19093 
    19094 > ~cartoon #1.9
    19095 
    19096 > color #1.9 white
    19097 
    19098 > delete #999
    19099 
    19100 > combine #1.9 modelId 999 name cartoon
    19101 
    19102 > color #1.9/a:2552 pale violet red
    19103 
    19104 > color #1.9/a:2553 khaki
    19105 
    19106 > color #1.9/a:2554 green yellow
    19107 
    19108 > color #1.9/a:2555 aquamarine
    19109 
    19110 > color #1.9/a:2556 steel blue
    19111 
    19112 > color #1.9/Y orchid
    19113 
    19114 > color #1.9/a:2582 medium purple
    19115 
    19116 > color #1.9/a:2583 royal blue
    19117 
    19118 > color to_show&@O* red
    19119 
    19120 > color to_show&@N* blue
    19121 
    19122 > color to_show&@P orange
    19123 
    19124 > name to_cartoon #999/a:2549-2559
    19125 
    19126 > name to_hbond #1.9/a:1955,2549-2559,2581-2584
    19127 
    19128 > name to_show #1.9/a:1955,2549-2559,2581-2584/Y:73-76
    19129 
    19130 > cartoon to_cartoon
    19131 
    19132 > show to_show
    19133 
    19134 > hide #1.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19135 
    19136 > hbonds to_hbond restrict to_show color yellow
    19137 
    19138 Atom specifier selects no atoms 
    19139 
    19140 > save /Users/dalar193/Desktop/A_loop/A_loop_7bv8.png height 600 width 600
    19141 > supersample 3
    19142 
    19143 > hide #!1.9 models
    19144 
    19145 > delete #999
    19146 
    19147 > show #!1.11 models
    19148 
    19149 > hide #1.11
    19150 
    19151 > ~cartoon #1.11
    19152 
    19153 > color #1.11 white
    19154 
    19155 > delete #999
    19156 
    19157 > combine #1.11 modelId 999 name cartoon
    19158 
    19159 > color #1.11/a:2552 pale violet red
    19160 
    19161 > color #1.11/a:2553 khaki
    19162 
    19163 > color #1.11/a:2554 green yellow
    19164 
    19165 > color #1.11/a:2555 aquamarine
    19166 
    19167 > color #1.11/a:2556 steel blue
    19168 
    19169 > color #1.11/Y orchid
    19170 
    19171 > color #1.11/a:2582 medium purple
    19172 
    19173 > color #1.11/a:2583 royal blue
    19174 
    19175 > color to_show&@O* red
    19176 
    19177 > color to_show&@N* blue
    19178 
    19179 > color to_show&@P orange
    19180 
    19181 > name to_cartoon #999/a:2549-2559
    19182 
    19183 > name to_hbond #1.11/a:1955,2549-2559,2581-2584
    19184 
    19185 > name to_show #1.11/a:1955,2549-2559,2581-2584/Y:73-76
    19186 
    19187 > cartoon to_cartoon
    19188 
    19189 > show to_show
    19190 
    19191 > hide #1.11/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19192 
    19193 > hbonds to_hbond restrict to_show color yellow
    19194 
    19195 Atom specifier selects no atoms 
    19196 
    19197 > save /Users/dalar193/Desktop/A_loop/A_loop_7o1a.png height 600 width 600
    19198 > supersample 3
    19199 
    19200 > hide #!1.11 models
    19201 
    19202 > delete #999
    19203 
    19204 > show #!6.10 models
    19205 
    19206 > hide #6.10
    19207 
    19208 > ~cartoon #6.10
    19209 
    19210 > color #6.10 white
    19211 
    19212 > delete #999
    19213 
    19214 > combine #6.10 modelId 999 name cartoon
    19215 
    19216 > color #6.10/a:2552 pale violet red
    19217 
    19218 > color #6.10/a:2553 khaki
    19219 
    19220 > color #6.10/a:2554 green yellow
    19221 
    19222 > color #6.10/a:2555 aquamarine
    19223 
    19224 > color #6.10/a:2556 steel blue
    19225 
    19226 > color #6.10/Y orchid
    19227 
    19228 > color #6.10/a:2582 medium purple
    19229 
    19230 > color #6.10/a:2583 royal blue
    19231 
    19232 > color to_show&@O* red
    19233 
    19234 > color to_show&@N* blue
    19235 
    19236 > color to_show&@P orange
    19237 
    19238 > name to_cartoon #999/a:2549-2559
    19239 
    19240 > name to_hbond #6.10/a:1955,2549-2559,2581-2584
    19241 
    19242 > name to_show #6.10/a:1955,2549-2559,2581-2584/Y:73-76
    19243 
    19244 > cartoon to_cartoon
    19245 
    19246 > show to_show
    19247 
    19248 > hide #6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19249 
    19250 > hbonds to_hbond restrict to_show color yellow
    19251 
    19252 16 hydrogen bonds found 
    19253 
    19254 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J83_cl0.png height 600 width
    19255 > 600 supersample 3
    19256 
    19257 > hide #!6.10 models
    19258 
    19259 > delete #999
    19260 
    19261 > show #!6.1 models
    19262 
    19263 > hide #6.1
    19264 
    19265 > ~cartoon #6.1
    19266 
    19267 > color #6.1 white
    19268 
    19269 > delete #999
    19270 
    19271 > combine #6.1 modelId 999 name cartoon
    19272 
    19273 > color #6.1/a:2552 pale violet red
    19274 
    19275 > color #6.1/a:2553 khaki
    19276 
    19277 > color #6.1/a:2554 green yellow
    19278 
    19279 > color #6.1/a:2555 aquamarine
    19280 
    19281 > color #6.1/a:2556 steel blue
    19282 
    19283 > color #6.1/Y orchid
    19284 
    19285 > color #6.1/a:2582 medium purple
    19286 
    19287 > color #6.1/a:2583 royal blue
    19288 
    19289 > color to_show&@O* red
    19290 
    19291 > color to_show&@N* blue
    19292 
    19293 > color to_show&@P orange
    19294 
    19295 > name to_cartoon #999/a:2549-2559
    19296 
    19297 > name to_hbond #6.1/a:1955,2549-2559,2581-2584
    19298 
    19299 > name to_show #6.1/a:1955,2549-2559,2581-2584/Y:73-76
    19300 
    19301 > cartoon to_cartoon
    19302 
    19303 > show to_show
    19304 
    19305 > hide #6.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19306 
    19307 > hbonds to_hbond restrict to_show color yellow
    19308 
    19309 16 hydrogen bonds found 
    19310 
    19311 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J84_cl1.png height 600 width
    19312 > 600 supersample 3
    19313 
    19314 > hide #!6.1 models
    19315 
    19316 > delete #999
    19317 
    19318 > show #!6.2 models
    19319 
    19320 > hide #6.2
    19321 
    19322 > ~cartoon #6.2
    19323 
    19324 > color #6.2 white
    19325 
    19326 > delete #999
    19327 
    19328 > combine #6.2 modelId 999 name cartoon
    19329 
    19330 > color #6.2/a:2552 pale violet red
    19331 
    19332 > color #6.2/a:2553 khaki
    19333 
    19334 > color #6.2/a:2554 green yellow
    19335 
    19336 > color #6.2/a:2555 aquamarine
    19337 
    19338 > color #6.2/a:2556 steel blue
    19339 
    19340 > color #6.2/Y orchid
    19341 
    19342 > color #6.2/a:2582 medium purple
    19343 
    19344 > color #6.2/a:2583 royal blue
    19345 
    19346 > color to_show&@O* red
    19347 
    19348 > color to_show&@N* blue
    19349 
    19350 > color to_show&@P orange
    19351 
    19352 > name to_cartoon #999/a:2549-2559
    19353 
    19354 > name to_hbond #6.2/a:1955,2549-2559,2581-2584
    19355 
    19356 > name to_show #6.2/a:1955,2549-2559,2581-2584/Y:73-76
    19357 
    19358 > cartoon to_cartoon
    19359 
    19360 > show to_show
    19361 
    19362 > hide #6.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19363 
    19364 > hbonds to_hbond restrict to_show color yellow
    19365 
    19366 22 hydrogen bonds found 
    19367 
    19368 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J85_cl2.png height 600 width
    19369 > 600 supersample 3
    19370 
    19371 > hide #!6.2 models
    19372 
    19373 > delete #999
    19374 
    19375 > show #!6.3 models
    19376 
    19377 > hide #6.3
    19378 
    19379 > ~cartoon #6.3
    19380 
    19381 > color #6.3 white
    19382 
    19383 > delete #999
    19384 
    19385 > combine #6.3 modelId 999 name cartoon
    19386 
    19387 > color #6.3/a:2552 pale violet red
    19388 
    19389 > color #6.3/a:2553 khaki
    19390 
    19391 > color #6.3/a:2554 green yellow
    19392 
    19393 > color #6.3/a:2555 aquamarine
    19394 
    19395 > color #6.3/a:2556 steel blue
    19396 
    19397 > color #6.3/Y orchid
    19398 
    19399 > color #6.3/a:2582 medium purple
    19400 
    19401 > color #6.3/a:2583 royal blue
    19402 
    19403 > color to_show&@O* red
    19404 
    19405 > color to_show&@N* blue
    19406 
    19407 > color to_show&@P orange
    19408 
    19409 > name to_cartoon #999/a:2549-2559
    19410 
    19411 > name to_hbond #6.3/a:1955,2549-2559,2581-2584
    19412 
    19413 > name to_show #6.3/a:1955,2549-2559,2581-2584/Y:73-76
    19414 
    19415 > cartoon to_cartoon
    19416 
    19417 > show to_show
    19418 
    19419 > hide #6.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19420 
    19421 > hbonds to_hbond restrict to_show color yellow
    19422 
    19423 16 hydrogen bonds found 
    19424 
    19425 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J86_cl3.png height 600 width
    19426 > 600 supersample 3
    19427 
    19428 > hide #!6.3 models
    19429 
    19430 > delete #999
    19431 
    19432 > show #!6.4 models
    19433 
    19434 > hide #6.4
    19435 
    19436 > ~cartoon #6.4
    19437 
    19438 > color #6.4 white
    19439 
    19440 > delete #999
    19441 
    19442 > combine #6.4 modelId 999 name cartoon
    19443 
    19444 > color #6.4/a:2552 pale violet red
    19445 
    19446 > color #6.4/a:2553 khaki
    19447 
    19448 > color #6.4/a:2554 green yellow
    19449 
    19450 > color #6.4/a:2555 aquamarine
    19451 
    19452 > color #6.4/a:2556 steel blue
    19453 
    19454 > color #6.4/Y orchid
    19455 
    19456 > color #6.4/a:2582 medium purple
    19457 
    19458 > color #6.4/a:2583 royal blue
    19459 
    19460 > color to_show&@O* red
    19461 
    19462 > color to_show&@N* blue
    19463 
    19464 > color to_show&@P orange
    19465 
    19466 > name to_cartoon #999/a:2549-2559
    19467 
    19468 > name to_hbond #6.4/a:1955,2549-2559,2581-2584
    19469 
    19470 > name to_show #6.4/a:1955,2549-2559,2581-2584/Y:73-76
    19471 
    19472 > cartoon to_cartoon
    19473 
    19474 > show to_show
    19475 
    19476 > hide #6.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19477 
    19478 > hbonds to_hbond restrict to_show color yellow
    19479 
    19480 20 hydrogen bonds found 
    19481 
    19482 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J87_cl4.png height 600 width
    19483 > 600 supersample 3
    19484 
    19485 > hide #!6.4 models
    19486 
    19487 > delete #999
    19488 
    19489 > show #!6.5 models
    19490 
    19491 > hide #6.5
    19492 
    19493 > ~cartoon #6.5
    19494 
    19495 > color #6.5 white
    19496 
    19497 > delete #999
    19498 
    19499 > combine #6.5 modelId 999 name cartoon
    19500 
    19501 > color #6.5/a:2552 pale violet red
    19502 
    19503 > color #6.5/a:2553 khaki
    19504 
    19505 > color #6.5/a:2554 green yellow
    19506 
    19507 > color #6.5/a:2555 aquamarine
    19508 
    19509 > color #6.5/a:2556 steel blue
    19510 
    19511 > color #6.5/Y orchid
    19512 
    19513 > color #6.5/a:2582 medium purple
    19514 
    19515 > color #6.5/a:2583 royal blue
    19516 
    19517 > color to_show&@O* red
    19518 
    19519 > color to_show&@N* blue
    19520 
    19521 > color to_show&@P orange
    19522 
    19523 > name to_cartoon #999/a:2549-2559
    19524 
    19525 > name to_hbond #6.5/a:1955,2549-2559,2581-2584
    19526 
    19527 > name to_show #6.5/a:1955,2549-2559,2581-2584/Y:73-76
    19528 
    19529 > cartoon to_cartoon
    19530 
    19531 > show to_show
    19532 
    19533 > hide #6.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19534 
    19535 > hbonds to_hbond restrict to_show color yellow
    19536 
    19537 16 hydrogen bonds found 
    19538 
    19539 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J88_cl5.png height 600 width
    19540 > 600 supersample 3
    19541 
    19542 > hide #!6.5 models
    19543 
    19544 > delete #999
    19545 
    19546 > show #!6.6 models
    19547 
    19548 > hide #6.6
    19549 
    19550 > ~cartoon #6.6
    19551 
    19552 > color #6.6 white
    19553 
    19554 > delete #999
    19555 
    19556 > combine #6.6 modelId 999 name cartoon
    19557 
    19558 > color #6.6/a:2552 pale violet red
    19559 
    19560 > color #6.6/a:2553 khaki
    19561 
    19562 > color #6.6/a:2554 green yellow
    19563 
    19564 > color #6.6/a:2555 aquamarine
    19565 
    19566 > color #6.6/a:2556 steel blue
    19567 
    19568 > color #6.6/Y orchid
    19569 
    19570 > color #6.6/a:2582 medium purple
    19571 
    19572 > color #6.6/a:2583 royal blue
    19573 
    19574 > color to_show&@O* red
    19575 
    19576 > color to_show&@N* blue
    19577 
    19578 > color to_show&@P orange
    19579 
    19580 > name to_cartoon #999/a:2549-2559
    19581 
    19582 > name to_hbond #6.6/a:1955,2549-2559,2581-2584
    19583 
    19584 > name to_show #6.6/a:1955,2549-2559,2581-2584/Y:73-76
    19585 
    19586 > cartoon to_cartoon
    19587 
    19588 > show to_show
    19589 
    19590 > hide #6.6/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19591 
    19592 > hbonds to_hbond restrict to_show color yellow
    19593 
    19594 19 hydrogen bonds found 
    19595 
    19596 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J89_cl6.png height 600 width
    19597 > 600 supersample 3
    19598 
    19599 > hide #!6.6 models
    19600 
    19601 > delete #999
    19602 
    19603 > show #!6.7 models
    19604 
    19605 > hide #6.7
    19606 
    19607 > ~cartoon #6.7
    19608 
    19609 > color #6.7 white
    19610 
    19611 > delete #999
    19612 
    19613 > combine #6.7 modelId 999 name cartoon
    19614 
    19615 > color #6.7/a:2552 pale violet red
    19616 
    19617 > color #6.7/a:2553 khaki
    19618 
    19619 > color #6.7/a:2554 green yellow
    19620 
    19621 > color #6.7/a:2555 aquamarine
    19622 
    19623 > color #6.7/a:2556 steel blue
    19624 
    19625 > color #6.7/Y orchid
    19626 
    19627 > color #6.7/a:2582 medium purple
    19628 
    19629 > color #6.7/a:2583 royal blue
    19630 
    19631 > color to_show&@O* red
    19632 
    19633 > color to_show&@N* blue
    19634 
    19635 > color to_show&@P orange
    19636 
    19637 > name to_cartoon #999/a:2549-2559
    19638 
    19639 > name to_hbond #6.7/a:1955,2549-2559,2581-2584
    19640 
    19641 > name to_show #6.7/a:1955,2549-2559,2581-2584/Y:73-76
    19642 
    19643 > cartoon to_cartoon
    19644 
    19645 > show to_show
    19646 
    19647 > hide #6.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19648 
    19649 > hbonds to_hbond restrict to_show color yellow
    19650 
    19651 16 hydrogen bonds found 
    19652 
    19653 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J90_cl7.png height 600 width
    19654 > 600 supersample 3
    19655 
    19656 > hide #!6.7 models
    19657 
    19658 > delete #999
    19659 
    19660 > show #!6.8 models
    19661 
    19662 > hide #6.8
    19663 
    19664 > ~cartoon #6.8
    19665 
    19666 > color #6.8 white
    19667 
    19668 > delete #999
    19669 
    19670 > combine #6.8 modelId 999 name cartoon
    19671 
    19672 > color #6.8/a:2552 pale violet red
    19673 
    19674 > color #6.8/a:2553 khaki
    19675 
    19676 > color #6.8/a:2554 green yellow
    19677 
    19678 > color #6.8/a:2555 aquamarine
    19679 
    19680 > color #6.8/a:2556 steel blue
    19681 
    19682 > color #6.8/Y orchid
    19683 
    19684 > color #6.8/a:2582 medium purple
    19685 
    19686 > color #6.8/a:2583 royal blue
    19687 
    19688 > color to_show&@O* red
    19689 
    19690 > color to_show&@N* blue
    19691 
    19692 > color to_show&@P orange
    19693 
    19694 > name to_cartoon #999/a:2549-2559
    19695 
    19696 > name to_hbond #6.8/a:1955,2549-2559,2581-2584
    19697 
    19698 > name to_show #6.8/a:1955,2549-2559,2581-2584/Y:73-76
    19699 
    19700 > cartoon to_cartoon
    19701 
    19702 > show to_show
    19703 
    19704 > hide #6.8/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19705 
    19706 > hbonds to_hbond restrict to_show color yellow
    19707 
    19708 15 hydrogen bonds found 
    19709 
    19710 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J91_cl8.png height 600 width
    19711 > 600 supersample 3
    19712 
    19713 > hide #!6.8 models
    19714 
    19715 > delete #999
    19716 
    19717 > show #!6.9 models
    19718 
    19719 > hide #6.9
    19720 
    19721 > ~cartoon #6.9
    19722 
    19723 > color #6.9 white
    19724 
    19725 > delete #999
    19726 
    19727 > combine #6.9 modelId 999 name cartoon
    19728 
    19729 > color #6.9/a:2552 pale violet red
    19730 
    19731 > color #6.9/a:2553 khaki
    19732 
    19733 > color #6.9/a:2554 green yellow
    19734 
    19735 > color #6.9/a:2555 aquamarine
    19736 
    19737 > color #6.9/a:2556 steel blue
    19738 
    19739 > color #6.9/Y orchid
    19740 
    19741 > color #6.9/a:2582 medium purple
    19742 
    19743 > color #6.9/a:2583 royal blue
    19744 
    19745 > color to_show&@O* red
    19746 
    19747 > color to_show&@N* blue
    19748 
    19749 > color to_show&@P orange
    19750 
    19751 > name to_cartoon #999/a:2549-2559
    19752 
    19753 > name to_hbond #6.9/a:1955,2549-2559,2581-2584
    19754 
    19755 > name to_show #6.9/a:1955,2549-2559,2581-2584/Y:73-76
    19756 
    19757 > cartoon to_cartoon
    19758 
    19759 > show to_show
    19760 
    19761 > hide #6.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19762 
    19763 > hbonds to_hbond restrict to_show color yellow
    19764 
    19765 16 hydrogen bonds found 
    19766 
    19767 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J92_cl9.png height 600 width
    19768 > 600 supersample 3
    19769 
    19770 > hide #!6.9 models
    19771 
    19772 > delete #999
    19773 
    19774 > show #!14.10 models
    19775 
    19776 > hide #14.10
    19777 
    19778 > ~cartoon #14.10
    19779 
    19780 > color #14.10 white
    19781 
    19782 > delete #999
    19783 
    19784 > combine #14.10 modelId 999 name cartoon
    19785 
    19786 > color #14.10/a:2552 pale violet red
    19787 
    19788 > color #14.10/a:2553 khaki
    19789 
    19790 > color #14.10/a:2554 green yellow
    19791 
    19792 > color #14.10/a:2555 aquamarine
    19793 
    19794 > color #14.10/a:2556 steel blue
    19795 
    19796 > color #14.10/Y orchid
    19797 
    19798 > color #14.10/a:2582 medium purple
    19799 
    19800 > color #14.10/a:2583 royal blue
    19801 
    19802 > color to_show&@O* red
    19803 
    19804 > color to_show&@N* blue
    19805 
    19806 > color to_show&@P orange
    19807 
    19808 > name to_cartoon #999/a:2549-2559
    19809 
    19810 > name to_hbond #14.10/a:1955,2549-2559,2581-2584
    19811 
    19812 > name to_show #14.10/a:1955,2549-2559,2581-2584/Y:73-76
    19813 
    19814 > cartoon to_cartoon
    19815 
    19816 > show to_show
    19817 
    19818 > hide #14.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19819 
    19820 > hbonds to_hbond restrict to_show color yellow
    19821 
    19822 17 hydrogen bonds found 
    19823 
    19824 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J53_c0.png height 600 width
    19825 > 600 supersample 3
    19826 
    19827 > hide #!14.10 models
    19828 
    19829 > delete #999
    19830 
    19831 > show #!14.1 models
    19832 
    19833 > hide #14.1
    19834 
    19835 > ~cartoon #14.1
    19836 
    19837 > color #14.1 white
    19838 
    19839 > delete #999
    19840 
    19841 > combine #14.1 modelId 999 name cartoon
    19842 
    19843 > color #14.1/a:2552 pale violet red
    19844 
    19845 > color #14.1/a:2553 khaki
    19846 
    19847 > color #14.1/a:2554 green yellow
    19848 
    19849 > color #14.1/a:2555 aquamarine
    19850 
    19851 > color #14.1/a:2556 steel blue
    19852 
    19853 > color #14.1/Y orchid
    19854 
    19855 > color #14.1/a:2582 medium purple
    19856 
    19857 > color #14.1/a:2583 royal blue
    19858 
    19859 > color to_show&@O* red
    19860 
    19861 > color to_show&@N* blue
    19862 
    19863 > color to_show&@P orange
    19864 
    19865 > name to_cartoon #999/a:2549-2559
    19866 
    19867 > name to_hbond #14.1/a:1955,2549-2559,2581-2584
    19868 
    19869 > name to_show #14.1/a:1955,2549-2559,2581-2584/Y:73-76
    19870 
    19871 > cartoon to_cartoon
    19872 
    19873 > show to_show
    19874 
    19875 > hide #14.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19876 
    19877 > hbonds to_hbond restrict to_show color yellow
    19878 
    19879 18 hydrogen bonds found 
    19880 
    19881 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J54_c1.png height 600 width
    19882 > 600 supersample 3
    19883 
    19884 > hide #!14.1 models
    19885 
    19886 > delete #999
    19887 
    19888 > show #!14.2 models
    19889 
    19890 > hide #14.2
    19891 
    19892 > ~cartoon #14.2
    19893 
    19894 > color #14.2 white
    19895 
    19896 > delete #999
    19897 
    19898 > combine #14.2 modelId 999 name cartoon
    19899 
    19900 > color #14.2/a:2552 pale violet red
    19901 
    19902 > color #14.2/a:2553 khaki
    19903 
    19904 > color #14.2/a:2554 green yellow
    19905 
    19906 > color #14.2/a:2555 aquamarine
    19907 
    19908 > color #14.2/a:2556 steel blue
    19909 
    19910 > color #14.2/Y orchid
    19911 
    19912 > color #14.2/a:2582 medium purple
    19913 
    19914 > color #14.2/a:2583 royal blue
    19915 
    19916 > color to_show&@O* red
    19917 
    19918 > color to_show&@N* blue
    19919 
    19920 > color to_show&@P orange
    19921 
    19922 > name to_cartoon #999/a:2549-2559
    19923 
    19924 > name to_hbond #14.2/a:1955,2549-2559,2581-2584
    19925 
    19926 > name to_show #14.2/a:1955,2549-2559,2581-2584/Y:73-76
    19927 
    19928 > cartoon to_cartoon
    19929 
    19930 > show to_show
    19931 
    19932 > hide #14.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19933 
    19934 > hbonds to_hbond restrict to_show color yellow
    19935 
    19936 18 hydrogen bonds found 
    19937 
    19938 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J55_c2.png height 600 width
    19939 > 600 supersample 3
    19940 
    19941 > hide #!14.2 models
    19942 
    19943 > delete #999
    19944 
    19945 > show #!14.3 models
    19946 
    19947 > hide #14.3
    19948 
    19949 > ~cartoon #14.3
    19950 
    19951 > color #14.3 white
    19952 
    19953 > delete #999
    19954 
    19955 > combine #14.3 modelId 999 name cartoon
    19956 
    19957 > color #14.3/a:2552 pale violet red
    19958 
    19959 > color #14.3/a:2553 khaki
    19960 
    19961 > color #14.3/a:2554 green yellow
    19962 
    19963 > color #14.3/a:2555 aquamarine
    19964 
    19965 > color #14.3/a:2556 steel blue
    19966 
    19967 > color #14.3/Y orchid
    19968 
    19969 > color #14.3/a:2582 medium purple
    19970 
    19971 > color #14.3/a:2583 royal blue
    19972 
    19973 > color to_show&@O* red
    19974 
    19975 > color to_show&@N* blue
    19976 
    19977 > color to_show&@P orange
    19978 
    19979 > name to_cartoon #999/a:2549-2559
    19980 
    19981 > name to_hbond #14.3/a:1955,2549-2559,2581-2584
    19982 
    19983 > name to_show #14.3/a:1955,2549-2559,2581-2584/Y:73-76
    19984 
    19985 > cartoon to_cartoon
    19986 
    19987 > show to_show
    19988 
    19989 > hide #14.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    19990 
    19991 > hbonds to_hbond restrict to_show color yellow
    19992 
    19993 22 hydrogen bonds found 
    19994 
    19995 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J56_c3.png height 600 width
    19996 > 600 supersample 3
    19997 
    19998 > hide #!14.3 models
    19999 
    20000 > delete #999
    20001 
    20002 > show #!14.4 models
    20003 
    20004 > hide #14.4
    20005 
    20006 > ~cartoon #14.4
    20007 
    20008 > color #14.4 white
    20009 
    20010 > delete #999
    20011 
    20012 > combine #14.4 modelId 999 name cartoon
    20013 
    20014 > color #14.4/a:2552 pale violet red
    20015 
    20016 > color #14.4/a:2553 khaki
    20017 
    20018 > color #14.4/a:2554 green yellow
    20019 
    20020 > color #14.4/a:2555 aquamarine
    20021 
    20022 > color #14.4/a:2556 steel blue
    20023 
    20024 > color #14.4/Y orchid
    20025 
    20026 > color #14.4/a:2582 medium purple
    20027 
    20028 > color #14.4/a:2583 royal blue
    20029 
    20030 > color to_show&@O* red
    20031 
    20032 > color to_show&@N* blue
    20033 
    20034 > color to_show&@P orange
    20035 
    20036 > name to_cartoon #999/a:2549-2559
    20037 
    20038 > name to_hbond #14.4/a:1955,2549-2559,2581-2584
    20039 
    20040 > name to_show #14.4/a:1955,2549-2559,2581-2584/Y:73-76
    20041 
    20042 > cartoon to_cartoon
    20043 
    20044 > show to_show
    20045 
    20046 > hide #14.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20047 
    20048 > hbonds to_hbond restrict to_show color yellow
    20049 
    20050 17 hydrogen bonds found 
    20051 
    20052 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J57_c4.png height 600 width
    20053 > 600 supersample 3
    20054 
    20055 > hide #!14.4 models
    20056 
    20057 > delete #999
    20058 
    20059 > show #!14.5 models
    20060 
    20061 > hide #14.5
    20062 
    20063 > ~cartoon #14.5
    20064 
    20065 > color #14.5 white
    20066 
    20067 > delete #999
    20068 
    20069 > combine #14.5 modelId 999 name cartoon
    20070 
    20071 > color #14.5/a:2552 pale violet red
    20072 
    20073 > color #14.5/a:2553 khaki
    20074 
    20075 > color #14.5/a:2554 green yellow
    20076 
    20077 > color #14.5/a:2555 aquamarine
    20078 
    20079 > color #14.5/a:2556 steel blue
    20080 
    20081 > color #14.5/Y orchid
    20082 
    20083 > color #14.5/a:2582 medium purple
    20084 
    20085 > color #14.5/a:2583 royal blue
    20086 
    20087 > color to_show&@O* red
    20088 
    20089 > color to_show&@N* blue
    20090 
    20091 > color to_show&@P orange
    20092 
    20093 > name to_cartoon #999/a:2549-2559
    20094 
    20095 > name to_hbond #14.5/a:1955,2549-2559,2581-2584
    20096 
    20097 > name to_show #14.5/a:1955,2549-2559,2581-2584/Y:73-76
    20098 
    20099 > cartoon to_cartoon
    20100 
    20101 > show to_show
    20102 
    20103 > hide #14.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20104 
    20105 > hbonds to_hbond restrict to_show color yellow
    20106 
    20107 16 hydrogen bonds found 
    20108 
    20109 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J58_c5.png height 600 width
    20110 > 600 supersample 3
    20111 
    20112 > hide #!14.5 models
    20113 
    20114 > delete #999
    20115 
    20116 > show #!14.6 models
    20117 
    20118 > hide #14.6
    20119 
    20120 > ~cartoon #14.6
    20121 
    20122 > color #14.6 white
    20123 
    20124 > delete #999
    20125 
    20126 > combine #14.6 modelId 999 name cartoon
    20127 
    20128 > color #14.6/a:2552 pale violet red
    20129 
    20130 > color #14.6/a:2553 khaki
    20131 
    20132 > color #14.6/a:2554 green yellow
    20133 
    20134 > color #14.6/a:2555 aquamarine
    20135 
    20136 > color #14.6/a:2556 steel blue
    20137 
    20138 > color #14.6/Y orchid
    20139 
    20140 > color #14.6/a:2582 medium purple
    20141 
    20142 > color #14.6/a:2583 royal blue
    20143 
    20144 > color to_show&@O* red
    20145 
    20146 > color to_show&@N* blue
    20147 
    20148 > color to_show&@P orange
    20149 
    20150 > name to_cartoon #999/a:2549-2559
    20151 
    20152 > name to_hbond #14.6/a:1955,2549-2559,2581-2584
    20153 
    20154 > name to_show #14.6/a:1955,2549-2559,2581-2584/Y:73-76
    20155 
    20156 > cartoon to_cartoon
    20157 
    20158 > show to_show
    20159 
    20160 > hide #14.6/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20161 
    20162 > hbonds to_hbond restrict to_show color yellow
    20163 
    20164 20 hydrogen bonds found 
    20165 
    20166 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J59_c6.png height 600 width
    20167 > 600 supersample 3
    20168 
    20169 > hide #!14.6 models
    20170 
    20171 > delete #999
    20172 
    20173 > show #!14.7 models
    20174 
    20175 > hide #14.7
    20176 
    20177 > ~cartoon #14.7
    20178 
    20179 > color #14.7 white
    20180 
    20181 > delete #999
    20182 
    20183 > combine #14.7 modelId 999 name cartoon
    20184 
    20185 > color #14.7/a:2552 pale violet red
    20186 
    20187 > color #14.7/a:2553 khaki
    20188 
    20189 > color #14.7/a:2554 green yellow
    20190 
    20191 > color #14.7/a:2555 aquamarine
    20192 
    20193 > color #14.7/a:2556 steel blue
    20194 
    20195 > color #14.7/Y orchid
    20196 
    20197 > color #14.7/a:2582 medium purple
    20198 
    20199 > color #14.7/a:2583 royal blue
    20200 
    20201 > color to_show&@O* red
    20202 
    20203 > color to_show&@N* blue
    20204 
    20205 > color to_show&@P orange
    20206 
    20207 > name to_cartoon #999/a:2549-2559
    20208 
    20209 > name to_hbond #14.7/a:1955,2549-2559,2581-2584
    20210 
    20211 > name to_show #14.7/a:1955,2549-2559,2581-2584/Y:73-76
    20212 
    20213 > cartoon to_cartoon
    20214 
    20215 > show to_show
    20216 
    20217 > hide #14.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20218 
    20219 > hbonds to_hbond restrict to_show color yellow
    20220 
    20221 22 hydrogen bonds found 
    20222 
    20223 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J60_c7.png height 600 width
    20224 > 600 supersample 3
    20225 
    20226 > hide #!14.7 models
    20227 
    20228 > delete #999
    20229 
    20230 > show #!14.8 models
    20231 
    20232 > hide #14.8
    20233 
    20234 > ~cartoon #14.8
    20235 
    20236 > color #14.8 white
    20237 
    20238 > delete #999
    20239 
    20240 > combine #14.8 modelId 999 name cartoon
    20241 
    20242 > color #14.8/a:2552 pale violet red
    20243 
    20244 > color #14.8/a:2553 khaki
    20245 
    20246 > color #14.8/a:2554 green yellow
    20247 
    20248 > color #14.8/a:2555 aquamarine
    20249 
    20250 > color #14.8/a:2556 steel blue
    20251 
    20252 > color #14.8/Y orchid
    20253 
    20254 > color #14.8/a:2582 medium purple
    20255 
    20256 > color #14.8/a:2583 royal blue
    20257 
    20258 > color to_show&@O* red
    20259 
    20260 > color to_show&@N* blue
    20261 
    20262 > color to_show&@P orange
    20263 
    20264 > name to_cartoon #999/a:2549-2559
    20265 
    20266 > name to_hbond #14.8/a:1955,2549-2559,2581-2584
    20267 
    20268 > name to_show #14.8/a:1955,2549-2559,2581-2584/Y:73-76
    20269 
    20270 > cartoon to_cartoon
    20271 
    20272 > show to_show
    20273 
    20274 > hide #14.8/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20275 
    20276 > hbonds to_hbond restrict to_show color yellow
    20277 
    20278 21 hydrogen bonds found 
    20279 
    20280 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J61_c8.png height 600 width
    20281 > 600 supersample 3
    20282 
    20283 > hide #!14.8 models
    20284 
    20285 > delete #999
    20286 
    20287 > show #!14.9 models
    20288 
    20289 > hide #14.9
    20290 
    20291 > ~cartoon #14.9
    20292 
    20293 > color #14.9 white
    20294 
    20295 > delete #999
    20296 
    20297 > combine #14.9 modelId 999 name cartoon
    20298 
    20299 > color #14.9/a:2552 pale violet red
    20300 
    20301 > color #14.9/a:2553 khaki
    20302 
    20303 > color #14.9/a:2554 green yellow
    20304 
    20305 > color #14.9/a:2555 aquamarine
    20306 
    20307 > color #14.9/a:2556 steel blue
    20308 
    20309 > color #14.9/Y orchid
    20310 
    20311 > color #14.9/a:2582 medium purple
    20312 
    20313 > color #14.9/a:2583 royal blue
    20314 
    20315 > color to_show&@O* red
    20316 
    20317 > color to_show&@N* blue
    20318 
    20319 > color to_show&@P orange
    20320 
    20321 > name to_cartoon #999/a:2549-2559
    20322 
    20323 > name to_hbond #14.9/a:1955,2549-2559,2581-2584
    20324 
    20325 > name to_show #14.9/a:1955,2549-2559,2581-2584/Y:73-76
    20326 
    20327 > cartoon to_cartoon
    20328 
    20329 > show to_show
    20330 
    20331 > hide #14.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20332 
    20333 > hbonds to_hbond restrict to_show color yellow
    20334 
    20335 22 hydrogen bonds found 
    20336 
    20337 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J62_c9.png height 600 width
    20338 > 600 supersample 3
    20339 
    20340 > hide #!14.9 models
    20341 
    20342 > delete #999
    20343 
    20344 > show #!22.1 models
    20345 
    20346 > hide #22.1
    20347 
    20348 > ~cartoon #22.1
    20349 
    20350 > color #22.1 white
    20351 
    20352 > delete #999
    20353 
    20354 > combine #22.1 modelId 999 name cartoon
    20355 
    20356 > color #22.1/a:2552 pale violet red
    20357 
    20358 > color #22.1/a:2553 khaki
    20359 
    20360 > color #22.1/a:2554 green yellow
    20361 
    20362 > color #22.1/a:2555 aquamarine
    20363 
    20364 > color #22.1/a:2556 steel blue
    20365 
    20366 > color #22.1/Y orchid
    20367 
    20368 > color #22.1/a:2582 medium purple
    20369 
    20370 > color #22.1/a:2583 royal blue
    20371 
    20372 > color to_show&@O* red
    20373 
    20374 > color to_show&@N* blue
    20375 
    20376 > color to_show&@P orange
    20377 
    20378 > name to_cartoon #999/a:2549-2559
    20379 
    20380 > name to_hbond #22.1/a:1955,2549-2559,2581-2584
    20381 
    20382 > name to_show #22.1/a:1955,2549-2559,2581-2584/Y:73-76
    20383 
    20384 > cartoon to_cartoon
    20385 
    20386 > show to_show
    20387 
    20388 > hide #22.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20389 
    20390 > hbonds to_hbond restrict to_show color yellow
    20391 
    20392 23 hydrogen bonds found 
    20393 
    20394 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J111_ape.png height 600 width
    20395 > 600 supersample 3
    20396 
    20397 > hide #!22.1 models
    20398 
    20399 > delete #999
    20400 
    20401 > show #!22.2 models
    20402 
    20403 > hide #22.2
    20404 
    20405 > ~cartoon #22.2
    20406 
    20407 > color #22.2 white
    20408 
    20409 > delete #999
    20410 
    20411 > combine #22.2 modelId 999 name cartoon
    20412 
    20413 > color #22.2/a:2552 pale violet red
    20414 
    20415 > color #22.2/a:2553 khaki
    20416 
    20417 > color #22.2/a:2554 green yellow
    20418 
    20419 > color #22.2/a:2555 aquamarine
    20420 
    20421 > color #22.2/a:2556 steel blue
    20422 
    20423 > color #22.2/Y orchid
    20424 
    20425 > color #22.2/a:2582 medium purple
    20426 
    20427 > color #22.2/a:2583 royal blue
    20428 
    20429 > color to_show&@O* red
    20430 
    20431 > color to_show&@N* blue
    20432 
    20433 > color to_show&@P orange
    20434 
    20435 > name to_cartoon #999/a:2549-2559
    20436 
    20437 > name to_hbond #22.2/a:1955,2549-2559,2581-2584
    20438 
    20439 > name to_show #22.2/a:1955,2549-2559,2581-2584/Y:73-76
    20440 
    20441 > cartoon to_cartoon
    20442 
    20443 > show to_show
    20444 
    20445 > hide #22.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20446 
    20447 > hbonds to_hbond restrict to_show color yellow
    20448 
    20449 24 hydrogen bonds found 
    20450 
    20451 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J112_ap.png height 600 width
    20452 > 600 supersample 3
    20453 
    20454 > hide #!22.2 models
    20455 
    20456 > delete #999
    20457 
    20458 > show #!22.3 models
    20459 
    20460 > hide #22.3
    20461 
    20462 > ~cartoon #22.3
    20463 
    20464 > color #22.3 white
    20465 
    20466 > delete #999
    20467 
    20468 > combine #22.3 modelId 999 name cartoon
    20469 
    20470 > color #22.3/a:2552 pale violet red
    20471 
    20472 > color #22.3/a:2553 khaki
    20473 
    20474 > color #22.3/a:2554 green yellow
    20475 
    20476 > color #22.3/a:2555 aquamarine
    20477 
    20478 > color #22.3/a:2556 steel blue
    20479 
    20480 > color #22.3/Y orchid
    20481 
    20482 > color #22.3/a:2582 medium purple
    20483 
    20484 > color #22.3/a:2583 royal blue
    20485 
    20486 > color to_show&@O* red
    20487 
    20488 > color to_show&@N* blue
    20489 
    20490 > color to_show&@P orange
    20491 
    20492 > name to_cartoon #999/a:2549-2559
    20493 
    20494 > name to_hbond #22.3/a:1955,2549-2559,2581-2584
    20495 
    20496 > name to_show #22.3/a:1955,2549-2559,2581-2584/Y:73-76
    20497 
    20498 > cartoon to_cartoon
    20499 
    20500 > show to_show
    20501 
    20502 > hide #22.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20503 
    20504 > hbonds to_hbond restrict to_show color yellow
    20505 
    20506 16 hydrogen bonds found 
    20507 
    20508 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J113_pe.png height 600 width
    20509 > 600 supersample 3
    20510 
    20511 > hide #!22.3 models
    20512 
    20513 > delete #999
    20514 
    20515 > show #!22.4 models
    20516 
    20517 > hide #22.4
    20518 
    20519 > ~cartoon #22.4
    20520 
    20521 > color #22.4 white
    20522 
    20523 > delete #999
    20524 
    20525 > combine #22.4 modelId 999 name cartoon
    20526 
    20527 > color #22.4/a:2552 pale violet red
    20528 
    20529 > color #22.4/a:2553 khaki
    20530 
    20531 > color #22.4/a:2554 green yellow
    20532 
    20533 > color #22.4/a:2555 aquamarine
    20534 
    20535 > color #22.4/a:2556 steel blue
    20536 
    20537 > color #22.4/Y orchid
    20538 
    20539 > color #22.4/a:2582 medium purple
    20540 
    20541 > color #22.4/a:2583 royal blue
    20542 
    20543 > color to_show&@O* red
    20544 
    20545 > color to_show&@N* blue
    20546 
    20547 > color to_show&@P orange
    20548 
    20549 > name to_cartoon #999/a:2549-2559
    20550 
    20551 > name to_hbond #22.4/a:1955,2549-2559,2581-2584
    20552 
    20553 > name to_show #22.4/a:1955,2549-2559,2581-2584/Y:73-76
    20554 
    20555 > cartoon to_cartoon
    20556 
    20557 > show to_show
    20558 
    20559 > hide #22.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20560 
    20561 > hbonds to_hbond restrict to_show color yellow
    20562 
    20563 18 hydrogen bonds found 
    20564 
    20565 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J124_e.png height 600 width
    20566 > 600 supersample 3
    20567 
    20568 > hide #!22.4 models
    20569 
    20570 > delete #999
    20571 
    20572 > graphics quality 1
    20573 
    20574 > dalar193@UU-GWCLF004GH:~/tmp ./render_models.py
    20575 
    20576 Unknown command: dalar193@UU-GWCLF004GH:~/tmp ./render_models.py 
    20577 
    20578 > graphics quality 6
    20579 
    20580 > show #!1.2 models
    20581 
    20582 > hide #1.2
    20583 
    20584 > ~cartoon #1.2
    20585 
    20586 > color #1.2 white
    20587 
    20588 > delete #999
    20589 
    20590 > combine #1.2 modelId 999 name cartoon
    20591 
    20592 > color #1.2/a:2552 pale violet red
    20593 
    20594 > color #1.2/a:2553 khaki
    20595 
    20596 > color #1.2/a:2554 green yellow
    20597 
    20598 > color #1.2/a:2555 aquamarine
    20599 
    20600 > color #1.2/a:2556 steel blue
    20601 
    20602 > color #1.2/Y orchid
    20603 
    20604 > color #1.2/a:2582 medium purple
    20605 
    20606 > color #1.2/a:2583 royal blue
    20607 
    20608 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    20609 
    20610 > color to_show&@O* red
    20611 
    20612 > color to_show&@N* blue
    20613 
    20614 > color to_show&@P orange
    20615 
    20616 > name to_cartoon #999/a:2549-2559
    20617 
    20618 > name to_hbond #1.2/a:1955,2549-2559,2581-2584
    20619 
    20620 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    20621 
    20622 > cartoon to_cartoon
    20623 
    20624 > show to_show
    20625 
    20626 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20627 
    20628 > hbonds to_hbond restrict to_show color yellow
    20629 
    20630 23 hydrogen bonds found 
    20631 
    20632 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    20633 > supersample 3
    20634 
    20635 > hide #!1.2 models
    20636 
    20637 > delete #999
    20638 
    20639 > show #!1.5 models
    20640 
    20641 > hide #1.5
    20642 
    20643 > ~cartoon #1.5
    20644 
    20645 > color #1.5 white
    20646 
    20647 > delete #999
    20648 
    20649 > combine #1.5 modelId 999 name cartoon
    20650 
    20651 > color #1.5/a:2552 pale violet red
    20652 
    20653 > color #1.5/a:2553 khaki
    20654 
    20655 > color #1.5/a:2554 green yellow
    20656 
    20657 > color #1.5/a:2555 aquamarine
    20658 
    20659 > color #1.5/a:2556 steel blue
    20660 
    20661 > color #1.5/Y orchid
    20662 
    20663 > color #1.5/a:2582 medium purple
    20664 
    20665 > color #1.5/a:2583 royal blue
    20666 
    20667 > color #1.5/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    20668 
    20669 > color to_show&@O* red
    20670 
    20671 > color to_show&@N* blue
    20672 
    20673 > color to_show&@P orange
    20674 
    20675 > name to_cartoon #999/a:2549-2559
    20676 
    20677 > name to_hbond #1.5/a:1955,2549-2559,2581-2584
    20678 
    20679 > name to_show #1.5/a:1955,2549-2559,2581-2584/Y:73-76
    20680 
    20681 > cartoon to_cartoon
    20682 
    20683 > show to_show
    20684 
    20685 > hide #1.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20686 
    20687 > hbonds to_hbond restrict to_show color yellow
    20688 
    20689 1 hydrogen bonds found 
    20690 
    20691 > save /Users/dalar193/Desktop/A_loop/A_loop_8b0x.png height 600 width 600
    20692 > supersample 3
    20693 
    20694 > hide #!1.5 models
    20695 
    20696 > delete #999
    20697 
    20698 > show #!1.7 models
    20699 
    20700 > hide #1.7
    20701 
    20702 > ~cartoon #1.7
    20703 
    20704 > color #1.7 white
    20705 
    20706 > delete #999
    20707 
    20708 > combine #1.7 modelId 999 name cartoon
    20709 
    20710 > color #1.7/a:2552 pale violet red
    20711 
    20712 > color #1.7/a:2553 khaki
    20713 
    20714 > color #1.7/a:2554 green yellow
    20715 
    20716 > color #1.7/a:2555 aquamarine
    20717 
    20718 > color #1.7/a:2556 steel blue
    20719 
    20720 > color #1.7/Y orchid
    20721 
    20722 > color #1.7/a:2582 medium purple
    20723 
    20724 > color #1.7/a:2583 royal blue
    20725 
    20726 > color #1.7/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    20727 
    20728 > color to_show&@O* red
    20729 
    20730 > color to_show&@N* blue
    20731 
    20732 > color to_show&@P orange
    20733 
    20734 > name to_cartoon #999/a:2549-2559
    20735 
    20736 > name to_hbond #1.7/a:1955,2549-2559,2581-2584
    20737 
    20738 > name to_show #1.7/a:1955,2549-2559,2581-2584/Y:73-76
    20739 
    20740 > cartoon to_cartoon
    20741 
    20742 > show to_show
    20743 
    20744 > hide #1.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20745 
    20746 > hbonds to_hbond restrict to_show color yellow
    20747 
    20748 16 hydrogen bonds found 
    20749 
    20750 > save /Users/dalar193/Desktop/A_loop/A_loop_8cgk.png height 600 width 600
    20751 > supersample 3
    20752 
    20753 > hide #!1.7 models
    20754 
    20755 > delete #999
    20756 
    20757 > show #!1.9 models
    20758 
    20759 > hide #1.9
    20760 
    20761 > ~cartoon #1.9
    20762 
    20763 > color #1.9 white
    20764 
    20765 > delete #999
    20766 
    20767 > combine #1.9 modelId 999 name cartoon
    20768 
    20769 > color #1.9/a:2552 pale violet red
    20770 
    20771 > color #1.9/a:2553 khaki
    20772 
    20773 > color #1.9/a:2554 green yellow
    20774 
    20775 > color #1.9/a:2555 aquamarine
    20776 
    20777 > color #1.9/a:2556 steel blue
    20778 
    20779 > color #1.9/Y orchid
    20780 
    20781 > color #1.9/a:2582 medium purple
    20782 
    20783 > color #1.9/a:2583 royal blue
    20784 
    20785 > color #1.9/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    20786 
    20787 > color to_show&@O* red
    20788 
    20789 > color to_show&@N* blue
    20790 
    20791 > color to_show&@P orange
    20792 
    20793 > name to_cartoon #999/a:2549-2559
    20794 
    20795 > name to_hbond #1.9/a:1955,2549-2559,2581-2584
    20796 
    20797 > name to_show #1.9/a:1955,2549-2559,2581-2584/Y:73-76
    20798 
    20799 > cartoon to_cartoon
    20800 
    20801 > show to_show
    20802 
    20803 > hide #1.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20804 
    20805 > hbonds to_hbond restrict to_show color yellow
    20806 
    20807 Atom specifier selects no atoms 
    20808 
    20809 > save /Users/dalar193/Desktop/A_loop/A_loop_7bv8.png height 600 width 600
    20810 > supersample 3
    20811 
    20812 > hide #!1.9 models
    20813 
    20814 > delete #999
    20815 
    20816 > show #!1.11 models
    20817 
    20818 > hide #1.11
    20819 
    20820 > ~cartoon #1.11
    20821 
    20822 > color #1.11 white
    20823 
    20824 > delete #999
    20825 
    20826 > combine #1.11 modelId 999 name cartoon
    20827 
    20828 > color #1.11/a:2552 pale violet red
    20829 
    20830 > color #1.11/a:2553 khaki
    20831 
    20832 > color #1.11/a:2554 green yellow
    20833 
    20834 > color #1.11/a:2555 aquamarine
    20835 
    20836 > color #1.11/a:2556 steel blue
    20837 
    20838 > color #1.11/Y orchid
    20839 
    20840 > color #1.11/a:2582 medium purple
    20841 
    20842 > color #1.11/a:2583 royal blue
    20843 
    20844 > color #1.11/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    20845 
    20846 > color to_show&@O* red
    20847 
    20848 > color to_show&@N* blue
    20849 
    20850 > color to_show&@P orange
    20851 
    20852 > name to_cartoon #999/a:2549-2559
    20853 
    20854 > name to_hbond #1.11/a:1955,2549-2559,2581-2584
    20855 
    20856 > name to_show #1.11/a:1955,2549-2559,2581-2584/Y:73-76
    20857 
    20858 > cartoon to_cartoon
    20859 
    20860 > show to_show
    20861 
    20862 > hide #1.11/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20863 
    20864 > hbonds to_hbond restrict to_show color yellow
    20865 
    20866 Atom specifier selects no atoms 
    20867 
    20868 > save /Users/dalar193/Desktop/A_loop/A_loop_7o1a.png height 600 width 600
    20869 > supersample 3
    20870 
    20871 > hide #!1.11 models
    20872 
    20873 > delete #999
    20874 
    20875 > show #!6.10 models
    20876 
    20877 > hide #6.10
    20878 
    20879 > ~cartoon #6.10
    20880 
    20881 > color #6.10 white
    20882 
    20883 > delete #999
    20884 
    20885 > combine #6.10 modelId 999 name cartoon
    20886 
    20887 > color #6.10/a:2552 pale violet red
    20888 
    20889 > color #6.10/a:2553 khaki
    20890 
    20891 > color #6.10/a:2554 green yellow
    20892 
    20893 > color #6.10/a:2555 aquamarine
    20894 
    20895 > color #6.10/a:2556 steel blue
    20896 
    20897 > color #6.10/Y orchid
    20898 
    20899 > color #6.10/a:2582 medium purple
    20900 
    20901 > color #6.10/a:2583 royal blue
    20902 
    20903 > color #6.10/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    20904 
    20905 > color to_show&@O* red
    20906 
    20907 > color to_show&@N* blue
    20908 
    20909 > color to_show&@P orange
    20910 
    20911 > name to_cartoon #999/a:2549-2559
    20912 
    20913 > name to_hbond #6.10/a:1955,2549-2559,2581-2584
    20914 
    20915 > name to_show #6.10/a:1955,2549-2559,2581-2584/Y:73-76
    20916 
    20917 > cartoon to_cartoon
    20918 
    20919 > show to_show
    20920 
    20921 > hide #6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20922 
    20923 > hbonds to_hbond restrict to_show color yellow
    20924 
    20925 16 hydrogen bonds found 
    20926 
    20927 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J83_cl0.png height 600 width
    20928 > 600 supersample 3
    20929 
    20930 > hide #!6.10 models
    20931 
    20932 > delete #999
    20933 
    20934 > show #!6.1 models
    20935 
    20936 > hide #6.1
    20937 
    20938 > ~cartoon #6.1
    20939 
    20940 > color #6.1 white
    20941 
    20942 > delete #999
    20943 
    20944 > combine #6.1 modelId 999 name cartoon
    20945 
    20946 > color #6.1/a:2552 pale violet red
    20947 
    20948 > color #6.1/a:2553 khaki
    20949 
    20950 > color #6.1/a:2554 green yellow
    20951 
    20952 > color #6.1/a:2555 aquamarine
    20953 
    20954 > color #6.1/a:2556 steel blue
    20955 
    20956 > color #6.1/Y orchid
    20957 
    20958 > color #6.1/a:2582 medium purple
    20959 
    20960 > color #6.1/a:2583 royal blue
    20961 
    20962 > color #6.1/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    20963 
    20964 > color to_show&@O* red
    20965 
    20966 > color to_show&@N* blue
    20967 
    20968 > color to_show&@P orange
    20969 
    20970 > name to_cartoon #999/a:2549-2559
    20971 
    20972 > name to_hbond #6.1/a:1955,2549-2559,2581-2584
    20973 
    20974 > name to_show #6.1/a:1955,2549-2559,2581-2584/Y:73-76
    20975 
    20976 > cartoon to_cartoon
    20977 
    20978 > show to_show
    20979 
    20980 > hide #6.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    20981 
    20982 > hbonds to_hbond restrict to_show color yellow
    20983 
    20984 16 hydrogen bonds found 
    20985 
    20986 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J84_cl1.png height 600 width
    20987 > 600 supersample 3
    20988 
    20989 > hide #!6.1 models
    20990 
    20991 > delete #999
    20992 
    20993 > show #!6.2 models
    20994 
    20995 > hide #6.2
    20996 
    20997 > ~cartoon #6.2
    20998 
    20999 > color #6.2 white
    21000 
    21001 > delete #999
    21002 
    21003 > combine #6.2 modelId 999 name cartoon
    21004 
    21005 > color #6.2/a:2552 pale violet red
    21006 
    21007 > color #6.2/a:2553 khaki
    21008 
    21009 > color #6.2/a:2554 green yellow
    21010 
    21011 > color #6.2/a:2555 aquamarine
    21012 
    21013 > color #6.2/a:2556 steel blue
    21014 
    21015 > color #6.2/Y orchid
    21016 
    21017 > color #6.2/a:2582 medium purple
    21018 
    21019 > color #6.2/a:2583 royal blue
    21020 
    21021 > color #6.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    21022 
    21023 > color to_show&@O* red
    21024 
    21025 > color to_show&@N* blue
    21026 
    21027 > color to_show&@P orange
    21028 
    21029 > name to_cartoon #999/a:2549-2559
    21030 
    21031 > name to_hbond #6.2/a:1955,2549-2559,2581-2584
    21032 
    21033 > name to_show #6.2/a:1955,2549-2559,2581-2584/Y:73-76
    21034 
    21035 > cartoon to_cartoon
    21036 
    21037 > show to_show
    21038 
    21039 > hide #6.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    21040 
    21041 > hbonds to_hbond restrict to_show color yellow
    21042 
    21043 22 hydrogen bonds found 
    21044 
    21045 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J85_cl2.png height 600 width
    21046 > 600 supersample 3
    21047 
    21048 > hide #!6.2 models
    21049 
    21050 > delete #999
    21051 
    21052 > show #!6.3 models
    21053 
    21054 > hide #6.3
    21055 
    21056 > ~cartoon #6.3
    21057 
    21058 > color #6.3 white
    21059 
    21060 > delete #999
    21061 
    21062 > combine #6.3 modelId 999 name cartoon
    21063 
    21064 > color #6.3/a:2552 pale violet red
    21065 
    21066 > color #6.3/a:2553 khaki
    21067 
    21068 > color #6.3/a:2554 green yellow
    21069 
    21070 > color #6.3/a:2555 aquamarine
    21071 
    21072 > color #6.3/a:2556 steel blue
    21073 
    21074 > color #6.3/Y orchid
    21075 
    21076 > color #6.3/a:2582 medium purple
    21077 
    21078 > color #6.3/a:2583 royal blue
    21079 
    21080 > color #6.3/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    21081 
    21082 > color to_show&@O* red
    21083 
    21084 > color to_show&@N* blue
    21085 
    21086 > color to_show&@P orange
    21087 
    21088 > name to_cartoon #999/a:2549-2559
    21089 
    21090 > name to_hbond #6.3/a:1955,2549-2559,2581-2584
    21091 
    21092 > name to_show #6.3/a:1955,2549-2559,2581-2584/Y:73-76
    21093 
    21094 > cartoon to_cartoon
    21095 
    21096 > show to_show
    21097 
    21098 > hide #6.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    21099 
    21100 > hbonds to_hbond restrict to_show color yellow
    21101 
    21102 16 hydrogen bonds found 
    21103 
    21104 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J86_cl3.png height 600 width
    21105 > 600 supersample 3
    21106 
    21107 > hide #!6.3 models
    21108 
    21109 > delete #999
    21110 
    21111 > show #!6.4 models
    21112 
    21113 > hide #6.4
    21114 
    21115 > ~cartoon #6.4
    21116 
    21117 > color #6.4 white
    21118 
    21119 > delete #999
    21120 
    21121 > combine #6.4 modelId 999 name cartoon
    21122 
    21123 > color #6.4/a:2552 pale violet red
    21124 
    21125 > color #6.4/a:2553 khaki
    21126 
    21127 > color #6.4/a:2554 green yellow
    21128 
    21129 > color #6.4/a:2555 aquamarine
    21130 
    21131 > color #6.4/a:2556 steel blue
    21132 
    21133 > color #6.4/Y orchid
    21134 
    21135 > color #6.4/a:2582 medium purple
    21136 
    21137 > color #6.4/a:2583 royal blue
    21138 
    21139 > color #6.4/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    21140 
    21141 > color to_show&@O* red
    21142 
    21143 > color to_show&@N* blue
    21144 
    21145 > color to_show&@P orange
    21146 
    21147 > name to_cartoon #999/a:2549-2559
    21148 
    21149 > name to_hbond #6.4/a:1955,2549-2559,2581-2584
    21150 
    21151 > name
    21152 
    21153 Missing or invalid "name" argument: Expected a text string 
    21154 
    21155 > hide #1.2
    21156 
    21157 > ~cartoon #1.2
    21158 
    21159 > color #1.2 white
    21160 
    21161 > delete #999
    21162 
    21163 > combine #1.2 modelId 999 name cartoon
    21164 
    21165 > color #1.2/a:2552 pale violet red
    21166 
    21167 > color #1.2/a:2553 khaki
    21168 
    21169 > color #1.2/a:2554 green yellow
    21170 
    21171 > color #1.2/a:2555 aquamarine
    21172 
    21173 > color #1.2/a:2556 steel blue
    21174 
    21175 > color #1.2/Y orchid
    21176 
    21177 > color #1.2/a:2582 medium purple
    21178 
    21179 > color #1.2/a:2583 royal blue
    21180 
    21181 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    21182 
    21183 > color to_show&@O* red
    21184 
    21185 > color to_show&@N* blue
    21186 
    21187 > color to_show&@P orange
    21188 
    21189 > name to_cartoon #999/a:2549-2559
    21190 
    21191 > name to_hbond #1.2/a:1955,2549-2559,2581-2584
    21192 
    21193 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    21194 
    21195 > cartoon to_cartoon
    21196 
    21197 > show to_show
    21198 
    21199 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    21200 
    21201 > hbonds to_hbond restrict to_show color yellow
    21202 
    21203 23 hydrogen bonds found 
    21204 
    21205 > show #!1.2 models
    21206 
    21207 > save /Users/dalar193/Desktop/image86.png supersample 3
    21208 
    21209 > color #1.2/a:2552 pale violet red
    21210 
    21211 > color #1.2/a:2553 khaki
    21212 
    21213 > color #1.2/a:2554 green yellow
    21214 
    21215 > color #1.2/a:2555 aquamarine
    21216 
    21217 > color #1.2/a:2556 steel blue
    21218 
    21219 > color #1.2/Y orchid
    21220 
    21221 > color #1.2/a:2582 medium purple
    21222 
    21223 > color #1.2/a:2583 royal blue
    21224 
    21225 > color to_show&@O* red
    21226 
    21227 > color to_show&@N* blue
    21228 
    21229 > color to_show&@P orange
    21230 
    21231 > save /Users/dalar193/Desktop/image87.png supersample 3
    21232 
    21233 > hbonds to_hbond restrict to_show color yellow
    21234 
    21235 23 hydrogen bonds found 
    21236 
    21237 > save /Users/dalar193/Desktop/image87.png supersample 3
    21238 
    21239 > color #1.2/a:2552 pale violet red
    21240 
    21241 > color #1.2/a:2553 khaki
    21242 
    21243 > color #1.2/a:2554 green yellow
    21244 
    21245 > color #1.2/a:2555 aquamarine
    21246 
    21247 > color #1.2/a:2556 steel blue
    21248 
    21249 > color #1.2/Y orchid
    21250 
    21251 > color #1.2/a:2582 medium purple
    21252 
    21253 > color #1.2/a:2583 royal blue
    21254 
    21255 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    21256 
    21257 > hbonds to_hbond restrict to_show color yellow
    21258 
    21259 23 hydrogen bonds found 
    21260 
    21261 > color #1.2 white
    21262 
    21263 > color #1.2/a:2552 pale violet red
    21264 
    21265 > color #1.2/a:2553 khaki
    21266 
    21267 > color #1.2/a:2554 green yellow
    21268 
    21269 > color #1.2/a:2555 aquamarine
    21270 
    21271 > color #1.2/a:2556 steel blue
    21272 
    21273 > color #1.2/Y orchid
    21274 
    21275 > color #1.2/a:2582 medium purple
    21276 
    21277 > color #1.2/a:2583 royal blue
    21278 
    21279 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    21280 
    21281 > hbonds to_hbond restrict to_show color yellow
    21282 
    21283 23 hydrogen bonds found 
    21284 
    21285 > save /Users/dalar193/Desktop/image88.png supersample 3
    21286 
    21287 > color #1.2 white
    21288 
    21289 > color #1.2/a:2552 pale violet red
    21290 
    21291 > color #1.2/a:2553 khaki
    21292 
    21293 > color #1.2/a:2554 green yellow
    21294 
    21295 > color #1.2/a:2555 aquamarine
    21296 
    21297 > color #1.2/a:2556 steel blue
    21298 
    21299 > color #1.2/Y orchid
    21300 
    21301 > color #1.2/a:2582 medium purple
    21302 
    21303 > color #1.2/a:2583 royal blue
    21304 
    21305 > hbonds to_hbond restrict to_show color yellow
    21306 
    21307 23 hydrogen bonds found 
    21308 
    21309 > save /Users/dalar193/Desktop/image89.png supersample 3
    21310 
    21311 > color #1.2 white
    21312 
    21313 > color #1.2/a:2552 pale violet red
    21314 
    21315 > color #1.2/a:2553 khaki
    21316 
    21317 > color #1.2/a:2554 green yellow
    21318 
    21319 > color #1.2/a:2555 aquamarine
    21320 
    21321 > color #1.2/a:2556 steel blue
    21322 
    21323 > color #1.2/Y orchid
    21324 
    21325 > color #1.2/a:2582 medium purple
    21326 
    21327 > color #1.2/a:2583 royal blue
    21328 
    21329 > color to_show&@P orange
    21330 
    21331 > hbonds to_hbond restrict to_show color yellow
    21332 
    21333 23 hydrogen bonds found 
    21334 
    21335 > color #1.2 white
    21336 
    21337 > color #1.2/a:2552 pale violet red
    21338 
    21339 > color #1.2/a:2553 khaki
    21340 
    21341 > color #1.2/a:2554 green yellow
    21342 
    21343 > color #1.2/a:2555 aquamarine
    21344 
    21345 > color #1.2/a:2556 steel blue
    21346 
    21347 > color #1.2/Y orchid
    21348 
    21349 > color #1.2/a:2582 medium purple
    21350 
    21351 > color #1.2/a:2583 royal blue
    21352 
    21353 > color #1.2/a,Y@P,OP1,OP2,O3',O5',C5',O2P,O1P white
    21354 
    21355 > color to_show&@P orange
    21356 
    21357 > hbonds to_hbond restrict to_show color yellow
    21358 
    21359 23 hydrogen bonds found 
    21360 
    21361 > color #1.2 white
    21362 
    21363 > color #1.2/a:2552 pale violet red
    21364 
    21365 > color #1.2/a:2553 khaki
    21366 
    21367 > color #1.2/a:2554 green yellow
    21368 
    21369 > color #1.2/a:2555 aquamarine
    21370 
    21371 > color #1.2/a:2556 steel blue
    21372 
    21373 > color #1.2/Y orchid
    21374 
    21375 > color #1.2/a:2582 medium purple
    21376 
    21377 > color #1.2/a:2583 royal blue
    21378 
    21379 > color #1.2/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    21380 
    21381 > color to_show&@P orange
    21382 
    21383 > hbonds to_hbond restrict to_show color yellow
    21384 
    21385 23 hydrogen bonds found 
    21386 
    21387 > save /Users/dalar193/Desktop/image90.png supersample 3
    21388 
    21389 > color #1.2 white
    21390 
    21391 > color #1.2/a:2552 pale violet red
    21392 
    21393 > color #1.2/a:2553 khaki
    21394 
    21395 > color #1.2/a:2554 green yellow
    21396 
    21397 > color #1.2/a:2555 aquamarine
    21398 
    21399 > color #1.2/a:2556 steel blue
    21400 
    21401 > color #1.2/Y orchid
    21402 
    21403 > color #1.2/a:2582 medium purple
    21404 
    21405 > color #1.2/a:2583 royal blue
    21406 
    21407 > color #1.2/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    21408 
    21409 > hbonds to_hbond restrict to_show color yellow
    21410 
    21411 23 hydrogen bonds found 
    21412 
    21413 > save /Users/dalar193/Desktop/image91.png supersample 3
    21414 
    21415 > hide #!1.2 models
    21416 
    21417 > show #!1.2 models
    21418 
    21419 > hide #1.2
    21420 
    21421 > ~cartoon #1.2
    21422 
    21423 > color #1.2 white
    21424 
    21425 > delete #999
    21426 
    21427 > combine #1.2 modelId 999 name cartoon
    21428 
    21429 > color #1.2/a:2552 pale violet red
    21430 
    21431 > color #1.2/a:2553 khaki
    21432 
    21433 > color #1.2/a:2554 green yellow
    21434 
    21435 > color #1.2/a:2555 aquamarine
    21436 
    21437 > color #1.2/a:2556 steel blue
    21438 
    21439 > color #1.2/Y orchid
    21440 
    21441 > color #1.2/a:2582 medium purple
    21442 
    21443 > color #1.2/a:2583 royal blue
    21444 
    21445 > color #1.2/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    21446 
    21447 > name to_cartoon #999/a:2549-2559
    21448 
    21449 > name to_hbond #1.2/a:1955,2549-2559,2581-2584
    21450 
    21451 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    21452 
    21453 > cartoon to_cartoon
    21454 
    21455 > show to_show
    21456 
    21457 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    21458 
    21459 > hbonds to_hbond restrict to_show color yellow
    21460 
    21461 23 hydrogen bonds found 
    21462 
    21463 > color #1.2/a:2581 olive
    21464 
    21465 > color #1.2/a:2583 medium purple
    21466 
    21467 > color #1.2/a:2581 olive
    21468 
    21469 > color #1.2/a:2583 medium purple
    21470 
    21471 > color #1.2/a:2582 royal blue
    21472 
    21473 > color #1.2/a:2581 teal
    21474 
    21475 > hide #1.2
    21476 
    21477 > ~cartoon #1.2
    21478 
    21479 > color #1.2 white
    21480 
    21481 > delete #999
    21482 
    21483 > combine #1.2 modelId 999 name cartoon
    21484 
    21485 > color #1.2/a:2552 pale violet red
    21486 
    21487 > color #1.2/a:2553 khaki
    21488 
    21489 > color #1.2/a:2554 green yellow
    21490 
    21491 > color #1.2/a:2555 aquamarine
    21492 
    21493 > color #1.2/a:2556 steel blue
    21494 
    21495 > color #1.2/Y orchid
    21496 
    21497 > color #1.2/a:2581 teal
    21498 
    21499 > color #1.2/a:2582 royal blue
    21500 
    21501 > color #1.2/a:2583 medium purple
    21502 
    21503 > color #1.2/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    21504 
    21505 > name to_cartoon #999/a:2549-2559
    21506 
    21507 > name to_hbond #1.2/a:1955,2549-2559,2581-2584
    21508 
    21509 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    21510 
    21511 > cartoon to_cartoon
    21512 
    21513 > show to_show
    21514 
    21515 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    21516 
    21517 > hbonds to_show restrict to_show color yellow
    21518 
    21519 24 hydrogen bonds found 
    21520 
    21521 > color #1.2/a:1955 pale green
    21522 
    21523 > color #1.2/a:1955 pale goldenrod
    21524 
    21525 > color #1.2/a:1955 cornsilk
    21526 
    21527 > color #1.2/a:1955 light green
    21528 
    21529 > color #1.2/a:1955 pale green
    21530 
    21531 > color #1.2/a:1955 beige
    21532 
    21533 > color #1.2/a:1955 pale goldenrod
    21534 
    21535 > color #1.2/a:1955 wheat
    21536 
    21537 > color #1.2/a:1955 pale turquoise
    21538 
    21539 > color #1.2/a:1955 pale green
    21540 
    21541 > hide #!1.2 models
    21542 
    21543 > show #!14.8 models
    21544 
    21545 > hide #14.8
    21546 
    21547 > ~cartoon #14.8
    21548 
    21549 > color #14.8 white
    21550 
    21551 > delete #999
    21552 
    21553 > combine #14.8 modelId 999 name cartoon
    21554 
    21555 > color #14.8/a:2552 pale violet red
    21556 
    21557 > color #14.8/a:2553 khaki
    21558 
    21559 > color #14.8/a:2554 green yellow
    21560 
    21561 > color #14.8/a:2555 aquamarine
    21562 
    21563 > color #14.8/a:2556 steel blue
    21564 
    21565 > color #14.8/Y orchid
    21566 
    21567 > color #14.8/a:1955 pale green
    21568 
    21569 > color #14.8/a:2581 teal
    21570 
    21571 > color #14.8/a:2582 royal blue
    21572 
    21573 > color #14.8/a:2583 medium purple
    21574 
    21575 > color #14.8/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    21576 
    21577 > name to_cartoon #999/a:2549-2559
    21578 
    21579 > name to_hbond #14.8/a:1955,2549-2559,2581-2584
    21580 
    21581 > name to_show #14.8/a:1955,2549-2559,2581-2584/Y:73-76
    21582 
    21583 > cartoon to_cartoon
    21584 
    21585 > show to_show
    21586 
    21587 > hide #14.8/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    21588 
    21589 > hbonds to_show restrict to_show color yellow
    21590 
    21591 21 hydrogen bonds found 
    21592 
    21593 > hide #!6.4 models
    21594 
    21595 > show #!6.4 models
    21596 
    21597 > hide #!6.4 models
    21598 
    21599 > hide #!14.8 models
    21600 
    21601 > graphics quality 6
    21602 
    21603 > show #!1.2 models
    21604 
    21605 > hide #1.2
    21606 
    21607 > ~cartoon #1.2
    21608 
    21609 > color #1.2 white
    21610 
    21611 > delete #999
    21612 
    21613 > combine #1.2 modelId 999 name cartoon
    21614 
    21615 > color #1.2/a:2552 pale violet red
    21616 
    21617 > color #1.2/a:2553 khaki
    21618 
    21619 > color #1.2/a:2554 green yellow
    21620 
    21621 > color #1.2/a:2555 aquamarine
    21622 
    21623 > color #1.2/a:2556 steel blue
    21624 
    21625 > color #1.2/Y orchid
    21626 
    21627 > color #1.2/a:1955 pale green
    21628 
    21629 > color #1.2/a:2581 teal
    21630 
    21631 > color #1.2/a:2582 royal blue
    21632 
    21633 > color #1.2/a:2583 medium purple
    21634 
    21635 > color #1.2/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    21636 
    21637 > name to_cartoon #999/a:2549-2559
    21638 
    21639 > name to_hbond #1.2/a:1955,2549-2559,2581-2584
    21640 
    21641 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    21642 
    21643 > cartoon to_cartoon
    21644 
    21645 > show to_show
    21646 
    21647 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    21648 
    21649 > hbonds to_show restrict to_show color yellow
    21650 
    21651 24 hydrogen bonds found 
    21652 
    21653 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    21654 > supersample 3
    21655 
    21656 > hide #!1.2 models
    21657 
    21658 > delete #999
    21659 
    21660 > show #!1.7 models
    21661 
    21662 > hide #1.7
    21663 
    21664 > ~cartoon #1.7
    21665 
    21666 > color #1.7 white
    21667 
    21668 > delete #999
    21669 
    21670 > combine #1.7 modelId 999 name cartoon
    21671 
    21672 > color #1.7/a:2552 pale violet red
    21673 
    21674 > color #1.7/a:2553 khaki
    21675 
    21676 > color #1.7/a:2554 green yellow
    21677 
    21678 > color #1.7/a:2555 aquamarine
    21679 
    21680 > color #1.7/a:2556 steel blue
    21681 
    21682 > color #1.7/Y orchid
    21683 
    21684 > color #1.7/a:1955 pale green
    21685 
    21686 > color #1.7/a:2581 teal
    21687 
    21688 > color #1.7/a:2582 royal blue
    21689 
    21690 > color #1.7/a:2583 medium purple
    21691 
    21692 > color #1.7/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    21693 
    21694 > name to_cartoon #999/a:2549-2559
    21695 
    21696 > name to_hbond #1.7/a:1955,2549-2559,2581-2584
    21697 
    21698 > name to_show #1.7/a:1955,2549-2559,2581-2584/Y:73-76
    21699 
    21700 > cartoon to_cartoon
    21701 
    21702 > show to_show
    21703 
    21704 > hide #1.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    21705 
    21706 > hbonds to_show restrict to_show color yellow
    21707 
    21708 16 hydrogen bonds found 
    21709 
    21710 > save /Users/dalar193/Desktop/A_loop/A_loop_8cgk.png height 600 width 600
    21711 > supersample 3
    21712 
    21713 > hide #!1.7 models
    21714 
    21715 > delete #999
    21716 
    21717 > show #!6.10 models
    21718 
    21719 > hide #6.10
    21720 
    21721 > ~cartoon #6.10
    21722 
    21723 > color #6.10 white
    21724 
    21725 > delete #999
    21726 
    21727 > combine #6.10 modelId 999 name cartoon
    21728 
    21729 > color #6.10/a:2552 pale violet red
    21730 
    21731 > color #6.10/a:2553 khaki
    21732 
    21733 > color #6.10/a:2554 green yellow
    21734 
    21735 > color #6.10/a:2555 aquamarine
    21736 
    21737 > color #6.10/a:2556 steel blue
    21738 
    21739 > color #6.10/Y orchid
    21740 
    21741 > color #6.10/a:1955 pale green
    21742 
    21743 > color #6.10/a:2581 teal
    21744 
    21745 > color #6.10/a:2582 royal blue
    21746 
    21747 > color #6.10/a:2583 medium purple
    21748 
    21749 > color #6.10/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    21750 
    21751 > name to_cartoon #999/a:2549-2559
    21752 
    21753 > name to_hbond #6.10/a:1955,2549-2559,2581-2584
    21754 
    21755 > name to_show #6.10/a:1955,2549-2559,2581-2584/Y:73-76
    21756 
    21757 > cartoon to_cartoon
    21758 
    21759 > show to_show
    21760 
    21761 > hide #6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    21762 
    21763 > hbonds to_show restrict to_show color yellow
    21764 
    21765 16 hydrogen bonds found 
    21766 
    21767 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J83_cl0.png height 600 width
    21768 > 600 supersample 3
    21769 
    21770 > hide #!6.10 models
    21771 
    21772 > delete #999
    21773 
    21774 > show #!6.1 models
    21775 
    21776 > hide #6.1
    21777 
    21778 > ~cartoon #6.1
    21779 
    21780 > color #6.1 white
    21781 
    21782 > delete #999
    21783 
    21784 > combine #6.1 modelId 999 name cartoon
    21785 
    21786 > color #6.1/a:2552 pale violet red
    21787 
    21788 > color #6.1/a:2553 khaki
    21789 
    21790 > color #6.1/a:2554 green yellow
    21791 
    21792 > color #6.1/a:2555 aquamarine
    21793 
    21794 > color #6.1/a:2556 steel blue
    21795 
    21796 > color #6.1/Y orchid
    21797 
    21798 > color #6.1/a:1955 pale green
    21799 
    21800 > color #6.1/a:2581 teal
    21801 
    21802 > color #6.1/a:2582 royal blue
    21803 
    21804 > color #6.1/a:2583 medium purple
    21805 
    21806 > color #6.1/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    21807 
    21808 > name to_cartoon #999/a:2549-2559
    21809 
    21810 > name to_hbond #6.1/a:1955,2549-2559,2581-2584
    21811 
    21812 > name to_show #6.1/a:1955,2549-2559,2581-2584/Y:73-76
    21813 
    21814 > cartoon to_cartoon
    21815 
    21816 > show to_show
    21817 
    21818 > hide #6.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    21819 
    21820 > hbonds to_show restrict to_show color yellow
    21821 
    21822 19 hydrogen bonds found 
    21823 
    21824 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J84_cl1.png height 600 width
    21825 > 600 supersample 3
    21826 
    21827 > hide #!6.1 models
    21828 
    21829 > delete #999
    21830 
    21831 > show #!6.2 models
    21832 
    21833 > hide #6.2
    21834 
    21835 > ~cartoon #6.2
    21836 
    21837 > color #6.2 white
    21838 
    21839 > delete #999
    21840 
    21841 > combine #6.2 modelId 999 name cartoon
    21842 
    21843 > color #6.2/a:2552 pale violet red
    21844 
    21845 > color #6.2/a:2553 khaki
    21846 
    21847 > color #6.2/a:2554 green yellow
    21848 
    21849 > color #6.2/a:2555 aquamarine
    21850 
    21851 > color #6.2/a:2556 steel blue
    21852 
    21853 > color #6.2/Y orchid
    21854 
    21855 > color #6.2/a:1955 pale green
    21856 
    21857 > color #6.2/a:2581 teal
    21858 
    21859 > color #6.2/a:2582 royal blue
    21860 
    21861 > color #6.2/a:2583 medium purple
    21862 
    21863 > color #6.2/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    21864 
    21865 > name to_cartoon #999/a:2549-2559
    21866 
    21867 > name to_hbond #6.2/a:1955,2549-2559,2581-2584
    21868 
    21869 > name to_show #6.2/a:1955,2549-2559,2581-2584/Y:73-76
    21870 
    21871 > cartoon to_cartoon
    21872 
    21873 > show to_show
    21874 
    21875 > hide #6.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    21876 
    21877 > hbonds to_show restrict to_show color yellow
    21878 
    21879 23 hydrogen bonds found 
    21880 
    21881 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J85_cl2.png height 600 width
    21882 > 600 supersample 3
    21883 
    21884 > hide #!6.2 models
    21885 
    21886 > delete #999
    21887 
    21888 > show #!6.3 models
    21889 
    21890 > hide #6.3
    21891 
    21892 > ~cartoon #6.3
    21893 
    21894 > color #6.3 white
    21895 
    21896 > delete #999
    21897 
    21898 > combine #6.3 modelId 999 name cartoon
    21899 
    21900 > color #6.3/a:2552 pale violet red
    21901 
    21902 > color #6.3/a:2553 khaki
    21903 
    21904 > color #6.3/a:2554 green yellow
    21905 
    21906 > color #6.3/a:2555 aquamarine
    21907 
    21908 > color #6.3/a:2556 steel blue
    21909 
    21910 > color #6.3/Y orchid
    21911 
    21912 > color #6.3/a:1955 pale green
    21913 
    21914 > color #6.3/a:2581 teal
    21915 
    21916 > color #6.3/a:2582 royal blue
    21917 
    21918 > color #6.3/a:2583 medium purple
    21919 
    21920 > color #6.3/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    21921 
    21922 > name to_cartoon #999/a:2549-2559
    21923 
    21924 > name to_hbond #6.3/a:1955,2549-2559,2581-2584
    21925 
    21926 > name to_show #6.3/a:1955,2549-2559,2581-2584/Y:73-76
    21927 
    21928 > cartoon to_cartoon
    21929 
    21930 > show to_show
    21931 
    21932 > hide #6.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    21933 
    21934 > hbonds to_show restrict to_show color yellow
    21935 
    21936 16 hydrogen bonds found 
    21937 
    21938 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J86_cl3.png height 600 width
    21939 > 600 supersample 3
    21940 
    21941 > hide #!6.3 models
    21942 
    21943 > delete #999
    21944 
    21945 > show #!6.4 models
    21946 
    21947 > hide #6.4
    21948 
    21949 > ~cartoon #6.4
    21950 
    21951 > color #6.4 white
    21952 
    21953 > delete #999
    21954 
    21955 > combine #6.4 modelId 999 name cartoon
    21956 
    21957 > color #6.4/a:2552 pale violet red
    21958 
    21959 > color #6.4/a:2553 khaki
    21960 
    21961 > color #6.4/a:2554 green yellow
    21962 
    21963 > color #6.4/a:2555 aquamarine
    21964 
    21965 > color #6.4/a:2556 steel blue
    21966 
    21967 > color #6.4/Y orchid
    21968 
    21969 > color #6.4/a:1955 pale green
    21970 
    21971 > color #6.4/a:2581 teal
    21972 
    21973 > color #6.4/a:2582 royal blue
    21974 
    21975 > color #6.4/a:2583 medium purple
    21976 
    21977 > color #6.4/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    21978 
    21979 > name to_cartoon #999/a:2549-2559
    21980 
    21981 > name to_hbond #6.4/a:1955,2549-2559,2581-2584
    21982 
    21983 > name to_show #6.4/a:1955,2549-2559,2581-2584/Y:73-76
    21984 
    21985 > cartoon to_cartoon
    21986 
    21987 > show to_show
    21988 
    21989 > hide #6.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    21990 
    21991 > hbonds to_show restrict to_show color yellow
    21992 
    21993 22 hydrogen bonds found 
    21994 
    21995 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J87_cl4.png height 600 width
    21996 > 600 supersample 3
    21997 
    21998 > hide #!6.4 models
    21999 
    22000 > delete #999
    22001 
    22002 > show #!6.5 models
    22003 
    22004 > hide #6.5
    22005 
    22006 > ~cartoon #6.5
    22007 
    22008 > color #6.5 white
    22009 
    22010 > delete #999
    22011 
    22012 > combine #6.5 modelId 999 name cartoon
    22013 
    22014 > color #6.5/a:2552 pale violet red
    22015 
    22016 > color #6.5/a:2553 khaki
    22017 
    22018 > color #6.5/a:2554 green yellow
    22019 
    22020 > color #6.5/a:2555 aquamarine
    22021 
    22022 > color #6.5/a:2556 steel blue
    22023 
    22024 > color #6.5/Y orchid
    22025 
    22026 > color #6.5/a:1955 pale green
    22027 
    22028 > color #6.5/a:2581 teal
    22029 
    22030 > color #6.5/a:2582 royal blue
    22031 
    22032 > color #6.5/a:2583 medium purple
    22033 
    22034 > color #6.5/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22035 
    22036 > name to_cartoon #999/a:2549-2559
    22037 
    22038 > name to_hbond #6.5/a:1955,2549-2559,2581-2584
    22039 
    22040 > name to_show #6.5/a:1955,2549-2559,2581-2584/Y:73-76
    22041 
    22042 > cartoon to_cartoon
    22043 
    22044 > show to_show
    22045 
    22046 > hide #6.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22047 
    22048 > hbonds to_show restrict to_show color yellow
    22049 
    22050 16 hydrogen bonds found 
    22051 
    22052 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J88_cl5.png height 600 width
    22053 > 600 supersample 3
    22054 
    22055 > hide #!6.5 models
    22056 
    22057 > delete #999
    22058 
    22059 > show #!6.6 models
    22060 
    22061 > hide #6.6
    22062 
    22063 > ~cartoon #6.6
    22064 
    22065 > color #6.6 white
    22066 
    22067 > delete #999
    22068 
    22069 > combine #6.6 modelId 999 name cartoon
    22070 
    22071 > color #6.6/a:2552 pale violet red
    22072 
    22073 > color #6.6/a:2553 khaki
    22074 
    22075 > color #6.6/a:2554 green yellow
    22076 
    22077 > color #6.6/a:2555 aquamarine
    22078 
    22079 > color #6.6/a:2556 steel blue
    22080 
    22081 > color #6.6/Y orchid
    22082 
    22083 > color #6.6/a:1955 pale green
    22084 
    22085 > color #6.6/a:2581 teal
    22086 
    22087 > color #6.6/a:2582 royal blue
    22088 
    22089 > color #6.6/a:2583 medium purple
    22090 
    22091 > color #6.6/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22092 
    22093 > name to_cartoon #999/a:2549-2559
    22094 
    22095 > name to_hbond #6.6/a:1955,2549-2559,2581-2584
    22096 
    22097 > name to_show #6.6/a:1955,2549-2559,2581-2584/Y:73-76
    22098 
    22099 > cartoon to_cartoon
    22100 
    22101 > show to_show
    22102 
    22103 > hide #6.6/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22104 
    22105 > hbonds to_show restrict to_show color yellow
    22106 
    22107 22 hydrogen bonds found 
    22108 
    22109 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J89_cl6.png height 600 width
    22110 > 600 supersample 3
    22111 
    22112 > hide #!6.6 models
    22113 
    22114 > delete #999
    22115 
    22116 > show #!6.7 models
    22117 
    22118 > hide #6.7
    22119 
    22120 > ~cartoon #6.7
    22121 
    22122 > color #6.7 white
    22123 
    22124 > delete #999
    22125 
    22126 > combine #6.7 modelId 999 name cartoon
    22127 
    22128 > color #6.7/a:2552 pale violet red
    22129 
    22130 > color #6.7/a:2553 khaki
    22131 
    22132 > color #6.7/a:2554 green yellow
    22133 
    22134 > color #6.7/a:2555 aquamarine
    22135 
    22136 > color #6.7/a:2556 steel blue
    22137 
    22138 > color #6.7/Y orchid
    22139 
    22140 > color #6.7/a:1955 pale green
    22141 
    22142 > color #6.7/a:2581 teal
    22143 
    22144 > color #6.7/a:2582 royal blue
    22145 
    22146 > color #6.7/a:2583 medium purple
    22147 
    22148 > color #6.7/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22149 
    22150 > name to_cartoon #999/a:2549-2559
    22151 
    22152 > name to_hbond #6.7/a:1955,2549-2559,2581-2584
    22153 
    22154 > name to_show #6.7/a:1955,2549-2559,2581-2584/Y:73-76
    22155 
    22156 > cartoon to_cartoon
    22157 
    22158 > show to_show
    22159 
    22160 > hide #6.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22161 
    22162 > hbonds to_show restrict to_show color yellow
    22163 
    22164 20 hydrogen bonds found 
    22165 
    22166 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J90_cl7.png height 600 width
    22167 > 600 supersample 3
    22168 
    22169 > hide #!6.7 models
    22170 
    22171 > delete #999
    22172 
    22173 > show #!6.8 models
    22174 
    22175 > hide #6.8
    22176 
    22177 > ~cartoon #6.8
    22178 
    22179 > color #6.8 white
    22180 
    22181 > delete #999
    22182 
    22183 > combine #6.8 modelId 999 name cartoon
    22184 
    22185 > color #6.8/a:2552 pale violet red
    22186 
    22187 > color #6.8/a:2553 khaki
    22188 
    22189 > color #6.8/a:2554 green yellow
    22190 
    22191 > color #6.8/a:2555 aquamarine
    22192 
    22193 > color #6.8/a:2556 steel blue
    22194 
    22195 > color #6.8/Y orchid
    22196 
    22197 > color #6.8/a:1955 pale green
    22198 
    22199 > color #6.8/a:2581 teal
    22200 
    22201 > color #6.8/a:2582 royal blue
    22202 
    22203 > color #6.8/a:2583 medium purple
    22204 
    22205 > color #6.8/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22206 
    22207 > name to_cartoon #999/a:2549-2559
    22208 
    22209 > name to_hbond #6.8/a:1955,2549-2559,2581-2584
    22210 
    22211 > name to_show #6.8/a:1955,2549-2559,2581-2584/Y:73-76
    22212 
    22213 > cartoon to_cartoon
    22214 
    22215 > show to_show
    22216 
    22217 > hide #6.8/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22218 
    22219 > hbonds to_show restrict to_show color yellow
    22220 
    22221 15 hydrogen bonds found 
    22222 
    22223 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J91_cl8.png height 600 width
    22224 > 600 supersample 3
    22225 
    22226 > hide #!6.8 models
    22227 
    22228 > delete #999
    22229 
    22230 > show #!6.9 models
    22231 
    22232 > hide #6.9
    22233 
    22234 > ~cartoon #6.9
    22235 
    22236 > color #6.9 white
    22237 
    22238 > delete #999
    22239 
    22240 > combine #6.9 modelId 999 name cartoon
    22241 
    22242 > color #6.9/a:2552 pale violet red
    22243 
    22244 > color #6.9/a:2553 khaki
    22245 
    22246 > color #6.9/a:2554 green yellow
    22247 
    22248 > color #6.9/a:2555 aquamarine
    22249 
    22250 > color #6.9/a:2556 steel blue
    22251 
    22252 > color #6.9/Y orchid
    22253 
    22254 > color #6.9/a:1955 pale green
    22255 
    22256 > color #6.9/a:2581 teal
    22257 
    22258 > color #6.9/a:2582 royal blue
    22259 
    22260 > color #6.9/a:2583 medium purple
    22261 
    22262 > color #6.9/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22263 
    22264 > name to_cartoon #999/a:2549-2559
    22265 
    22266 > name to_hbond #6.9/a:1955,2549-2559,2581-2584
    22267 
    22268 > name to_show #6.9/a:1955,2549-2559,2581-2584/Y:73-76
    22269 
    22270 > cartoon to_cartoon
    22271 
    22272 > show to_show
    22273 
    22274 > hide #6.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22275 
    22276 > hbonds to_show restrict to_show color yellow
    22277 
    22278 18 hydrogen bonds found 
    22279 
    22280 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J92_cl9.png height 600 width
    22281 > 600 supersample 3
    22282 
    22283 > hide #!6.9 models
    22284 
    22285 > delete #999
    22286 
    22287 > show #!14.10 models
    22288 
    22289 > hide #14.10
    22290 
    22291 > ~cartoon #14.10
    22292 
    22293 > color #14.10 white
    22294 
    22295 > delete #999
    22296 
    22297 > combine #14.10 modelId 999 name cartoon
    22298 
    22299 > color #14.10/a:2552 pale violet red
    22300 
    22301 > color #14.10/a:2553 khaki
    22302 
    22303 > color #14.10/a:2554 green yellow
    22304 
    22305 > color #14.10/a:2555 aquamarine
    22306 
    22307 > color #14.10/a:2556 steel blue
    22308 
    22309 > color #14.10/Y orchid
    22310 
    22311 > color #14.10/a:1955 pale green
    22312 
    22313 > color #14.10/a:2581 teal
    22314 
    22315 > color #14.10/a:2582 royal blue
    22316 
    22317 > color #14.10/a:2583 medium purple
    22318 
    22319 > color #14.10/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22320 
    22321 > name to_cartoon #999/a:2549-2559
    22322 
    22323 > name to_hbond #14.10/a:1955,2549-2559,2581-2584
    22324 
    22325 > name to_show #14.10/a:1955,2549-2559,2581-2584/Y:73-76
    22326 
    22327 > cartoon to_cartoon
    22328 
    22329 > show to_show
    22330 
    22331 > hide #14.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22332 
    22333 > hbonds to_show restrict to_show color yellow
    22334 
    22335 17 hydrogen bonds found 
    22336 
    22337 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J53_c0.png height 600 width
    22338 > 600 supersample 3
    22339 
    22340 > hide #!14.10 models
    22341 
    22342 > delete #999
    22343 
    22344 > show #!14.1 models
    22345 
    22346 > hide #14.1
    22347 
    22348 > ~cartoon #14.1
    22349 
    22350 > color #14.1 white
    22351 
    22352 > delete #999
    22353 
    22354 > combine #14.1 modelId 999 name cartoon
    22355 
    22356 > color #14.1/a:2552 pale violet red
    22357 
    22358 > color #14.1/a:2553 khaki
    22359 
    22360 > color #14.1/a:2554 green yellow
    22361 
    22362 > color #14.1/a:2555 aquamarine
    22363 
    22364 > color #14.1/a:2556 steel blue
    22365 
    22366 > color #14.1/Y orchid
    22367 
    22368 > color #14.1/a:1955 pale green
    22369 
    22370 > color #14.1/a:2581 teal
    22371 
    22372 > color #14.1/a:2582 royal blue
    22373 
    22374 > color #14.1/a:2583 medium purple
    22375 
    22376 > color #14.1/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22377 
    22378 > name to_cartoon #999/a:2549-2559
    22379 
    22380 > name to_hbond #14.1/a:1955,2549-2559,2581-2584
    22381 
    22382 > name to_show #14.1/a:1955,2549-2559,2581-2584/Y:73-76
    22383 
    22384 > cartoon to_cartoon
    22385 
    22386 > show to_show
    22387 
    22388 > hide #14.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22389 
    22390 > hbonds to_show restrict to_show color yellow
    22391 
    22392 18 hydrogen bonds found 
    22393 
    22394 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J54_c1.png height 600 width
    22395 > 600 supersample 3
    22396 
    22397 > hide #!14.1 models
    22398 
    22399 > delete #999
    22400 
    22401 > show #!14.2 models
    22402 
    22403 > hide #14.2
    22404 
    22405 > ~cartoon #14.2
    22406 
    22407 > color #14.2 white
    22408 
    22409 > delete #999
    22410 
    22411 > combine #14.2 modelId 999 name cartoon
    22412 
    22413 > color #14.2/a:2552 pale violet red
    22414 
    22415 > color #14.2/a:2553 khaki
    22416 
    22417 > color #14.2/a:2554 green yellow
    22418 
    22419 > color #14.2/a:2555 aquamarine
    22420 
    22421 > color #14.2/a:2556 steel blue
    22422 
    22423 > color #14.2/Y orchid
    22424 
    22425 > color #14.2/a:1955 pale green
    22426 
    22427 > color #14.2/a:2581 teal
    22428 
    22429 > color #14.2/a:2582 royal blue
    22430 
    22431 > color #14.2/a:2583 medium purple
    22432 
    22433 > color #14.2/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22434 
    22435 > name to_cartoon #999/a:2549-2559
    22436 
    22437 > name to_hbond #14.2/a:1955,2549-2559,2581-2584
    22438 
    22439 > name to_show #14.2/a:1955,2549-2559,2581-2584/Y:73-76
    22440 
    22441 > cartoon to_cartoon
    22442 
    22443 > show to_show
    22444 
    22445 > hide #14.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22446 
    22447 > hbonds to_show restrict to_show color yellow
    22448 
    22449 18 hydrogen bonds found 
    22450 
    22451 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J55_c2.png height 600 width
    22452 > 600 supersample 3
    22453 
    22454 > hide #!14.2 models
    22455 
    22456 > delete #999
    22457 
    22458 > show #!14.3 models
    22459 
    22460 > hide #14.3
    22461 
    22462 > ~cartoon #14.3
    22463 
    22464 > color #14.3 white
    22465 
    22466 > delete #999
    22467 
    22468 > combine #14.3 modelId 999 name cartoon
    22469 
    22470 > color #14.3/a:2552 pale violet red
    22471 
    22472 > color #14.3/a:2553 khaki
    22473 
    22474 > color #14.3/a:2554 green yellow
    22475 
    22476 > color #14.3/a:2555 aquamarine
    22477 
    22478 > color #14.3/a:2556 steel blue
    22479 
    22480 > color #14.3/Y orchid
    22481 
    22482 > color #14.3/a:1955 pale green
    22483 
    22484 > color #14.3/a:2581 teal
    22485 
    22486 > color #14.3/a:2582 royal blue
    22487 
    22488 > color #14.3/a:2583 medium purple
    22489 
    22490 > color #14.3/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22491 
    22492 > name to_cartoon #999/a:2549-2559
    22493 
    22494 > name to_hbond #14.3/a:1955,2549-2559,2581-2584
    22495 
    22496 > name to_show #14.3/a:1955,2549-2559,2581-2584/Y:73-76
    22497 
    22498 > cartoon to_cartoon
    22499 
    22500 > show to_show
    22501 
    22502 > hide #14.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22503 
    22504 > hbonds to_show restrict to_show color yellow
    22505 
    22506 24 hydrogen bonds found 
    22507 
    22508 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J56_c3.png height 600 width
    22509 > 600 supersample 3
    22510 
    22511 > hide #!14.3 models
    22512 
    22513 > delete #999
    22514 
    22515 > show #!14.4 models
    22516 
    22517 > hide #14.4
    22518 
    22519 > ~cartoon #14.4
    22520 
    22521 > color #14.4 white
    22522 
    22523 > delete #999
    22524 
    22525 > combine #14.4 modelId 999 name cartoon
    22526 
    22527 > color #14.4/a:2552 pale violet red
    22528 
    22529 > color #14.4/a:2553 khaki
    22530 
    22531 > color #14.4/a:2554 green yellow
    22532 
    22533 > color #14.4/a:2555 aquamarine
    22534 
    22535 > color #14.4/a:2556 steel blue
    22536 
    22537 > color #14.4/Y orchid
    22538 
    22539 > color #14.4/a:1955 pale green
    22540 
    22541 > color #14.4/a:2581 teal
    22542 
    22543 > color #14.4/a:2582 royal blue
    22544 
    22545 > color #14.4/a:2583 medium purple
    22546 
    22547 > color #14.4/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22548 
    22549 > name to_cartoon #999/a:2549-2559
    22550 
    22551 > name to_hbond #14.4/a:1955,2549-2559,2581-2584
    22552 
    22553 > name to_show #14.4/a:1955,2549-2559,2581-2584/Y:73-76
    22554 
    22555 > cartoon to_cartoon
    22556 
    22557 > show to_show
    22558 
    22559 > hide #14.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22560 
    22561 > hbonds to_show restrict to_show color yellow
    22562 
    22563 17 hydrogen bonds found 
    22564 
    22565 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J57_c4.png height 600 width
    22566 > 600 supersample 3
    22567 
    22568 > hide #!14.4 models
    22569 
    22570 > delete #999
    22571 
    22572 > show #!14.5 models
    22573 
    22574 > hide #14.5
    22575 
    22576 > ~cartoon #14.5
    22577 
    22578 > color #14.5 white
    22579 
    22580 > delete #999
    22581 
    22582 > combine #14.5 modelId 999 name cartoon
    22583 
    22584 > color #14.5/a:2552 pale violet red
    22585 
    22586 > color #14.5/a:2553 khaki
    22587 
    22588 > color #14.5/a:2554 green yellow
    22589 
    22590 > color #14.5/a:2555 aquamarine
    22591 
    22592 > color #14.5/a:2556 steel blue
    22593 
    22594 > color #14.5/Y orchid
    22595 
    22596 > color #14.5/a:1955 pale green
    22597 
    22598 > color #14.5/a:2581 teal
    22599 
    22600 > color #14.5/a:2582 royal blue
    22601 
    22602 > color #14.5/a:2583 medium purple
    22603 
    22604 > color #14.5/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22605 
    22606 > name to_cartoon #999/a:2549-2559
    22607 
    22608 > name to_hbond #14.5/a:1955,2549-2559,2581-2584
    22609 
    22610 > name to_show #14.5/a:1955,2549-2559,2581-2584/Y:73-76
    22611 
    22612 > cartoon to_cartoon
    22613 
    22614 > show to_show
    22615 
    22616 > hide #14.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22617 
    22618 > hbonds to_show restrict to_show color yellow
    22619 
    22620 16 hydrogen bonds found 
    22621 
    22622 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J58_c5.png height 600 width
    22623 > 600 supersample 3
    22624 
    22625 > hide #!14.5 models
    22626 
    22627 > delete #999
    22628 
    22629 > show #!14.6 models
    22630 
    22631 > hide #14.6
    22632 
    22633 > ~cartoon #14.6
    22634 
    22635 > color #14.6 white
    22636 
    22637 > delete #999
    22638 
    22639 > combine #14.6 modelId 999 name cartoon
    22640 
    22641 > color #14.6/a:2552 pale violet red
    22642 
    22643 > color #14.6/a:2553 khaki
    22644 
    22645 > color #14.6/a:2554 green yellow
    22646 
    22647 > color #14.6/a:2555 aquamarine
    22648 
    22649 > color #14.6/a:2556 steel blue
    22650 
    22651 > color #14.6/Y orchid
    22652 
    22653 > color #14.6/a:1955 pale green
    22654 
    22655 > color #14.6/a:2581 teal
    22656 
    22657 > color #14.6/a:2582 royal blue
    22658 
    22659 > color #14.6/a:2583 medium purple
    22660 
    22661 > color #14.6/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22662 
    22663 > name to_cartoon #999/a:2549-2559
    22664 
    22665 > name to_hbond #14.6/a:1955,2549-2559,2581-2584
    22666 
    22667 > name to_show #14.6/a:1955,2549-2559,2581-2584/Y:73-76
    22668 
    22669 > cartoon to_cartoon
    22670 
    22671 > show to_show
    22672 
    22673 > hide #14.6/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22674 
    22675 > hbonds to_show restrict to_show color yellow
    22676 
    22677 20 hydrogen bonds found 
    22678 
    22679 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J59_c6.png height 600 width
    22680 > 600 supersample 3
    22681 
    22682 > hide #!14.6 models
    22683 
    22684 > delete #999
    22685 
    22686 > show #!14.7 models
    22687 
    22688 > hide #14.7
    22689 
    22690 > ~cartoon #14.7
    22691 
    22692 > color #14.7 white
    22693 
    22694 > delete #999
    22695 
    22696 > combine #14.7 modelId 999 name cartoon
    22697 
    22698 > color #14.7/a:2552 pale violet red
    22699 
    22700 > color #14.7/a:2553 khaki
    22701 
    22702 > color #14.7/a:2554 green yellow
    22703 
    22704 > color #14.7/a:2555 aquamarine
    22705 
    22706 > color #14.7/a:2556 steel blue
    22707 
    22708 > color #14.7/Y orchid
    22709 
    22710 > color #14.7/a:1955 pale green
    22711 
    22712 > color #14.7/a:2581 teal
    22713 
    22714 > color #14.7/a:2582 royal blue
    22715 
    22716 > color #14.7/a:2583 medium purple
    22717 
    22718 > color #14.7/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22719 
    22720 > name to_cartoon #999/a:2549-2559
    22721 
    22722 > name to_hbond #14.7/a:1955,2549-2559,2581-2584
    22723 
    22724 > name to_show #14.7/a:1955,2549-2559,2581-2584/Y:73-76
    22725 
    22726 > cartoon to_cartoon
    22727 
    22728 > show to_show
    22729 
    22730 > hide #14.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22731 
    22732 > hbonds to_show restrict to_show color yellow
    22733 
    22734 22 hydrogen bonds found 
    22735 
    22736 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J60_c7.png height 600 width
    22737 > 600 supersample 3
    22738 
    22739 > hide #!14.7 models
    22740 
    22741 > delete #999
    22742 
    22743 > show #!14.8 models
    22744 
    22745 > hide #14.8
    22746 
    22747 > ~cartoon #14.8
    22748 
    22749 > color #14.8 white
    22750 
    22751 > delete #999
    22752 
    22753 > combine #14.8 modelId 999 name cartoon
    22754 
    22755 > color #14.8/a:2552 pale violet red
    22756 
    22757 > color #14.8/a:2553 khaki
    22758 
    22759 > color #14.8/a:2554 green yellow
    22760 
    22761 > color #14.8/a:2555 aquamarine
    22762 
    22763 > color #14.8/a:2556 steel blue
    22764 
    22765 > color #14.8/Y orchid
    22766 
    22767 > color #14.8/a:1955 pale green
    22768 
    22769 > color #14.8/a:2581 teal
    22770 
    22771 > color #14.8/a:2582 royal blue
    22772 
    22773 > color #14.8/a:2583 medium purple
    22774 
    22775 > color #14.8/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22776 
    22777 > name to_cartoon #999/a:2549-2559
    22778 
    22779 > name to_hbond #14.8/a:1955,2549-2559,2581-2584
    22780 
    22781 > name to_show #14.8/a:1955,2549-2559,2581-2584/Y:73-76
    22782 
    22783 > cartoon to_cartoon
    22784 
    22785 > show to_show
    22786 
    22787 > hide #14.8/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22788 
    22789 > hbonds to_show restrict to_show color yellow
    22790 
    22791 21 hydrogen bonds found 
    22792 
    22793 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J61_c8.png height 600 width
    22794 > 600 supersample 3
    22795 
    22796 > hide #!14.8 models
    22797 
    22798 > delete #999
    22799 
    22800 > show #!14.9 models
    22801 
    22802 > hide #14.9
    22803 
    22804 > ~cartoon #14.9
    22805 
    22806 > color #14.9 white
    22807 
    22808 > delete #999
    22809 
    22810 > combine #14.9 modelId 999 name cartoon
    22811 
    22812 > color #14.9/a:2552 pale violet red
    22813 
    22814 > color #14.9/a:2553 khaki
    22815 
    22816 > color #14.9/a:2554 green yellow
    22817 
    22818 > color #14.9/a:2555 aquamarine
    22819 
    22820 > color #14.9/a:2556 steel blue
    22821 
    22822 > color #14.9/Y orchid
    22823 
    22824 > color #14.9/a:1955 pale green
    22825 
    22826 > color #14.9/a:2581 teal
    22827 
    22828 > color #14.9/a:2582 royal blue
    22829 
    22830 > color #14.9/a:2583 medium purple
    22831 
    22832 > color #14.9/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22833 
    22834 > name to_cartoon #999/a:2549-2559
    22835 
    22836 > name to_hbond #14.9/a:1955,2549-2559,2581-2584
    22837 
    22838 > name to_show #14.9/a:1955,2549-2559,2581-2584/Y:73-76
    22839 
    22840 > cartoon to_cartoon
    22841 
    22842 > show to_show
    22843 
    22844 > hide #14.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22845 
    22846 > hbonds to_show restrict to_show color yellow
    22847 
    22848 27 hydrogen bonds found 
    22849 
    22850 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J62_c9.png height 600 width
    22851 > 600 supersample 3
    22852 
    22853 > hide #!14.9 models
    22854 
    22855 > delete #999
    22856 
    22857 > show #!22.1 models
    22858 
    22859 > hide #22.1
    22860 
    22861 > ~cartoon #22.1
    22862 
    22863 > color #22.1 white
    22864 
    22865 > delete #999
    22866 
    22867 > combine #22.1 modelId 999 name cartoon
    22868 
    22869 > color #22.1/a:2552 pale violet red
    22870 
    22871 > color #22.1/a:2553 khaki
    22872 
    22873 > color #22.1/a:2554 green yellow
    22874 
    22875 > color #22.1/a:2555 aquamarine
    22876 
    22877 > color #22.1/a:2556 steel blue
    22878 
    22879 > color #22.1/Y orchid
    22880 
    22881 > color #22.1/a:1955 pale green
    22882 
    22883 > color #22.1/a:2581 teal
    22884 
    22885 > color #22.1/a:2582 royal blue
    22886 
    22887 > color #22.1/a:2583 medium purple
    22888 
    22889 > color #22.1/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22890 
    22891 > name to_cartoon #999/a:2549-2559
    22892 
    22893 > name to_hbond #22.1/a:1955,2549-2559,2581-2584
    22894 
    22895 > name to_show #22.1/a:1955,2549-2559,2581-2584/Y:73-76
    22896 
    22897 > cartoon to_cartoon
    22898 
    22899 > show to_show
    22900 
    22901 > hide #22.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22902 
    22903 > hbonds to_show restrict to_show color yellow
    22904 
    22905 24 hydrogen bonds found 
    22906 
    22907 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J111_ape.png height 600 width
    22908 > 600 supersample 3
    22909 
    22910 > hide #!22.1 models
    22911 
    22912 > delete #999
    22913 
    22914 > show #!22.2 models
    22915 
    22916 > hide #22.2
    22917 
    22918 > ~cartoon #22.2
    22919 
    22920 > color #22.2 white
    22921 
    22922 > delete #999
    22923 
    22924 > combine #22.2 modelId 999 name cartoon
    22925 
    22926 > color #22.2/a:2552 pale violet red
    22927 
    22928 > color #22.2/a:2553 khaki
    22929 
    22930 > color #22.2/a:2554 green yellow
    22931 
    22932 > color #22.2/a:2555 aquamarine
    22933 
    22934 > color #22.2/a:2556 steel blue
    22935 
    22936 > color #22.2/Y orchid
    22937 
    22938 > color #22.2/a:1955 pale green
    22939 
    22940 > color #22.2/a:2581 teal
    22941 
    22942 > color #22.2/a:2582 royal blue
    22943 
    22944 > color #22.2/a:2583 medium purple
    22945 
    22946 > color #22.2/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    22947 
    22948 > name to_cartoon #999/a:2549-2559
    22949 
    22950 > name to_hbond #22.2/a:1955,2549-2559,2581-2584
    22951 
    22952 > name to_show #22.2/a:1955,2549-2559,2581-2584/Y:73-76
    22953 
    22954 > cartoon to_cartoon
    22955 
    22956 > show to_show
    22957 
    22958 > hide #22.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    22959 
    22960 > hbonds to_show restrict to_show color yellow
    22961 
    22962 25 hydrogen bonds found 
    22963 
    22964 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J112_ap.png height 600 width
    22965 > 600 supersample 3
    22966 
    22967 > hide #!22.2 models
    22968 
    22969 > delete #999
    22970 
    22971 > show #!22.3 models
    22972 
    22973 > hide #22.3
    22974 
    22975 > ~cartoon #22.3
    22976 
    22977 > color #22.3 white
    22978 
    22979 > delete #999
    22980 
    22981 > combine #22.3 modelId 999 name cartoon
    22982 
    22983 > color #22.3/a:2552 pale violet red
    22984 
    22985 > color #22.3/a:2553 khaki
    22986 
    22987 > color #22.3/a:2554 green yellow
    22988 
    22989 > color #22.3/a:2555 aquamarine
    22990 
    22991 > color #22.3/a:2556 steel blue
    22992 
    22993 > color #22.3/Y orchid
    22994 
    22995 > color #22.3/a:1955 pale green
    22996 
    22997 > color #22.3/a:2581 teal
    22998 
    22999 > color #22.3/a:2582 royal blue
    23000 
    23001 > color #22.3/a:2583 medium purple
    23002 
    23003 > color #22.3/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    23004 
    23005 > name to_cartoon #999/a:2549-2559
    23006 
    23007 > name to_hbond #22.3/a:1955,2549-2559,2581-2584
    23008 
    23009 > name to_show #22.3/a:1955,2549-2559,2581-2584/Y:73-76
    23010 
    23011 > cartoon to_cartoon
    23012 
    23013 > show to_show
    23014 
    23015 > hide #22.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23016 
    23017 > hbonds to_show restrict to_show color yellow
    23018 
    23019 16 hydrogen bonds found 
    23020 
    23021 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J113_pe.png height 600 width
    23022 > 600 supersample 3
    23023 
    23024 > hide #!22.3 models
    23025 
    23026 > delete #999
    23027 
    23028 > show #!22.4 models
    23029 
    23030 > hide #22.4
    23031 
    23032 > ~cartoon #22.4
    23033 
    23034 > color #22.4 white
    23035 
    23036 > delete #999
    23037 
    23038 > combine #22.4 modelId 999 name cartoon
    23039 
    23040 > color #22.4/a:2552 pale violet red
    23041 
    23042 > color #22.4/a:2553 khaki
    23043 
    23044 > color #22.4/a:2554 green yellow
    23045 
    23046 > color #22.4/a:2555 aquamarine
    23047 
    23048 > color #22.4/a:2556 steel blue
    23049 
    23050 > color #22.4/Y orchid
    23051 
    23052 > color #22.4/a:1955 pale green
    23053 
    23054 > color #22.4/a:2581 teal
    23055 
    23056 > color #22.4/a:2582 royal blue
    23057 
    23058 > color #22.4/a:2583 medium purple
    23059 
    23060 > color #22.4/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    23061 
    23062 > name to_cartoon #999/a:2549-2559
    23063 
    23064 > name to_hbond #22.4/a:1955,2549-2559,2581-2584
    23065 
    23066 > name to_show #22.4/a:1955,2549-2559,2581-2584/Y:73-76
    23067 
    23068 > cartoon to_cartoon
    23069 
    23070 > show to_show
    23071 
    23072 > hide #22.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23073 
    23074 > hbonds to_show restrict to_show color yellow
    23075 
    23076 18 hydrogen bonds found 
    23077 
    23078 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J124_e.png height 600 width
    23079 > 600 supersample 3
    23080 
    23081 > hide #!22.4 models
    23082 
    23083 > delete #999
    23084 
    23085 > graphics quality 1
    23086 
    23087 > show #!1.2 models
    23088 
    23089 > graphics selection color green width 1
    23090 
    23091 > select clear
    23092 
    23093 [Repeated 1 time(s)]
    23094 
    23095 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    23096 
    23097 > select add #1.2.2
    23098 
    23099 24 pseudobonds, 1 model selected 
    23100 
    23101 > select subtract #1.2.2
    23102 
    23103 Nothing selected 
    23104 
    23105 > hide #!1.2 models
    23106 
    23107 > graphics quality 6
    23108 
    23109 > show #!1.2 models
    23110 
    23111 > hide #1.2
    23112 
    23113 > ~cartoon #1.2
    23114 
    23115 > color #1.2 white
    23116 
    23117 > delete #999
    23118 
    23119 > combine #1.2 modelId 999 name cartoon
    23120 
    23121 > color #1.2/a:2552 pale violet red
    23122 
    23123 > color #1.2/a:2553 khaki
    23124 
    23125 > color #1.2/a:2554 green yellow
    23126 
    23127 > color #1.2/a:2555 aquamarine
    23128 
    23129 > color #1.2/a:2556 steel blue
    23130 
    23131 > color #1.2/Y orchid
    23132 
    23133 > color #1.2/a:1955 pale green
    23134 
    23135 > color #1.2/a:2581 teal
    23136 
    23137 > color #1.2/a:2582 royal blue
    23138 
    23139 > color #1.2/a:2583 medium purple
    23140 
    23141 > color #1.2/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    23142 
    23143 > name to_cartoon #999/a:2549-2559
    23144 
    23145 > name to_hbond #1.2/a:1955,2549-2559,2581-2584
    23146 
    23147 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    23148 
    23149 > cartoon to_cartoon
    23150 
    23151 > show to_show
    23152 
    23153 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23154 
    23155 > hbonds to_show restrict to_show color yellow
    23156 
    23157 24 hydrogen bonds found 
    23158 
    23159 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    23160 > supersample 3
    23161 
    23162 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    23163 
    23164 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    23165 > supersample 3
    23166 
    23167 > hide #!1.2 models
    23168 
    23169 > delete #999
    23170 
    23171 > view A_loop
    23172 
    23173 > graphics quality 6
    23174 
    23175 > show #!1.2 models
    23176 
    23177 > hide #1.2
    23178 
    23179 > ~cartoon #1.2
    23180 
    23181 > color #1.2 white
    23182 
    23183 > delete #999
    23184 
    23185 > combine #1.2 modelId 999 name cartoon
    23186 
    23187 > color #1.2/a:2552 pale violet red
    23188 
    23189 > color #1.2/a:2553 khaki
    23190 
    23191 > color #1.2/a:2554 green yellow
    23192 
    23193 > color #1.2/a:2555 aquamarine
    23194 
    23195 > color #1.2/a:2556 steel blue
    23196 
    23197 > color #1.2/Y orchid
    23198 
    23199 > color #1.2/a:1955 pale green
    23200 
    23201 > color #1.2/a:2581 teal
    23202 
    23203 > color #1.2/a:2582 royal blue
    23204 
    23205 > color #1.2/a:2583 medium purple
    23206 
    23207 > color #1.2/a,Y@P,OP1,OP2,O3',O5',O2P,O1P white
    23208 
    23209 > name to_cartoon #999/a:2549-2559
    23210 
    23211 > name to_hbond #1.2/a:1955,2549-2559,2581-2584
    23212 
    23213 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    23214 
    23215 > cartoon to_cartoon
    23216 
    23217 > show to_show
    23218 
    23219 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23220 
    23221 > hbonds to_show restrict to_show color yellow
    23222 
    23223 24 hydrogen bonds found 
    23224 
    23225 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    23226 > supersample 3
    23227 
    23228 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    23229 
    23230 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    23231 > supersample 3
    23232 
    23233 > hide #!1.2 models
    23234 
    23235 > delete #999
    23236 
    23237 > show #!6.10 models
    23238 
    23239 > hide #6.10
    23240 
    23241 > ~cartoon #6.10
    23242 
    23243 > color #6.10 white
    23244 
    23245 > delete #999
    23246 
    23247 > combine #6.10 modelId 999 name cartoon
    23248 
    23249 > color #6.10/a:2552 pale violet red
    23250 
    23251 > color #6.10/a:2553 khaki
    23252 
    23253 > color #6.10/a:2554 green yellow
    23254 
    23255 > color #6.10/a:2555 aquamarine
    23256 
    23257 > color #6.10/a:2556 steel blue
    23258 
    23259 > color #6.10/Y orchid
    23260 
    23261 > color #6.10/a:1955 pale green
    23262 
    23263 > color #6.10/a:2581 teal
    23264 
    23265 > color #6.10/a:2582 royal blue
    23266 
    23267 > color #6.10/a:2583 medium purple
    23268 
    23269 > name to_cartoon #999/a:2549-2559
    23270 
    23271 > name to_hbond #6.10/a:1955,2549-2559,2581-2584
    23272 
    23273 > name to_show #6.10/a:1955,2549-2559,2581-2584/Y:73-76
    23274 
    23275 > cartoon to_cartoon
    23276 
    23277 > show to_show
    23278 
    23279 > hide #6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23280 
    23281 > hbonds to_show restrict to_show color yellow
    23282 
    23283 16 hydrogen bonds found 
    23284 
    23285 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J83_cl0.png height 600 width
    23286 > 600 supersample 3
    23287 
    23288 > hide #!6.10 models
    23289 
    23290 > delete #999
    23291 
    23292 > show #!1.2 models
    23293 
    23294 > cartoon #1.2/a:2549-2559
    23295 
    23296 > color #1.2/a:2552 pale violet red
    23297 
    23298 > color #1.2/a:2553 khaki
    23299 
    23300 > color #1.2/a:2554 green yellow
    23301 
    23302 > color #1.2/a:2555 aquamarine
    23303 
    23304 > color #1.2/a:2556 steel blue
    23305 
    23306 > color #1.2 white target c
    23307 
    23308 > color #1.2 white
    23309 
    23310 > color #1.2/a:2552 pale violet red target b
    23311 
    23312 > color #1.2/a:2553 khaki target b
    23313 
    23314 > color #1.2/a:2554 green yellow target b
    23315 
    23316 > color #1.2/a:2555 aquamarine target b
    23317 
    23318 > color #1.2/a:2556 steel blue target b
    23319 
    23320 > color #1.2/Y orchid target b
    23321 
    23322 > color #1.2/a:1955 pale green target b
    23323 
    23324 > color #1.2/a:2581 teal target b
    23325 
    23326 > color #1.2/a:2582 royal blue target b
    23327 
    23328 > color #1.2/a:2583 medium purple target b
    23329 
    23330 > color #1.2/a:2552 pale violet red target a
    23331 
    23332 > color #1.2/a:2553 khaki target a
    23333 
    23334 > color #1.2/a:2554 green yellow target a
    23335 
    23336 > color #1.2/a:2555 aquamarine target a
    23337 
    23338 > color #1.2/a:2556 steel blue target a
    23339 
    23340 > color #1.2/a:2552 pale violet red target a
    23341 
    23342 > color #1.2/a:2553 khaki target a
    23343 
    23344 > color #1.2/a:2554 green yellow target a
    23345 
    23346 > color #1.2/a:2555 aquamarine target a
    23347 
    23348 > color #1.2/a:2556 steel blue target a
    23349 
    23350 > color #1.2/Y orchid target a
    23351 
    23352 > color #1.2/a:1955 pale green target a
    23353 
    23354 > color #1.2/a:2581 teal target a
    23355 
    23356 > color #1.2/a:2582 royal blue target a
    23357 
    23358 > color #1.2/a:2583 medium purple target a
    23359 
    23360 > color #1.2 yellow target p
    23361 
    23362 > hide #!1.2 models
    23363 
    23364 > show #!1.2 models
    23365 
    23366 > hide #!1.2 models
    23367 
    23368 > show #!6.10 models
    23369 
    23370 > hide #6.10
    23371 
    23372 > ~cartoon #6.10
    23373 
    23374 > color #6.10 white
    23375 
    23376 > color #6.10/a:2552 pale violet red
    23377 
    23378 > color #6.10/a:2553 khaki
    23379 
    23380 > color #6.10/a:2554 green yellow
    23381 
    23382 > color #6.10/a:2555 aquamarine
    23383 
    23384 > color #6.10/a:2556 steel blue
    23385 
    23386 > color #6.10/Y orchid
    23387 
    23388 > color #6.10/a:1955 pale green
    23389 
    23390 > color #6.10/a:2581 teal
    23391 
    23392 > color #6.10/a:2582 royal blue
    23393 
    23394 > color #6.10/a:2583 medium purple
    23395 
    23396 > color #1.2 white target c
    23397 
    23398 > name to_cartoon #6.10/a:2549-2559
    23399 
    23400 > name to_show #6.10/a:1955,2549-2559,2581-2584/Y:73-76
    23401 
    23402 > cartoon to_cartoon
    23403 
    23404 > show to_show
    23405 
    23406 > hide #6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23407 
    23408 > hbonds to_show restrict to_show color yellow
    23409 
    23410 16 hydrogen bonds found 
    23411 
    23412 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J83_cl0.png height 600 width
    23413 > 600 supersample 3
    23414 
    23415 > hide #!6.10 models
    23416 
    23417 > delete #999
    23418 
    23419 > show #!4.10 models
    23420 
    23421 > hide #!4.10 models
    23422 
    23423 > show #!4.10 models
    23424 
    23425 > hide #!4.10 models
    23426 
    23427 > show #!6.10 models
    23428 
    23429 [Repeated 1 time(s)]
    23430 
    23431 > hide #6.10
    23432 
    23433 > ~cartoon #6.10
    23434 
    23435 > color #6.10 white
    23436 
    23437 > color #6.10/a:2552 pale violet red
    23438 
    23439 > color #6.10/a:2553 khaki
    23440 
    23441 > color #6.10/a:2554 green yellow
    23442 
    23443 > color #6.10/a:2555 aquamarine
    23444 
    23445 > color #6.10/a:2556 steel blue
    23446 
    23447 > color #6.10/Y orchid
    23448 
    23449 > color #6.10/a:1955 pale green
    23450 
    23451 > color #6.10/a:2581 teal
    23452 
    23453 > color #6.10/a:2582 royal blue
    23454 
    23455 > color #6.10/a:2583 medium purple
    23456 
    23457 > color #6.10 white target c
    23458 
    23459 > name to_cartoon #6.10/a:2549-2559
    23460 
    23461 > name to_show #6.10/a:1955,2549-2559,2581-2584/Y:73-76
    23462 
    23463 > cartoon to_cartoon
    23464 
    23465 > show to_show
    23466 
    23467 > hide #6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23468 
    23469 > hbonds to_show restrict to_show color yellow
    23470 
    23471 16 hydrogen bonds found 
    23472 
    23473 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J83_cl0.png height 600 width
    23474 > 600 supersample 3
    23475 
    23476 > hide #!6.10 models
    23477 
    23478 > delete #999
    23479 
    23480 > graphics quality 6
    23481 
    23482 > show #!1.2 models
    23483 
    23484 > hide #1.2
    23485 
    23486 > ~cartoon #1.2
    23487 
    23488 > color #1.2 white
    23489 
    23490 > color #1.2/a:2552 pale violet red
    23491 
    23492 > color #1.2/a:2553 khaki
    23493 
    23494 > color #1.2/a:2554 green yellow
    23495 
    23496 > color #1.2/a:2555 aquamarine
    23497 
    23498 > color #1.2/a:2556 steel blue
    23499 
    23500 > color #1.2/Y orchid
    23501 
    23502 > color #1.2/a:1955 pale green
    23503 
    23504 > color #1.2/a:2581 teal
    23505 
    23506 > color #1.2/a:2582 royal blue
    23507 
    23508 > color #1.2/a:2583 medium purple
    23509 
    23510 > color #1.2 white target c
    23511 
    23512 > name to_cartoon #1.2/a:2549-2559
    23513 
    23514 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    23515 
    23516 > cartoon to_cartoon
    23517 
    23518 > show to_show
    23519 
    23520 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23521 
    23522 > hbonds to_show restrict to_show color yellow
    23523 
    23524 24 hydrogen bonds found 
    23525 
    23526 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    23527 > supersample 3
    23528 
    23529 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    23530 
    23531 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    23532 > supersample 3
    23533 
    23534 > hide #!1.2 models
    23535 
    23536 > delete #999
    23537 
    23538 > show #!1.7 models
    23539 
    23540 > hide #1.7
    23541 
    23542 > ~cartoon #1.7
    23543 
    23544 > color #1.7 white
    23545 
    23546 > color #1.7/a:2552 pale violet red
    23547 
    23548 > color #1.7/a:2553 khaki
    23549 
    23550 > color #1.7/a:2554 green yellow
    23551 
    23552 > color #1.7/a:2555 aquamarine
    23553 
    23554 > color #1.7/a:2556 steel blue
    23555 
    23556 > color #1.7/Y orchid
    23557 
    23558 > color #1.7/a:1955 pale green
    23559 
    23560 > color #1.7/a:2581 teal
    23561 
    23562 > color #1.7/a:2582 royal blue
    23563 
    23564 > color #1.7/a:2583 medium purple
    23565 
    23566 > color #1.7 white target c
    23567 
    23568 > name to_cartoon #1.7/a:2549-2559
    23569 
    23570 > name to_show #1.7/a:1955,2549-2559,2581-2584/Y:73-76
    23571 
    23572 > cartoon to_cartoon
    23573 
    23574 > show to_show
    23575 
    23576 > hide #1.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23577 
    23578 > hbonds to_show restrict to_show color yellow
    23579 
    23580 16 hydrogen bonds found 
    23581 
    23582 > save /Users/dalar193/Desktop/A_loop/A_loop_8cgk.png height 600 width 600
    23583 > supersample 3
    23584 
    23585 > hide #!1.7 models
    23586 
    23587 > delete #999
    23588 
    23589 > show #!6.10 models
    23590 
    23591 > hide #6.10
    23592 
    23593 > ~cartoon #6.10
    23594 
    23595 > color #6.10 white
    23596 
    23597 > color #6.10/a:2552 pale violet red
    23598 
    23599 > color #6.10/a:2553 khaki
    23600 
    23601 > color #6.10/a:2554 green yellow
    23602 
    23603 > color #6.10/a:2555 aquamarine
    23604 
    23605 > color #6.10/a:2556 steel blue
    23606 
    23607 > color #6.10/Y orchid
    23608 
    23609 > color #6.10/a:1955 pale green
    23610 
    23611 > color #6.10/a:2581 teal
    23612 
    23613 > color #6.10/a:2582 royal blue
    23614 
    23615 > color #6.10/a:2583 medium purple
    23616 
    23617 > color #6.10 white target c
    23618 
    23619 > name to_cartoon #6.10/a:2549-2559
    23620 
    23621 > name to_show #6.10/a:1955,2549-2559,2581-2584/Y:73-76
    23622 
    23623 > cartoon to_cartoon
    23624 
    23625 > show to_show
    23626 
    23627 > hide #6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23628 
    23629 > hbonds to_show restrict to_show color yellow
    23630 
    23631 16 hydrogen bonds found 
    23632 
    23633 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J83_cl0.png height 600 width
    23634 > 600 supersample 3
    23635 
    23636 > hide #!6.10 models
    23637 
    23638 > delete #999
    23639 
    23640 > show #!6.1 models
    23641 
    23642 > hide #6.1
    23643 
    23644 > ~cartoon #6.1
    23645 
    23646 > color #6.1 white
    23647 
    23648 > color #6.1/a:2552 pale violet red
    23649 
    23650 > color #6.1/a:2553 khaki
    23651 
    23652 > color #6.1/a:2554 green yellow
    23653 
    23654 > color #6.1/a:2555 aquamarine
    23655 
    23656 > color #6.1/a:2556 steel blue
    23657 
    23658 > color #6.1/Y orchid
    23659 
    23660 > color #6.1/a:1955 pale green
    23661 
    23662 > color #6.1/a:2581 teal
    23663 
    23664 > color #6.1/a:2582 royal blue
    23665 
    23666 > color #6.1/a:2583 medium purple
    23667 
    23668 > color #6.1 white target c
    23669 
    23670 > name to_cartoon #6.1/a:2549-2559
    23671 
    23672 > name to_show #6.1/a:1955,2549-2559,2581-2584/Y:73-76
    23673 
    23674 > cartoon to_cartoon
    23675 
    23676 > show to_show
    23677 
    23678 > hide #6.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23679 
    23680 > hbonds to_show restrict to_show color yellow
    23681 
    23682 19 hydrogen bonds found 
    23683 
    23684 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J84_cl1.png height 600 width
    23685 > 600 supersample 3
    23686 
    23687 > hide #!6.1 models
    23688 
    23689 > delete #999
    23690 
    23691 > show #!6.2 models
    23692 
    23693 > hide #6.2
    23694 
    23695 > ~cartoon #6.2
    23696 
    23697 > color #6.2 white
    23698 
    23699 > color #6.2/a:2552 pale violet red
    23700 
    23701 > color #6.2/a:2553 khaki
    23702 
    23703 > color #6.2/a:2554 green yellow
    23704 
    23705 > color #6.2/a:2555 aquamarine
    23706 
    23707 > color #6.2/a:2556 steel blue
    23708 
    23709 > color #6.2/Y orchid
    23710 
    23711 > color #6.2/a:1955 pale green
    23712 
    23713 > color #6.2/a:2581 teal
    23714 
    23715 > color #6.2/a:2582 royal blue
    23716 
    23717 > color #6.2/a:2583 medium purple
    23718 
    23719 > color #6.2 white target c
    23720 
    23721 > name to_cartoon #6.2/a:2549-2559
    23722 
    23723 > name to_show #6.2/a:1955,2549-2559,2581-2584/Y:73-76
    23724 
    23725 > cartoon to_cartoon
    23726 
    23727 > show to_show
    23728 
    23729 > hide #6.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23730 
    23731 > hbonds to_show restrict to_show color yellow
    23732 
    23733 23 hydrogen bonds found 
    23734 
    23735 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J85_cl2.png height 600 width
    23736 > 600 supersample 3
    23737 
    23738 > hide #!6.2 models
    23739 
    23740 > delete #999
    23741 
    23742 > show #!6.3 models
    23743 
    23744 > hide #6.3
    23745 
    23746 > ~cartoon #6.3
    23747 
    23748 > color #6.3 white
    23749 
    23750 > color #6.3/a:2552 pale violet red
    23751 
    23752 > color #6.3/a:2553 khaki
    23753 
    23754 > color #6.3/a:2554 green yellow
    23755 
    23756 > color #6.3/a:2555 aquamarine
    23757 
    23758 > color #6.3/a:2556 steel blue
    23759 
    23760 > color #6.3/Y orchid
    23761 
    23762 > color #6.3/a:1955 pale green
    23763 
    23764 > color #6.3/a:2581 teal
    23765 
    23766 > color #6.3/a:2582 royal blue
    23767 
    23768 > color #6.3/a:2583 medium purple
    23769 
    23770 > color #6.3 white target c
    23771 
    23772 > name to_cartoon #6.3/a:2549-2559
    23773 
    23774 > name to_show #6.3/a:1955,2549-2559,2581-2584/Y:73-76
    23775 
    23776 > cartoon to_cartoon
    23777 
    23778 > show to_show
    23779 
    23780 > hide #6.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23781 
    23782 > hbonds to_show restrict to_show color yellow
    23783 
    23784 16 hydrogen bonds found 
    23785 
    23786 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J86_cl3.png height 600 width
    23787 > 600 supersample 3
    23788 
    23789 > hide #!6.3 models
    23790 
    23791 > delete #999
    23792 
    23793 > show #!6.4 models
    23794 
    23795 > hide #6.4
    23796 
    23797 > ~cartoon #6.4
    23798 
    23799 > color #6.4 white
    23800 
    23801 > color #6.4/a:2552 pale violet red
    23802 
    23803 > color #6.4/a:2553 khaki
    23804 
    23805 > color #6.4/a:2554 green yellow
    23806 
    23807 > color #6.4/a:2555 aquamarine
    23808 
    23809 > color #6.4/a:2556 steel blue
    23810 
    23811 > color #6.4/Y orchid
    23812 
    23813 > color #6.4/a:1955 pale green
    23814 
    23815 > color #6.4/a:2581 teal
    23816 
    23817 > color #6.4/a:2582 royal blue
    23818 
    23819 > color #6.4/a:2583 medium purple
    23820 
    23821 > color #6.4 white target c
    23822 
    23823 > name to_cartoon #6.4/a:2549-2559
    23824 
    23825 > name to_show #6.4/a:1955,2549-2559,2581-2584/Y:73-76
    23826 
    23827 > cartoon to_cartoon
    23828 
    23829 > show to_show
    23830 
    23831 > hide #6.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23832 
    23833 > hbonds to_show restrict to_show color yellow
    23834 
    23835 22 hydrogen bonds found 
    23836 
    23837 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J87_cl4.png height 600 width
    23838 > 600 supersample 3
    23839 
    23840 > hide #!6.4 models
    23841 
    23842 > delete #999
    23843 
    23844 > show #!6.5 models
    23845 
    23846 > hide #6.5
    23847 
    23848 > ~cartoon #6.5
    23849 
    23850 > color #6.5 white
    23851 
    23852 > color #6.5/a:2552 pale violet red
    23853 
    23854 > color #6.5/a:2553 khaki
    23855 
    23856 > color #6.5/a:2554 green yellow
    23857 
    23858 > color #6.5/a:2555 aquamarine
    23859 
    23860 > color #6.5/a:2556 steel blue
    23861 
    23862 > color #6.5/Y orchid
    23863 
    23864 > color #6.5/a:1955 pale green
    23865 
    23866 > color #6.5/a:2581 teal
    23867 
    23868 > color #6.5/a:2582 royal blue
    23869 
    23870 > color #6.5/a:2583 medium purple
    23871 
    23872 > color #6.5 white target c
    23873 
    23874 > name to_cartoon #6.5/a:2549-2559
    23875 
    23876 > name to_show #6.5/a:1955,2549-2559,2581-2584/Y:73-76
    23877 
    23878 > cartoon to_cartoon
    23879 
    23880 > show to_show
    23881 
    23882 > hide #6.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23883 
    23884 > hbonds to_show restrict to_show color yellow
    23885 
    23886 16 hydrogen bonds found 
    23887 
    23888 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J88_cl5.png height 600 width
    23889 > 600 supersample 3
    23890 
    23891 > hide #!6.5 models
    23892 
    23893 > delete #999
    23894 
    23895 > show #!6.6 models
    23896 
    23897 > hide #6.6
    23898 
    23899 > ~cartoon #6.6
    23900 
    23901 > color #6.6 white
    23902 
    23903 > color #6.6/a:2552 pale violet red
    23904 
    23905 > color #6.6/a:2553 khaki
    23906 
    23907 > color #6.6/a:2554 green yellow
    23908 
    23909 > color #6.6/a:2555 aquamarine
    23910 
    23911 > color #6.6/a:2556 steel blue
    23912 
    23913 > color #6.6/Y orchid
    23914 
    23915 > color #6.6/a:1955 pale green
    23916 
    23917 > color #6.6/a:2581 teal
    23918 
    23919 > color #6.6/a:2582 royal blue
    23920 
    23921 > color #6.6/a:2583 medium purple
    23922 
    23923 > color #6.6 white target c
    23924 
    23925 > name to_cartoon #6.6/a:2549-2559
    23926 
    23927 > name to_show #6.6/a:1955,2549-2559,2581-2584/Y:73-76
    23928 
    23929 > cartoon to_cartoon
    23930 
    23931 > show to_show
    23932 
    23933 > hide #6.6/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23934 
    23935 > hbonds to_show restrict to_show color yellow
    23936 
    23937 22 hydrogen bonds found 
    23938 
    23939 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J89_cl6.png height 600 width
    23940 > 600 supersample 3
    23941 
    23942 > hide #!6.6 models
    23943 
    23944 > delete #999
    23945 
    23946 > show #!6.7 models
    23947 
    23948 > hide #6.7
    23949 
    23950 > ~cartoon #6.7
    23951 
    23952 > color #6.7 white
    23953 
    23954 > color #6.7/a:2552 pale violet red
    23955 
    23956 > color #6.7/a:2553 khaki
    23957 
    23958 > color #6.7/a:2554 green yellow
    23959 
    23960 > color #6.7/a:2555 aquamarine
    23961 
    23962 > color #6.7/a:2556 steel blue
    23963 
    23964 > color #6.7/Y orchid
    23965 
    23966 > color #6.7/a:1955 pale green
    23967 
    23968 > color #6.7/a:2581 teal
    23969 
    23970 > color #6.7/a:2582 royal blue
    23971 
    23972 > color #6.7/a:2583 medium purple
    23973 
    23974 > color #6.7 white target c
    23975 
    23976 > name to_cartoon #6.7/a:2549-2559
    23977 
    23978 > name to_show #6.7/a:1955,2549-2559,2581-2584/Y:73-76
    23979 
    23980 > cartoon to_cartoon
    23981 
    23982 > show to_show
    23983 
    23984 > hide #6.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    23985 
    23986 > hbonds to_show restrict to_show color yellow
    23987 
    23988 20 hydrogen bonds found 
    23989 
    23990 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J90_cl7.png height 600 width
    23991 > 600 supersample 3
    23992 
    23993 > hide #!6.7 models
    23994 
    23995 > delete #999
    23996 
    23997 > show #!6.8 models
    23998 
    23999 > hide #6.8
    24000 
    24001 > ~cartoon #6.8
    24002 
    24003 > color #6.8 white
    24004 
    24005 > color #6.8/a:2552 pale violet red
    24006 
    24007 > color #6.8/a:2553 khaki
    24008 
    24009 > color #6.8/a:2554 green yellow
    24010 
    24011 > color #6.8/a:2555 aquamarine
    24012 
    24013 > color #6.8/a:2556 steel blue
    24014 
    24015 > color #6.8/Y orchid
    24016 
    24017 > color #6.8/a:1955 pale green
    24018 
    24019 > color #6.8/a:2581 teal
    24020 
    24021 > color #6.8/a:2582 royal blue
    24022 
    24023 > color #6.8/a:2583 medium purple
    24024 
    24025 > color #6.8 white target c
    24026 
    24027 > name to_cartoon #6.8/a:2549-2559
    24028 
    24029 > name to_show #6.8/a:1955,2549-2559,2581-2584/Y:73-76
    24030 
    24031 > cartoon to_cartoon
    24032 
    24033 > show to_show
    24034 
    24035 > hide #6.8/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24036 
    24037 > hbonds to_show restrict to_show color yellow
    24038 
    24039 15 hydrogen bonds found 
    24040 
    24041 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J91_cl8.png height 600 width
    24042 > 600 supersample 3
    24043 
    24044 > hide #!6.8 models
    24045 
    24046 > delete #999
    24047 
    24048 > show #!6.9 models
    24049 
    24050 > hide #6.9
    24051 
    24052 > ~cartoon #6.9
    24053 
    24054 > color #6.9 white
    24055 
    24056 > color #6.9/a:2552 pale violet red
    24057 
    24058 > color #6.9/a:2553 khaki
    24059 
    24060 > color #6.9/a:2554 green yellow
    24061 
    24062 > color #6.9/a:2555 aquamarine
    24063 
    24064 > color #6.9/a:2556 steel blue
    24065 
    24066 > color #6.9/Y orchid
    24067 
    24068 > color #6.9/a:1955 pale green
    24069 
    24070 > color #6.9/a:2581 teal
    24071 
    24072 > color #6.9/a:2582 royal blue
    24073 
    24074 > color #6.9/a:2583 medium purple
    24075 
    24076 > color #6.9 white target c
    24077 
    24078 > name to_cartoon #6.9/a:2549-2559
    24079 
    24080 > name to_show #6.9/a:1955,2549-2559,2581-2584/Y:73-76
    24081 
    24082 > cartoon to_cartoon
    24083 
    24084 > show to_show
    24085 
    24086 > hide #6.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24087 
    24088 > hbonds to_show restrict to_show color yellow
    24089 
    24090 18 hydrogen bonds found 
    24091 
    24092 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J92_cl9.png height 600 width
    24093 > 600 supersample 3
    24094 
    24095 > hide #!6.9 models
    24096 
    24097 > delete #999
    24098 
    24099 > show #!14.10 models
    24100 
    24101 > hide #14.10
    24102 
    24103 > ~cartoon #14.10
    24104 
    24105 > color #14.10 white
    24106 
    24107 > color #14.10/a:2552 pale violet red
    24108 
    24109 > color #14.10/a:2553 khaki
    24110 
    24111 > color #14.10/a:2554 green yellow
    24112 
    24113 > color #14.10/a:2555 aquamarine
    24114 
    24115 > color #14.10/a:2556 steel blue
    24116 
    24117 > color #14.10/Y orchid
    24118 
    24119 > color #14.10/a:1955 pale green
    24120 
    24121 > color #14.10/a:2581 teal
    24122 
    24123 > color #14.10/a:2582 royal blue
    24124 
    24125 > color #14.10/a:2583 medium purple
    24126 
    24127 > color #14.10 white target c
    24128 
    24129 > name to_cartoon #14.10/a:2549-2559
    24130 
    24131 > name to_show #14.10/a:1955,2549-2559,2581-2584/Y:73-76
    24132 
    24133 > cartoon to_cartoon
    24134 
    24135 > show to_show
    24136 
    24137 > hide #14.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24138 
    24139 > hbonds to_show restrict to_show color yellow
    24140 
    24141 17 hydrogen bonds found 
    24142 
    24143 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J53_c0.png height 600 width
    24144 > 600 supersample 3
    24145 
    24146 > hide #!14.10 models
    24147 
    24148 > delete #999
    24149 
    24150 > show #!14.1 models
    24151 
    24152 > hide #14.1
    24153 
    24154 > ~cartoon #14.1
    24155 
    24156 > color #14.1 white
    24157 
    24158 > color #14.1/a:2552 pale violet red
    24159 
    24160 > color #14.1/a:2553 khaki
    24161 
    24162 > color #14.1/a:2554 green yellow
    24163 
    24164 > color #14.1/a:2555 aquamarine
    24165 
    24166 > color #14.1/a:2556 steel blue
    24167 
    24168 > color #14.1/Y orchid
    24169 
    24170 > color #14.1/a:1955 pale green
    24171 
    24172 > color #14.1/a:2581 teal
    24173 
    24174 > color #14.1/a:2582 royal blue
    24175 
    24176 > color #14.1/a:2583 medium purple
    24177 
    24178 > color #14.1 white target c
    24179 
    24180 > name to_cartoon #14.1/a:2549-2559
    24181 
    24182 > name to_show #14.1/a:1955,2549-2559,2581-2584/Y:73-76
    24183 
    24184 > cartoon to_cartoon
    24185 
    24186 > show to_show
    24187 
    24188 > hide #14.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24189 
    24190 > hbonds to_show restrict to_show color yellow
    24191 
    24192 18 hydrogen bonds found 
    24193 
    24194 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J54_c1.png height 600 width
    24195 > 600 supersample 3
    24196 
    24197 > hide #!14.1 models
    24198 
    24199 > delete #999
    24200 
    24201 > show #!14.2 models
    24202 
    24203 > hide #14.2
    24204 
    24205 > ~cartoon #14.2
    24206 
    24207 > color #14.2 white
    24208 
    24209 > color #14.2/a:2552 pale violet red
    24210 
    24211 > color #14.2/a:2553 khaki
    24212 
    24213 > color #14.2/a:2554 green yellow
    24214 
    24215 > color #14.2/a:2555 aquamarine
    24216 
    24217 > color #14.2/a:2556 steel blue
    24218 
    24219 > color #14.2/Y orchid
    24220 
    24221 > color #14.2/a:1955 pale green
    24222 
    24223 > color #14.2/a:2581 teal
    24224 
    24225 > color #14.2/a:2582 royal blue
    24226 
    24227 > color #14.2/a:2583 medium purple
    24228 
    24229 > color #14.2 white target c
    24230 
    24231 > name to_cartoon #14.2/a:2549-2559
    24232 
    24233 > name to_show #14.2/a:1955,2549-2559,2581-2584/Y:73-76
    24234 
    24235 > cartoon to_cartoon
    24236 
    24237 > show to_show
    24238 
    24239 > hide #14.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24240 
    24241 > hbonds to_show restrict to_show color yellow
    24242 
    24243 18 hydrogen bonds found 
    24244 
    24245 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J55_c2.png height 600 width
    24246 > 600 supersample 3
    24247 
    24248 > hide #!14.2 models
    24249 
    24250 > delete #999
    24251 
    24252 > show #!14.3 models
    24253 
    24254 > hide #14.3
    24255 
    24256 > ~cartoon #14.3
    24257 
    24258 > color #14.3 white
    24259 
    24260 > color #14.3/a:2552 pale violet red
    24261 
    24262 > color #14.3/a:2553 khaki
    24263 
    24264 > color #14.3/a:2554 green yellow
    24265 
    24266 > color #14.3/a:2555 aquamarine
    24267 
    24268 > color #14.3/a:2556 steel blue
    24269 
    24270 > color #14.3/Y orchid
    24271 
    24272 > color #14.3/a:1955 pale green
    24273 
    24274 > color #14.3/a:2581 teal
    24275 
    24276 > color #14.3/a:2582 royal blue
    24277 
    24278 > color #14.3/a:2583 medium purple
    24279 
    24280 > color #14.3 white target c
    24281 
    24282 > name to_cartoon #14.3/a:2549-2559
    24283 
    24284 > name to_show #14.3/a:1955,2549-2559,2581-2584/Y:73-76
    24285 
    24286 > cartoon to_cartoon
    24287 
    24288 > show to_show
    24289 
    24290 > hide #14.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24291 
    24292 > hbonds to_show restrict to_show color yellow
    24293 
    24294 24 hydrogen bonds found 
    24295 
    24296 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J56_c3.png height 600 width
    24297 > 600 supersample 3
    24298 
    24299 > hide #!14.3 models
    24300 
    24301 > delete #999
    24302 
    24303 > show #!14.4 models
    24304 
    24305 > hide #14.4
    24306 
    24307 > ~cartoon #14.4
    24308 
    24309 > color #14.4 white
    24310 
    24311 > color #14.4/a:2552 pale violet red
    24312 
    24313 > color #14.4/a:2553 khaki
    24314 
    24315 > color #14.4/a:2554 green yellow
    24316 
    24317 > color #14.4/a:2555 aquamarine
    24318 
    24319 > color #14.4/a:2556 steel blue
    24320 
    24321 > color #14.4/Y orchid
    24322 
    24323 > color #14.4/a:1955 pale green
    24324 
    24325 > color #14.4/a:2581 teal
    24326 
    24327 > color #14.4/a:2582 royal blue
    24328 
    24329 > color #14.4/a:2583 medium purple
    24330 
    24331 > color #14.4 white target c
    24332 
    24333 > name to_cartoon #14.4/a:2549-2559
    24334 
    24335 > name to_show #14.4/a:1955,2549-2559,2581-2584/Y:73-76
    24336 
    24337 > cartoon to_cartoon
    24338 
    24339 > show to_show
    24340 
    24341 > hide #14.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24342 
    24343 > hbonds to_show restrict to_show color yellow
    24344 
    24345 17 hydrogen bonds found 
    24346 
    24347 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J57_c4.png height 600 width
    24348 > 600 supersample 3
    24349 
    24350 > hide #!14.4 models
    24351 
    24352 > delete #999
    24353 
    24354 > show #!14.5 models
    24355 
    24356 > hide #14.5
    24357 
    24358 > ~cartoon #14.5
    24359 
    24360 > color #14.5 white
    24361 
    24362 > color #14.5/a:2552 pale violet red
    24363 
    24364 > color #14.5/a:2553 khaki
    24365 
    24366 > color #14.5/a:2554 green yellow
    24367 
    24368 > color #14.5/a:2555 aquamarine
    24369 
    24370 > color #14.5/a:2556 steel blue
    24371 
    24372 > color #14.5/Y orchid
    24373 
    24374 > color #14.5/a:1955 pale green
    24375 
    24376 > color #14.5/a:2581 teal
    24377 
    24378 > color #14.5/a:2582 royal blue
    24379 
    24380 > color #14.5/a:2583 medium purple
    24381 
    24382 > color #14.5 white target c
    24383 
    24384 > name to_cartoon #14.5/a:2549-2559
    24385 
    24386 > name to_show #14.5/a:1955,2549-2559,2581-2584/Y:73-76
    24387 
    24388 > cartoon to_cartoon
    24389 
    24390 > show to_show
    24391 
    24392 > hide #14.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24393 
    24394 > hbonds to_show restrict to_show color yellow
    24395 
    24396 16 hydrogen bonds found 
    24397 
    24398 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J58_c5.png height 600 width
    24399 > 600 supersample 3
    24400 
    24401 > hide #!14.5 models
    24402 
    24403 > delete #999
    24404 
    24405 > show #!14.6 models
    24406 
    24407 > hide #14.6
    24408 
    24409 > ~cartoon #14.6
    24410 
    24411 > color #14.6 white
    24412 
    24413 > color #14.6/a:2552 pale violet red
    24414 
    24415 > color #14.6/a:2553 khaki
    24416 
    24417 > color #14.6/a:2554 green yellow
    24418 
    24419 > color #14.6/a:2555 aquamarine
    24420 
    24421 > color #14.6/a:2556 steel blue
    24422 
    24423 > color #14.6/Y orchid
    24424 
    24425 > color #14.6/a:1955 pale green
    24426 
    24427 > color #14.6/a:2581 teal
    24428 
    24429 > color #14.6/a:2582 royal blue
    24430 
    24431 > color #14.6/a:2583 medium purple
    24432 
    24433 > color #14.6 white target c
    24434 
    24435 > name to_cartoon #14.6/a:2549-2559
    24436 
    24437 > name to_show #14.6/a:1955,2549-2559,2581-2584/Y:73-76
    24438 
    24439 > cartoon to_cartoon
    24440 
    24441 > show to_show
    24442 
    24443 > hide #14.6/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24444 
    24445 > hbonds to_show restrict to_show color yellow
    24446 
    24447 20 hydrogen bonds found 
    24448 
    24449 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J59_c6.png height 600 width
    24450 > 600 supersample 3
    24451 
    24452 > hide #!14.6 models
    24453 
    24454 > delete #999
    24455 
    24456 > show #!14.7 models
    24457 
    24458 > hide #14.7
    24459 
    24460 > ~cartoon #14.7
    24461 
    24462 > color #14.7 white
    24463 
    24464 > color #14.7/a:2552 pale violet red
    24465 
    24466 > color #14.7/a:2553 khaki
    24467 
    24468 > color #14.7/a:2554 green yellow
    24469 
    24470 > color #14.7/a:2555 aquamarine
    24471 
    24472 > color #14.7/a:2556 steel blue
    24473 
    24474 > color #14.7/Y orchid
    24475 
    24476 > color #14.7/a:1955 pale green
    24477 
    24478 > color #14.7/a:2581 teal
    24479 
    24480 > color #14.7/a:2582 royal blue
    24481 
    24482 > color #14.7/a:2583 medium purple
    24483 
    24484 > color #14.7 white target c
    24485 
    24486 > name to_cartoon #14.7/a:2549-2559
    24487 
    24488 > name to_show #14.7/a:1955,2549-2559,2581-2584/Y:73-76
    24489 
    24490 > cartoon to_cartoon
    24491 
    24492 > show to_show
    24493 
    24494 > hide #14.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24495 
    24496 > hbonds to_show restrict to_show color yellow
    24497 
    24498 22 hydrogen bonds found 
    24499 
    24500 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J60_c7.png height 600 width
    24501 > 600 supersample 3
    24502 
    24503 > hide #!14.7 models
    24504 
    24505 > delete #999
    24506 
    24507 > show #!14.8 models
    24508 
    24509 > hide #14.8
    24510 
    24511 > ~cartoon #14.8
    24512 
    24513 > color #14.8 white
    24514 
    24515 > color #14.8/a:2552 pale violet red
    24516 
    24517 > color #14.8/a:2553 khaki
    24518 
    24519 > color #14.8/a:2554 green yellow
    24520 
    24521 > color #14.8/a:2555 aquamarine
    24522 
    24523 > color #14.8/a:2556 steel blue
    24524 
    24525 > color #14.8/Y orchid
    24526 
    24527 > color #14.8/a:1955 pale green
    24528 
    24529 > color #14.8/a:2581 teal
    24530 
    24531 > color #14.8/a:2582 royal blue
    24532 
    24533 > color #14.8/a:2583 medium purple
    24534 
    24535 > color #14.8 white target c
    24536 
    24537 > name to_cartoon #14.8/a:2549-2559
    24538 
    24539 > name to_show #14.8/a:1955,2549-2559,2581-2584/Y:73-76
    24540 
    24541 > cartoon to_cartoon
    24542 
    24543 > show to_show
    24544 
    24545 > hide #14.8/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24546 
    24547 > hbonds to_show restrict to_show color yellow
    24548 
    24549 21 hydrogen bonds found 
    24550 
    24551 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J61_c8.png height 600 width
    24552 > 600 supersample 3
    24553 
    24554 > hide #!14.8 models
    24555 
    24556 > delete #999
    24557 
    24558 > show #!14.9 models
    24559 
    24560 > hide #14.9
    24561 
    24562 > ~cartoon #14.9
    24563 
    24564 > color #14.9 white
    24565 
    24566 > color #14.9/a:2552 pale violet red
    24567 
    24568 > color #14.9/a:2553 khaki
    24569 
    24570 > color #14.9/a:2554 green yellow
    24571 
    24572 > color #14.9/a:2555 aquamarine
    24573 
    24574 > color #14.9/a:2556 steel blue
    24575 
    24576 > color #14.9/Y orchid
    24577 
    24578 > color #14.9/a:1955 pale green
    24579 
    24580 > color #14.9/a:2581 teal
    24581 
    24582 > color #14.9/a:2582 royal blue
    24583 
    24584 > color #14.9/a:2583 medium purple
    24585 
    24586 > color #14.9 white target c
    24587 
    24588 > name to_cartoon #14.9/a:2549-2559
    24589 
    24590 > name to_show #14.9/a:1955,2549-2559,2581-2584/Y:73-76
    24591 
    24592 > cartoon to_cartoon
    24593 
    24594 > show to_show
    24595 
    24596 > hide #14.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24597 
    24598 > hbonds to_show restrict to_show color yellow
    24599 
    24600 27 hydrogen bonds found 
    24601 
    24602 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J62_c9.png height 600 width
    24603 > 600 supersample 3
    24604 
    24605 > hide #!14.9 models
    24606 
    24607 > delete #999
    24608 
    24609 > show #!22.1 models
    24610 
    24611 > hide #22.1
    24612 
    24613 > ~cartoon #22.1
    24614 
    24615 > color #22.1 white
    24616 
    24617 > color #22.1/a:2552 pale violet red
    24618 
    24619 > color #22.1/a:2553 khaki
    24620 
    24621 > color #22.1/a:2554 green yellow
    24622 
    24623 > color #22.1/a:2555 aquamarine
    24624 
    24625 > color #22.1/a:2556 steel blue
    24626 
    24627 > color #22.1/Y orchid
    24628 
    24629 > color #22.1/a:1955 pale green
    24630 
    24631 > color #22.1/a:2581 teal
    24632 
    24633 > color #22.1/a:2582 royal blue
    24634 
    24635 > color #22.1/a:2583 medium purple
    24636 
    24637 > color #22.1 white target c
    24638 
    24639 > name to_cartoon #22.1/a:2549-2559
    24640 
    24641 > name to_show #22.1/a:1955,2549-2559,2581-2584/Y:73-76
    24642 
    24643 > cartoon to_cartoon
    24644 
    24645 > show to_show
    24646 
    24647 > hide #22.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24648 
    24649 > hbonds to_show restrict to_show color yellow
    24650 
    24651 24 hydrogen bonds found 
    24652 
    24653 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J111_ape.png height 600 width
    24654 > 600 supersample 3
    24655 
    24656 > hide #!22.1 models
    24657 
    24658 > delete #999
    24659 
    24660 > show #!22.2 models
    24661 
    24662 > hide #22.2
    24663 
    24664 > ~cartoon #22.2
    24665 
    24666 > color #22.2 white
    24667 
    24668 > color #22.2/a:2552 pale violet red
    24669 
    24670 > color #22.2/a:2553 khaki
    24671 
    24672 > color #22.2/a:2554 green yellow
    24673 
    24674 > color #22.2/a:2555 aquamarine
    24675 
    24676 > color #22.2/a:2556 steel blue
    24677 
    24678 > color #22.2/Y orchid
    24679 
    24680 > color #22.2/a:1955 pale green
    24681 
    24682 > color #22.2/a:2581 teal
    24683 
    24684 > color #22.2/a:2582 royal blue
    24685 
    24686 > color #22.2/a:2583 medium purple
    24687 
    24688 > color #22.2 white target c
    24689 
    24690 > name to_cartoon #22.2/a:2549-2559
    24691 
    24692 > name to_show #22.2/a:1955,2549-2559,2581-2584/Y:73-76
    24693 
    24694 > cartoon to_cartoon
    24695 
    24696 > show to_show
    24697 
    24698 > hide #22.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24699 
    24700 > hbonds to_show restrict to_show color yellow
    24701 
    24702 25 hydrogen bonds found 
    24703 
    24704 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J112_ap.png height 600 width
    24705 > 600 supersample 3
    24706 
    24707 > hide #!22.2 models
    24708 
    24709 > delete #999
    24710 
    24711 > show #!22.3 models
    24712 
    24713 > hide #22.3
    24714 
    24715 > ~cartoon #22.3
    24716 
    24717 > color #22.3 white
    24718 
    24719 > color #22.3/a:2552 pale violet red
    24720 
    24721 > color #22.3/a:2553 khaki
    24722 
    24723 > color #22.3/a:2554 green yellow
    24724 
    24725 > color #22.3/a:2555 aquamarine
    24726 
    24727 > color #22.3/a:2556 steel blue
    24728 
    24729 > color #22.3/Y orchid
    24730 
    24731 > color #22.3/a:1955 pale green
    24732 
    24733 > color #22.3/a:2581 teal
    24734 
    24735 > color #22.3/a:2582 royal blue
    24736 
    24737 > color #22.3/a:2583 medium purple
    24738 
    24739 > color #22.3 white target c
    24740 
    24741 > name to_cartoon #22.3/a:2549-2559
    24742 
    24743 > name to_show #22.3/a:1955,2549-2559,2581-2584/Y:73-76
    24744 
    24745 > cartoon to_cartoon
    24746 
    24747 > show to_show
    24748 
    24749 > hide #22.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24750 
    24751 > hbonds to_show restrict to_show color yellow
    24752 
    24753 16 hydrogen bonds found 
    24754 
    24755 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J113_pe.png height 600 width
    24756 > 600 supersample 3
    24757 
    24758 > hide #!22.3 models
    24759 
    24760 > delete #999
    24761 
    24762 > show #!22.4 models
    24763 
    24764 > hide #22.4
    24765 
    24766 > ~cartoon #22.4
    24767 
    24768 > color #22.4 white
    24769 
    24770 > color #22.4/a:2552 pale violet red
    24771 
    24772 > color #22.4/a:2553 khaki
    24773 
    24774 > color #22.4/a:2554 green yellow
    24775 
    24776 > color #22.4/a:2555 aquamarine
    24777 
    24778 > color #22.4/a:2556 steel blue
    24779 
    24780 > color #22.4/Y orchid
    24781 
    24782 > color #22.4/a:1955 pale green
    24783 
    24784 > color #22.4/a:2581 teal
    24785 
    24786 > color #22.4/a:2582 royal blue
    24787 
    24788 > color #22.4/a:2583 medium purple
    24789 
    24790 > color #22.4 white target c
    24791 
    24792 > name to_cartoon #22.4/a:2549-2559
    24793 
    24794 > name to_show #22.4/a:1955,2549-2559,2581-2584/Y:73-76
    24795 
    24796 > cartoon to_cartoon
    24797 
    24798 > show to_show
    24799 
    24800 > hide #22.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24801 
    24802 > hbonds to_show restrict to_show color yellow
    24803 
    24804 18 hydrogen bonds found 
    24805 
    24806 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J124_e.png height 600 width
    24807 > 600 supersample 3
    24808 
    24809 > hide #!22.4 models
    24810 
    24811 > delete #999
    24812 
    24813 > graphics quality 1
    24814 
    24815 > show #!1.2 models
    24816 
    24817 > show #!1.11 models
    24818 
    24819 > hide #!1.11 models
    24820 
    24821 > hide #!1.2 models
    24822 
    24823 > show #!1.11 models
    24824 
    24825 > show #!1.11 atoms
    24826 
    24827 > windowsize 600 600
    24828 
    24829 > lighting simple
    24830 
    24831 > graphics silhouettes true
    24832 
    24833 > hide #!1.11 models
    24834 
    24835 > show #!1.11 models
    24836 
    24837 > hide #1.11
    24838 
    24839 > ~cartoon #1.11
    24840 
    24841 > color #1.11 white
    24842 
    24843 > color #1.11/BA:2552 pale violet red
    24844 
    24845 > color #1.11/BA:2553 khaki
    24846 
    24847 > color #1.11/BA:2554 green yellow
    24848 
    24849 > color #1.11/BA:2555 aquamarine
    24850 
    24851 > color #1.11/BA:2556 steel blue
    24852 
    24853 > color #1.11/Y orchid
    24854 
    24855 > color #1.11/BA:1955 pale green
    24856 
    24857 > color #1.11/BA:2581 teal
    24858 
    24859 > color #1.11/BA:2582 royal blue
    24860 
    24861 > color #1.11/BA:2583 medium purple
    24862 
    24863 > color #1.11 white target c
    24864 
    24865 > name to_cartoon #1.11/BA:2549-2559
    24866 
    24867 > name to_show #1.11/BA:1955,2549-2559,2581-2584/Y:73-76
    24868 
    24869 > cartoon to_cartoon
    24870 
    24871 > show to_show
    24872 
    24873 > hide #1.11/BA:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24874 
    24875 > hbonds to_show restrict to_show color yellow
    24876 
    24877 17 hydrogen bonds found 
    24878 
    24879 > save /Users/dalar193/Desktop/A_loop/A_loop_7o1a.png height 600 width 600
    24880 > supersample 3
    24881 
    24882 > hide #!1.11 models
    24883 
    24884 > show #!1.2 models
    24885 
    24886 > show #!1.11 models
    24887 
    24888 > view A_loop
    24889 
    24890 > hide #!1.2 models
    24891 
    24892 > hide #!1.11 models
    24893 
    24894 > show #!1.11 models
    24895 
    24896 > hide #1.11
    24897 
    24898 > ~cartoon #1.11
    24899 
    24900 > color #1.11 white
    24901 
    24902 > color #1.11/BA:2552 pale violet red
    24903 
    24904 > color #1.11/BA:2553 khaki
    24905 
    24906 > color #1.11/BA:2554 green yellow
    24907 
    24908 > color #1.11/BA:2555 aquamarine
    24909 
    24910 > color #1.11/BA:2556 steel blue
    24911 
    24912 > color #1.11/Y orchid
    24913 
    24914 > color #1.11/BA:1955 pale green
    24915 
    24916 > color #1.11/BA:2581 teal
    24917 
    24918 > color #1.11/BA:2582 royal blue
    24919 
    24920 > color #1.11/BA:2583 medium purple
    24921 
    24922 > color #1.11 white target c
    24923 
    24924 > name to_cartoon #1.11/BA:2549-2559
    24925 
    24926 > name to_show #1.11/BA:1955,2549-2559,2581-2584/Y:73-76
    24927 
    24928 > cartoon to_cartoon
    24929 
    24930 > show to_show
    24931 
    24932 > hide #1.11/BA:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24933 
    24934 > hbonds to_show restrict to_show color yellow
    24935 
    24936 17 hydrogen bonds found 
    24937 
    24938 > save /Users/dalar193/Desktop/A_loop/A_loop_7o1a.png height 600 width 600
    24939 > supersample 3
    24940 
    24941 > hide #!1.11 models
    24942 
    24943 > show #!1.9 models
    24944 
    24945 > show #!1.9 atoms
    24946 
    24947 > view A_loop
    24948 
    24949 > hide #!1.9 models
    24950 
    24951 > show #!1.9 models
    24952 
    24953 > hide #1.9
    24954 
    24955 > ~cartoon #1.9
    24956 
    24957 > color #1.9 white
    24958 
    24959 > color #1.9/A:2552 pale violet red
    24960 
    24961 > color #1.9/A:2553 khaki
    24962 
    24963 > color #1.9/A:2554 green yellow
    24964 
    24965 > color #1.9/A:2555 aquamarine
    24966 
    24967 > color #1.9/A:2556 steel blue
    24968 
    24969 > color #1.9/Y orchid
    24970 
    24971 > color #1.9/A:1955 pale green
    24972 
    24973 > color #1.9/A:2581 teal
    24974 
    24975 > color #1.9/A:2582 royal blue
    24976 
    24977 > color #1.9/A:2583 medium purple
    24978 
    24979 > color #1.9 white target c
    24980 
    24981 > name to_cartoon #1.9/A:2549-2559
    24982 
    24983 > name to_show #1.9/A:1955,2549-2559,2581-2584/Y:73-76
    24984 
    24985 > cartoon to_cartoon
    24986 
    24987 > show to_show
    24988 
    24989 > hide #1.9/A:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    24990 
    24991 > hbonds to_show restrict to_show color yellow
    24992 
    24993 25 hydrogen bonds found 
    24994 
    24995 > save /Users/dalar193/Desktop/A_loop/A_loop_7bv8.png height 600 width 600
    24996 > supersample 3
    24997 
    24998 > hide #!1.9 models
    24999 
    25000 > show #!1.11 models
    25001 
    25002 > hide #1.11
    25003 
    25004 > ~cartoon #1.11
    25005 
    25006 > color #1.11 white
    25007 
    25008 > color #1.11/BA:2552 pale violet red
    25009 
    25010 > color #1.11/BA:2553 khaki
    25011 
    25012 > color #1.11/BA:2554 green yellow
    25013 
    25014 > color #1.11/BA:2555 aquamarine
    25015 
    25016 > color #1.11/BA:2556 steel blue
    25017 
    25018 > color #1.11/Y orchid
    25019 
    25020 > color #1.11/BA:1955 pale green
    25021 
    25022 > color #1.11/BA:2581 teal
    25023 
    25024 > color #1.11/BA:2582 royal blue
    25025 
    25026 > color #1.11/BA:2583 medium purple
    25027 
    25028 > color #1.11 white target c
    25029 
    25030 > name to_cartoon #1.11/BA:2549-2559
    25031 
    25032 > name to_show #1.11/BA:1955,2549-2559,2581-2584/Y:73-76
    25033 
    25034 > cartoon to_cartoon
    25035 
    25036 > show to_show
    25037 
    25038 > hide #1.11/BA:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25039 
    25040 > hbonds to_show restrict to_show color yellow
    25041 
    25042 17 hydrogen bonds found 
    25043 
    25044 > save /Users/dalar193/Desktop/A_loop/A_loop_7o1a.png height 600 width 600
    25045 > supersample 3
    25046 
    25047 > hide #!1.11 models
    25048 
    25049 > graphics quality 6
    25050 
    25051 > show #!1.2 models
    25052 
    25053 > hide #1.2
    25054 
    25055 > ~cartoon #1.2
    25056 
    25057 > color #1.2 white
    25058 
    25059 > color #1.2/a:2552 pale violet red
    25060 
    25061 > color #1.2/a:2553 khaki
    25062 
    25063 > color #1.2/a:2554 green yellow
    25064 
    25065 > color #1.2/a:2555 aquamarine
    25066 
    25067 > color #1.2/a:2556 steel blue
    25068 
    25069 > color #1.2/Y orchid
    25070 
    25071 > color #1.2/a:1955 pale green
    25072 
    25073 > color #1.2/a:2581 teal
    25074 
    25075 > color #1.2/a:2582 royal blue
    25076 
    25077 > color #1.2/a:2583 medium purple
    25078 
    25079 > color #1.2 white target c
    25080 
    25081 > name to_cartoon #1.2/a:2549-2559
    25082 
    25083 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    25084 
    25085 > cartoon to_cartoon
    25086 
    25087 > show to_show
    25088 
    25089 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25090 
    25091 > hbonds to_show restrict to_show color yellow
    25092 
    25093 24 hydrogen bonds found 
    25094 
    25095 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    25096 > supersample 3
    25097 
    25098 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    25099 
    25100 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 200 width 200
    25101 > supersample 3
    25102 
    25103 > hide #!1.2 models
    25104 
    25105 > show #!1.7 models
    25106 
    25107 > hide #1.7
    25108 
    25109 > ~cartoon #1.7
    25110 
    25111 > color #1.7 white
    25112 
    25113 > color #1.7/a:2552 pale violet red
    25114 
    25115 > color #1.7/a:2553 khaki
    25116 
    25117 > color #1.7/a:2554 green yellow
    25118 
    25119 > color #1.7/a:2555 aquamarine
    25120 
    25121 > color #1.7/a:2556 steel blue
    25122 
    25123 > color #1.7/Y orchid
    25124 
    25125 > color #1.7/a:1955 pale green
    25126 
    25127 > color #1.7/a:2581 teal
    25128 
    25129 > color #1.7/a:2582 royal blue
    25130 
    25131 > color #1.7/a:2583 medium purple
    25132 
    25133 > color #1.7 white target c
    25134 
    25135 > name to_cartoon #1.7/a:2549-2559
    25136 
    25137 > name to_show #1.7/a:1955,2549-2559,2581-2584/Y:73-76
    25138 
    25139 > cartoon to_cartoon
    25140 
    25141 > show to_show
    25142 
    25143 > hide #1.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25144 
    25145 > hbonds to_show restrict to_show color yellow
    25146 
    25147 16 hydrogen bonds found 
    25148 
    25149 > save /Users/dalar193/Desktop/A_loop/A_loop_8cgk.png height 600 width 600
    25150 > supersample 3
    25151 
    25152 > hide #!1.7 models
    25153 
    25154 > show #!1.9 models
    25155 
    25156 > hide #1.9
    25157 
    25158 > ~cartoon #1.9
    25159 
    25160 > color #1.9 white
    25161 
    25162 > color #1.9/A:2552 pale violet red
    25163 
    25164 > color #1.9/A:2553 khaki
    25165 
    25166 > color #1.9/A:2554 green yellow
    25167 
    25168 > color #1.9/A:2555 aquamarine
    25169 
    25170 > color #1.9/A:2556 steel blue
    25171 
    25172 > color #1.9/Y orchid
    25173 
    25174 > color #1.9/A:1955 pale green
    25175 
    25176 > color #1.9/A:2581 teal
    25177 
    25178 > color #1.9/A:2582 royal blue
    25179 
    25180 > color #1.9/A:2583 medium purple
    25181 
    25182 > color #1.9 white target c
    25183 
    25184 > name to_cartoon #1.9/A:2549-2559
    25185 
    25186 > name to_show #1.9/A:1955,2549-2559,2581-2584/Y:73-76
    25187 
    25188 > cartoon to_cartoon
    25189 
    25190 > show to_show
    25191 
    25192 > hide #1.9/A:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25193 
    25194 > hbonds to_show restrict to_show color yellow
    25195 
    25196 25 hydrogen bonds found 
    25197 
    25198 > save /Users/dalar193/Desktop/A_loop/A_loop_7bv8.png height 600 width 600
    25199 > supersample 3
    25200 
    25201 > hide #!1.9 models
    25202 
    25203 > show #!1.11 models
    25204 
    25205 > hide #1.11
    25206 
    25207 > ~cartoon #1.11
    25208 
    25209 > color #1.11 white
    25210 
    25211 > color #1.11/BA:2552 pale violet red
    25212 
    25213 > color #1.11/BA:2553 khaki
    25214 
    25215 > color #1.11/BA:2554 green yellow
    25216 
    25217 > color #1.11/BA:2555 aquamarine
    25218 
    25219 > color #1.11/BA:2556 steel blue
    25220 
    25221 > color #1.11/Y orchid
    25222 
    25223 > color #1.11/BA:1955 pale green
    25224 
    25225 > color #1.11/BA:2581 teal
    25226 
    25227 > color #1.11/BA:2582 royal blue
    25228 
    25229 > color #1.11/BA:2583 medium purple
    25230 
    25231 > color #1.11 white target c
    25232 
    25233 > name to_cartoon #1.11/BA:2549-2559
    25234 
    25235 > name to_show #1.11/BA:1955,2549-2559,2581-2584/Y:73-76
    25236 
    25237 > cartoon to_cartoon
    25238 
    25239 > show to_show
    25240 
    25241 > hide #1.11/BA:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25242 
    25243 > hbonds to_show restrict to_show color yellow
    25244 
    25245 17 hydrogen bonds found 
    25246 
    25247 > save /Users/dalar193/Desktop/A_loop/A_loop_7o1a.png height 600 width 600
    25248 > supersample 3
    25249 
    25250 > hide #!1.11 models
    25251 
    25252 > show #!6.10 models
    25253 
    25254 > hide #6.10
    25255 
    25256 > ~cartoon #6.10
    25257 
    25258 > color #6.10 white
    25259 
    25260 > color #6.10/a:2552 pale violet red
    25261 
    25262 > color #6.10/a:2553 khaki
    25263 
    25264 > color #6.10/a:2554 green yellow
    25265 
    25266 > color #6.10/a:2555 aquamarine
    25267 
    25268 > color #6.10/a:2556 steel blue
    25269 
    25270 > color #6.10/Y orchid
    25271 
    25272 > color #6.10/a:1955 pale green
    25273 
    25274 > color #6.10/a:2581 teal
    25275 
    25276 > color #6.10/a:2582 royal blue
    25277 
    25278 > color #6.10/a:2583 medium purple
    25279 
    25280 > color #6.10 white target c
    25281 
    25282 > name to_cartoon #6.10/a:2549-2559
    25283 
    25284 > name to_show #6.10/a:1955,2549-2559,2581-2584/Y:73-76
    25285 
    25286 > cartoon to_cartoon
    25287 
    25288 > show to_show
    25289 
    25290 > hide #6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25291 
    25292 > hbonds to_show restrict to_show color yellow
    25293 
    25294 16 hydrogen bonds found 
    25295 
    25296 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J83_cl0.png height 600 width
    25297 > 600 supersample 3
    25298 
    25299 > hide #!6.10 models
    25300 
    25301 > show #!6.1 models
    25302 
    25303 > hide #6.1
    25304 
    25305 > ~cartoon #6.1
    25306 
    25307 > color #6.1 white
    25308 
    25309 > color #6.1/a:2552 pale violet red
    25310 
    25311 > color #6.1/a:2553 khaki
    25312 
    25313 > color #6.1/a:2554 green yellow
    25314 
    25315 > color #6.1/a:2555 aquamarine
    25316 
    25317 > color #6.1/a:2556 steel blue
    25318 
    25319 > color #6.1/Y orchid
    25320 
    25321 > color #6.1/a:1955 pale green
    25322 
    25323 > color #6.1/a:2581 teal
    25324 
    25325 > color #6.1/a:2582 royal blue
    25326 
    25327 > color #6.1/a:2583 medium purple
    25328 
    25329 > color #6.1 white target c
    25330 
    25331 > name to_cartoon #6.1/a:2549-2559
    25332 
    25333 > name to_show #6.1/a:1955,2549-2559,2581-2584/Y:73-76
    25334 
    25335 > cartoon to_cartoon
    25336 
    25337 > show to_show
    25338 
    25339 > hide #6.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25340 
    25341 > hbonds to_show restrict to_show color yellow
    25342 
    25343 19 hydrogen bonds found 
    25344 
    25345 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J84_cl1.png height 600 width
    25346 > 600 supersample 3
    25347 
    25348 > hide #!6.1 models
    25349 
    25350 > show #!6.2 models
    25351 
    25352 > hide #6.2
    25353 
    25354 > ~cartoon #6.2
    25355 
    25356 > color #6.2 white
    25357 
    25358 > color #6.2/a:2552 pale violet red
    25359 
    25360 > color #6.2/a:2553 khaki
    25361 
    25362 > color #6.2/a:2554 green yellow
    25363 
    25364 > color #6.2/a:2555 aquamarine
    25365 
    25366 > color #6.2/a:2556 steel blue
    25367 
    25368 > color #6.2/Y orchid
    25369 
    25370 > color #6.2/a:1955 pale green
    25371 
    25372 > color #6.2/a:2581 teal
    25373 
    25374 > color #6.2/a:2582 royal blue
    25375 
    25376 > color #6.2/a:2583 medium purple
    25377 
    25378 > color #6.2 white target c
    25379 
    25380 > name to_cartoon #6.2/a:2549-2559
    25381 
    25382 > name to_show #6.2/a:1955,2549-2559,2581-2584/Y:73-76
    25383 
    25384 > cartoon to_cartoon
    25385 
    25386 > show to_show
    25387 
    25388 > hide #6.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25389 
    25390 > hbonds to_show restrict to_show color yellow
    25391 
    25392 23 hydrogen bonds found 
    25393 
    25394 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J85_cl2.png height 600 width
    25395 > 600 supersample 3
    25396 
    25397 > hide #!6.2 models
    25398 
    25399 > show #!6.3 models
    25400 
    25401 > hide #6.3
    25402 
    25403 > ~cartoon #6.3
    25404 
    25405 > color #6.3 white
    25406 
    25407 > color #6.3/a:2552 pale violet red
    25408 
    25409 > color #6.3/a:2553 khaki
    25410 
    25411 > color #6.3/a:2554 green yellow
    25412 
    25413 > color #6.3/a:2555 aquamarine
    25414 
    25415 > color #6.3/a:2556 steel blue
    25416 
    25417 > color #6.3/Y orchid
    25418 
    25419 > color #6.3/a:1955 pale green
    25420 
    25421 > color #6.3/a:2581 teal
    25422 
    25423 > color #6.3/a:2582 royal blue
    25424 
    25425 > color #6.3/a:2583 medium purple
    25426 
    25427 > color #6.3 white target c
    25428 
    25429 > name to_cartoon #6.3/a:2549-2559
    25430 
    25431 > name to_show #6.3/a:1955,2549-2559,2581-2584/Y:73-76
    25432 
    25433 > cartoon to_cartoon
    25434 
    25435 > show to_show
    25436 
    25437 > hide #6.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25438 
    25439 > hbonds to_show restrict to_show color yellow
    25440 
    25441 16 hydrogen bonds found 
    25442 
    25443 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J86_cl3.png height 600 width
    25444 > 600 supersample 3
    25445 
    25446 > hide #!6.3 models
    25447 
    25448 > show #!6.4 models
    25449 
    25450 > hide #6.4
    25451 
    25452 > ~cartoon #6.4
    25453 
    25454 > color #6.4 white
    25455 
    25456 > color #6.4/a:2552 pale violet red
    25457 
    25458 > color #6.4/a:2553 khaki
    25459 
    25460 > color #6.4/a:2554 green yellow
    25461 
    25462 > color #6.4/a:2555 aquamarine
    25463 
    25464 > color #6.4/a:2556 steel blue
    25465 
    25466 > color #6.4/Y orchid
    25467 
    25468 > color #6.4/a:1955 pale green
    25469 
    25470 > color #6.4/a:2581 teal
    25471 
    25472 > color #6.4/a:2582 royal blue
    25473 
    25474 > color #6.4/a:2583 medium purple
    25475 
    25476 > color #6.4 white target c
    25477 
    25478 > name to_cartoon #6.4/a:2549-2559
    25479 
    25480 > name to_show #6.4/a:1955,2549-2559,2581-2584/Y:73-76
    25481 
    25482 > cartoon to_cartoon
    25483 
    25484 > show to_show
    25485 
    25486 > hide #6.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25487 
    25488 > hbonds to_show restrict to_show color yellow
    25489 
    25490 22 hydrogen bonds found 
    25491 
    25492 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J87_cl4.png height 600 width
    25493 > 600 supersample 3
    25494 
    25495 > hide #!6.4 models
    25496 
    25497 > show #!6.5 models
    25498 
    25499 > hide #6.5
    25500 
    25501 > ~cartoon #6.5
    25502 
    25503 > color #6.5 white
    25504 
    25505 > color #6.5/a:2552 pale violet red
    25506 
    25507 > color #6.5/a:2553 khaki
    25508 
    25509 > color #6.5/a:2554 green yellow
    25510 
    25511 > color #6.5/a:2555 aquamarine
    25512 
    25513 > color #6.5/a:2556 steel blue
    25514 
    25515 > color #6.5/Y orchid
    25516 
    25517 > color #6.5/a:1955 pale green
    25518 
    25519 > color #6.5/a:2581 teal
    25520 
    25521 > color #6.5/a:2582 royal blue
    25522 
    25523 > color #6.5/a:2583 medium purple
    25524 
    25525 > color #6.5 white target c
    25526 
    25527 > name to_cartoon #6.5/a:2549-2559
    25528 
    25529 > name to_show #6.5/a:1955,2549-2559,2581-2584/Y:73-76
    25530 
    25531 > cartoon to_cartoon
    25532 
    25533 > show to_show
    25534 
    25535 > hide #6.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25536 
    25537 > hbonds to_show restrict to_show color yellow
    25538 
    25539 16 hydrogen bonds found 
    25540 
    25541 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J88_cl5.png height 600 width
    25542 > 600 supersample 3
    25543 
    25544 > hide #!6.5 models
    25545 
    25546 > show #!6.6 models
    25547 
    25548 > hide #6.6
    25549 
    25550 > ~cartoon #6.6
    25551 
    25552 > color #6.6 white
    25553 
    25554 > color #6.6/a:2552 pale violet red
    25555 
    25556 > color #6.6/a:2553 khaki
    25557 
    25558 > color #6.6/a:2554 green yellow
    25559 
    25560 > color #6.6/a:2555 aquamarine
    25561 
    25562 > color #6.6/a:2556 steel blue
    25563 
    25564 > color #6.6/Y orchid
    25565 
    25566 > color #6.6/a:1955 pale green
    25567 
    25568 > color #6.6/a:2581 teal
    25569 
    25570 > color #6.6/a:2582 royal blue
    25571 
    25572 > color #6.6/a:2583 medium purple
    25573 
    25574 > color #6.6 white target c
    25575 
    25576 > name to_cartoon #6.6/a:2549-2559
    25577 
    25578 > name to_show #6.6/a:1955,2549-2559,2581-2584/Y:73-76
    25579 
    25580 > cartoon to_cartoon
    25581 
    25582 > show to_show
    25583 
    25584 > hide #6.6/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25585 
    25586 > hbonds to_show restrict to_show color yellow
    25587 
    25588 22 hydrogen bonds found 
    25589 
    25590 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J89_cl6.png height 600 width
    25591 > 600 supersample 3
    25592 
    25593 > hide #!6.6 models
    25594 
    25595 > show #!6.7 models
    25596 
    25597 > hide #6.7
    25598 
    25599 > ~cartoon #6.7
    25600 
    25601 > color #6.7 white
    25602 
    25603 > color #6.7/a:2552 pale violet red
    25604 
    25605 > color #6.7/a:2553 khaki
    25606 
    25607 > color #6.7/a:2554 green yellow
    25608 
    25609 > color #6.7/a:2555 aquamarine
    25610 
    25611 > color #6.7/a:2556 steel blue
    25612 
    25613 > color #6.7/Y orchid
    25614 
    25615 > color #6.7/a:1955 pale green
    25616 
    25617 > color #6.7/a:2581 teal
    25618 
    25619 > color #6.7/a:2582 royal blue
    25620 
    25621 > color #6.7/a:2583 medium purple
    25622 
    25623 > color #6.7 white target c
    25624 
    25625 > name to_cartoon #6.7/a:2549-2559
    25626 
    25627 > name to_show #6.7/a:1955,2549-2559,2581-2584/Y:73-76
    25628 
    25629 > cartoon to_cartoon
    25630 
    25631 > show to_show
    25632 
    25633 > hide #6.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25634 
    25635 > hbonds to_show restrict to_show color yellow
    25636 
    25637 20 hydrogen bonds found 
    25638 
    25639 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J90_cl7.png height 600 width
    25640 > 600 supersample 3
    25641 
    25642 > hide #!6.7 models
    25643 
    25644 > show #!6.8 models
    25645 
    25646 > hide #6.8
    25647 
    25648 > ~cartoon #6.8
    25649 
    25650 > color #6.8 white
    25651 
    25652 > color #6.8/a:2552 pale violet red
    25653 
    25654 > color #6.8/a:2553 khaki
    25655 
    25656 > color #6.8/a:2554 green yellow
    25657 
    25658 > color #6.8/a:2555 aquamarine
    25659 
    25660 > color #6.8/a:2556 steel blue
    25661 
    25662 > color #6.8/Y orchid
    25663 
    25664 > color #6.8/a:1955 pale green
    25665 
    25666 > color #6.8/a:2581 teal
    25667 
    25668 > color #6.8/a:2582 royal blue
    25669 
    25670 > color #6.8/a:2583 medium purple
    25671 
    25672 > color #6.8 white target c
    25673 
    25674 > name to_cartoon #6.8/a:2549-2559
    25675 
    25676 > name to_show #6.8/a:1955,2549-2559,2581-2584/Y:73-76
    25677 
    25678 > cartoon to_cartoon
    25679 
    25680 > show to_show
    25681 
    25682 > hide #6.8/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25683 
    25684 > hbonds to_show restrict to_show color yellow
    25685 
    25686 15 hydrogen bonds found 
    25687 
    25688 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J91_cl8.png height 600 width
    25689 > 600 supersample 3
    25690 
    25691 > hide #!6.8 models
    25692 
    25693 > show #!6.9 models
    25694 
    25695 > hide #6.9
    25696 
    25697 > ~cartoon #6.9
    25698 
    25699 > color #6.9 white
    25700 
    25701 > color #6.9/a:2552 pale violet red
    25702 
    25703 > color #6.9/a:2553 khaki
    25704 
    25705 > color #6.9/a:2554 green yellow
    25706 
    25707 > color #6.9/a:2555 aquamarine
    25708 
    25709 > color #6.9/a:2556 steel blue
    25710 
    25711 > color #6.9/Y orchid
    25712 
    25713 > color #6.9/a:1955 pale green
    25714 
    25715 > color #6.9/a:2581 teal
    25716 
    25717 > color #6.9/a:2582 royal blue
    25718 
    25719 > color #6.9/a:2583 medium purple
    25720 
    25721 > color #6.9 white target c
    25722 
    25723 > name to_cartoon #6.9/a:2549-2559
    25724 
    25725 > name to_show #6.9/a:1955,2549-2559,2581-2584/Y:73-76
    25726 
    25727 > cartoon to_cartoon
    25728 
    25729 > show to_show
    25730 
    25731 > hide #6.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25732 
    25733 > hbonds to_show restrict to_show color yellow
    25734 
    25735 18 hydrogen bonds found 
    25736 
    25737 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J92_cl9.png height 600 width
    25738 > 600 supersample 3
    25739 
    25740 > hide #!6.9 models
    25741 
    25742 > show #!14.10 models
    25743 
    25744 > hide #14.10
    25745 
    25746 > ~cartoon #14.10
    25747 
    25748 > color #14.10 white
    25749 
    25750 > color #14.10/a:2552 pale violet red
    25751 
    25752 > color #14.10/a:2553 khaki
    25753 
    25754 > color #14.10/a:2554 green yellow
    25755 
    25756 > color #14.10/a:2555 aquamarine
    25757 
    25758 > color #14.10/a:2556 steel blue
    25759 
    25760 > color #14.10/Y orchid
    25761 
    25762 > color #14.10/a:1955 pale green
    25763 
    25764 > color #14.10/a:2581 teal
    25765 
    25766 > color #14.10/a:2582 royal blue
    25767 
    25768 > color #14.10/a:2583 medium purple
    25769 
    25770 > color #14.10 white target c
    25771 
    25772 > name to_cartoon #14.10/a:2549-2559
    25773 
    25774 > name to_show #14.10/a:1955,2549-2559,2581-2584/Y:73-76
    25775 
    25776 > cartoon to_cartoon
    25777 
    25778 > show to_show
    25779 
    25780 > hide #14.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25781 
    25782 > hbonds to_show restrict to_show color yellow
    25783 
    25784 17 hydrogen bonds found 
    25785 
    25786 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J53_c0.png height 600 width
    25787 > 600 supersample 3
    25788 
    25789 > hide #!14.10 models
    25790 
    25791 > show #!14.1 models
    25792 
    25793 > hide #14.1
    25794 
    25795 > ~cartoon #14.1
    25796 
    25797 > color #14.1 white
    25798 
    25799 > color #14.1/a:2552 pale violet red
    25800 
    25801 > color #14.1/a:2553 khaki
    25802 
    25803 > color #14.1/a:2554 green yellow
    25804 
    25805 > color #14.1/a:2555 aquamarine
    25806 
    25807 > color #14.1/a:2556 steel blue
    25808 
    25809 > color #14.1/Y orchid
    25810 
    25811 > color #14.1/a:1955 pale green
    25812 
    25813 > color #14.1/a:2581 teal
    25814 
    25815 > color #14.1/a:2582 royal blue
    25816 
    25817 > color #14.1/a:2583 medium purple
    25818 
    25819 > color #14.1 white target c
    25820 
    25821 > name to_cartoon #14.1/a:2549-2559
    25822 
    25823 > name to_show #14.1/a:1955,2549-2559,2581-2584/Y:73-76
    25824 
    25825 > cartoon to_cartoon
    25826 
    25827 > show to_show
    25828 
    25829 > hide #14.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25830 
    25831 > hbonds to_show restrict to_show color yellow
    25832 
    25833 18 hydrogen bonds found 
    25834 
    25835 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J54_c1.png height 600 width
    25836 > 600 supersample 3
    25837 
    25838 > hide #!14.1 models
    25839 
    25840 > show #!14.2 models
    25841 
    25842 > hide #14.2
    25843 
    25844 > ~cartoon #14.2
    25845 
    25846 > color #14.2 white
    25847 
    25848 > color #14.2/a:2552 pale violet red
    25849 
    25850 > color #14.2/a:2553 khaki
    25851 
    25852 > color #14.2/a:2554 green yellow
    25853 
    25854 > color #14.2/a:2555 aquamarine
    25855 
    25856 > color #14.2/a:2556 steel blue
    25857 
    25858 > color #14.2/Y orchid
    25859 
    25860 > color #14.2/a:1955 pale green
    25861 
    25862 > color #14.2/a:2581 teal
    25863 
    25864 > color #14.2/a:2582 royal blue
    25865 
    25866 > color #14.2/a:2583 medium purple
    25867 
    25868 > color #14.2 white target c
    25869 
    25870 > name to_cartoon #14.2/a:2549-2559
    25871 
    25872 > name to_show #14.2/a:1955,2549-2559,2581-2584/Y:73-76
    25873 
    25874 > cartoon to_cartoon
    25875 
    25876 > show to_show
    25877 
    25878 > hide #14.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25879 
    25880 > hbonds to_show restrict to_show color yellow
    25881 
    25882 18 hydrogen bonds found 
    25883 
    25884 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J55_c2.png height 600 width
    25885 > 600 supersample 3
    25886 
    25887 > hide #!14.2 models
    25888 
    25889 > show #!14.3 models
    25890 
    25891 > hide #14.3
    25892 
    25893 > ~cartoon #14.3
    25894 
    25895 > color #14.3 white
    25896 
    25897 > color #14.3/a:2552 pale violet red
    25898 
    25899 > color #14.3/a:2553 khaki
    25900 
    25901 > color #14.3/a:2554 green yellow
    25902 
    25903 > color #14.3/a:2555 aquamarine
    25904 
    25905 > color #14.3/a:2556 steel blue
    25906 
    25907 > color #14.3/Y orchid
    25908 
    25909 > color #14.3/a:1955 pale green
    25910 
    25911 > color #14.3/a:2581 teal
    25912 
    25913 > color #14.3/a:2582 royal blue
    25914 
    25915 > color #14.3/a:2583 medium purple
    25916 
    25917 > color #14.3 white target c
    25918 
    25919 > name to_cartoon #14.3/a:2549-2559
    25920 
    25921 > name to_show #14.3/a:1955,2549-2559,2581-2584/Y:73-76
    25922 
    25923 > cartoon to_cartoon
    25924 
    25925 > show to_show
    25926 
    25927 > hide #14.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25928 
    25929 > hbonds to_show restrict to_show color yellow
    25930 
    25931 24 hydrogen bonds found 
    25932 
    25933 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J56_c3.png height 600 width
    25934 > 600 supersample 3
    25935 
    25936 > hide #!14.3 models
    25937 
    25938 > show #!14.4 models
    25939 
    25940 > hide #14.4
    25941 
    25942 > ~cartoon #14.4
    25943 
    25944 > color #14.4 white
    25945 
    25946 > color #14.4/a:2552 pale violet red
    25947 
    25948 > color #14.4/a:2553 khaki
    25949 
    25950 > color #14.4/a:2554 green yellow
    25951 
    25952 > color #14.4/a:2555 aquamarine
    25953 
    25954 > color #14.4/a:2556 steel blue
    25955 
    25956 > color #14.4/Y orchid
    25957 
    25958 > color #14.4/a:1955 pale green
    25959 
    25960 > color #14.4/a:2581 teal
    25961 
    25962 > color #14.4/a:2582 royal blue
    25963 
    25964 > color #14.4/a:2583 medium purple
    25965 
    25966 > color #14.4 white target c
    25967 
    25968 > name to_cartoon #14.4/a:2549-2559
    25969 
    25970 > name to_show #14.4/a:1955,2549-2559,2581-2584/Y:73-76
    25971 
    25972 > cartoon to_cartoon
    25973 
    25974 > show to_show
    25975 
    25976 > hide #14.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    25977 
    25978 > hbonds to_show restrict to_show color yellow
    25979 
    25980 17 hydrogen bonds found 
    25981 
    25982 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J57_c4.png height 600 width
    25983 > 600 supersample 3
    25984 
    25985 > hide #!14.4 models
    25986 
    25987 > show #!14.5 models
    25988 
    25989 > hide #14.5
    25990 
    25991 > ~cartoon #14.5
    25992 
    25993 > color #14.5 white
    25994 
    25995 > color #14.5/a:2552 pale violet red
    25996 
    25997 > color #14.5/a:2553 khaki
    25998 
    25999 > color #14.5/a:2554 green yellow
    26000 
    26001 > color #14.5/a:2555 aquamarine
    26002 
    26003 > color #14.5/a:2556 steel blue
    26004 
    26005 > color #14.5/Y orchid
    26006 
    26007 > color #14.5/a:1955 pale green
    26008 
    26009 > color #14.5/a:2581 teal
    26010 
    26011 > color #14.5/a:2582 royal blue
    26012 
    26013 > color #14.5/a:2583 medium purple
    26014 
    26015 > color #14.5 white target c
    26016 
    26017 > name to_cartoon #14.5/a:2549-2559
    26018 
    26019 > name to_show #14.5/a:1955,2549-2559,2581-2584/Y:73-76
    26020 
    26021 > cartoon to_cartoon
    26022 
    26023 > show to_show
    26024 
    26025 > hide #14.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26026 
    26027 > hbonds to_show restrict to_show color yellow
    26028 
    26029 16 hydrogen bonds found 
    26030 
    26031 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J58_c5.png height 600 width
    26032 > 600 supersample 3
    26033 
    26034 > hide #!14.5 models
    26035 
    26036 > show #!14.6 models
    26037 
    26038 > hide #14.6
    26039 
    26040 > ~cartoon #14.6
    26041 
    26042 > color #14.6 white
    26043 
    26044 > color #14.6/a:2552 pale violet red
    26045 
    26046 > color #14.6/a:2553 khaki
    26047 
    26048 > color #14.6/a:2554 green yellow
    26049 
    26050 > color #14.6/a:2555 aquamarine
    26051 
    26052 > color #14.6/a:2556 steel blue
    26053 
    26054 > color #14.6/Y orchid
    26055 
    26056 > color #14.6/a:1955 pale green
    26057 
    26058 > color #14.6/a:2581 teal
    26059 
    26060 > color #14.6/a:2582 royal blue
    26061 
    26062 > color #14.6/a:2583 medium purple
    26063 
    26064 > color #14.6 white target c
    26065 
    26066 > name to_cartoon #14.6/a:2549-2559
    26067 
    26068 > name to_show #14.6/a:1955,2549-2559,2581-2584/Y:73-76
    26069 
    26070 > cartoon to_cartoon
    26071 
    26072 > show to_show
    26073 
    26074 > hide #14.6/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26075 
    26076 > hbonds to_show restrict to_show color yellow
    26077 
    26078 20 hydrogen bonds found 
    26079 
    26080 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J59_c6.png height 600 width
    26081 > 600 supersample 3
    26082 
    26083 > hide #!14.6 models
    26084 
    26085 > show #!14.7 models
    26086 
    26087 > hide #14.7
    26088 
    26089 > ~cartoon #14.7
    26090 
    26091 > color #14.7 white
    26092 
    26093 > color #14.7/a:2552 pale violet red
    26094 
    26095 > color #14.7/a:2553 khaki
    26096 
    26097 > color #14.7/a:2554 green yellow
    26098 
    26099 > color #14.7/a:2555 aquamarine
    26100 
    26101 > color #14.7/a:2556 steel blue
    26102 
    26103 > color #14.7/Y orchid
    26104 
    26105 > color #14.7/a:1955 pale green
    26106 
    26107 > color #14.7/a:2581 teal
    26108 
    26109 > color #14.7/a:2582 royal blue
    26110 
    26111 > color #14.7/a:2583 medium purple
    26112 
    26113 > color #14.7 white target c
    26114 
    26115 > name to_cartoon #14.7/a:2549-2559
    26116 
    26117 > name to_show #14.7/a:1955,2549-2559,2581-2584/Y:73-76
    26118 
    26119 > cartoon to_cartoon
    26120 
    26121 > show to_show
    26122 
    26123 > hide #14.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26124 
    26125 > hbonds to_show restrict to_show color yellow
    26126 
    26127 22 hydrogen bonds found 
    26128 
    26129 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J60_c7.png height 600 width
    26130 > 600 supersample 3
    26131 
    26132 > hide #!14.7 models
    26133 
    26134 > show #!14.8 models
    26135 
    26136 > hide #14.8
    26137 
    26138 > ~cartoon #14.8
    26139 
    26140 > color #14.8 white
    26141 
    26142 > color #14.8/a:2552 pale violet red
    26143 
    26144 > color #14.8/a:2553 khaki
    26145 
    26146 > color #14.8/a:2554 green yellow
    26147 
    26148 > color #14.8/a:2555 aquamarine
    26149 
    26150 > color #14.8/a:2556 steel blue
    26151 
    26152 > color #14.8/Y orchid
    26153 
    26154 > color #14.8/a:1955 pale green
    26155 
    26156 > color #14.8/a:2581 teal
    26157 
    26158 > color #14.8/a:2582 royal blue
    26159 
    26160 > color #14.8/a:2583 medium purple
    26161 
    26162 > color #14.8 white target c
    26163 
    26164 > name to_cartoon #14.8/a:2549-2559
    26165 
    26166 > name to_show #14.8/a:1955,2549-2559,2581-2584/Y:73-76
    26167 
    26168 > cartoon to_cartoon
    26169 
    26170 > show to_show
    26171 
    26172 > hide #14.8/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26173 
    26174 > hbonds to_show restrict to_show color yellow
    26175 
    26176 21 hydrogen bonds found 
    26177 
    26178 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J61_c8.png height 600 width
    26179 > 600 supersample 3
    26180 
    26181 > hide #!14.8 models
    26182 
    26183 > show #!14.9 models
    26184 
    26185 > hide #14.9
    26186 
    26187 > ~cartoon #14.9
    26188 
    26189 > color #14.9 white
    26190 
    26191 > color #14.9/a:2552 pale violet red
    26192 
    26193 > color #14.9/a:2553 khaki
    26194 
    26195 > color #14.9/a:2554 green yellow
    26196 
    26197 > color #14.9/a:2555 aquamarine
    26198 
    26199 > color #14.9/a:2556 steel blue
    26200 
    26201 > color #14.9/Y orchid
    26202 
    26203 > color #14.9/a:1955 pale green
    26204 
    26205 > color #14.9/a:2581 teal
    26206 
    26207 > color #14.9/a:2582 royal blue
    26208 
    26209 > color #14.9/a:2583 medium purple
    26210 
    26211 > color #14.9 white target c
    26212 
    26213 > name to_cartoon #14.9/a:2549-2559
    26214 
    26215 > name to_show #14.9/a:1955,2549-2559,2581-2584/Y:73-76
    26216 
    26217 > cartoon to_cartoon
    26218 
    26219 > show to_show
    26220 
    26221 > hide #14.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26222 
    26223 > hbonds to_show restrict to_show color yellow
    26224 
    26225 27 hydrogen bonds found 
    26226 
    26227 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J62_c9.png height 600 width
    26228 > 600 supersample 3
    26229 
    26230 > hide #!14.9 models
    26231 
    26232 > show #!22.1 models
    26233 
    26234 > hide #22.1
    26235 
    26236 > ~cartoon #22.1
    26237 
    26238 > color #22.1 white
    26239 
    26240 > color #22.1/a:2552 pale violet red
    26241 
    26242 > color #22.1/a:2553 khaki
    26243 
    26244 > color #22.1/a:2554 green yellow
    26245 
    26246 > color #22.1/a:2555 aquamarine
    26247 
    26248 > color #22.1/a:2556 steel blue
    26249 
    26250 > color #22.1/Y orchid
    26251 
    26252 > color #22.1/a:1955 pale green
    26253 
    26254 > color #22.1/a:2581 teal
    26255 
    26256 > color #22.1/a:2582 royal blue
    26257 
    26258 > color #22.1/a:2583 medium purple
    26259 
    26260 > color #22.1 white target c
    26261 
    26262 > name to_cartoon #22.1/a:2549-2559
    26263 
    26264 > name to_show #22.1/a:1955,2549-2559,2581-2584/Y:73-76
    26265 
    26266 > cartoon to_cartoon
    26267 
    26268 > show to_show
    26269 
    26270 > hide #22.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26271 
    26272 > hbonds to_show restrict to_show color yellow
    26273 
    26274 24 hydrogen bonds found 
    26275 
    26276 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J111_ape.png height 600 width
    26277 > 600 supersample 3
    26278 
    26279 > hide #!22.1 models
    26280 
    26281 > show #!22.2 models
    26282 
    26283 > hide #22.2
    26284 
    26285 > ~cartoon #22.2
    26286 
    26287 > color #22.2 white
    26288 
    26289 > color #22.2/a:2552 pale violet red
    26290 
    26291 > color #22.2/a:2553 khaki
    26292 
    26293 > color #22.2/a:2554 green yellow
    26294 
    26295 > color #22.2/a:2555 aquamarine
    26296 
    26297 > color #22.2/a:2556 steel blue
    26298 
    26299 > color #22.2/Y orchid
    26300 
    26301 > color #22.2/a:1955 pale green
    26302 
    26303 > color #22.2/a:2581 teal
    26304 
    26305 > color #22.2/a:2582 royal blue
    26306 
    26307 > color #22.2/a:2583 medium purple
    26308 
    26309 > color #22.2 white target c
    26310 
    26311 > name to_cartoon #22.2/a:2549-2559
    26312 
    26313 > name to_show #22.2/a:1955,2549-2559,2581-2584/Y:73-76
    26314 
    26315 > cartoon to_cartoon
    26316 
    26317 > show to_show
    26318 
    26319 > hide #22.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26320 
    26321 > hbonds to_show restrict to_show color yellow
    26322 
    26323 25 hydrogen bonds found 
    26324 
    26325 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J112_ap.png height 600 width
    26326 > 600 supersample 3
    26327 
    26328 > hide #!22.2 models
    26329 
    26330 > show #!22.3 models
    26331 
    26332 > hide #22.3
    26333 
    26334 > ~cartoon #22.3
    26335 
    26336 > color #22.3 white
    26337 
    26338 > color #22.3/a:2552 pale violet red
    26339 
    26340 > color #22.3/a:2553 khaki
    26341 
    26342 > color #22.3/a:2554 green yellow
    26343 
    26344 > color #22.3/a:2555 aquamarine
    26345 
    26346 > color #22.3/a:2556 steel blue
    26347 
    26348 > color #22.3/Y orchid
    26349 
    26350 > color #22.3/a:1955 pale green
    26351 
    26352 > color #22.3/a:2581 teal
    26353 
    26354 > color #22.3/a:2582 royal blue
    26355 
    26356 > color #22.3/a:2583 medium purple
    26357 
    26358 > color #22.3 white target c
    26359 
    26360 > name to_cartoon #22.3/a:2549-2559
    26361 
    26362 > name to_show #22.3/a:1955,2549-2559,2581-2584/Y:73-76
    26363 
    26364 > cartoon to_cartoon
    26365 
    26366 > show to_show
    26367 
    26368 > hide #22.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26369 
    26370 > hbonds to_show restrict to_show color yellow
    26371 
    26372 16 hydrogen bonds found 
    26373 
    26374 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J113_pe.png height 600 width
    26375 > 600 supersample 3
    26376 
    26377 > hide #!22.3 models
    26378 
    26379 > show #!22.4 models
    26380 
    26381 > hide #22.4
    26382 
    26383 > ~cartoon #22.4
    26384 
    26385 > color #22.4 white
    26386 
    26387 > color #22.4/a:2552 pale violet red
    26388 
    26389 > color #22.4/a:2553 khaki
    26390 
    26391 > color #22.4/a:2554 green yellow
    26392 
    26393 > color #22.4/a:2555 aquamarine
    26394 
    26395 > color #22.4/a:2556 steel blue
    26396 
    26397 > color #22.4/Y orchid
    26398 
    26399 > color #22.4/a:1955 pale green
    26400 
    26401 > color #22.4/a:2581 teal
    26402 
    26403 > color #22.4/a:2582 royal blue
    26404 
    26405 > color #22.4/a:2583 medium purple
    26406 
    26407 > color #22.4 white target c
    26408 
    26409 > name to_cartoon #22.4/a:2549-2559
    26410 
    26411 > name to_show #22.4/a:1955,2549-2559,2581-2584/Y:73-76
    26412 
    26413 > cartoon to_cartoon
    26414 
    26415 > show to_show
    26416 
    26417 > hide #22.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26418 
    26419 > hbonds to_show restrict to_show color yellow
    26420 
    26421 18 hydrogen bonds found 
    26422 
    26423 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J124_e.png height 600 width
    26424 > 600 supersample 3
    26425 
    26426 > hide #!22.4 models
    26427 
    26428 > graphics quality 1
    26429 
    26430 > show #!1.2 models
    26431 
    26432 > hide #1.2
    26433 
    26434 > ~cartoon #1.2
    26435 
    26436 > color #1.2 white
    26437 
    26438 > color #1.2/a:2552 pale violet red
    26439 
    26440 > color #1.2/a:2553 khaki
    26441 
    26442 > color #1.2/a:2554 green yellow
    26443 
    26444 > color #1.2/a:2555 aquamarine
    26445 
    26446 > color #1.2/a:2556 steel blue
    26447 
    26448 > color #1.2/Y orchid
    26449 
    26450 > color #1.2/a:1955 pale green
    26451 
    26452 > color #1.2/a:2581 teal
    26453 
    26454 > color #1.2/a:2582 royal blue
    26455 
    26456 > color #1.2/a:2583 medium purple
    26457 
    26458 > color #1.2 white target c
    26459 
    26460 > name to_cartoon #1.2/a:2549-2559
    26461 
    26462 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    26463 
    26464 > cartoon to_cartoon
    26465 
    26466 > show to_show
    26467 
    26468 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26469 
    26470 > hbonds to_show restrict to_show color yellow
    26471 
    26472 24 hydrogen bonds found 
    26473 
    26474 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    26475 > supersample 3
    26476 
    26477 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    26478 
    26479 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    26480 > supersample 3
    26481 
    26482 > hide #!1.2 models
    26483 
    26484 > graphics quality 3
    26485 
    26486 > show #!1.2 models
    26487 
    26488 > hide #1.2
    26489 
    26490 > ~cartoon #1.2
    26491 
    26492 > color #1.2 white
    26493 
    26494 > color #1.2/a:2552 pale violet red
    26495 
    26496 > color #1.2/a:2553 khaki
    26497 
    26498 > color #1.2/a:2554 green yellow
    26499 
    26500 > color #1.2/a:2555 aquamarine
    26501 
    26502 > color #1.2/a:2556 steel blue
    26503 
    26504 > color #1.2/Y orchid
    26505 
    26506 > color #1.2/a:1955 pale green
    26507 
    26508 > color #1.2/a:2581 teal
    26509 
    26510 > color #1.2/a:2582 royal blue
    26511 
    26512 > color #1.2/a:2583 medium purple
    26513 
    26514 > color #1.2 white target c
    26515 
    26516 > name to_cartoon #1.2/a:2549-2559
    26517 
    26518 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    26519 
    26520 > cartoon to_cartoon
    26521 
    26522 > show to_show
    26523 
    26524 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26525 
    26526 > hbonds to_show restrict to_show color yellow
    26527 
    26528 24 hydrogen bonds found 
    26529 
    26530 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 200 width 200
    26531 > supersample 3
    26532 
    26533 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    26534 
    26535 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 200 width 200
    26536 > supersample 3
    26537 
    26538 > hide #!1.2 models
    26539 
    26540 > show #!1.7 models
    26541 
    26542 > hide #1.7
    26543 
    26544 > ~cartoon #1.7
    26545 
    26546 > color #1.7 white
    26547 
    26548 > color #1.7/a:2552 pale violet red
    26549 
    26550 > color #1.7/a:2553 khaki
    26551 
    26552 > color #1.7/a:2554 green yellow
    26553 
    26554 > color #1.7/a:2555 aquamarine
    26555 
    26556 > color #1.7/a:2556 steel blue
    26557 
    26558 > color #1.7/Y orchid
    26559 
    26560 > color #1.7/a:1955 pale green
    26561 
    26562 > color #1.7/a:2581 teal
    26563 
    26564 > color #1.7/a:2582 royal blue
    26565 
    26566 > color #1.7/a:2583 medium purple
    26567 
    26568 > color #1.7 white target c
    26569 
    26570 > name to_cartoon #1.7/a:2549-2559
    26571 
    26572 > name to_show #1.7/a:1955,2549-2559,2581-2584/Y:73-76
    26573 
    26574 > cartoon to_cartoon
    26575 
    26576 > show to_show
    26577 
    26578 > hide #1.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26579 
    26580 > hbonds to_show restrict to_show color yellow
    26581 
    26582 16 hydrogen bonds found 
    26583 
    26584 > save /Users/dalar193/Desktop/A_loop/A_loop_8cgk.png height 200 width 200
    26585 > supersample 3
    26586 
    26587 > hide #!1.7 models
    26588 
    26589 > show #!1.9 models
    26590 
    26591 > hide #1.9
    26592 
    26593 > ~cartoon #1.9
    26594 
    26595 > color #1.9 white
    26596 
    26597 > color #1.9/A:2552 pale violet red
    26598 
    26599 > color #1.9/A:2553 khaki
    26600 
    26601 > color #1.9/A:2554 green yellow
    26602 
    26603 > color #1.9/A:2555 aquamarine
    26604 
    26605 > color #1.9/A:2556 steel blue
    26606 
    26607 > color #1.9/Y orchid
    26608 
    26609 > color #1.9/A:1955 pale green
    26610 
    26611 > color #1.9/A:2581 teal
    26612 
    26613 > color #1.9/A:2582 royal blue
    26614 
    26615 > color #1.9/A:2583 medium purple
    26616 
    26617 > color #1.9 white target c
    26618 
    26619 > name to_cartoon #1.9/A:2549-2559
    26620 
    26621 > name to_show #1.9/A:1955,2549-2559,2581-2584/Y:73-76
    26622 
    26623 > cartoon to_cartoon
    26624 
    26625 > show to_show
    26626 
    26627 > hide #1.9/A:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26628 
    26629 > hbonds to_show restrict to_show color yellow
    26630 
    26631 25 hydrogen bonds found 
    26632 
    26633 > save /Users/dalar193/Desktop/A_loop/A_loop_7bv8.png height 200 width 200
    26634 > supersample 3
    26635 
    26636 > hide #!1.9 models
    26637 
    26638 > show #!1.11 models
    26639 
    26640 > hide #1.11
    26641 
    26642 > ~cartoon #1.11
    26643 
    26644 > color #1.11 white
    26645 
    26646 > color #1.11/BA:2552 pale violet red
    26647 
    26648 > color #1.11/BA:2553 khaki
    26649 
    26650 > color #1.11/BA:2554 green yellow
    26651 
    26652 > color #1.11/BA:2555 aquamarine
    26653 
    26654 > color #1.11/BA:2556 steel blue
    26655 
    26656 > color #1.11/Y orchid
    26657 
    26658 > color #1.11/BA:1955 pale green
    26659 
    26660 > color #1.11/BA:2581 teal
    26661 
    26662 > color #1.11/BA:2582 royal blue
    26663 
    26664 > color #1.11/BA:2583 medium purple
    26665 
    26666 > color #1.11 white target c
    26667 
    26668 > name to_cartoon #1.11/BA:2549-2559
    26669 
    26670 > name to_show #1.11/BA:1955,2549-2559,2581-2584/Y:73-76
    26671 
    26672 > cartoon to_cartoon
    26673 
    26674 > show to_show
    26675 
    26676 > hide #1.11/BA:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26677 
    26678 > hbonds to_show restrict to_show color yellow
    26679 
    26680 17 hydrogen bonds found 
    26681 
    26682 > save /Users/dalar193/Desktop/A_loop/A_loop_7o1a.png height 200 width 200
    26683 > supersample 3
    26684 
    26685 > hide #!1.11 models
    26686 
    26687 > show #!6.10 models
    26688 
    26689 > hide #6.10
    26690 
    26691 > ~cartoon #6.10
    26692 
    26693 > color #6.10 white
    26694 
    26695 > color #6.10/a:2552 pale violet red
    26696 
    26697 > color #6.10/a:2553 khaki
    26698 
    26699 > color #6.10/a:2554 green yellow
    26700 
    26701 > color #6.10/a:2555 aquamarine
    26702 
    26703 > color #6.10/a:2556 steel blue
    26704 
    26705 > color #6.10/Y orchid
    26706 
    26707 > color #6.10/a:1955 pale green
    26708 
    26709 > color #6.10/a:2581 teal
    26710 
    26711 > color #6.10/a:2582 royal blue
    26712 
    26713 > color #6.10/a:2583 medium purple
    26714 
    26715 > color #6.10 white target c
    26716 
    26717 > name to_cartoon #6.10/a:2549-2559
    26718 
    26719 > name to_show #6.10/a:1955,2549-2559,2581-2584/Y:73-76
    26720 
    26721 > cartoon to_cartoon
    26722 
    26723 > show to_show
    26724 
    26725 > hide #6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26726 
    26727 > hbonds to_show restrict to_show color yellow
    26728 
    26729 16 hydrogen bonds found 
    26730 
    26731 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J83_cl0.png height 200 width
    26732 > 200 supersample 3
    26733 
    26734 > hide #!6.10 models
    26735 
    26736 > show #!6.1 models
    26737 
    26738 > hide #6.1
    26739 
    26740 > ~cartoon #6.1
    26741 
    26742 > color #6.1 white
    26743 
    26744 > color #6.1/a:2552 pale violet red
    26745 
    26746 > color #6.1/a:2553 khaki
    26747 
    26748 > color #6.1/a:2554 green yellow
    26749 
    26750 > color #6.1/a:2555 aquamarine
    26751 
    26752 > color #6.1/a:2556 steel blue
    26753 
    26754 > color #6.1/Y orchid
    26755 
    26756 > color #6.1/a:1955 pale green
    26757 
    26758 > color #6.1/a:2581 teal
    26759 
    26760 > color #6.1/a:2582 royal blue
    26761 
    26762 > color #6.1/a:2583 medium purple
    26763 
    26764 > color #6.1 white target c
    26765 
    26766 > name to_cartoon #6.1/a:2549-2559
    26767 
    26768 > name to_show #6.1/a:1955,2549-2559,2581-2584/Y:73-76
    26769 
    26770 > cartoon to_cartoon
    26771 
    26772 > show to_show
    26773 
    26774 > hide #6.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26775 
    26776 > hbonds to_show restrict to_show color yellow
    26777 
    26778 19 hydrogen bonds found 
    26779 
    26780 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J84_cl1.png height 200 width
    26781 > 200 supersample 3
    26782 
    26783 > hide #!6.1 models
    26784 
    26785 > show #!6.2 models
    26786 
    26787 > hide #6.2
    26788 
    26789 > ~cartoon #6.2
    26790 
    26791 > color #6.2 white
    26792 
    26793 > color #6.2/a:2552 pale violet red
    26794 
    26795 > color #6.2/a:2553 khaki
    26796 
    26797 > color #6.2/a:2554 green yellow
    26798 
    26799 > color #6.2/a:2555 aquamarine
    26800 
    26801 > color #6.2/a:2556 steel blue
    26802 
    26803 > color #6.2/Y orchid
    26804 
    26805 > color #6.2/a:1955 pale green
    26806 
    26807 > color #6.2/a:2581 teal
    26808 
    26809 > color #6.2/a:2582 royal blue
    26810 
    26811 > color #6.2/a:2583 medium purple
    26812 
    26813 > color #6.2 white target c
    26814 
    26815 > name to_cartoon #6.2/a:2549-2559
    26816 
    26817 > name to_show #6.2/a:1955,2549-2559,2581-2584/Y:73-76
    26818 
    26819 > cartoon to_cartoon
    26820 
    26821 > show to_show
    26822 
    26823 > hide #6.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26824 
    26825 > hbonds to_show restrict to_show color yellow
    26826 
    26827 23 hydrogen bonds found 
    26828 
    26829 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J85_cl2.png height 200 width
    26830 > 200 supersample 3
    26831 
    26832 > hide #!6.2 models
    26833 
    26834 > show #!6.3 models
    26835 
    26836 > hide #6.3
    26837 
    26838 > ~cartoon #6.3
    26839 
    26840 > color #6.3 white
    26841 
    26842 > color #6.3/a:2552 pale violet red
    26843 
    26844 > color #6.3/a:2553 khaki
    26845 
    26846 > color #6.3/a:2554 green yellow
    26847 
    26848 > color #6.3/a:2555 aquamarine
    26849 
    26850 > color #6.3/a:2556 steel blue
    26851 
    26852 > color #6.3/Y orchid
    26853 
    26854 > color #6.3/a:1955 pale green
    26855 
    26856 > color #6.3/a:2581 teal
    26857 
    26858 > color #6.3/a:2582 royal blue
    26859 
    26860 > color #6.3/a:2583 medium purple
    26861 
    26862 > color #6.3 white target c
    26863 
    26864 > name to_cartoon #6.3/a:2549-2559
    26865 
    26866 > name to_show #6.3/a:1955,2549-2559,2581-2584/Y:73-76
    26867 
    26868 > cartoon to_cartoon
    26869 
    26870 > show to_show
    26871 
    26872 > hide #6.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26873 
    26874 > hbonds to_show restrict to_show color yellow
    26875 
    26876 16 hydrogen bonds found 
    26877 
    26878 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J86_cl3.png height 200 width
    26879 > 200 supersample 3
    26880 
    26881 > hide #!6.3 models
    26882 
    26883 > show #!6.4 models
    26884 
    26885 > hide #6.4
    26886 
    26887 > ~cartoon #6.4
    26888 
    26889 > color #6.4 white
    26890 
    26891 > color #6.4/a:2552 pale violet red
    26892 
    26893 > color #6.4/a:2553 khaki
    26894 
    26895 > color #6.4/a:2554 green yellow
    26896 
    26897 > color #6.4/a:2555 aquamarine
    26898 
    26899 > color #6.4/a:2556 steel blue
    26900 
    26901 > color #6.4/Y orchid
    26902 
    26903 > color #6.4/a:1955 pale green
    26904 
    26905 > color #6.4/a:2581 teal
    26906 
    26907 > color #6.4/a:2582 royal blue
    26908 
    26909 > color #6.4/a:2583 medium purple
    26910 
    26911 > color #6.4 white target c
    26912 
    26913 > name to_cartoon #6.4/a:2549-2559
    26914 
    26915 > name to_show #6.4/a:1955,2549-2559,2581-2584/Y:73-76
    26916 
    26917 > cartoon to_cartoon
    26918 
    26919 > show to_show
    26920 
    26921 > hide #6.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26922 
    26923 > hbonds to_show restrict to_show color yellow
    26924 
    26925 22 hydrogen bonds found 
    26926 
    26927 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J87_cl4.png height 200 width
    26928 > 200 supersample 3
    26929 
    26930 > hide #!6.4 models
    26931 
    26932 > show #!6.5 models
    26933 
    26934 > hide #6.5
    26935 
    26936 > ~cartoon #6.5
    26937 
    26938 > color #6.5 white
    26939 
    26940 > color #6.5/a:2552 pale violet red
    26941 
    26942 > color #6.5/a:2553 khaki
    26943 
    26944 > color #6.5/a:2554 green yellow
    26945 
    26946 > color #6.5/a:2555 aquamarine
    26947 
    26948 > color #6.5/a:2556 steel blue
    26949 
    26950 > color #6.5/Y orchid
    26951 
    26952 > color #6.5/a:1955 pale green
    26953 
    26954 > color #6.5/a:2581 teal
    26955 
    26956 > color #6.5/a:2582 royal blue
    26957 
    26958 > color #6.5/a:2583 medium purple
    26959 
    26960 > color #6.5 white target c
    26961 
    26962 > name to_cartoon #6.5/a:2549-2559
    26963 
    26964 > name to_show #6.5/a:1955,2549-2559,2581-2584/Y:73-76
    26965 
    26966 > cartoon to_cartoon
    26967 
    26968 > show to_show
    26969 
    26970 > hide #6.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    26971 
    26972 > hbonds to_show restrict to_show color yellow
    26973 
    26974 16 hydrogen bonds found 
    26975 
    26976 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J88_cl5.png height 200 width
    26977 > 200 supersample 3
    26978 
    26979 > hide #!6.5 models
    26980 
    26981 > show #!6.6 models
    26982 
    26983 > hide #6.6
    26984 
    26985 > ~cartoon #6.6
    26986 
    26987 > color #6.6 white
    26988 
    26989 > color #6.6/a:2552 pale violet red
    26990 
    26991 > color #6.6/a:2553 khaki
    26992 
    26993 > color #6.6/a:2554 green yellow
    26994 
    26995 > color #6.6/a:2555 aquamarine
    26996 
    26997 > color #6.6/a:2556 steel blue
    26998 
    26999 > color #6.6/Y orchid
    27000 
    27001 > color #6.6/a:1955 pale green
    27002 
    27003 > color #6.6/a:2581 teal
    27004 
    27005 > color #6.6/a:2582 royal blue
    27006 
    27007 > color #6.6/a:2583 medium purple
    27008 
    27009 > color #6.6 white target c
    27010 
    27011 > name to_cartoon #6.6/a:2549-2559
    27012 
    27013 > name to_show #6.6/a:1955,2549-2559,2581-2584/Y:73-76
    27014 
    27015 > cartoon to_cartoon
    27016 
    27017 > show to_show
    27018 
    27019 > hide #6.6/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27020 
    27021 > hbonds to_show restrict to_show color yellow
    27022 
    27023 22 hydrogen bonds found 
    27024 
    27025 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J89_cl6.png height 200 width
    27026 > 200 supersample 3
    27027 
    27028 > hide #!6.6 models
    27029 
    27030 > show #!6.7 models
    27031 
    27032 > hide #6.7
    27033 
    27034 > ~cartoon #6.7
    27035 
    27036 > color #6.7 white
    27037 
    27038 > color #6.7/a:2552 pale violet red
    27039 
    27040 > color #6.7/a:2553 khaki
    27041 
    27042 > color #6.7/a:2554 green yellow
    27043 
    27044 > color #6.7/a:2555 aquamarine
    27045 
    27046 > color #6.7/a:2556 steel blue
    27047 
    27048 > color #6.7/Y orchid
    27049 
    27050 > color #6.7/a:1955 pale green
    27051 
    27052 > color #6.7/a:2581 teal
    27053 
    27054 > color #6.7/a:2582 royal blue
    27055 
    27056 > color #6.7/a:2583 medium purple
    27057 
    27058 > color #6.7 white target c
    27059 
    27060 > name to_cartoon #6.7/a:2549-2559
    27061 
    27062 > name to_show #6.7/a:1955,2549-2559,2581-2584/Y:73-76
    27063 
    27064 > cartoon to_cartoon
    27065 
    27066 > show to_show
    27067 
    27068 > hide #6.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27069 
    27070 > hbonds to_show restrict to_show color yellow
    27071 
    27072 20 hydrogen bonds found 
    27073 
    27074 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J90_cl7.png height 200 width
    27075 > 200 supersample 3
    27076 
    27077 > hide #!6.7 models
    27078 
    27079 > show #!6.8 models
    27080 
    27081 > hide #6.8
    27082 
    27083 > ~cartoon #6.8
    27084 
    27085 > color #6.8 white
    27086 
    27087 > color #6.8/a:2552 pale violet red
    27088 
    27089 > color #6.8/a:2553 khaki
    27090 
    27091 > color #6.8/a:2554 green yellow
    27092 
    27093 > color #6.8/a:2555 aquamarine
    27094 
    27095 > color #6.8/a:2556 steel blue
    27096 
    27097 > color #6.8/Y orchid
    27098 
    27099 > color #6.8/a:1955 pale green
    27100 
    27101 > color #6.8/a:2581 teal
    27102 
    27103 > color #6.8/a:2582 royal blue
    27104 
    27105 > color #6.8/a:2583 medium purple
    27106 
    27107 > color #6.8 white target c
    27108 
    27109 > name to_cartoon #6.8/a:2549-2559
    27110 
    27111 > name to_show #6.8/a:1955,2549-2559,2581-2584/Y:73-76
    27112 
    27113 > cartoon to_cartoon
    27114 
    27115 > show to_show
    27116 
    27117 > hide #6.8/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27118 
    27119 > hbonds to_show restrict to_show color yellow
    27120 
    27121 15 hydrogen bonds found 
    27122 
    27123 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J91_cl8.png height 200 width
    27124 > 200 supersample 3
    27125 
    27126 > hide #!6.8 models
    27127 
    27128 > show #!6.9 models
    27129 
    27130 > hide #6.9
    27131 
    27132 > ~cartoon #6.9
    27133 
    27134 > color #6.9 white
    27135 
    27136 > color #6.9/a:2552 pale violet red
    27137 
    27138 > color #6.9/a:2553 khaki
    27139 
    27140 > color #6.9/a:2554 green yellow
    27141 
    27142 > color #6.9/a:2555 aquamarine
    27143 
    27144 > color #6.9/a:2556 steel blue
    27145 
    27146 > color #6.9/Y orchid
    27147 
    27148 > color #6.9/a:1955 pale green
    27149 
    27150 > color #6.9/a:2581 teal
    27151 
    27152 > color #6.9/a:2582 royal blue
    27153 
    27154 > color #6.9/a:2583 medium purple
    27155 
    27156 > color #6.9 white target c
    27157 
    27158 > name to_cartoon #6.9/a:2549-2559
    27159 
    27160 > name to_show #6.9/a:1955,2549-2559,2581-2584/Y:73-76
    27161 
    27162 > cartoon to_cartoon
    27163 
    27164 > show to_show
    27165 
    27166 > hide #6.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27167 
    27168 > hbonds to_show restrict to_show color yellow
    27169 
    27170 18 hydrogen bonds found 
    27171 
    27172 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J92_cl9.png height 200 width
    27173 > 200 supersample 3
    27174 
    27175 > hide #!6.9 models
    27176 
    27177 > show #!14.10 models
    27178 
    27179 > hide #14.10
    27180 
    27181 > ~cartoon #14.10
    27182 
    27183 > color #14.10 white
    27184 
    27185 > color #14.10/a:2552 pale violet red
    27186 
    27187 > color #14.10/a:2553 khaki
    27188 
    27189 > color #14.10/a:2554 green yellow
    27190 
    27191 > color #14.10/a:2555 aquamarine
    27192 
    27193 > color #14.10/a:2556 steel blue
    27194 
    27195 > color #14.10/Y orchid
    27196 
    27197 > color #14.10/a:1955 pale green
    27198 
    27199 > color #14.10/a:2581 teal
    27200 
    27201 > color #14.10/a:2582 royal blue
    27202 
    27203 > color #14.10/a:2583 medium purple
    27204 
    27205 > color #14.10 white target c
    27206 
    27207 > name to_cartoon #14.10/a:2549-2559
    27208 
    27209 > name to_show #14.10/a:1955,2549-2559,2581-2584/Y:73-76
    27210 
    27211 > cartoon to_cartoon
    27212 
    27213 > show to_show
    27214 
    27215 > hide #14.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27216 
    27217 > hbonds to_show restrict to_show color yellow
    27218 
    27219 17 hydrogen bonds found 
    27220 
    27221 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J53_c0.png height 200 width
    27222 > 200 supersample 3
    27223 
    27224 > hide #!14.10 models
    27225 
    27226 > show #!14.1 models
    27227 
    27228 > hide #14.1
    27229 
    27230 > ~cartoon #14.1
    27231 
    27232 > color #14.1 white
    27233 
    27234 > color #14.1/a:2552 pale violet red
    27235 
    27236 > color #14.1/a:2553 khaki
    27237 
    27238 > color #14.1/a:2554 green yellow
    27239 
    27240 > color #14.1/a:2555 aquamarine
    27241 
    27242 > color #14.1/a:2556 steel blue
    27243 
    27244 > color #14.1/Y orchid
    27245 
    27246 > color #14.1/a:1955 pale green
    27247 
    27248 > color #14.1/a:2581 teal
    27249 
    27250 > color #14.1/a:2582 royal blue
    27251 
    27252 > color #14.1/a:2583 medium purple
    27253 
    27254 > color #14.1 white target c
    27255 
    27256 > name to_cartoon #14.1/a:2549-2559
    27257 
    27258 > name to_show #14.1/a:1955,2549-2559,2581-2584/Y:73-76
    27259 
    27260 > cartoon to_cartoon
    27261 
    27262 > show to_show
    27263 
    27264 > hide #14.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27265 
    27266 > hbonds to_show restrict to_show color yellow
    27267 
    27268 18 hydrogen bonds found 
    27269 
    27270 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J54_c1.png height 200 width
    27271 > 200 supersample 3
    27272 
    27273 > hide #!14.1 models
    27274 
    27275 > show #!14.2 models
    27276 
    27277 > hide #14.2
    27278 
    27279 > ~cartoon #14.2
    27280 
    27281 > color #14.2 white
    27282 
    27283 > color #14.2/a:2552 pale violet red
    27284 
    27285 > color #14.2/a:2553 khaki
    27286 
    27287 > color #14.2/a:2554 green yellow
    27288 
    27289 > color #14.2/a:2555 aquamarine
    27290 
    27291 > color #14.2/a:2556 steel blue
    27292 
    27293 > color #14.2/Y orchid
    27294 
    27295 > color #14.2/a:1955 pale green
    27296 
    27297 > color #14.2/a:2581 teal
    27298 
    27299 > color #14.2/a:2582 royal blue
    27300 
    27301 > color #14.2/a:2583 medium purple
    27302 
    27303 > color #14.2 white target c
    27304 
    27305 > name to_cartoon #14.2/a:2549-2559
    27306 
    27307 > name to_show #14.2/a:1955,2549-2559,2581-2584/Y:73-76
    27308 
    27309 > cartoon to_cartoon
    27310 
    27311 > show to_show
    27312 
    27313 > hide #14.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27314 
    27315 > hbonds to_show restrict to_show color yellow
    27316 
    27317 18 hydrogen bonds found 
    27318 
    27319 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J55_c2.png height 200 width
    27320 > 200 supersample 3
    27321 
    27322 > hide #!14.2 models
    27323 
    27324 > show #!14.3 models
    27325 
    27326 > hide #14.3
    27327 
    27328 > ~cartoon #14.3
    27329 
    27330 > color #14.3 white
    27331 
    27332 > color #14.3/a:2552 pale violet red
    27333 
    27334 > color #14.3/a:2553 khaki
    27335 
    27336 > color #14.3/a:2554 green yellow
    27337 
    27338 > color #14.3/a:2555 aquamarine
    27339 
    27340 > color #14.3/a:2556 steel blue
    27341 
    27342 > color #14.3/Y orchid
    27343 
    27344 > color #14.3/a:1955 pale green
    27345 
    27346 > color #14.3/a:2581 teal
    27347 
    27348 > color #14.3/a:2582 royal blue
    27349 
    27350 > color #14.3/a:2583 medium purple
    27351 
    27352 > color #14.3 white target c
    27353 
    27354 > name to_cartoon #14.3/a:2549-2559
    27355 
    27356 > name to_show #14.3/a:1955,2549-2559,2581-2584/Y:73-76
    27357 
    27358 > cartoon to_cartoon
    27359 
    27360 > show to_show
    27361 
    27362 > hide #14.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27363 
    27364 > hbonds to_show restrict to_show color yellow
    27365 
    27366 24 hydrogen bonds found 
    27367 
    27368 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J56_c3.png height 200 width
    27369 > 200 supersample 3
    27370 
    27371 > hide #!14.3 models
    27372 
    27373 > show #!14.4 models
    27374 
    27375 > hide #14.4
    27376 
    27377 > ~cartoon #14.4
    27378 
    27379 > color #14.4 white
    27380 
    27381 > color #14.4/a:2552 pale violet red
    27382 
    27383 > color #14.4/a:2553 khaki
    27384 
    27385 > color #14.4/a:2554 green yellow
    27386 
    27387 > color #14.4/a:2555 aquamarine
    27388 
    27389 > color #14.4/a:2556 steel blue
    27390 
    27391 > color #14.4/Y orchid
    27392 
    27393 > color #14.4/a:1955 pale green
    27394 
    27395 > color #14.4/a:2581 teal
    27396 
    27397 > color #14.4/a:2582 royal blue
    27398 
    27399 > color #14.4/a:2583 medium purple
    27400 
    27401 > color #14.4 white target c
    27402 
    27403 > name to_cartoon #14.4/a:2549-2559
    27404 
    27405 > name to_show #14.4/a:1955,2549-2559,2581-2584/Y:73-76
    27406 
    27407 > cartoon to_cartoon
    27408 
    27409 > show to_show
    27410 
    27411 > hide #14.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27412 
    27413 > hbonds to_show restrict to_show color yellow
    27414 
    27415 17 hydrogen bonds found 
    27416 
    27417 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J57_c4.png height 200 width
    27418 > 200 supersample 3
    27419 
    27420 > hide #!14.4 models
    27421 
    27422 > show #!14.5 models
    27423 
    27424 > hide #14.5
    27425 
    27426 > ~cartoon #14.5
    27427 
    27428 > color #14.5 white
    27429 
    27430 > color #14.5/a:2552 pale violet red
    27431 
    27432 > color #14.5/a:2553 khaki
    27433 
    27434 > color #14.5/a:2554 green yellow
    27435 
    27436 > color #14.5/a:2555 aquamarine
    27437 
    27438 > color #14.5/a:2556 steel blue
    27439 
    27440 > color #14.5/Y orchid
    27441 
    27442 > color #14.5/a:1955 pale green
    27443 
    27444 > color #14.5/a:2581 teal
    27445 
    27446 > color #14.5/a:2582 royal blue
    27447 
    27448 > color #14.5/a:2583 medium purple
    27449 
    27450 > color #14.5 white target c
    27451 
    27452 > name to_cartoon #14.5/a:2549-2559
    27453 
    27454 > name to_show #14.5/a:1955,2549-2559,2581-2584/Y:73-76
    27455 
    27456 > cartoon to_cartoon
    27457 
    27458 > show to_show
    27459 
    27460 > hide #14.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27461 
    27462 > hbonds to_show restrict to_show color yellow
    27463 
    27464 16 hydrogen bonds found 
    27465 
    27466 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J58_c5.png height 200 width
    27467 > 200 supersample 3
    27468 
    27469 > hide #!14.5 models
    27470 
    27471 > show #!14.6 models
    27472 
    27473 > hide #14.6
    27474 
    27475 > ~cartoon #14.6
    27476 
    27477 > color #14.6 white
    27478 
    27479 > color #14.6/a:2552 pale violet red
    27480 
    27481 > color #14.6/a:2553 khaki
    27482 
    27483 > color #14.6/a:2554 green yellow
    27484 
    27485 > color #14.6/a:2555 aquamarine
    27486 
    27487 > color #14.6/a:2556 steel blue
    27488 
    27489 > color #14.6/Y orchid
    27490 
    27491 > color #14.6/a:1955 pale green
    27492 
    27493 > color #14.6/a:2581 teal
    27494 
    27495 > color #14.6/a:2582 royal blue
    27496 
    27497 > color #14.6/a:2583 medium purple
    27498 
    27499 > color #14.6 white target c
    27500 
    27501 > name to_cartoon #14.6/a:2549-2559
    27502 
    27503 > name to_show #14.6/a:1955,2549-2559,2581-2584/Y:73-76
    27504 
    27505 > cartoon to_cartoon
    27506 
    27507 > show to_show
    27508 
    27509 > hide #14.6/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27510 
    27511 > hbonds to_show restrict to_show color yellow
    27512 
    27513 20 hydrogen bonds found 
    27514 
    27515 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J59_c6.png height 200 width
    27516 > 200 supersample 3
    27517 
    27518 > hide #!14.6 models
    27519 
    27520 > show #!14.7 models
    27521 
    27522 > hide #14.7
    27523 
    27524 > ~cartoon #14.7
    27525 
    27526 > color #14.7 white
    27527 
    27528 > color #14.7/a:2552 pale violet red
    27529 
    27530 > color #14.7/a:2553 khaki
    27531 
    27532 > color #14.7/a:2554 green yellow
    27533 
    27534 > color #14.7/a:2555 aquamarine
    27535 
    27536 > color #14.7/a:2556 steel blue
    27537 
    27538 > color #14.7/Y orchid
    27539 
    27540 > color #14.7/a:1955 pale green
    27541 
    27542 > color #14.7/a:2581 teal
    27543 
    27544 > color #14.7/a:2582 royal blue
    27545 
    27546 > color #14.7/a:2583 medium purple
    27547 
    27548 > color #14.7 white target c
    27549 
    27550 > name to_cartoon #14.7/a:2549-2559
    27551 
    27552 > name to_show #14.7/a:1955,2549-2559,2581-2584/Y:73-76
    27553 
    27554 > cartoon to_cartoon
    27555 
    27556 > show to_show
    27557 
    27558 > hide #14.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27559 
    27560 > hbonds to_show restrict to_show color yellow
    27561 
    27562 22 hydrogen bonds found 
    27563 
    27564 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J60_c7.png height 200 width
    27565 > 200 supersample 3
    27566 
    27567 > hide #!14.7 models
    27568 
    27569 > show #!14.8 models
    27570 
    27571 > hide #14.8
    27572 
    27573 > ~cartoon #14.8
    27574 
    27575 > color #14.8 white
    27576 
    27577 > color #14.8/a:2552 pale violet red
    27578 
    27579 > color #14.8/a:2553 khaki
    27580 
    27581 > color #14.8/a:2554 green yellow
    27582 
    27583 > color #14.8/a:2555 aquamarine
    27584 
    27585 > color #14.8/a:2556 steel blue
    27586 
    27587 > color #14.8/Y orchid
    27588 
    27589 > color #14.8/a:1955 pale green
    27590 
    27591 > color #14.8/a:2581 teal
    27592 
    27593 > color #14.8/a:2582 royal blue
    27594 
    27595 > color #14.8/a:2583 medium purple
    27596 
    27597 > color #14.8 white target c
    27598 
    27599 > name to_cartoon #14.8/a:2549-2559
    27600 
    27601 > name to_show #14.8/a:1955,2549-2559,2581-2584/Y:73-76
    27602 
    27603 > cartoon to_cartoon
    27604 
    27605 > show to_show
    27606 
    27607 > hide #14.8/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27608 
    27609 > hbonds to_show restrict to_show color yellow
    27610 
    27611 21 hydrogen bonds found 
    27612 
    27613 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J61_c8.png height 200 width
    27614 > 200 supersample 3
    27615 
    27616 > hide #!14.8 models
    27617 
    27618 > show #!14.9 models
    27619 
    27620 > hide #14.9
    27621 
    27622 > ~cartoon #14.9
    27623 
    27624 > color #14.9 white
    27625 
    27626 > color #14.9/a:2552 pale violet red
    27627 
    27628 > color #14.9/a:2553 khaki
    27629 
    27630 > color #14.9/a:2554 green yellow
    27631 
    27632 > color #14.9/a:2555 aquamarine
    27633 
    27634 > color #14.9/a:2556 steel blue
    27635 
    27636 > color #14.9/Y orchid
    27637 
    27638 > color #14.9/a:1955 pale green
    27639 
    27640 > color #14.9/a:2581 teal
    27641 
    27642 > color #14.9/a:2582 royal blue
    27643 
    27644 > color #14.9/a:2583 medium purple
    27645 
    27646 > color #14.9 white target c
    27647 
    27648 > name to_cartoon #14.9/a:2549-2559
    27649 
    27650 > name to_show #14.9/a:1955,2549-2559,2581-2584/Y:73-76
    27651 
    27652 > cartoon to_cartoon
    27653 
    27654 > show to_show
    27655 
    27656 > hide #14.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27657 
    27658 > hbonds to_show restrict to_show color yellow
    27659 
    27660 27 hydrogen bonds found 
    27661 
    27662 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J62_c9.png height 200 width
    27663 > 200 supersample 3
    27664 
    27665 > hide #!14.9 models
    27666 
    27667 > show #!22.1 models
    27668 
    27669 > hide #22.1
    27670 
    27671 > ~cartoon #22.1
    27672 
    27673 > color #22.1 white
    27674 
    27675 > color #22.1/a:2552 pale violet red
    27676 
    27677 > color #22.1/a:2553 khaki
    27678 
    27679 > color #22.1/a:2554 green yellow
    27680 
    27681 > color #22.1/a:2555 aquamarine
    27682 
    27683 > color #22.1/a:2556 steel blue
    27684 
    27685 > color #22.1/Y orchid
    27686 
    27687 > color #22.1/a:1955 pale green
    27688 
    27689 > color #22.1/a:2581 teal
    27690 
    27691 > color #22.1/a:2582 royal blue
    27692 
    27693 > color #22.1/a:2583 medium purple
    27694 
    27695 > color #22.1 white target c
    27696 
    27697 > name to_cartoon #22.1/a:2549-2559
    27698 
    27699 > name to_show #22.1/a:1955,2549-2559,2581-2584/Y:73-76
    27700 
    27701 > cartoon to_cartoon
    27702 
    27703 > show to_show
    27704 
    27705 > hide #22.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27706 
    27707 > hbonds to_show restrict to_show color yellow
    27708 
    27709 24 hydrogen bonds found 
    27710 
    27711 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J111_ape.png height 200 width
    27712 > 200 supersample 3
    27713 
    27714 > hide #!22.1 models
    27715 
    27716 > show #!22.2 models
    27717 
    27718 > hide #22.2
    27719 
    27720 > ~cartoon #22.2
    27721 
    27722 > color #22.2 white
    27723 
    27724 > color #22.2/a:2552 pale violet red
    27725 
    27726 > color #22.2/a:2553 khaki
    27727 
    27728 > color #22.2/a:2554 green yellow
    27729 
    27730 > color #22.2/a:2555 aquamarine
    27731 
    27732 > color #22.2/a:2556 steel blue
    27733 
    27734 > color #22.2/Y orchid
    27735 
    27736 > color #22.2/a:1955 pale green
    27737 
    27738 > color #22.2/a:2581 teal
    27739 
    27740 > color #22.2/a:2582 royal blue
    27741 
    27742 > color #22.2/a:2583 medium purple
    27743 
    27744 > color #22.2 white target c
    27745 
    27746 > name to_cartoon #22.2/a:2549-2559
    27747 
    27748 > name to_show #22.2/a:1955,2549-2559,2581-2584/Y:73-76
    27749 
    27750 > cartoon to_cartoon
    27751 
    27752 > show to_show
    27753 
    27754 > hide #22.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27755 
    27756 > hbonds to_show restrict to_show color yellow
    27757 
    27758 25 hydrogen bonds found 
    27759 
    27760 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J112_ap.png height 200 width
    27761 > 200 supersample 3
    27762 
    27763 > hide #!22.2 models
    27764 
    27765 > show #!22.3 models
    27766 
    27767 > hide #22.3
    27768 
    27769 > ~cartoon #22.3
    27770 
    27771 > color #22.3 white
    27772 
    27773 > color #22.3/a:2552 pale violet red
    27774 
    27775 > color #22.3/a:2553 khaki
    27776 
    27777 > color #22.3/a:2554 green yellow
    27778 
    27779 > color #22.3/a:2555 aquamarine
    27780 
    27781 > color #22.3/a:2556 steel blue
    27782 
    27783 > color #22.3/Y orchid
    27784 
    27785 > color #22.3/a:1955 pale green
    27786 
    27787 > color #22.3/a:2581 teal
    27788 
    27789 > color #22.3/a:2582 royal blue
    27790 
    27791 > color #22.3/a:2583 medium purple
    27792 
    27793 > color #22.3 white target c
    27794 
    27795 > name to_cartoon #22.3/a:2549-2559
    27796 
    27797 > name to_show #22.3/a:1955,2549-2559,2581-2584/Y:73-76
    27798 
    27799 > cartoon to_cartoon
    27800 
    27801 > show to_show
    27802 
    27803 > hide #22.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27804 
    27805 > hbonds to_show restrict to_show color yellow
    27806 
    27807 16 hydrogen bonds found 
    27808 
    27809 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J113_pe.png height 200 width
    27810 > 200 supersample 3
    27811 
    27812 > hide #!22.3 models
    27813 
    27814 > show #!22.4 models
    27815 
    27816 > hide #22.4
    27817 
    27818 > ~cartoon #22.4
    27819 
    27820 > color #22.4 white
    27821 
    27822 > color #22.4/a:2552 pale violet red
    27823 
    27824 > color #22.4/a:2553 khaki
    27825 
    27826 > color #22.4/a:2554 green yellow
    27827 
    27828 > color #22.4/a:2555 aquamarine
    27829 
    27830 > color #22.4/a:2556 steel blue
    27831 
    27832 > color #22.4/Y orchid
    27833 
    27834 > color #22.4/a:1955 pale green
    27835 
    27836 > color #22.4/a:2581 teal
    27837 
    27838 > color #22.4/a:2582 royal blue
    27839 
    27840 > color #22.4/a:2583 medium purple
    27841 
    27842 > color #22.4 white target c
    27843 
    27844 > name to_cartoon #22.4/a:2549-2559
    27845 
    27846 > name to_show #22.4/a:1955,2549-2559,2581-2584/Y:73-76
    27847 
    27848 > cartoon to_cartoon
    27849 
    27850 > show to_show
    27851 
    27852 > hide #22.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27853 
    27854 > hbonds to_show restrict to_show color yellow
    27855 
    27856 18 hydrogen bonds found 
    27857 
    27858 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J124_e.png height 200 width
    27859 > 200 supersample 3
    27860 
    27861 > hide #!22.4 models
    27862 
    27863 > graphics quality 1
    27864 
    27865 > graphics silhouettes false
    27866 
    27867 > show #!1.2 models
    27868 
    27869 > hide #1.2
    27870 
    27871 > ~cartoon #1.2
    27872 
    27873 > color #1.2 white
    27874 
    27875 > color #1.2/a:2552 pale violet red
    27876 
    27877 > color #1.2/a:2553 khaki
    27878 
    27879 > color #1.2/a:2554 green yellow
    27880 
    27881 > color #1.2/a:2555 aquamarine
    27882 
    27883 > color #1.2/a:2556 steel blue
    27884 
    27885 > color #1.2/Y orchid
    27886 
    27887 > color #1.2/a:1955 pale green
    27888 
    27889 > color #1.2/a:2581 teal
    27890 
    27891 > color #1.2/a:2582 royal blue
    27892 
    27893 > color #1.2/a:2583 medium purple
    27894 
    27895 > color #1.2 white target c
    27896 
    27897 > name to_cartoon #1.2/a:2549-2559
    27898 
    27899 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    27900 
    27901 > cartoon to_cartoon
    27902 
    27903 > show to_show
    27904 
    27905 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27906 
    27907 > hbonds to_show restrict to_show color yellow
    27908 
    27909 24 hydrogen bonds found 
    27910 
    27911 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 200 width 200
    27912 > supersample 3
    27913 
    27914 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    27915 
    27916 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 200 width 200
    27917 > supersample 3
    27918 
    27919 > hide #!1.2 models
    27920 
    27921 > show #!1.7 models
    27922 
    27923 > hide #1.7
    27924 
    27925 > ~cartoon #1.7
    27926 
    27927 > color #1.7 white
    27928 
    27929 > color #1.7/a:2552 pale violet red
    27930 
    27931 > color #1.7/a:2553 khaki
    27932 
    27933 > color #1.7/a:2554 green yellow
    27934 
    27935 > color #1.7/a:2555 aquamarine
    27936 
    27937 > color #1.7/a:2556 steel blue
    27938 
    27939 > color #1.7/Y orchid
    27940 
    27941 > color #1.7/a:1955 pale green
    27942 
    27943 > color #1.7/a:2581 teal
    27944 
    27945 > color #1.7/a:2582 royal blue
    27946 
    27947 > color #1.7/a:2583 medium purple
    27948 
    27949 > color #1.7 white target c
    27950 
    27951 > name to_cartoon #1.7/a:2549-2559
    27952 
    27953 > name to_show #1.7/a:1955,2549-2559,2581-2584/Y:73-76
    27954 
    27955 > cartoon to_cartoon
    27956 
    27957 > show to_show
    27958 
    27959 > hide #1.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    27960 
    27961 > hbonds to_show restrict to_show color yellow
    27962 
    27963 16 hydrogen bonds found 
    27964 
    27965 > save /Users/dalar193/Desktop/A_loop/A_loop_8cgk.png height 200 width 200
    27966 > supersample 3
    27967 
    27968 > hide #!1.7 models
    27969 
    27970 > show #!1.9 models
    27971 
    27972 > hide #1.9
    27973 
    27974 > ~cartoon #1.9
    27975 
    27976 > color #1.9 white
    27977 
    27978 > color #1.9/A:2552 pale violet red
    27979 
    27980 > color #1.9/A:2553 khaki
    27981 
    27982 > color #1.9/A:2554 green yellow
    27983 
    27984 > color #1.9/A:2555 aquamarine
    27985 
    27986 > color #1.9/A:2556 steel blue
    27987 
    27988 > color #1.9/Y orchid
    27989 
    27990 > color #1.9/A:1955 pale green
    27991 
    27992 > color #1.9/A:2581 teal
    27993 
    27994 > color #1.9/A:2582 royal blue
    27995 
    27996 > color #1.9/A:2583 medium purple
    27997 
    27998 > color #1.9 white target c
    27999 
    28000 > name to_cartoon #1.9/A:2549-2559
    28001 
    28002 > name to_show #1.9/A:1955,2549-2559,2581-2584/Y:73-76
    28003 
    28004 > cartoon to_cartoon
    28005 
    28006 > show to_show
    28007 
    28008 > hide #1.9/A:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28009 
    28010 > hbonds to_show restrict to_show color yellow
    28011 
    28012 25 hydrogen bonds found 
    28013 
    28014 > save /Users/dalar193/Desktop/A_loop/A_loop_7bv8.png height 200 width 200
    28015 > supersample 3
    28016 
    28017 > hide #!1.9 models
    28018 
    28019 > show #!1.11 models
    28020 
    28021 > hide #1.11
    28022 
    28023 > ~cartoon #1.11
    28024 
    28025 > color #1.11 white
    28026 
    28027 > color #1.11/BA:2552 pale violet red
    28028 
    28029 > color #1.11/BA:2553 khaki
    28030 
    28031 > color #1.11/BA:2554 green yellow
    28032 
    28033 > color #1.11/BA:2555 aquamarine
    28034 
    28035 > color #1.11/BA:2556 steel blue
    28036 
    28037 > color #1.11/Y orchid
    28038 
    28039 > color #1.11/BA:1955 pale green
    28040 
    28041 > color #1.11/BA:2581 teal
    28042 
    28043 > color #1.11/BA:2582 royal blue
    28044 
    28045 > color #1.11/BA:2583 medium purple
    28046 
    28047 > color #1.11 white target c
    28048 
    28049 > name to_cartoon #1.11/BA:2549-2559
    28050 
    28051 > name to_show #1.11/BA:1955,2549-2559,2581-2584/Y:73-76
    28052 
    28053 > cartoon to_cartoon
    28054 
    28055 > show to_show
    28056 
    28057 > hide #1.11/BA:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28058 
    28059 > hbonds to_show restrict to_show color yellow
    28060 
    28061 17 hydrogen bonds found 
    28062 
    28063 > save /Users/dalar193/Desktop/A_loop/A_loop_7o1a.png height 200 width 200
    28064 > supersample 3
    28065 
    28066 > hide #!1.11 models
    28067 
    28068 > show #!6.10 models
    28069 
    28070 > hide #6.10
    28071 
    28072 > ~cartoon #6.10
    28073 
    28074 > color #6.10 white
    28075 
    28076 > color #6.10/a:2552 pale violet red
    28077 
    28078 > color #6.10/a:2553 khaki
    28079 
    28080 > color #6.10/a:2554 green yellow
    28081 
    28082 > color #6.10/a:2555 aquamarine
    28083 
    28084 > color #6.10/a:2556 steel blue
    28085 
    28086 > color #6.10/Y orchid
    28087 
    28088 > color #6.10/a:1955 pale green
    28089 
    28090 > color #6.10/a:2581 teal
    28091 
    28092 > color #6.10/a:2582 royal blue
    28093 
    28094 > color #6.10/a:2583 medium purple
    28095 
    28096 > color #6.10 white target c
    28097 
    28098 > name to_cartoon #6.10/a:2549-2559
    28099 
    28100 > name to_show #6.10/a:1955,2549-2559,2581-2584/Y:73-76
    28101 
    28102 > cartoon to_cartoon
    28103 
    28104 > show to_show
    28105 
    28106 > hide #6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28107 
    28108 > hbonds to_show restrict to_show color yellow
    28109 
    28110 16 hydrogen bonds found 
    28111 
    28112 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J83_cl0.png height 200 width
    28113 > 200 supersample 3
    28114 
    28115 > hide #!6.10 models
    28116 
    28117 > show #!6.1 models
    28118 
    28119 > hide #6.1
    28120 
    28121 > ~cartoon #6.1
    28122 
    28123 > color #6.1 white
    28124 
    28125 > color #6.1/a:2552 pale violet red
    28126 
    28127 > color #6.1/a:2553 khaki
    28128 
    28129 > color #6.1/a:2554 green yellow
    28130 
    28131 > color #6.1/a:2555 aquamarine
    28132 
    28133 > color #6.1/a:2556 steel blue
    28134 
    28135 > color #6.1/Y orchid
    28136 
    28137 > color #6.1/a:1955 pale green
    28138 
    28139 > color #6.1/a:2581 teal
    28140 
    28141 > color #6.1/a:2582 royal blue
    28142 
    28143 > color #6.1/a:2583 medium purple
    28144 
    28145 > color #6.1 white target c
    28146 
    28147 > name to_cartoon #6.1/a:2549-2559
    28148 
    28149 > name to_show #6.1/a:1955,2549-2559,2581-2584/Y:73-76
    28150 
    28151 > cartoon to_cartoon
    28152 
    28153 > show to_show
    28154 
    28155 > hide #6.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28156 
    28157 > hbonds to_show restrict to_show color yellow
    28158 
    28159 19 hydrogen bonds found 
    28160 
    28161 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J84_cl1.png height 200 width
    28162 > 200 supersample 3
    28163 
    28164 > hide #!6.1 models
    28165 
    28166 > show #!6.2 models
    28167 
    28168 > hide #6.2
    28169 
    28170 > ~cartoon #6.2
    28171 
    28172 > color #6.2 white
    28173 
    28174 > color #6.2/a:2552 pale violet red
    28175 
    28176 > color #6.2/a:2553 khaki
    28177 
    28178 > color #6.2/a:2554 green yellow
    28179 
    28180 > color #6.2/a:2555 aquamarine
    28181 
    28182 > color #6.2/a:2556 steel blue
    28183 
    28184 > color #6.2/Y orchid
    28185 
    28186 > color #6.2/a:1955 pale green
    28187 
    28188 > color #6.2/a:2581 teal
    28189 
    28190 > color #6.2/a:2582 royal blue
    28191 
    28192 > color #6.2/a:2583 medium purple
    28193 
    28194 > color #6.2 white target c
    28195 
    28196 > name to_cartoon #6.2/a:2549-2559
    28197 
    28198 > name to_show #6.2/a:1955,2549-2559,2581-2584/Y:73-76
    28199 
    28200 > cartoon to_cartoon
    28201 
    28202 > show to_show
    28203 
    28204 > hide #6.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28205 
    28206 > hbonds to_show restrict to_show color yellow
    28207 
    28208 23 hydrogen bonds found 
    28209 
    28210 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J85_cl2.png height 200 width
    28211 > 200 supersample 3
    28212 
    28213 > hide #!6.2 models
    28214 
    28215 > show #!6.3 models
    28216 
    28217 > hide #6.3
    28218 
    28219 > ~cartoon #6.3
    28220 
    28221 > color #6.3 white
    28222 
    28223 > color #6.3/a:2552 pale violet red
    28224 
    28225 > color #6.3/a:2553 khaki
    28226 
    28227 > color #6.3/a:2554 green yellow
    28228 
    28229 > color #6.3/a:2555 aquamarine
    28230 
    28231 > color #6.3/a:2556 steel blue
    28232 
    28233 > color #6.3/Y orchid
    28234 
    28235 > color #6.3/a:1955 pale green
    28236 
    28237 > color #6.3/a:2581 teal
    28238 
    28239 > color #6.3/a:2582 royal blue
    28240 
    28241 > color #6.3/a:2583 medium purple
    28242 
    28243 > color #6.3 white target c
    28244 
    28245 > name to_cartoon #6.3/a:2549-2559
    28246 
    28247 > name to_show #6.3/a:1955,2549-2559,2581-2584/Y:73-76
    28248 
    28249 > cartoon to_cartoon
    28250 
    28251 > show to_show
    28252 
    28253 > hide #6.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28254 
    28255 > hbonds to_show restrict to_show color yellow
    28256 
    28257 16 hydrogen bonds found 
    28258 
    28259 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J86_cl3.png height 200 width
    28260 > 200 supersample 3
    28261 
    28262 > hide #!6.3 models
    28263 
    28264 > show #!6.4 models
    28265 
    28266 > hide #6.4
    28267 
    28268 > ~cartoon #6.4
    28269 
    28270 > color #6.4 white
    28271 
    28272 > color #6.4/a:2552 pale violet red
    28273 
    28274 > color #6.4/a:2553 khaki
    28275 
    28276 > color #6.4/a:2554 green yellow
    28277 
    28278 > color #6.4/a:2555 aquamarine
    28279 
    28280 > color #6.4/a:2556 steel blue
    28281 
    28282 > color #6.4/Y orchid
    28283 
    28284 > color #6.4/a:1955 pale green
    28285 
    28286 > color #6.4/a:2581 teal
    28287 
    28288 > color #6.4/a:2582 royal blue
    28289 
    28290 > color #6.4/a:2583 medium purple
    28291 
    28292 > color #6.4 white target c
    28293 
    28294 > name to_cartoon #6.4/a:2549-2559
    28295 
    28296 > name to_show #6.4/a:1955,2549-2559,2581-2584/Y:73-76
    28297 
    28298 > cartoon to_cartoon
    28299 
    28300 > show to_show
    28301 
    28302 > hide #6.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28303 
    28304 > hbonds to_show restrict to_show color yellow
    28305 
    28306 22 hydrogen bonds found 
    28307 
    28308 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J87_cl4.png height 200 width
    28309 > 200 supersample 3
    28310 
    28311 > hide #!6.4 models
    28312 
    28313 > show #!6.5 models
    28314 
    28315 > hide #6.5
    28316 
    28317 > ~cartoon #6.5
    28318 
    28319 > color #6.5 white
    28320 
    28321 > color #6.5/a:2552 pale violet red
    28322 
    28323 > color #6.5/a:2553 khaki
    28324 
    28325 > color #6.5/a:2554 green yellow
    28326 
    28327 > color #6.5/a:2555 aquamarine
    28328 
    28329 > color #6.5/a:2556 steel blue
    28330 
    28331 > color #6.5/Y orchid
    28332 
    28333 > color #6.5/a:1955 pale green
    28334 
    28335 > color #6.5/a:2581 teal
    28336 
    28337 > color #6.5/a:2582 royal blue
    28338 
    28339 > color #6.5/a:2583 medium purple
    28340 
    28341 > color #6.5 white target c
    28342 
    28343 > name to_cartoon #6.5/a:2549-2559
    28344 
    28345 > name to_show #6.5/a:1955,2549-2559,2581-2584/Y:73-76
    28346 
    28347 > cartoon to_cartoon
    28348 
    28349 > show to_show
    28350 
    28351 > hide #6.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28352 
    28353 > hbonds to_show restrict to_show color yellow
    28354 
    28355 16 hydrogen bonds found 
    28356 
    28357 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J88_cl5.png height 200 width
    28358 > 200 supersample 3
    28359 
    28360 > hide #!6.5 models
    28361 
    28362 > show #!6.6 models
    28363 
    28364 > hide #6.6
    28365 
    28366 > ~cartoon #6.6
    28367 
    28368 > color #6.6 white
    28369 
    28370 > color #6.6/a:2552 pale violet red
    28371 
    28372 > color #6.6/a:2553 khaki
    28373 
    28374 > color #6.6/a:2554 green yellow
    28375 
    28376 > color #6.6/a:2555 aquamarine
    28377 
    28378 > color #6.6/a:2556 steel blue
    28379 
    28380 > color #6.6/Y orchid
    28381 
    28382 > color #6.6/a:1955 pale green
    28383 
    28384 > color #6.6/a:2581 teal
    28385 
    28386 > color #6.6/a:2582 royal blue
    28387 
    28388 > color #6.6/a:2583 medium purple
    28389 
    28390 > color #6.6 white target c
    28391 
    28392 > name to_cartoon #6.6/a:2549-2559
    28393 
    28394 > name to_show #6.6/a:1955,2549-2559,2581-2584/Y:73-76
    28395 
    28396 > cartoon to_cartoon
    28397 
    28398 > show to_show
    28399 
    28400 > hide #6.6/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28401 
    28402 > hbonds to_show restrict to_show color yellow
    28403 
    28404 22 hydrogen bonds found 
    28405 
    28406 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J89_cl6.png height 200 width
    28407 > 200 supersample 3
    28408 
    28409 > hide #!6.6 models
    28410 
    28411 > show #!6.7 models
    28412 
    28413 > hide #6.7
    28414 
    28415 > ~cartoon #6.7
    28416 
    28417 > color #6.7 white
    28418 
    28419 > color #6.7/a:2552 pale violet red
    28420 
    28421 > color #6.7/a:2553 khaki
    28422 
    28423 > color #6.7/a:2554 green yellow
    28424 
    28425 > color #6.7/a:2555 aquamarine
    28426 
    28427 > color #6.7/a:2556 steel blue
    28428 
    28429 > color #6.7/Y orchid
    28430 
    28431 > color #6.7/a:1955 pale green
    28432 
    28433 > color #6.7/a:2581 teal
    28434 
    28435 > color #6.7/a:2582 royal blue
    28436 
    28437 > color #6.7/a:2583 medium purple
    28438 
    28439 > color #6.7 white target c
    28440 
    28441 > name to_cartoon #6.7/a:2549-2559
    28442 
    28443 > name to_show #6.7/a:1955,2549-2559,2581-2584/Y:73-76
    28444 
    28445 > cartoon to_cartoon
    28446 
    28447 > show to_show
    28448 
    28449 > hide #6.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28450 
    28451 > hbonds to_show restrict to_show color yellow
    28452 
    28453 20 hydrogen bonds found 
    28454 
    28455 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J90_cl7.png height 200 width
    28456 > 200 supersample 3
    28457 
    28458 > hide #!6.7 models
    28459 
    28460 > show #!6.8 models
    28461 
    28462 > hide #6.8
    28463 
    28464 > ~cartoon #6.8
    28465 
    28466 > color #6.8 white
    28467 
    28468 > color #6.8/a:2552 pale violet red
    28469 
    28470 > color #6.8/a:2553 khaki
    28471 
    28472 > color #6.8/a:2554 green yellow
    28473 
    28474 > color #6.8/a:2555 aquamarine
    28475 
    28476 > color #6.8/a:2556 steel blue
    28477 
    28478 > color #6.8/Y orchid
    28479 
    28480 > color #6.8/a:1955 pale green
    28481 
    28482 > color #6.8/a:2581 teal
    28483 
    28484 > color #6.8/a:2582 royal blue
    28485 
    28486 > color #6.8/a:2583 medium purple
    28487 
    28488 > color #6.8 white target c
    28489 
    28490 > name to_cartoon #6.8/a:2549-2559
    28491 
    28492 > name to_show #6.8/a:1955,2549-2559,2581-2584/Y:73-76
    28493 
    28494 > cartoon to_cartoon
    28495 
    28496 > show to_show
    28497 
    28498 > hide #6.8/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28499 
    28500 > hbonds to_show restrict to_show color yellow
    28501 
    28502 15 hydrogen bonds found 
    28503 
    28504 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J91_cl8.png height 200 width
    28505 > 200 supersample 3
    28506 
    28507 > hide #!6.8 models
    28508 
    28509 > show #!6.9 models
    28510 
    28511 > hide #6.9
    28512 
    28513 > ~cartoon #6.9
    28514 
    28515 > color #6.9 white
    28516 
    28517 > color #6.9/a:2552 pale violet red
    28518 
    28519 > color #6.9/a:2553 khaki
    28520 
    28521 > color #6.9/a:2554 green yellow
    28522 
    28523 > color #6.9/a:2555 aquamarine
    28524 
    28525 > color #6.9/a:2556 steel blue
    28526 
    28527 > color #6.9/Y orchid
    28528 
    28529 > color #6.9/a:1955 pale green
    28530 
    28531 > color #6.9/a:2581 teal
    28532 
    28533 > color #6.9/a:2582 royal blue
    28534 
    28535 > color #6.9/a:2583 medium purple
    28536 
    28537 > color #6.9 white target c
    28538 
    28539 > name to_cartoon #6.9/a:2549-2559
    28540 
    28541 > name to_show #6.9/a:1955,2549-2559,2581-2584/Y:73-76
    28542 
    28543 > cartoon to_cartoon
    28544 
    28545 > show to_show
    28546 
    28547 > hide #6.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28548 
    28549 > hbonds to_show restrict to_show color yellow
    28550 
    28551 18 hydrogen bonds found 
    28552 
    28553 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J92_cl9.png height 200 width
    28554 > 200 supersample 3
    28555 
    28556 > hide #!6.9 models
    28557 
    28558 > show #!14.10 models
    28559 
    28560 > hide #14.10
    28561 
    28562 > ~cartoon #14.10
    28563 
    28564 > color #14.10 white
    28565 
    28566 > color #14.10/a:2552 pale violet red
    28567 
    28568 > color #14.10/a:2553 khaki
    28569 
    28570 > color #14.10/a:2554 green yellow
    28571 
    28572 > color #14.10/a:2555 aquamarine
    28573 
    28574 > color #14.10/a:2556 steel blue
    28575 
    28576 > color #14.10/Y orchid
    28577 
    28578 > color #14.10/a:1955 pale green
    28579 
    28580 > color #14.10/a:2581 teal
    28581 
    28582 > color #14.10/a:2582 royal blue
    28583 
    28584 > color #14.10/a:2583 medium purple
    28585 
    28586 > color #14.10 white target c
    28587 
    28588 > name to_cartoon #14.10/a:2549-2559
    28589 
    28590 > name to_show #14.10/a:1955,2549-2559,2581-2584/Y:73-76
    28591 
    28592 > cartoon to_cartoon
    28593 
    28594 > show to_show
    28595 
    28596 > hide #14.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28597 
    28598 > hbonds to_show restrict to_show color yellow
    28599 
    28600 17 hydrogen bonds found 
    28601 
    28602 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J53_c0.png height 200 width
    28603 > 200 supersample 3
    28604 
    28605 > hide #!14.10 models
    28606 
    28607 > show #!14.1 models
    28608 
    28609 > hide #14.1
    28610 
    28611 > ~cartoon #14.1
    28612 
    28613 > color #14.1 white
    28614 
    28615 > color #14.1/a:2552 pale violet red
    28616 
    28617 > color #14.1/a:2553 khaki
    28618 
    28619 > color #14.1/a:2554 green yellow
    28620 
    28621 > color #14.1/a:2555 aquamarine
    28622 
    28623 > color #14.1/a:2556 steel blue
    28624 
    28625 > color #14.1/Y orchid
    28626 
    28627 > color #14.1/a:1955 pale green
    28628 
    28629 > color #14.1/a:2581 teal
    28630 
    28631 > color #14.1/a:2582 royal blue
    28632 
    28633 > color #14.1/a:2583 medium purple
    28634 
    28635 > color #14.1 white target c
    28636 
    28637 > name to_cartoon #14.1/a:2549-2559
    28638 
    28639 > name to_show #14.1/a:1955,2549-2559,2581-2584/Y:73-76
    28640 
    28641 > cartoon to_cartoon
    28642 
    28643 > show to_show
    28644 
    28645 > hide #14.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28646 
    28647 > hbonds to_show restrict to_show color yellow
    28648 
    28649 18 hydrogen bonds found 
    28650 
    28651 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J54_c1.png height 200 width
    28652 > 200 supersample 3
    28653 
    28654 > hide #!14.1 models
    28655 
    28656 > show #!14.2 models
    28657 
    28658 > hide #14.2
    28659 
    28660 > ~cartoon #14.2
    28661 
    28662 > color #14.2 white
    28663 
    28664 > color #14.2/a:2552 pale violet red
    28665 
    28666 > color #14.2/a:2553 khaki
    28667 
    28668 > color #14.2/a:2554 green yellow
    28669 
    28670 > color #14.2/a:2555 aquamarine
    28671 
    28672 > color #14.2/a:2556 steel blue
    28673 
    28674 > color #14.2/Y orchid
    28675 
    28676 > color #14.2/a:1955 pale green
    28677 
    28678 > color #14.2/a:2581 teal
    28679 
    28680 > color #14.2/a:2582 royal blue
    28681 
    28682 > color #14.2/a:2583 medium purple
    28683 
    28684 > color #14.2 white target c
    28685 
    28686 > name to_cartoon #14.2/a:2549-2559
    28687 
    28688 > name to_show #14.2/a:1955,2549-2559,2581-2584/Y:73-76
    28689 
    28690 > cartoon to_cartoon
    28691 
    28692 > show to_show
    28693 
    28694 > hide #14.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28695 
    28696 > hbonds to_show restrict to_show color yellow
    28697 
    28698 18 hydrogen bonds found 
    28699 
    28700 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J55_c2.png height 200 width
    28701 > 200 supersample 3
    28702 
    28703 > hide #!14.2 models
    28704 
    28705 > show #!14.3 models
    28706 
    28707 > hide #14.3
    28708 
    28709 > ~cartoon #14.3
    28710 
    28711 > color #14.3 white
    28712 
    28713 > color #14.3/a:2552 pale violet red
    28714 
    28715 > color #14.3/a:2553 khaki
    28716 
    28717 > color #14.3/a:2554 green yellow
    28718 
    28719 > color #14.3/a:2555 aquamarine
    28720 
    28721 > color #14.3/a:2556 steel blue
    28722 
    28723 > color #14.3/Y orchid
    28724 
    28725 > color #14.3/a:1955 pale green
    28726 
    28727 > color #14.3/a:2581 teal
    28728 
    28729 > color #14.3/a:2582 royal blue
    28730 
    28731 > color #14.3/a:2583 medium purple
    28732 
    28733 > color #14.3 white target c
    28734 
    28735 > name to_cartoon #14.3/a:2549-2559
    28736 
    28737 > name to_show #14.3/a:1955,2549-2559,2581-2584/Y:73-76
    28738 
    28739 > cartoon to_cartoon
    28740 
    28741 > show to_show
    28742 
    28743 > hide #14.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28744 
    28745 > hbonds to_show restrict to_show color yellow
    28746 
    28747 24 hydrogen bonds found 
    28748 
    28749 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J56_c3.png height 200 width
    28750 > 200 supersample 3
    28751 
    28752 > hide #!14.3 models
    28753 
    28754 > show #!14.4 models
    28755 
    28756 > hide #14.4
    28757 
    28758 > ~cartoon #14.4
    28759 
    28760 > color #14.4 white
    28761 
    28762 > color #14.4/a:2552 pale violet red
    28763 
    28764 > color #14.4/a:2553 khaki
    28765 
    28766 > color #14.4/a:2554 green yellow
    28767 
    28768 > color #14.4/a:2555 aquamarine
    28769 
    28770 > color #14.4/a:2556 steel blue
    28771 
    28772 > color #14.4/Y orchid
    28773 
    28774 > color #14.4/a:1955 pale green
    28775 
    28776 > color #14.4/a:2581 teal
    28777 
    28778 > color #14.4/a:2582 royal blue
    28779 
    28780 > color #14.4/a:2583 medium purple
    28781 
    28782 > color #14.4 white target c
    28783 
    28784 > name to_cartoon #14.4/a:2549-2559
    28785 
    28786 > name to_show #14.4/a:1955,2549-2559,2581-2584/Y:73-76
    28787 
    28788 > cartoon to_cartoon
    28789 
    28790 > show to_show
    28791 
    28792 > hide #14.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28793 
    28794 > hbonds to_show restrict to_show color yellow
    28795 
    28796 17 hydrogen bonds found 
    28797 
    28798 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J57_c4.png height 200 width
    28799 > 200 supersample 3
    28800 
    28801 > hide #!14.4 models
    28802 
    28803 > show #!14.5 models
    28804 
    28805 > hide #14.5
    28806 
    28807 > ~cartoon #14.5
    28808 
    28809 > color #14.5 white
    28810 
    28811 > color #14.5/a:2552 pale violet red
    28812 
    28813 > color #14.5/a:2553 khaki
    28814 
    28815 > color #14.5/a:2554 green yellow
    28816 
    28817 > color #14.5/a:2555 aquamarine
    28818 
    28819 > color #14.5/a:2556 steel blue
    28820 
    28821 > color #14.5/Y orchid
    28822 
    28823 > color #14.5/a:1955 pale green
    28824 
    28825 > color #14.5/a:2581 teal
    28826 
    28827 > color #14.5/a:2582 royal blue
    28828 
    28829 > color #14.5/a:2583 medium purple
    28830 
    28831 > color #14.5 white target c
    28832 
    28833 > name to_cartoon #14.5/a:2549-2559
    28834 
    28835 > name to_show #14.5/a:1955,2549-2559,2581-2584/Y:73-76
    28836 
    28837 > cartoon to_cartoon
    28838 
    28839 > show to_show
    28840 
    28841 > hide #14.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28842 
    28843 > hbonds to_show restrict to_show color yellow
    28844 
    28845 16 hydrogen bonds found 
    28846 
    28847 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J58_c5.png height 200 width
    28848 > 200 supersample 3
    28849 
    28850 > hide #!14.5 models
    28851 
    28852 > show #!14.6 models
    28853 
    28854 > hide #14.6
    28855 
    28856 > ~cartoon #14.6
    28857 
    28858 > color #14.6 white
    28859 
    28860 > color #14.6/a:2552 pale violet red
    28861 
    28862 > color #14.6/a:2553 khaki
    28863 
    28864 > color #14.6/a:2554 green yellow
    28865 
    28866 > color #14.6/a:2555 aquamarine
    28867 
    28868 > color #14.6/a:2556 steel blue
    28869 
    28870 > color #14.6/Y orchid
    28871 
    28872 > color #14.6/a:1955 pale green
    28873 
    28874 > color #14.6/a:2581 teal
    28875 
    28876 > color #14.6/a:2582 royal blue
    28877 
    28878 > color #14.6/a:2583 medium purple
    28879 
    28880 > color #14.6 white target c
    28881 
    28882 > name to_cartoon #14.6/a:2549-2559
    28883 
    28884 > name to_show #14.6/a:1955,2549-2559,2581-2584/Y:73-76
    28885 
    28886 > cartoon to_cartoon
    28887 
    28888 > show to_show
    28889 
    28890 > hide #14.6/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28891 
    28892 > hbonds to_show restrict to_show color yellow
    28893 
    28894 20 hydrogen bonds found 
    28895 
    28896 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J59_c6.png height 200 width
    28897 > 200 supersample 3
    28898 
    28899 > hide #!14.6 models
    28900 
    28901 > show #!14.7 models
    28902 
    28903 > hide #14.7
    28904 
    28905 > ~cartoon #14.7
    28906 
    28907 > color #14.7 white
    28908 
    28909 > color #14.7/a:2552 pale violet red
    28910 
    28911 > color #14.7/a:2553 khaki
    28912 
    28913 > color #14.7/a:2554 green yellow
    28914 
    28915 > color #14.7/a:2555 aquamarine
    28916 
    28917 > color #14.7/a:2556 steel blue
    28918 
    28919 > color #14.7/Y orchid
    28920 
    28921 > color #14.7/a:1955 pale green
    28922 
    28923 > color #14.7/a:2581 teal
    28924 
    28925 > color #14.7/a:2582 royal blue
    28926 
    28927 > color #14.7/a:2583 medium purple
    28928 
    28929 > color #14.7 white target c
    28930 
    28931 > name to_cartoon #14.7/a:2549-2559
    28932 
    28933 > name to_show #14.7/a:1955,2549-2559,2581-2584/Y:73-76
    28934 
    28935 > cartoon to_cartoon
    28936 
    28937 > show to_show
    28938 
    28939 > hide #14.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28940 
    28941 > hbonds to_show restrict to_show color yellow
    28942 
    28943 22 hydrogen bonds found 
    28944 
    28945 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J60_c7.png height 200 width
    28946 > 200 supersample 3
    28947 
    28948 > hide #!14.7 models
    28949 
    28950 > show #!14.8 models
    28951 
    28952 > hide #14.8
    28953 
    28954 > ~cartoon #14.8
    28955 
    28956 > color #14.8 white
    28957 
    28958 > color #14.8/a:2552 pale violet red
    28959 
    28960 > color #14.8/a:2553 khaki
    28961 
    28962 > color #14.8/a:2554 green yellow
    28963 
    28964 > color #14.8/a:2555 aquamarine
    28965 
    28966 > color #14.8/a:2556 steel blue
    28967 
    28968 > color #14.8/Y orchid
    28969 
    28970 > color #14.8/a:1955 pale green
    28971 
    28972 > color #14.8/a:2581 teal
    28973 
    28974 > color #14.8/a:2582 royal blue
    28975 
    28976 > color #14.8/a:2583 medium purple
    28977 
    28978 > color #14.8 white target c
    28979 
    28980 > name to_cartoon #14.8/a:2549-2559
    28981 
    28982 > name to_show #14.8/a:1955,2549-2559,2581-2584/Y:73-76
    28983 
    28984 > cartoon to_cartoon
    28985 
    28986 > show to_show
    28987 
    28988 > hide #14.8/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    28989 
    28990 > hbonds to_show restrict to_show color yellow
    28991 
    28992 21 hydrogen bonds found 
    28993 
    28994 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J61_c8.png height 200 width
    28995 > 200 supersample 3
    28996 
    28997 > hide #!14.8 models
    28998 
    28999 > show #!14.9 models
    29000 
    29001 > hide #14.9
    29002 
    29003 > ~cartoon #14.9
    29004 
    29005 > color #14.9 white
    29006 
    29007 > color #14.9/a:2552 pale violet red
    29008 
    29009 > color #14.9/a:2553 khaki
    29010 
    29011 > color #14.9/a:2554 green yellow
    29012 
    29013 > color #14.9/a:2555 aquamarine
    29014 
    29015 > color #14.9/a:2556 steel blue
    29016 
    29017 > color #14.9/Y orchid
    29018 
    29019 > color #14.9/a:1955 pale green
    29020 
    29021 > color #14.9/a:2581 teal
    29022 
    29023 > color #14.9/a:2582 royal blue
    29024 
    29025 > color #14.9/a:2583 medium purple
    29026 
    29027 > color #14.9 white target c
    29028 
    29029 > name to_cartoon #14.9/a:2549-2559
    29030 
    29031 > name to_show #14.9/a:1955,2549-2559,2581-2584/Y:73-76
    29032 
    29033 > cartoon to_cartoon
    29034 
    29035 > show to_show
    29036 
    29037 > hide #14.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29038 
    29039 > hbonds to_show restrict to_show color yellow
    29040 
    29041 27 hydrogen bonds found 
    29042 
    29043 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J62_c9.png height 200 width
    29044 > 200 supersample 3
    29045 
    29046 > hide #!14.9 models
    29047 
    29048 > show #!22.1 models
    29049 
    29050 > hide #22.1
    29051 
    29052 > ~cartoon #22.1
    29053 
    29054 > color #22.1 white
    29055 
    29056 > color #22.1/a:2552 pale violet red
    29057 
    29058 > color #22.1/a:2553 khaki
    29059 
    29060 > color #22.1/a:2554 green yellow
    29061 
    29062 > color #22.1/a:2555 aquamarine
    29063 
    29064 > color #22.1/a:2556 steel blue
    29065 
    29066 > color #22.1/Y orchid
    29067 
    29068 > color #22.1/a:1955 pale green
    29069 
    29070 > color #22.1/a:2581 teal
    29071 
    29072 > color #22.1/a:2582 royal blue
    29073 
    29074 > color #22.1/a:2583 medium purple
    29075 
    29076 > color #22.1 white target c
    29077 
    29078 > name to_cartoon #22.1/a:2549-2559
    29079 
    29080 > name to_show #22.1/a:1955,2549-2559,2581-2584/Y:73-76
    29081 
    29082 > cartoon to_cartoon
    29083 
    29084 > show to_show
    29085 
    29086 > hide #22.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29087 
    29088 > hbonds to_show restrict to_show color yellow
    29089 
    29090 24 hydrogen bonds found 
    29091 
    29092 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J111_ape.png height 200 width
    29093 > 200 supersample 3
    29094 
    29095 > hide #!22.1 models
    29096 
    29097 > show #!22.2 models
    29098 
    29099 > hide #22.2
    29100 
    29101 > ~cartoon #22.2
    29102 
    29103 > color #22.2 white
    29104 
    29105 > color #22.2/a:2552 pale violet red
    29106 
    29107 > color #22.2/a:2553 khaki
    29108 
    29109 > color #22.2/a:2554 green yellow
    29110 
    29111 > color #22.2/a:2555 aquamarine
    29112 
    29113 > color #22.2/a:2556 steel blue
    29114 
    29115 > color #22.2/Y orchid
    29116 
    29117 > color #22.2/a:1955 pale green
    29118 
    29119 > color #22.2/a:2581 teal
    29120 
    29121 > color #22.2/a:2582 royal blue
    29122 
    29123 > color #22.2/a:2583 medium purple
    29124 
    29125 > color #22.2 white target c
    29126 
    29127 > name to_cartoon #22.2/a:2549-2559
    29128 
    29129 > name to_show #22.2/a:1955,2549-2559,2581-2584/Y:73-76
    29130 
    29131 > cartoon to_cartoon
    29132 
    29133 > show to_show
    29134 
    29135 > hide #22.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29136 
    29137 > hbonds to_show restrict to_show color yellow
    29138 
    29139 25 hydrogen bonds found 
    29140 
    29141 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J112_ap.png height 200 width
    29142 > 200 supersample 3
    29143 
    29144 > hide #!22.2 models
    29145 
    29146 > show #!22.3 models
    29147 
    29148 > hide #22.3
    29149 
    29150 > ~cartoon #22.3
    29151 
    29152 > color #22.3 white
    29153 
    29154 > color #22.3/a:2552 pale violet red
    29155 
    29156 > color #22.3/a:2553 khaki
    29157 
    29158 > color #22.3/a:2554 green yellow
    29159 
    29160 > color #22.3/a:2555 aquamarine
    29161 
    29162 > color #22.3/a:2556 steel blue
    29163 
    29164 > color #22.3/Y orchid
    29165 
    29166 > color #22.3/a:1955 pale green
    29167 
    29168 > color #22.3/a:2581 teal
    29169 
    29170 > color #22.3/a:2582 royal blue
    29171 
    29172 > color #22.3/a:2583 medium purple
    29173 
    29174 > color #22.3 white target c
    29175 
    29176 > name to_cartoon #22.3/a:2549-2559
    29177 
    29178 > name to_show #22.3/a:1955,2549-2559,2581-2584/Y:73-76
    29179 
    29180 > cartoon to_cartoon
    29181 
    29182 > show to_show
    29183 
    29184 > hide #22.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29185 
    29186 > hbonds to_show restrict to_show color yellow
    29187 
    29188 16 hydrogen bonds found 
    29189 
    29190 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J113_pe.png height 200 width
    29191 > 200 supersample 3
    29192 
    29193 > hide #!22.3 models
    29194 
    29195 > show #!22.4 models
    29196 
    29197 > hide #22.4
    29198 
    29199 > ~cartoon #22.4
    29200 
    29201 > color #22.4 white
    29202 
    29203 > color #22.4/a:2552 pale violet red
    29204 
    29205 > color #22.4/a:2553 khaki
    29206 
    29207 > color #22.4/a:2554 green yellow
    29208 
    29209 > color #22.4/a:2555 aquamarine
    29210 
    29211 > color #22.4/a:2556 steel blue
    29212 
    29213 > color #22.4/Y orchid
    29214 
    29215 > color #22.4/a:1955 pale green
    29216 
    29217 > color #22.4/a:2581 teal
    29218 
    29219 > color #22.4/a:2582 royal blue
    29220 
    29221 > color #22.4/a:2583 medium purple
    29222 
    29223 > color #22.4 white target c
    29224 
    29225 > name to_cartoon #22.4/a:2549-2559
    29226 
    29227 > name to_show #22.4/a:1955,2549-2559,2581-2584/Y:73-76
    29228 
    29229 > cartoon to_cartoon
    29230 
    29231 > show to_show
    29232 
    29233 > hide #22.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29234 
    29235 > hbonds to_show restrict to_show color yellow
    29236 
    29237 18 hydrogen bonds found 
    29238 
    29239 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J124_e.png height 200 width
    29240 > 200 supersample 3
    29241 
    29242 > hide #!22.4 models
    29243 
    29244 > graphics silhouettes true
    29245 
    29246 > graphics silhouettes true width 0.5
    29247 
    29248 > show #!1.7 models
    29249 
    29250 > hide #1.7
    29251 
    29252 > ~cartoon #1.7
    29253 
    29254 > color #1.7 white
    29255 
    29256 > color #1.7/a:2552 pale violet red
    29257 
    29258 > color #1.7/a:2553 khaki
    29259 
    29260 > color #1.7/a:2554 green yellow
    29261 
    29262 > color #1.7/a:2555 aquamarine
    29263 
    29264 > color #1.7/a:2556 steel blue
    29265 
    29266 > color #1.7/Y orchid
    29267 
    29268 > color #1.7/a:1955 pale green
    29269 
    29270 > color #1.7/a:2581 teal
    29271 
    29272 > color #1.7/a:2582 royal blue
    29273 
    29274 > color #1.7/a:2583 medium purple
    29275 
    29276 > color #1.7 white target c
    29277 
    29278 > name to_cartoon #1.7/a:2549-2559
    29279 
    29280 > name to_show #1.7/a:1955,2549-2559,2581-2584/Y:73-76
    29281 
    29282 > cartoon to_cartoon
    29283 
    29284 > show to_show
    29285 
    29286 > hide #1.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29287 
    29288 > hbonds to_show restrict to_show color yellow
    29289 
    29290 16 hydrogen bonds found 
    29291 
    29292 > save /Users/dalar193/Desktop/A_loop/A_loop_8cgk.png height 200 width 200
    29293 > supersample 3
    29294 
    29295 > hide #!1.7 models
    29296 
    29297 > graphics silhouettes true width 1 color gray
    29298 
    29299 > show #!1.7 models
    29300 
    29301 > hide #1.7
    29302 
    29303 > ~cartoon #1.7
    29304 
    29305 > color #1.7 white
    29306 
    29307 > color #1.7/a:2552 pale violet red
    29308 
    29309 > color #1.7/a:2553 khaki
    29310 
    29311 > color #1.7/a:2554 green yellow
    29312 
    29313 > color #1.7/a:2555 aquamarine
    29314 
    29315 > color #1.7/a:2556 steel blue
    29316 
    29317 > color #1.7/Y orchid
    29318 
    29319 > color #1.7/a:1955 pale green
    29320 
    29321 > color #1.7/a:2581 teal
    29322 
    29323 > color #1.7/a:2582 royal blue
    29324 
    29325 > color #1.7/a:2583 medium purple
    29326 
    29327 > color #1.7 white target c
    29328 
    29329 > name to_cartoon #1.7/a:2549-2559
    29330 
    29331 > name to_show #1.7/a:1955,2549-2559,2581-2584/Y:73-76
    29332 
    29333 > cartoon to_cartoon
    29334 
    29335 > show to_show
    29336 
    29337 > hide #1.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29338 
    29339 > hbonds to_show restrict to_show color yellow
    29340 
    29341 16 hydrogen bonds found 
    29342 
    29343 > save /Users/dalar193/Desktop/A_loop/A_loop_8cgk.png height 200 width 200
    29344 > supersample 3
    29345 
    29346 > hide #!1.7 models
    29347 
    29348 > show #!1.2 models
    29349 
    29350 > hide #1.2
    29351 
    29352 > ~cartoon #1.2
    29353 
    29354 > color #1.2 white
    29355 
    29356 > color #1.2/a:2552 pale violet red
    29357 
    29358 > color #1.2/a:2553 khaki
    29359 
    29360 > color #1.2/a:2554 green yellow
    29361 
    29362 > color #1.2/a:2555 aquamarine
    29363 
    29364 > color #1.2/a:2556 steel blue
    29365 
    29366 > color #1.2/Y orchid
    29367 
    29368 > color #1.2/a:1955 pale green
    29369 
    29370 > color #1.2/a:2581 teal
    29371 
    29372 > color #1.2/a:2582 royal blue
    29373 
    29374 > color #1.2/a:2583 medium purple
    29375 
    29376 > color #1.2 white target c
    29377 
    29378 > name to_cartoon #1.2/a:2549-2559
    29379 
    29380 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    29381 
    29382 > cartoon to_cartoon
    29383 
    29384 > show to_show
    29385 
    29386 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29387 
    29388 > hbonds to_show restrict to_show color yellow
    29389 
    29390 24 hydrogen bonds found 
    29391 
    29392 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 200 width 200
    29393 > supersample 3
    29394 
    29395 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    29396 
    29397 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 200 width 200
    29398 > supersample 3
    29399 
    29400 > hide #!1.2 models
    29401 
    29402 > show #!1.7 models
    29403 
    29404 > hide #1.7
    29405 
    29406 > ~cartoon #1.7
    29407 
    29408 > color #1.7 white
    29409 
    29410 > color #1.7/a:2552 pale violet red
    29411 
    29412 > color #1.7/a:2553 khaki
    29413 
    29414 > color #1.7/a:2554 green yellow
    29415 
    29416 > color #1.7/a:2555 aquamarine
    29417 
    29418 > color #1.7/a:2556 steel blue
    29419 
    29420 > color #1.7/Y orchid
    29421 
    29422 > color #1.7/a:1955 pale green
    29423 
    29424 > color #1.7/a:2581 teal
    29425 
    29426 > color #1.7/a:2582 royal blue
    29427 
    29428 > color #1.7/a:2583 medium purple
    29429 
    29430 > color #1.7 white target c
    29431 
    29432 > name to_cartoon #1.7/a:2549-2559
    29433 
    29434 > name to_show #1.7/a:1955,2549-2559,2581-2584/Y:73-76
    29435 
    29436 > cartoon to_cartoon
    29437 
    29438 > show to_show
    29439 
    29440 > hide #1.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29441 
    29442 > hbonds to_show restrict to_show color yellow
    29443 
    29444 16 hydrogen bonds found 
    29445 
    29446 > save /Users/dalar193/Desktop/A_loop/A_loop_8cgk.png height 200 width 200
    29447 > supersample 3
    29448 
    29449 > hide #!1.7 models
    29450 
    29451 > show #!1.9 models
    29452 
    29453 > hide #1.9
    29454 
    29455 > ~cartoon #1.9
    29456 
    29457 > color #1.9 white
    29458 
    29459 > color #1.9/A:2552 pale violet red
    29460 
    29461 > color #1.9/A:2553 khaki
    29462 
    29463 > color #1.9/A:2554 green yellow
    29464 
    29465 > color #1.9/A:2555 aquamarine
    29466 
    29467 > color #1.9/A:2556 steel blue
    29468 
    29469 > color #1.9/Y orchid
    29470 
    29471 > color #1.9/A:1955 pale green
    29472 
    29473 > color #1.9/A:2581 teal
    29474 
    29475 > color #1.9/A:2582 royal blue
    29476 
    29477 > color #1.9/A:2583 medium purple
    29478 
    29479 > color #1.9 white target c
    29480 
    29481 > name to_cartoon #1.9/A:2549-2559
    29482 
    29483 > name to_show #1.9/A:1955,2549-2559,2581-2584/Y:73-76
    29484 
    29485 > cartoon to_cartoon
    29486 
    29487 > show to_show
    29488 
    29489 > hide #1.9/A:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29490 
    29491 > hbonds to_show restrict to_show color yellow
    29492 
    29493 25 hydrogen bonds found 
    29494 
    29495 > save /Users/dalar193/Desktop/A_loop/A_loop_7bv8.png height 200 width 200
    29496 > supersample 3
    29497 
    29498 > hide #!1.9 models
    29499 
    29500 > show #!1.11 models
    29501 
    29502 > hide #1.11
    29503 
    29504 > ~cartoon #1.11
    29505 
    29506 > color #1.11 white
    29507 
    29508 > color #1.11/BA:2552 pale violet red
    29509 
    29510 > color #1.11/BA:2553 khaki
    29511 
    29512 > color #1.11/BA:2554 green yellow
    29513 
    29514 > color #1.11/BA:2555 aquamarine
    29515 
    29516 > color #1.11/BA:2556 steel blue
    29517 
    29518 > color #1.11/Y orchid
    29519 
    29520 > color #1.11/BA:1955 pale green
    29521 
    29522 > color #1.11/BA:2581 teal
    29523 
    29524 > color #1.11/BA:2582 royal blue
    29525 
    29526 > color #1.11/BA:2583 medium purple
    29527 
    29528 > color #1.11 white target c
    29529 
    29530 > name to_cartoon #1.11/BA:2549-2559
    29531 
    29532 > name to_show #1.11/BA:1955,2549-2559,2581-2584/Y:73-76
    29533 
    29534 > cartoon to_cartoon
    29535 
    29536 > show to_show
    29537 
    29538 > hide #1.11/BA:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29539 
    29540 > hbonds to_show restrict to_show color yellow
    29541 
    29542 17 hydrogen bonds found 
    29543 
    29544 > save /Users/dalar193/Desktop/A_loop/A_loop_7o1a.png height 200 width 200
    29545 > supersample 3
    29546 
    29547 > hide #!1.11 models
    29548 
    29549 > show #!6.10 models
    29550 
    29551 > hide #6.10
    29552 
    29553 > ~cartoon #6.10
    29554 
    29555 > color #6.10 white
    29556 
    29557 > color #6.10/a:2552 pale violet red
    29558 
    29559 > color #6.10/a:2553 khaki
    29560 
    29561 > color #6.10/a:2554 green yellow
    29562 
    29563 > color #6.10/a:2555 aquamarine
    29564 
    29565 > color #6.10/a:2556 steel blue
    29566 
    29567 > color #6.10/Y orchid
    29568 
    29569 > color #6.10/a:1955 pale green
    29570 
    29571 > color #6.10/a:2581 teal
    29572 
    29573 > color #6.10/a:2582 royal blue
    29574 
    29575 > color #6.10/a:2583 medium purple
    29576 
    29577 > color #6.10 white target c
    29578 
    29579 > name to_cartoon #6.10/a:2549-2559
    29580 
    29581 > name to_show #6.10/a:1955,2549-2559,2581-2584/Y:73-76
    29582 
    29583 > cartoon to_cartoon
    29584 
    29585 > show to_show
    29586 
    29587 > hide #6.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29588 
    29589 > hbonds to_show restrict to_show color yellow
    29590 
    29591 16 hydrogen bonds found 
    29592 
    29593 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J83_cl0.png height 200 width
    29594 > 200 supersample 3
    29595 
    29596 > hide #!6.10 models
    29597 
    29598 > show #!6.1 models
    29599 
    29600 > hide #6.1
    29601 
    29602 > ~cartoon #6.1
    29603 
    29604 > color #6.1 white
    29605 
    29606 > color #6.1/a:2552 pale violet red
    29607 
    29608 > color #6.1/a:2553 khaki
    29609 
    29610 > color #6.1/a:2554 green yellow
    29611 
    29612 > color #6.1/a:2555 aquamarine
    29613 
    29614 > color #6.1/a:2556 steel blue
    29615 
    29616 > color #6.1/Y orchid
    29617 
    29618 > color #6.1/a:1955 pale green
    29619 
    29620 > color #6.1/a:2581 teal
    29621 
    29622 > color #6.1/a:2582 royal blue
    29623 
    29624 > color #6.1/a:2583 medium purple
    29625 
    29626 > color #6.1 white target c
    29627 
    29628 > name to_cartoon #6.1/a:2549-2559
    29629 
    29630 > name to_show #6.1/a:1955,2549-2559,2581-2584/Y:73-76
    29631 
    29632 > cartoon to_cartoon
    29633 
    29634 > show to_show
    29635 
    29636 > hide #6.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29637 
    29638 > hbonds to_show restrict to_show color yellow
    29639 
    29640 19 hydrogen bonds found 
    29641 
    29642 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J84_cl1.png height 200 width
    29643 > 200 supersample 3
    29644 
    29645 > hide #!6.1 models
    29646 
    29647 > show #!6.2 models
    29648 
    29649 > hide #6.2
    29650 
    29651 > ~cartoon #6.2
    29652 
    29653 > color #6.2 white
    29654 
    29655 > color #6.2/a:2552 pale violet red
    29656 
    29657 > color #6.2/a:2553 khaki
    29658 
    29659 > color #6.2/a:2554 green yellow
    29660 
    29661 > color #6.2/a:2555 aquamarine
    29662 
    29663 > color #6.2/a:2556 steel blue
    29664 
    29665 > color #6.2/Y orchid
    29666 
    29667 > color #6.2/a:1955 pale green
    29668 
    29669 > color #6.2/a:2581 teal
    29670 
    29671 > color #6.2/a:2582 royal blue
    29672 
    29673 > color #6.2/a:2583 medium purple
    29674 
    29675 > color #6.2 white target c
    29676 
    29677 > name to_cartoon #6.2/a:2549-2559
    29678 
    29679 > name to_show #6.2/a:1955,2549-2559,2581-2584/Y:73-76
    29680 
    29681 > cartoon to_cartoon
    29682 
    29683 > show to_show
    29684 
    29685 > hide #6.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29686 
    29687 > hbonds to_show restrict to_show color yellow
    29688 
    29689 23 hydrogen bonds found 
    29690 
    29691 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J85_cl2.png height 200 width
    29692 > 200 supersample 3
    29693 
    29694 > hide #!6.2 models
    29695 
    29696 > show #!6.3 models
    29697 
    29698 > hide #6.3
    29699 
    29700 > ~cartoon #6.3
    29701 
    29702 > color #6.3 white
    29703 
    29704 > color #6.3/a:2552 pale violet red
    29705 
    29706 > color #6.3/a:2553 khaki
    29707 
    29708 > color #6.3/a:2554 green yellow
    29709 
    29710 > color #6.3/a:2555 aquamarine
    29711 
    29712 > color #6.3/a:2556 steel blue
    29713 
    29714 > color #6.3/Y orchid
    29715 
    29716 > color #6.3/a:1955 pale green
    29717 
    29718 > color #6.3/a:2581 teal
    29719 
    29720 > color #6.3/a:2582 royal blue
    29721 
    29722 > color #6.3/a:2583 medium purple
    29723 
    29724 > color #6.3 white target c
    29725 
    29726 > name to_cartoon #6.3/a:2549-2559
    29727 
    29728 > name to_show #6.3/a:1955,2549-2559,2581-2584/Y:73-76
    29729 
    29730 > cartoon to_cartoon
    29731 
    29732 > show to_show
    29733 
    29734 > hide #6.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29735 
    29736 > hbonds to_show restrict to_show color yellow
    29737 
    29738 16 hydrogen bonds found 
    29739 
    29740 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J86_cl3.png height 200 width
    29741 > 200 supersample 3
    29742 
    29743 > hide #!6.3 models
    29744 
    29745 > show #!6.4 models
    29746 
    29747 > hide #6.4
    29748 
    29749 > ~cartoon #6.4
    29750 
    29751 > color #6.4 white
    29752 
    29753 > color #6.4/a:2552 pale violet red
    29754 
    29755 > color #6.4/a:2553 khaki
    29756 
    29757 > color #6.4/a:2554 green yellow
    29758 
    29759 > color #6.4/a:2555 aquamarine
    29760 
    29761 > color #6.4/a:2556 steel blue
    29762 
    29763 > color #6.4/Y orchid
    29764 
    29765 > color #6.4/a:1955 pale green
    29766 
    29767 > color #6.4/a:2581 teal
    29768 
    29769 > color #6.4/a:2582 royal blue
    29770 
    29771 > color #6.4/a:2583 medium purple
    29772 
    29773 > color #6.4 white target c
    29774 
    29775 > name to_cartoon #6.4/a:2549-2559
    29776 
    29777 > name to_show #6.4/a:1955,2549-2559,2581-2584/Y:73-76
    29778 
    29779 > cartoon to_cartoon
    29780 
    29781 > show to_show
    29782 
    29783 > hide #6.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29784 
    29785 > hbonds to_show restrict to_show color yellow
    29786 
    29787 22 hydrogen bonds found 
    29788 
    29789 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J87_cl4.png height 200 width
    29790 > 200 supersample 3
    29791 
    29792 > hide #!6.4 models
    29793 
    29794 > show #!6.5 models
    29795 
    29796 > hide #6.5
    29797 
    29798 > ~cartoon #6.5
    29799 
    29800 > color #6.5 white
    29801 
    29802 > color #6.5/a:2552 pale violet red
    29803 
    29804 > color #6.5/a:2553 khaki
    29805 
    29806 > color #6.5/a:2554 green yellow
    29807 
    29808 > color #6.5/a:2555 aquamarine
    29809 
    29810 > color #6.5/a:2556 steel blue
    29811 
    29812 > color #6.5/Y orchid
    29813 
    29814 > color #6.5/a:1955 pale green
    29815 
    29816 > color #6.5/a:2581 teal
    29817 
    29818 > color #6.5/a:2582 royal blue
    29819 
    29820 > color #6.5/a:2583 medium purple
    29821 
    29822 > color #6.5 white target c
    29823 
    29824 > name to_cartoon #6.5/a:2549-2559
    29825 
    29826 > name to_show #6.5/a:1955,2549-2559,2581-2584/Y:73-76
    29827 
    29828 > cartoon to_cartoon
    29829 
    29830 > show to_show
    29831 
    29832 > hide #6.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29833 
    29834 > hbonds to_show restrict to_show color yellow
    29835 
    29836 16 hydrogen bonds found 
    29837 
    29838 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J88_cl5.png height 200 width
    29839 > 200 supersample 3
    29840 
    29841 > hide #!6.5 models
    29842 
    29843 > show #!6.6 models
    29844 
    29845 > hide #6.6
    29846 
    29847 > ~cartoon #6.6
    29848 
    29849 > color #6.6 white
    29850 
    29851 > color #6.6/a:2552 pale violet red
    29852 
    29853 > color #6.6/a:2553 khaki
    29854 
    29855 > color #6.6/a:2554 green yellow
    29856 
    29857 > color #6.6/a:2555 aquamarine
    29858 
    29859 > color #6.6/a:2556 steel blue
    29860 
    29861 > color #6.6/Y orchid
    29862 
    29863 > color #6.6/a:1955 pale green
    29864 
    29865 > color #6.6/a:2581 teal
    29866 
    29867 > color #6.6/a:2582 royal blue
    29868 
    29869 > color #6.6/a:2583 medium purple
    29870 
    29871 > color #6.6 white target c
    29872 
    29873 > name to_cartoon #6.6/a:2549-2559
    29874 
    29875 > name to_show #6.6/a:1955,2549-2559,2581-2584/Y:73-76
    29876 
    29877 > cartoon to_cartoon
    29878 
    29879 > show to_show
    29880 
    29881 > hide #6.6/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29882 
    29883 > hbonds to_show restrict to_show color yellow
    29884 
    29885 22 hydrogen bonds found 
    29886 
    29887 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J89_cl6.png height 200 width
    29888 > 200 supersample 3
    29889 
    29890 > hide #!6.6 models
    29891 
    29892 > show #!6.7 models
    29893 
    29894 > hide #6.7
    29895 
    29896 > ~cartoon #6.7
    29897 
    29898 > color #6.7 white
    29899 
    29900 > color #6.7/a:2552 pale violet red
    29901 
    29902 > color #6.7/a:2553 khaki
    29903 
    29904 > color #6.7/a:2554 green yellow
    29905 
    29906 > color #6.7/a:2555 aquamarine
    29907 
    29908 > color #6.7/a:2556 steel blue
    29909 
    29910 > color #6.7/Y orchid
    29911 
    29912 > color #6.7/a:1955 pale green
    29913 
    29914 > color #6.7/a:2581 teal
    29915 
    29916 > color #6.7/a:2582 royal blue
    29917 
    29918 > color #6.7/a:2583 medium purple
    29919 
    29920 > color #6.7 white target c
    29921 
    29922 > name to_cartoon #6.7/a:2549-2559
    29923 
    29924 > name to_show #6.7/a:1955,2549-2559,2581-2584/Y:73-76
    29925 
    29926 > cartoon to_cartoon
    29927 
    29928 > show to_show
    29929 
    29930 > hide #6.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29931 
    29932 > hbonds to_show restrict to_show color yellow
    29933 
    29934 20 hydrogen bonds found 
    29935 
    29936 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J90_cl7.png height 200 width
    29937 > 200 supersample 3
    29938 
    29939 > hide #!6.7 models
    29940 
    29941 > show #!6.8 models
    29942 
    29943 > hide #6.8
    29944 
    29945 > ~cartoon #6.8
    29946 
    29947 > color #6.8 white
    29948 
    29949 > color #6.8/a:2552 pale violet red
    29950 
    29951 > color #6.8/a:2553 khaki
    29952 
    29953 > color #6.8/a:2554 green yellow
    29954 
    29955 > color #6.8/a:2555 aquamarine
    29956 
    29957 > color #6.8/a:2556 steel blue
    29958 
    29959 > color #6.8/Y orchid
    29960 
    29961 > color #6.8/a:1955 pale green
    29962 
    29963 > color #6.8/a:2581 teal
    29964 
    29965 > color #6.8/a:2582 royal blue
    29966 
    29967 > color #6.8/a:2583 medium purple
    29968 
    29969 > color #6.8 white target c
    29970 
    29971 > name to_cartoon #6.8/a:2549-2559
    29972 
    29973 > name to_show #6.8/a:1955,2549-2559,2581-2584/Y:73-76
    29974 
    29975 > cartoon to_cartoon
    29976 
    29977 > show to_show
    29978 
    29979 > hide #6.8/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    29980 
    29981 > hbonds to_show restrict to_show color yellow
    29982 
    29983 15 hydrogen bonds found 
    29984 
    29985 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J91_cl8.png height 200 width
    29986 > 200 supersample 3
    29987 
    29988 > hide #!6.8 models
    29989 
    29990 > show #!6.9 models
    29991 
    29992 > hide #6.9
    29993 
    29994 > ~cartoon #6.9
    29995 
    29996 > color #6.9 white
    29997 
    29998 > color #6.9/a:2552 pale violet red
    29999 
    30000 > color #6.9/a:2553 khaki
    30001 
    30002 > color #6.9/a:2554 green yellow
    30003 
    30004 > color #6.9/a:2555 aquamarine
    30005 
    30006 > color #6.9/a:2556 steel blue
    30007 
    30008 > color #6.9/Y orchid
    30009 
    30010 > color #6.9/a:1955 pale green
    30011 
    30012 > color #6.9/a:2581 teal
    30013 
    30014 > color #6.9/a:2582 royal blue
    30015 
    30016 > color #6.9/a:2583 medium purple
    30017 
    30018 > color #6.9 white target c
    30019 
    30020 > name to_cartoon #6.9/a:2549-2559
    30021 
    30022 > name to_show #6.9/a:1955,2549-2559,2581-2584/Y:73-76
    30023 
    30024 > cartoon to_cartoon
    30025 
    30026 > show to_show
    30027 
    30028 > hide #6.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30029 
    30030 > hbonds to_show restrict to_show color yellow
    30031 
    30032 18 hydrogen bonds found 
    30033 
    30034 > save /Users/dalar193/Desktop/A_loop/A_loop_d9_J92_cl9.png height 200 width
    30035 > 200 supersample 3
    30036 
    30037 > hide #!6.9 models
    30038 
    30039 > show #!14.10 models
    30040 
    30041 > hide #14.10
    30042 
    30043 > ~cartoon #14.10
    30044 
    30045 > color #14.10 white
    30046 
    30047 > color #14.10/a:2552 pale violet red
    30048 
    30049 > color #14.10/a:2553 khaki
    30050 
    30051 > color #14.10/a:2554 green yellow
    30052 
    30053 > color #14.10/a:2555 aquamarine
    30054 
    30055 > color #14.10/a:2556 steel blue
    30056 
    30057 > color #14.10/Y orchid
    30058 
    30059 > color #14.10/a:1955 pale green
    30060 
    30061 > color #14.10/a:2581 teal
    30062 
    30063 > color #14.10/a:2582 royal blue
    30064 
    30065 > color #14.10/a:2583 medium purple
    30066 
    30067 > color #14.10 white target c
    30068 
    30069 > name to_cartoon #14.10/a:2549-2559
    30070 
    30071 > name to_show #14.10/a:1955,2549-2559,2581-2584/Y:73-76
    30072 
    30073 > cartoon to_cartoon
    30074 
    30075 > show to_show
    30076 
    30077 > hide #14.10/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30078 
    30079 > hbonds to_show restrict to_show color yellow
    30080 
    30081 17 hydrogen bonds found 
    30082 
    30083 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J53_c0.png height 200 width
    30084 > 200 supersample 3
    30085 
    30086 > hide #!14.10 models
    30087 
    30088 > show #!14.1 models
    30089 
    30090 > hide #14.1
    30091 
    30092 > ~cartoon #14.1
    30093 
    30094 > color #14.1 white
    30095 
    30096 > color #14.1/a:2552 pale violet red
    30097 
    30098 > color #14.1/a:2553 khaki
    30099 
    30100 > color #14.1/a:2554 green yellow
    30101 
    30102 > color #14.1/a:2555 aquamarine
    30103 
    30104 > color #14.1/a:2556 steel blue
    30105 
    30106 > color #14.1/Y orchid
    30107 
    30108 > color #14.1/a:1955 pale green
    30109 
    30110 > color #14.1/a:2581 teal
    30111 
    30112 > color #14.1/a:2582 royal blue
    30113 
    30114 > color #14.1/a:2583 medium purple
    30115 
    30116 > color #14.1 white target c
    30117 
    30118 > name to_cartoon #14.1/a:2549-2559
    30119 
    30120 > name to_show #14.1/a:1955,2549-2559,2581-2584/Y:73-76
    30121 
    30122 > cartoon to_cartoon
    30123 
    30124 > show to_show
    30125 
    30126 > hide #14.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30127 
    30128 > hbonds to_show restrict to_show color yellow
    30129 
    30130 18 hydrogen bonds found 
    30131 
    30132 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J54_c1.png height 200 width
    30133 > 200 supersample 3
    30134 
    30135 > hide #!14.1 models
    30136 
    30137 > show #!14.2 models
    30138 
    30139 > hide #14.2
    30140 
    30141 > ~cartoon #14.2
    30142 
    30143 > color #14.2 white
    30144 
    30145 > color #14.2/a:2552 pale violet red
    30146 
    30147 > color #14.2/a:2553 khaki
    30148 
    30149 > color #14.2/a:2554 green yellow
    30150 
    30151 > color #14.2/a:2555 aquamarine
    30152 
    30153 > color #14.2/a:2556 steel blue
    30154 
    30155 > color #14.2/Y orchid
    30156 
    30157 > color #14.2/a:1955 pale green
    30158 
    30159 > color #14.2/a:2581 teal
    30160 
    30161 > color #14.2/a:2582 royal blue
    30162 
    30163 > color #14.2/a:2583 medium purple
    30164 
    30165 > color #14.2 white target c
    30166 
    30167 > name to_cartoon #14.2/a:2549-2559
    30168 
    30169 > name to_show #14.2/a:1955,2549-2559,2581-2584/Y:73-76
    30170 
    30171 > cartoon to_cartoon
    30172 
    30173 > show to_show
    30174 
    30175 > hide #14.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30176 
    30177 > hbonds to_show restrict to_show color yellow
    30178 
    30179 18 hydrogen bonds found 
    30180 
    30181 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J55_c2.png height 200 width
    30182 > 200 supersample 3
    30183 
    30184 > hide #!14.2 models
    30185 
    30186 > show #!14.3 models
    30187 
    30188 > hide #14.3
    30189 
    30190 > ~cartoon #14.3
    30191 
    30192 > color #14.3 white
    30193 
    30194 > color #14.3/a:2552 pale violet red
    30195 
    30196 > color #14.3/a:2553 khaki
    30197 
    30198 > color #14.3/a:2554 green yellow
    30199 
    30200 > color #14.3/a:2555 aquamarine
    30201 
    30202 > color #14.3/a:2556 steel blue
    30203 
    30204 > color #14.3/Y orchid
    30205 
    30206 > color #14.3/a:1955 pale green
    30207 
    30208 > color #14.3/a:2581 teal
    30209 
    30210 > color #14.3/a:2582 royal blue
    30211 
    30212 > color #14.3/a:2583 medium purple
    30213 
    30214 > color #14.3 white target c
    30215 
    30216 > name to_cartoon #14.3/a:2549-2559
    30217 
    30218 > name to_show #14.3/a:1955,2549-2559,2581-2584/Y:73-76
    30219 
    30220 > cartoon to_cartoon
    30221 
    30222 > show to_show
    30223 
    30224 > hide #14.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30225 
    30226 > hbonds to_show restrict to_show color yellow
    30227 
    30228 24 hydrogen bonds found 
    30229 
    30230 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J56_c3.png height 200 width
    30231 > 200 supersample 3
    30232 
    30233 > hide #!14.3 models
    30234 
    30235 > show #!14.4 models
    30236 
    30237 > hide #14.4
    30238 
    30239 > ~cartoon #14.4
    30240 
    30241 > color #14.4 white
    30242 
    30243 > color #14.4/a:2552 pale violet red
    30244 
    30245 > color #14.4/a:2553 khaki
    30246 
    30247 > color #14.4/a:2554 green yellow
    30248 
    30249 > color #14.4/a:2555 aquamarine
    30250 
    30251 > color #14.4/a:2556 steel blue
    30252 
    30253 > color #14.4/Y orchid
    30254 
    30255 > color #14.4/a:1955 pale green
    30256 
    30257 > color #14.4/a:2581 teal
    30258 
    30259 > color #14.4/a:2582 royal blue
    30260 
    30261 > color #14.4/a:2583 medium purple
    30262 
    30263 > color #14.4 white target c
    30264 
    30265 > name to_cartoon #14.4/a:2549-2559
    30266 
    30267 > name to_show #14.4/a:1955,2549-2559,2581-2584/Y:73-76
    30268 
    30269 > cartoon to_cartoon
    30270 
    30271 > show to_show
    30272 
    30273 > hide #14.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30274 
    30275 > hbonds to_show restrict to_show color yellow
    30276 
    30277 17 hydrogen bonds found 
    30278 
    30279 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J57_c4.png height 200 width
    30280 > 200 supersample 3
    30281 
    30282 > hide #!14.4 models
    30283 
    30284 > show #!14.5 models
    30285 
    30286 > hide #14.5
    30287 
    30288 > ~cartoon #14.5
    30289 
    30290 > color #14.5 white
    30291 
    30292 > color #14.5/a:2552 pale violet red
    30293 
    30294 > color #14.5/a:2553 khaki
    30295 
    30296 > color #14.5/a:2554 green yellow
    30297 
    30298 > color #14.5/a:2555 aquamarine
    30299 
    30300 > color #14.5/a:2556 steel blue
    30301 
    30302 > color #14.5/Y orchid
    30303 
    30304 > color #14.5/a:1955 pale green
    30305 
    30306 > color #14.5/a:2581 teal
    30307 
    30308 > color #14.5/a:2582 royal blue
    30309 
    30310 > color #14.5/a:2583 medium purple
    30311 
    30312 > color #14.5 white target c
    30313 
    30314 > name to_cartoon #14.5/a:2549-2559
    30315 
    30316 > name to_show #14.5/a:1955,2549-2559,2581-2584/Y:73-76
    30317 
    30318 > cartoon to_cartoon
    30319 
    30320 > show to_show
    30321 
    30322 > hide #14.5/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30323 
    30324 > hbonds to_show restrict to_show color yellow
    30325 
    30326 16 hydrogen bonds found 
    30327 
    30328 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J58_c5.png height 200 width
    30329 > 200 supersample 3
    30330 
    30331 > hide #!14.5 models
    30332 
    30333 > show #!14.6 models
    30334 
    30335 > hide #14.6
    30336 
    30337 > ~cartoon #14.6
    30338 
    30339 > color #14.6 white
    30340 
    30341 > color #14.6/a:2552 pale violet red
    30342 
    30343 > color #14.6/a:2553 khaki
    30344 
    30345 > color #14.6/a:2554 green yellow
    30346 
    30347 > color #14.6/a:2555 aquamarine
    30348 
    30349 > color #14.6/a:2556 steel blue
    30350 
    30351 > color #14.6/Y orchid
    30352 
    30353 > color #14.6/a:1955 pale green
    30354 
    30355 > color #14.6/a:2581 teal
    30356 
    30357 > color #14.6/a:2582 royal blue
    30358 
    30359 > color #14.6/a:2583 medium purple
    30360 
    30361 > color #14.6 white target c
    30362 
    30363 > name to_cartoon #14.6/a:2549-2559
    30364 
    30365 > name to_show #14.6/a:1955,2549-2559,2581-2584/Y:73-76
    30366 
    30367 > cartoon to_cartoon
    30368 
    30369 > show to_show
    30370 
    30371 > hide #14.6/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30372 
    30373 > hbonds to_show restrict to_show color yellow
    30374 
    30375 20 hydrogen bonds found 
    30376 
    30377 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J59_c6.png height 200 width
    30378 > 200 supersample 3
    30379 
    30380 > hide #!14.6 models
    30381 
    30382 > show #!14.7 models
    30383 
    30384 > hide #14.7
    30385 
    30386 > ~cartoon #14.7
    30387 
    30388 > color #14.7 white
    30389 
    30390 > color #14.7/a:2552 pale violet red
    30391 
    30392 > color #14.7/a:2553 khaki
    30393 
    30394 > color #14.7/a:2554 green yellow
    30395 
    30396 > color #14.7/a:2555 aquamarine
    30397 
    30398 > color #14.7/a:2556 steel blue
    30399 
    30400 > color #14.7/Y orchid
    30401 
    30402 > color #14.7/a:1955 pale green
    30403 
    30404 > color #14.7/a:2581 teal
    30405 
    30406 > color #14.7/a:2582 royal blue
    30407 
    30408 > color #14.7/a:2583 medium purple
    30409 
    30410 > color #14.7 white target c
    30411 
    30412 > name to_cartoon #14.7/a:2549-2559
    30413 
    30414 > name to_show #14.7/a:1955,2549-2559,2581-2584/Y:73-76
    30415 
    30416 > cartoon to_cartoon
    30417 
    30418 > show to_show
    30419 
    30420 > hide #14.7/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30421 
    30422 > hbonds to_show restrict to_show color yellow
    30423 
    30424 22 hydrogen bonds found 
    30425 
    30426 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J60_c7.png height 200 width
    30427 > 200 supersample 3
    30428 
    30429 > hide #!14.7 models
    30430 
    30431 > show #!14.8 models
    30432 
    30433 > hide #14.8
    30434 
    30435 > ~cartoon #14.8
    30436 
    30437 > color #14.8 white
    30438 
    30439 > color #14.8/a:2552 pale violet red
    30440 
    30441 > color #14.8/a:2553 khaki
    30442 
    30443 > color #14.8/a:2554 green yellow
    30444 
    30445 > color #14.8/a:2555 aquamarine
    30446 
    30447 > color #14.8/a:2556 steel blue
    30448 
    30449 > color #14.8/Y orchid
    30450 
    30451 > color #14.8/a:1955 pale green
    30452 
    30453 > color #14.8/a:2581 teal
    30454 
    30455 > color #14.8/a:2582 royal blue
    30456 
    30457 > color #14.8/a:2583 medium purple
    30458 
    30459 > color #14.8 white target c
    30460 
    30461 > name to_cartoon #14.8/a:2549-2559
    30462 
    30463 > name to_show #14.8/a:1955,2549-2559,2581-2584/Y:73-76
    30464 
    30465 > cartoon to_cartoon
    30466 
    30467 > show to_show
    30468 
    30469 > hide #14.8/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30470 
    30471 > hbonds to_show restrict to_show color yellow
    30472 
    30473 21 hydrogen bonds found 
    30474 
    30475 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J61_c8.png height 200 width
    30476 > 200 supersample 3
    30477 
    30478 > hide #!14.8 models
    30479 
    30480 > show #!14.9 models
    30481 
    30482 > hide #14.9
    30483 
    30484 > ~cartoon #14.9
    30485 
    30486 > color #14.9 white
    30487 
    30488 > color #14.9/a:2552 pale violet red
    30489 
    30490 > color #14.9/a:2553 khaki
    30491 
    30492 > color #14.9/a:2554 green yellow
    30493 
    30494 > color #14.9/a:2555 aquamarine
    30495 
    30496 > color #14.9/a:2556 steel blue
    30497 
    30498 > color #14.9/Y orchid
    30499 
    30500 > color #14.9/a:1955 pale green
    30501 
    30502 > color #14.9/a:2581 teal
    30503 
    30504 > color #14.9/a:2582 royal blue
    30505 
    30506 > color #14.9/a:2583 medium purple
    30507 
    30508 > color #14.9 white target c
    30509 
    30510 > name to_cartoon #14.9/a:2549-2559
    30511 
    30512 > name to_show #14.9/a:1955,2549-2559,2581-2584/Y:73-76
    30513 
    30514 > cartoon to_cartoon
    30515 
    30516 > show to_show
    30517 
    30518 > hide #14.9/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30519 
    30520 > hbonds to_show restrict to_show color yellow
    30521 
    30522 27 hydrogen bonds found 
    30523 
    30524 > save /Users/dalar193/Desktop/A_loop/A_loop_d10_J62_c9.png height 200 width
    30525 > 200 supersample 3
    30526 
    30527 > hide #!14.9 models
    30528 
    30529 > show #!22.1 models
    30530 
    30531 > hide #22.1
    30532 
    30533 > ~cartoon #22.1
    30534 
    30535 > color #22.1 white
    30536 
    30537 > color #22.1/a:2552 pale violet red
    30538 
    30539 > color #22.1/a:2553 khaki
    30540 
    30541 > color #22.1/a:2554 green yellow
    30542 
    30543 > color #22.1/a:2555 aquamarine
    30544 
    30545 > color #22.1/a:2556 steel blue
    30546 
    30547 > color #22.1/Y orchid
    30548 
    30549 > color #22.1/a:1955 pale green
    30550 
    30551 > color #22.1/a:2581 teal
    30552 
    30553 > color #22.1/a:2582 royal blue
    30554 
    30555 > color #22.1/a:2583 medium purple
    30556 
    30557 > color #22.1 white target c
    30558 
    30559 > name to_cartoon #22.1/a:2549-2559
    30560 
    30561 > name to_show #22.1/a:1955,2549-2559,2581-2584/Y:73-76
    30562 
    30563 > cartoon to_cartoon
    30564 
    30565 > show to_show
    30566 
    30567 > hide #22.1/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30568 
    30569 > hbonds to_show restrict to_show color yellow
    30570 
    30571 24 hydrogen bonds found 
    30572 
    30573 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J111_ape.png height 200 width
    30574 > 200 supersample 3
    30575 
    30576 > hide #!22.1 models
    30577 
    30578 > show #!22.2 models
    30579 
    30580 > hide #22.2
    30581 
    30582 > ~cartoon #22.2
    30583 
    30584 > color #22.2 white
    30585 
    30586 > color #22.2/a:2552 pale violet red
    30587 
    30588 > color #22.2/a:2553 khaki
    30589 
    30590 > color #22.2/a:2554 green yellow
    30591 
    30592 > color #22.2/a:2555 aquamarine
    30593 
    30594 > color #22.2/a:2556 steel blue
    30595 
    30596 > color #22.2/Y orchid
    30597 
    30598 > color #22.2/a:1955 pale green
    30599 
    30600 > color #22.2/a:2581 teal
    30601 
    30602 > color #22.2/a:2582 royal blue
    30603 
    30604 > color #22.2/a:2583 medium purple
    30605 
    30606 > color #22.2 white target c
    30607 
    30608 > name to_cartoon #22.2/a:2549-2559
    30609 
    30610 > name to_show #22.2/a:1955,2549-2559,2581-2584/Y:73-76
    30611 
    30612 > cartoon to_cartoon
    30613 
    30614 > show to_show
    30615 
    30616 > hide #22.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30617 
    30618 > hbonds to_show restrict to_show color yellow
    30619 
    30620 25 hydrogen bonds found 
    30621 
    30622 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J112_ap.png height 200 width
    30623 > 200 supersample 3
    30624 
    30625 > hide #!22.2 models
    30626 
    30627 > show #!22.3 models
    30628 
    30629 > hide #22.3
    30630 
    30631 > ~cartoon #22.3
    30632 
    30633 > color #22.3 white
    30634 
    30635 > color #22.3/a:2552 pale violet red
    30636 
    30637 > color #22.3/a:2553 khaki
    30638 
    30639 > color #22.3/a:2554 green yellow
    30640 
    30641 > color #22.3/a:2555 aquamarine
    30642 
    30643 > color #22.3/a:2556 steel blue
    30644 
    30645 > color #22.3/Y orchid
    30646 
    30647 > color #22.3/a:1955 pale green
    30648 
    30649 > color #22.3/a:2581 teal
    30650 
    30651 > color #22.3/a:2582 royal blue
    30652 
    30653 > color #22.3/a:2583 medium purple
    30654 
    30655 > color #22.3 white target c
    30656 
    30657 > name to_cartoon #22.3/a:2549-2559
    30658 
    30659 > name to_show #22.3/a:1955,2549-2559,2581-2584/Y:73-76
    30660 
    30661 > cartoon to_cartoon
    30662 
    30663 > show to_show
    30664 
    30665 > hide #22.3/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30666 
    30667 > hbonds to_show restrict to_show color yellow
    30668 
    30669 16 hydrogen bonds found 
    30670 
    30671 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J113_pe.png height 200 width
    30672 > 200 supersample 3
    30673 
    30674 > hide #!22.3 models
    30675 
    30676 > show #!22.4 models
    30677 
    30678 > hide #22.4
    30679 
    30680 > ~cartoon #22.4
    30681 
    30682 > color #22.4 white
    30683 
    30684 > color #22.4/a:2552 pale violet red
    30685 
    30686 > color #22.4/a:2553 khaki
    30687 
    30688 > color #22.4/a:2554 green yellow
    30689 
    30690 > color #22.4/a:2555 aquamarine
    30691 
    30692 > color #22.4/a:2556 steel blue
    30693 
    30694 > color #22.4/Y orchid
    30695 
    30696 > color #22.4/a:1955 pale green
    30697 
    30698 > color #22.4/a:2581 teal
    30699 
    30700 > color #22.4/a:2582 royal blue
    30701 
    30702 > color #22.4/a:2583 medium purple
    30703 
    30704 > color #22.4 white target c
    30705 
    30706 > name to_cartoon #22.4/a:2549-2559
    30707 
    30708 > name to_show #22.4/a:1955,2549-2559,2581-2584/Y:73-76
    30709 
    30710 > cartoon to_cartoon
    30711 
    30712 > show to_show
    30713 
    30714 > hide #22.4/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30715 
    30716 > hbonds to_show restrict to_show color yellow
    30717 
    30718 18 hydrogen bonds found 
    30719 
    30720 > save /Users/dalar193/Desktop/A_loop/A_loop_dE_J124_e.png height 200 width
    30721 > 200 supersample 3
    30722 
    30723 > hide #!22.4 models
    30724 
    30725 > show #!6.6 models
    30726 
    30727 > hide #!6.6 models
    30728 
    30729 > show #!6.4 models
    30730 
    30731 > show #!4.4 models
    30732 
    30733 > volume #12.4 level 0.41
    30734 
    30735 > volume #12.4 level 0.42
    30736 
    30737 > volume #4.4 level 0.45
    30738 
    30739 > volume #4.4 level 0.4
    30740 
    30741 > show #!6.2 models
    30742 
    30743 > hide #!6.4 models
    30744 
    30745 > hide #!4.4 models
    30746 
    30747 > show #!4.4 models
    30748 
    30749 > hide #!4.4 models
    30750 
    30751 > view A_loop
    30752 
    30753 > view A_loopview A_loop
    30754 
    30755 Expected an objects specifier or a view name or a keyword 
    30756 
    30757 > view A_loop
    30758 
    30759 > windowsize 600 600
    30760 
    30761 > view A_loop
    30762 
    30763 > windowsize 600 600
    30764 
    30765 > view A_loop
    30766 
    30767 > windowsize 600 600
    30768 
    30769 > view A_loop
    30770 
    30771 > hide #!6.2 models
    30772 
    30773 > show #!1.2 models
    30774 
    30775 > view A_loop
    30776 
    30777 > view name tmp
    30778 
    30779 > windowsize 600 600
    30780 
    30781 > view A_loop
    30782 
    30783 > windowsize 600 800
    30784 
    30785 > windowsize 600 600
    30786 
    30787 > windowsize 1000 600
    30788 
    30789 > view A_loop
    30790 
    30791 > view tmp
    30792 
    30793 > view name A_loop_A2602
    30794 
    30795 > view matrix
    30796 
    30797 view matrix camera
    30798 -0.72535,0.6179,-0.30342,114.54,0.60204,0.35569,-0.71487,124.22,-0.33379,-0.7012,-0.63,99.88 
    30799 view matrix models
    30800 #1,1,0,0,0,0,1,0,0,0,0,1,0,#1.3,1,0,0,0,0,1,0,0,0,0,1,0,#1.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.5,1,0,0,0,0,1,0,0,0,0,1,0,#1.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#1.6,1,0,0,0,0,1,0,0,0,0,1,0,#1.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.7,1,0,0,0,0,1,0,0,0,0,1,0,#1.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#1.8,1,0,0,0,0,1,0,0,0,0,1,0,#1.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.9,1,0,0,0,0,1,0,0,0,0,1,0,#1.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#1.10,1,0,0,0,0,1,0,0,0,0,1,0,#1.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.11,1,0,0,0,0,1,0,0,0,0,1,0,#1.11.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.11.2,1,0,0,0,0,1,0,0,0,0,1,0,#1.12,1,0,0,0,0,1,0,0,0,0,1,0,#1.12.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.12.2,1,0,0,0,0,1,0,0,0,0,1,0,#1.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.2,1,0,0,0,0,1,0,0,0,0,1,0,#1.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#1.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#2,1,0,0,0,0,1,0,0,0,0,1,0,#2.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.2,1,0,0,0,0,1,0,0,0,0,1,0,#2.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.3,1,0,0,0,0,1,0,0,0,0,1,0,#2.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.4,1,0,0,0,0,1,0,0,0,0,1,0,#2.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.5,1,0,0,0,0,1,0,0,0,0,1,0,#2.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#2.6,1,0,0,0,0,1,0,0,0,0,1,0,#2.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#3,1,0,0,0,0,1,0,0,0,0,1,0,#3.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.2,1,0,0,0,0,1,0,0,0,0,1,0,#3.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.3,1,0,0,0,0,1,0,0,0,0,1,0,#3.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.4,1,0,0,0,0,1,0,0,0,0,1,0,#3.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.5,1,0,0,0,0,1,0,0,0,0,1,0,#3.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#3.6,1,0,0,0,0,1,0,0,0,0,1,0,#3.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#4,1,0,0,0,0,1,0,0,0,0,1,0,#4.10,1,0,0,0,0,1,0,0,0,0,1,0,#4.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.2,1,0,0,0,0,1,0,0,0,0,1,0,#4.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.3,1,0,0,0,0,1,0,0,0,0,1,0,#4.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.4,1,0,0,0,0,1,0,0,0,0,1,0,#4.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.5,1,0,0,0,0,1,0,0,0,0,1,0,#4.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.6,1,0,0,0,0,1,0,0,0,0,1,0,#4.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.7,1,0,0,0,0,1,0,0,0,0,1,0,#4.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.8,1,0,0,0,0,1,0,0,0,0,1,0,#4.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#4.9,1,0,0,0,0,1,0,0,0,0,1,0,#4.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#5,1,0,0,0,0,1,0,0,0,0,1,0,#5.10,1,0,0,0,0,1,0,0,0,0,1,0,#5.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.2,1,0,0,0,0,1,0,0,0,0,1,0,#5.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.3,1,0,0,0,0,1,0,0,0,0,1,0,#5.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.4,1,0,0,0,0,1,0,0,0,0,1,0,#5.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.5,1,0,0,0,0,1,0,0,0,0,1,0,#5.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.6,1,0,0,0,0,1,0,0,0,0,1,0,#5.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.7,1,0,0,0,0,1,0,0,0,0,1,0,#5.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.8,1,0,0,0,0,1,0,0,0,0,1,0,#5.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#5.9,1,0,0,0,0,1,0,0,0,0,1,0,#5.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#6,1,0,0,0,0,1,0,0,0,0,1,0,#6.10,1,0,0,0,0,1,0,0,0,0,1,0,#6.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.10.3,1,0,0,0,0,1,0,0,0,0,1,0,#6.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#6.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.2.3,1,0,0,0,0,1,0,0,0,0,1,0,#6.3,1,0,0,0,0,1,0,0,0,0,1,0,#6.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.3.3,1,0,0,0,0,1,0,0,0,0,1,0,#6.4,1,0,0,0,0,1,0,0,0,0,1,0,#6.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.4.3,1,0,0,0,0,1,0,0,0,0,1,0,#6.5,1,0,0,0,0,1,0,0,0,0,1,0,#6.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.5.3,1,0,0,0,0,1,0,0,0,0,1,0,#6.6,1,0,0,0,0,1,0,0,0,0,1,0,#6.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.6.3,1,0,0,0,0,1,0,0,0,0,1,0,#6.7,1,0,0,0,0,1,0,0,0,0,1,0,#6.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.7.3,1,0,0,0,0,1,0,0,0,0,1,0,#6.8,1,0,0,0,0,1,0,0,0,0,1,0,#6.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.8.3,1,0,0,0,0,1,0,0,0,0,1,0,#6.9,1,0,0,0,0,1,0,0,0,0,1,0,#6.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#6.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#6.9.3,1,0,0,0,0,1,0,0,0,0,1,0,#10,1,0,0,0,0,1,0,0,0,0,1,0,#10.1,1,0,0,0,0,1,0,0,0,0,1,0,#10.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#10.2,1,0,0,0,0,1,0,0,0,0,1,0,#10.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#10.3,1,0,0,0,0,1,0,0,0,0,1,0,#10.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#11,1,0,0,0,0,1,0,0,0,0,1,0,#11.1,1,0,0,0,0,1,0,0,0,0,1,0,#11.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#11.2,1,0,0,0,0,1,0,0,0,0,1,0,#11.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#11.3,1,0,0,0,0,1,0,0,0,0,1,0,#11.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#12,1,0,0,0,0,1,0,0,0,0,1,0,#12.10,1,0,0,0,0,1,0,0,0,0,1,0,#12.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.2,1,0,0,0,0,1,0,0,0,0,1,0,#12.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.3,1,0,0,0,0,1,0,0,0,0,1,0,#12.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.4,1,0,0,0,0,1,0,0,0,0,1,0,#12.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.5,1,0,0,0,0,1,0,0,0,0,1,0,#12.5.1,1,0,0,0,0,1,0,0,0,0,1,0,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    30801  
    30802 
    30803 > clip list
    30804 
    30805 Using 2 clip planes: 
    30806 near offset -13.211, axis 0.303,0.715,0.630, point 133.5,168.9,139.3) 
    30807 far offset 8.7722, axis -0.303,-0.715,-0.630, point 140.2,184.6,153.1) 
    30808 
    30809 > show #1.2/a
    30810 
    30811 > view A_loop_A2602
    30812 
    30813 > hide #!1.2 models
    30814 
    30815 > show #!2.4 models
    30816 
    30817 > hide #!2.4 models
    30818 
    30819 > show #!6.3 models
    30820 
    30821 > hide #!6.3 models
    30822 
    30823 > show #!6.2 models
    30824 
    30825 > hide #!6.2 models
    30826 
    30827 > show #!6.1 models
    30828 
    30829 > hide #!6.1 models
    30830 
    30831 > show #!6.2 models
    30832 
    30833 > hide #!6.2 models
    30834 
    30835 > show #!6.3 models
    30836 
    30837 > hide #!6.3 models
    30838 
    30839 > show #!6.4 models
    30840 
    30841 > hide #!6.4 models
    30842 
    30843 > show #!6.5 models
    30844 
    30845 > hide #!6.5 models
    30846 
    30847 > show #!6.6 models
    30848 
    30849 > hide #!6.6 models
    30850 
    30851 > show #!6.7 models
    30852 
    30853 > hide #!6.7 models
    30854 
    30855 > show #!6.1 models
    30856 
    30857 > show #6.1/a
    30858 
    30859 > show #6.1/a,v
    30860 
    30861 > view A_loop_A2602
    30862 
    30863 > name to_show #6.1/a:1955,2549-2559,2581-2584/Y:73-76
    30864 
    30865 "#6.1/a:1955,2549-2559,2581-2584/Y:73-76 ": contains extra trailing text 
    30866 
    30867 > name to_show #6.1/a:1955,2549-2559,2581-2584/Y:73-76
    30868 
    30869 > hide #6.1
    30870 
    30871 > show to_show
    30872 
    30873 > show #6.1/a:2601
    30874 
    30875 > show #6.1/a:2602
    30876 
    30877 > hide #6.1/a:2601
    30878 
    30879 > show #6.1/v:2-5
    30880 
    30881 > view A_loop_2602
    30882 
    30883 Expected an objects specifier or a view name or a keyword 
    30884 
    30885 > view A_loop_2601
    30886 
    30887 Expected an objects specifier or a view name or a keyword 
    30888 
    30889 > view A_loop_A2602
    30890 
    30891 > hide #6.1/a:2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30892 
    30893 > color #6.1/a:2602 olive
    30894 
    30895 > color #6.1/a:2602 green
    30896 
    30897 > color #6.1/a:2602 blue
    30898 
    30899 > color #6.1/a:2602 cyan
    30900 
    30901 [Repeated 1 time(s)]
    30902 
    30903 > color #6.1/v:3 magenta
    30904 
    30905 > view A_loop_A2602
    30906 
    30907 > hide #6.1/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30908 
    30909 > view name tmp
    30910 
    30911 > hide #!6.1 models
    30912 
    30913 > graphics quality 6
    30914 
    30915 > show #!1.2 models
    30916 
    30917 > hide #1.2
    30918 
    30919 > ~cartoon #1.2
    30920 
    30921 > color #1.2 white
    30922 
    30923 > color #1.2/a:2552 pale violet red
    30924 
    30925 > color #1.2/a:2553 khaki
    30926 
    30927 > color #1.2/a:2554 green yellow
    30928 
    30929 > color #1.2/a:2555 aquamarine
    30930 
    30931 > color #1.2/a:2556 steel blue
    30932 
    30933 > color #1.2/Y orchid
    30934 
    30935 > color #1.2/a:1955 pale green
    30936 
    30937 > color #1.2/a:2581 teal
    30938 
    30939 > color #1.2/a:2582 royal blue
    30940 
    30941 > color #1.2/a:2583 medium purple
    30942 
    30943 > color #1.2 white target c
    30944 
    30945 > color #1.2/a:2602 cyan
    30946 
    30947 > color #1.2/v:3 magenta
    30948 
    30949 > name to_cartoon #1.2/a:2549-2559
    30950 
    30951 > name to_show #1.2/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    30952 
    30953 > cartoon to_cartoon
    30954 
    30955 > show to_show
    30956 
    30957 > hide #1.2/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    30958 
    30959 > hbonds to_show restrict to_show color yellow
    30960 
    30961 24 hydrogen bonds found 
    30962 
    30963 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 200 width 200
    30964 > supersample 3
    30965 
    30966 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    30967 
    30968 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 200 width 200
    30969 > supersample 3
    30970 
    30971 > hide #!1.2 models
    30972 
    30973 > graphics quality 6
    30974 
    30975 > show #!1.2 models
    30976 
    30977 > hide #1.2
    30978 
    30979 > ~cartoon #1.2
    30980 
    30981 > color #1.2 white
    30982 
    30983 > color #1.2/a:2552 pale violet red
    30984 
    30985 > color #1.2/a:2553 khaki
    30986 
    30987 > color #1.2/a:2554 green yellow
    30988 
    30989 > color #1.2/a:2555 aquamarine
    30990 
    30991 > color #1.2/a:2556 steel blue
    30992 
    30993 > color #1.2/Y orchid
    30994 
    30995 > color #1.2/a:1955 pale green
    30996 
    30997 > color #1.2/a:2581 teal
    30998 
    30999 > color #1.2/a:2582 royal blue
    31000 
    31001 > color #1.2/a:2583 medium purple
    31002 
    31003 > color #1.2 white target c
    31004 
    31005 > name to_cartoon #1.2/a:2549-2559
    31006 
    31007 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    31008 
    31009 > cartoon to_cartoon
    31010 
    31011 > show to_show
    31012 
    31013 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    31014 
    31015 > hbonds to_show restrict to_show color yellow
    31016 
    31017 24 hydrogen bonds found 
    31018 
    31019 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 200 width 200
    31020 > supersample 3
    31021 
    31022 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    31023 
    31024 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 200 width 200
    31025 > supersample 3
    31026 
    31027 > hide #!1.2 models
    31028 
    31029 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    31030 > supersample 3
    31031 
    31032 > show #!1.2 models
    31033 
    31034 > hide #1.2
    31035 
    31036 > ~cartoon #1.2
    31037 
    31038 > color #1.2 white
    31039 
    31040 > color #1.2/a:2552 pale violet red
    31041 
    31042 > color #1.2/a:2553 khaki
    31043 
    31044 > color #1.2/a:2554 green yellow
    31045 
    31046 > color #1.2/a:2555 aquamarine
    31047 
    31048 > color #1.2/a:2556 steel blue
    31049 
    31050 > color #1.2/Y orchid
    31051 
    31052 > color #1.2/a:1955 pale green
    31053 
    31054 > color #1.2/a:2581 teal
    31055 
    31056 > color #1.2/a:2582 royal blue
    31057 
    31058 > color #1.2/a:2583 medium purple
    31059 
    31060 > color #1.2 white target c
    31061 
    31062 > color #1.2/a:2602 cyan
    31063 
    31064 > color #1.2/v:3 magenta
    31065 
    31066 > name to_cartoon #1.2/a:2549-2559
    31067 
    31068 > name to_show #1.2/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    31069 
    31070 > cartoon to_cartoon
    31071 
    31072 > show to_show
    31073 
    31074 > hide #1.2/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    31075 
    31076 > hbonds to_show restrict to_show color yellow
    31077 
    31078 24 hydrogen bonds found 
    31079 
    31080 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 200 width 200
    31081 > supersample 3
    31082 
    31083 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    31084 
    31085 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 200 width 200
    31086 > supersample 3
    31087 
    31088 > hide #!1.2 models
    31089 
    31090 > graphics quality 6
    31091 
    31092 > show #!1.2 models
    31093 
    31094 > hide #1.2
    31095 
    31096 > ~cartoon #1.2
    31097 
    31098 > color #1.2 white
    31099 
    31100 > color #1.2/a:2552 pale violet red
    31101 
    31102 > color #1.2/a:2553 khaki
    31103 
    31104 > color #1.2/a:2554 green yellow
    31105 
    31106 > color #1.2/a:2555 aquamarine
    31107 
    31108 > color #1.2/a:2556 steel blue
    31109 
    31110 > color #1.2/Y orchid
    31111 
    31112 > color #1.2/a:1955 pale green
    31113 
    31114 > color #1.2/a:2581 teal
    31115 
    31116 > color #1.2/a:2582 royal blue
    31117 
    31118 > color #1.2/a:2583 medium purple
    31119 
    31120 > color #1.2 white target c
    31121 
    31122 > name to_cartoon #1.2/a:2549-2559
    31123 
    31124 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    31125 
    31126 > cartoon to_cartoon
    31127 
    31128 > show to_show
    31129 
    31130 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    31131 
    31132 > hbonds to_show restrict to_show color yellow
    31133 
    31134 24 hydrogen bonds found 
    31135 
    31136 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    31137 > supersample 3
    31138 
    31139 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    31140 
    31141 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    31142 > supersample 3
    31143 
    31144 > hide #!1.2 models
    31145 
    31146 > windowsize 600 600
    31147 
    31148 > graphics quality 6
    31149 
    31150 > show #!1.2 models
    31151 
    31152 > hide #1.2
    31153 
    31154 > ~cartoon #1.2
    31155 
    31156 > color #1.2 white
    31157 
    31158 > color #1.2/a:2552 pale violet red
    31159 
    31160 > color #1.2/a:2553 khaki
    31161 
    31162 > color #1.2/a:2554 green yellow
    31163 
    31164 > color #1.2/a:2555 aquamarine
    31165 
    31166 > color #1.2/a:2556 steel blue
    31167 
    31168 > color #1.2/Y orchid
    31169 
    31170 > color #1.2/a:1955 pale green
    31171 
    31172 > color #1.2/a:2581 teal
    31173 
    31174 > color #1.2/a:2582 royal blue
    31175 
    31176 > color #1.2/a:2583 medium purple
    31177 
    31178 > color #1.2 white target c
    31179 
    31180 > name to_cartoon #1.2/a:2549-2559
    31181 
    31182 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    31183 
    31184 > cartoon to_cartoon
    31185 
    31186 > show to_show
    31187 
    31188 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    31189 
    31190 > hbonds to_show restrict to_show color yellow
    31191 
    31192 24 hydrogen bonds found 
    31193 
    31194 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    31195 > supersample 3
    31196 
    31197 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    31198 
    31199 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    31200 > supersample 3
    31201 
    31202 > hide #!1.2 models
    31203 
    31204 > view A_loop
    31205 
    31206 > graphics quality 6
    31207 
    31208 > show #!1.2 models
    31209 
    31210 > hide #1.2
    31211 
    31212 > ~cartoon #1.2
    31213 
    31214 > color #1.2 white
    31215 
    31216 > color #1.2/a:2552 pale violet red
    31217 
    31218 > color #1.2/a:2553 khaki
    31219 
    31220 > color #1.2/a:2554 green yellow
    31221 
    31222 > color #1.2/a:2555 aquamarine
    31223 
    31224 > color #1.2/a:2556 steel blue
    31225 
    31226 > color #1.2/Y orchid
    31227 
    31228 > color #1.2/a:1955 pale green
    31229 
    31230 > color #1.2/a:2581 teal
    31231 
    31232 > color #1.2/a:2582 royal blue
    31233 
    31234 > color #1.2/a:2583 medium purple
    31235 
    31236 > color #1.2 white target c
    31237 
    31238 > name to_cartoon #1.2/a:2549-2559
    31239 
    31240 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    31241 
    31242 > cartoon to_cartoon
    31243 
    31244 > show to_show
    31245 
    31246 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    31247 
    31248 > hbonds to_show restrict to_show color yellow
    31249 
    31250 24 hydrogen bonds found 
    31251 
    31252 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    31253 > supersample 3
    31254 
    31255 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    31256 
    31257 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    31258 > supersample 3
    31259 
    31260 > hide #!1.2 models
    31261 
    31262 > graphics silhouettes false
    31263 
    31264 > graphics silhouettes true
    31265 
    31266 > graphics quality 6
    31267 
    31268 > show #!1.2 models
    31269 
    31270 > hide #1.2
    31271 
    31272 > ~cartoon #1.2
    31273 
    31274 > color #1.2 white
    31275 
    31276 > color #1.2/a:2552 pale violet red
    31277 
    31278 > color #1.2/a:2553 khaki
    31279 
    31280 > color #1.2/a:2554 green yellow
    31281 
    31282 > color #1.2/a:2555 aquamarine
    31283 
    31284 > color #1.2/a:2556 steel blue
    31285 
    31286 > color #1.2/Y orchid
    31287 
    31288 > color #1.2/a:1955 pale green
    31289 
    31290 > color #1.2/a:2581 teal
    31291 
    31292 > color #1.2/a:2582 royal blue
    31293 
    31294 > color #1.2/a:2583 medium purple
    31295 
    31296 > color #1.2 white target c
    31297 
    31298 > name to_cartoon #1.2/a:2549-2559
    31299 
    31300 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    31301 
    31302 > cartoon to_cartoon
    31303 
    31304 > show to_show
    31305 
    31306 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    31307 
    31308 > hbonds to_show restrict to_show color yellow
    31309 
    31310 24 hydrogen bonds found 
    31311 
    31312 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    31313 > supersample 3
    31314 
    31315 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    31316 
    31317 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    31318 > supersample 3
    31319 
    31320 > hide #!1.2 models
    31321 
    31322 > graphics silhouettes true color black
    31323 
    31324 > graphics quality 6
    31325 
    31326 > show #!1.2 models
    31327 
    31328 > hide #1.2
    31329 
    31330 > ~cartoon #1.2
    31331 
    31332 > color #1.2 white
    31333 
    31334 > color #1.2/a:2552 pale violet red
    31335 
    31336 > color #1.2/a:2553 khaki
    31337 
    31338 > color #1.2/a:2554 green yellow
    31339 
    31340 > color #1.2/a:2555 aquamarine
    31341 
    31342 > color #1.2/a:2556 steel blue
    31343 
    31344 > color #1.2/Y orchid
    31345 
    31346 > color #1.2/a:1955 pale green
    31347 
    31348 > color #1.2/a:2581 teal
    31349 
    31350 > color #1.2/a:2582 royal blue
    31351 
    31352 > color #1.2/a:2583 medium purple
    31353 
    31354 > color #1.2 white target c
    31355 
    31356 > name to_cartoon #1.2/a:2549-2559
    31357 
    31358 > name to_show #1.2/a:1955,2549-2559,2581-2584/Y:73-76
    31359 
    31360 > cartoon to_cartoon
    31361 
    31362 > show to_show
    31363 
    31364 > hide #1.2/a:1955@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    31365 
    31366 > hbonds to_show restrict to_show color yellow
    31367 
    31368 24 hydrogen bonds found 
    31369 
    31370 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    31371 > supersample 3
    31372 
    31373 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    31374 
    31375 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 600 width 600
    31376 > supersample 3
    31377 
    31378 > hide #!1.2 models
    31379 
    31380 > show #!6.1 models
    31381 
    31382 > windowsize 1000 600
    31383 
    31384 > view matrix camera
    31385 > -0.72535,0.6179,-0.30342,114.54,0.60204,0.35569,-0.71487,124.22,-0.33379,-0.7012,-0.63,99.88
    31386 
    31387 > clip near -13.211 far 8.7722
    31388 
    31389 [Repeated 5 time(s)]
    31390 
    31391 > clip front -13.211 back 8.7722
    31392 
    31393 [Repeated 1 time(s)]
    31394 
    31395 > clip near -13.211 far 8.7722
    31396 
    31397 > clip front -13.211 back 8.7722
    31398 
    31399 [Repeated 1 time(s)]
    31400 
    31401 > clip list
    31402 
    31403 Using 4 clip planes: 
    31404 near offset -131.38, axis 0.303,0.715,0.630, point 96.59,81.93,62.61) 
    31405 far offset 44.492, axis -0.303,-0.715,-0.630, point 149.9,207.7,173.4) 
    31406 front offset -52.844, axis 0.303,0.715,0.630, point 125.8,134.8,113.2) 
    31407 back offset 35.089, axis -0.303,-0.715,-0.630, point 152.5,197.6,168.6) 
    31408 
    31409 > clip near off
    31410 
    31411 > clip far off
    31412 
    31413 > clip list
    31414 
    31415 Using 2 clip planes: 
    31416 front offset -52.844, axis 0.303,0.715,0.630, point 125.8,134.8,113.2) 
    31417 back offset 35.089, axis -0.303,-0.715,-0.630, point 152.5,197.6,168.6) 
    31418 
    31419 > clip off
    31420 
    31421 > ui tool show "Side View"
    31422 
    31423 > clip front -13.211 back 8.7722
    31424 
    31425 [Repeated 2 time(s)]
    31426 
    31427 > clip list
    31428 
    31429 Using 4 clip planes: 
    31430 front offset -39.633, axis 0.303,0.715,0.630, point 129.8,144.2,121.5) 
    31431 back offset 26.317, axis -0.303,-0.715,-0.630, point 149.9,191.4,163.1) 
    31432 near offset -6.3081, axis 0.303,0.715,0.630, point 134.5,171.4,141.4) 
    31433 far offset 7.3562, axis -0.303,-0.715,-0.630, point 138.7,181.1,150) 
    31434 
    31435 > clip off
    31436 
    31437 > view A_loop_A2602
    31438 
    31439 > view list
    31440 
    31441 Named views: 76A_sandwich, A_loop, A_loop_A2602, del9_PTC_overview,
    31442 del9_overview, ssu_rotation, tmp 
    31443 
    31444 > clip list
    31445 
    31446 Using 2 clip planes: 
    31447 near offset -9.7198, axis 0.303,0.715,0.630, point 133.5,168.9,139.3) 
    31448 far offset 12.264, axis -0.303,-0.715,-0.630, point 140.2,184.6,153.1) 
    31449 
    31450 > clip near offset -9.7198, axis 0.303,0.715,0.630, point 133.5,168.9,139.3
    31451 
    31452 Invalid "near" argument: Expected 'off' or a number 
    31453 
    31454 > clip near -9.7198 axis 0.303,0.715,0.630 point 133.5,168.9,139.3
    31455 
    31456 Expected a keyword 
    31457 
    31458 > clip near -9.7198 axis 0.303,0.715,0.630 position 133.5,168.9,139.3
    31459 
    31460 [Repeated 3 time(s)]
    31461 
    31462 > clip far 12.264 axis -0.303,-0.715,-0.630 position 140.2,184.6,153.1
    31463 
    31464 > view A_loop_A2602
    31465 
    31466 > clip list
    31467 
    31468 Using 2 clip planes: 
    31469 near offset -9.7198, axis 0.303,0.715,0.630, point 133.5,168.9,139.3) 
    31470 far offset 12.264, axis -0.303,-0.715,-0.630, point 140.2,184.6,153.1) 
    31471 
    31472 > clip near -9.7198 axis 0.303,0.715,0.630 position 133.5,168.9,139.3
    31473 
    31474 > clip far 12.264 axis -0.303,-0.715,-0.630 position 140.2,184.6,153.1
    31475 
    31476 > clip far 12.264 axis -0.303,-0.715,-0.630 position 140.2,184.6,153.1
    31477 
    31478 > clip near -9.7198 axis 0.303,0.715,0.630 position 133.5,168.9,139.3
    31479 
    31480 > clip list
    31481 
    31482 Using 2 clip planes: 
    31483 near offset -19.413, axis 0.303,0.715,0.630, point 130.6,162,133.2) 
    31484 far offset 24.521, axis -0.303,-0.715,-0.630, point 143.9,193.4,160.8) 
    31485 
    31486 > select down
    31487 
    31488 Nothing selected 
    31489 
    31490 > select down
    31491 
    31492 Nothing selected 
    31493 
    31494 > select down
    31495 
    31496 Nothing selected 
    31497 
    31498 > clip near -9.7198 axis 0.303,0.715,0.630 position 133.5,168.9,139.3
    31499 
    31500 > clip near -9.7198 axis 0.303,0.715,0.630 position 133.5,168.9,139.3
    31501 
    31502 > clip list
    31503 
    31504 Using 2 clip planes: 
    31505 near offset -19.413, axis 0.303,0.715,0.630, point 130.6,162,133.2) 
    31506 far offset 24.521, axis -0.303,-0.715,-0.630, point 143.9,193.4,160.8) 
    31507 
    31508 > view A_loop_A2602
    31509 
    31510 > view matrix
    31511 
    31512 view matrix camera
    31513 -0.72535,0.6179,-0.30342,114.54,0.60204,0.35569,-0.71487,124.22,-0.33379,-0.7012,-0.63,99.88 
    31514 view matrix models
    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    31516  
    31517 
    31518 > clip list
    31519 
    31520 Using 2 clip planes: 
    31521 near offset -9.7198, axis 0.303,0.715,0.630, point 133.5,168.9,139.3) 
    31522 far offset 12.264, axis -0.303,-0.715,-0.630, point 140.2,184.6,153.1) 
    31523 
    31524 > volume style mesh
    31525 
    31526 > nucleotides atoms
    31527 
    31528 > windowsize 1000 600
    31529 
    31530 > lighting simple
    31531 
    31532 > graphics silhouettes true color black
    31533 
    31534 > view A_loop_A2602
    31535 
    31536 > hide #!6.1 models
    31537 
    31538 > show #!1.2 models
    31539 
    31540 > hide #1.2
    31541 
    31542 > ~cartoon #1.2
    31543 
    31544 > color #1.2 white
    31545 
    31546 > color #1.2/a:2552 pale violet red
    31547 
    31548 > color #1.2/a:2553 khaki
    31549 
    31550 > color #1.2/a:2554 green yellow
    31551 
    31552 > color #1.2/a:2555 aquamarine
    31553 
    31554 > color #1.2/a:2556 steel blue
    31555 
    31556 > color #1.2/Y orchid
    31557 
    31558 > color #1.2/a:1955 pale green
    31559 
    31560 > color #1.2/a:2581 teal
    31561 
    31562 > color #1.2/a:2582 royal blue
    31563 
    31564 > color #1.2/a:2583 medium purple
    31565 
    31566 > color #1.2 white target c
    31567 
    31568 > color #1.2/a:2602 cyan
    31569 
    31570 > color #1.2/v:3 magenta
    31571 
    31572 > name to_cartoon #1.2/a:2549-2559
    31573 
    31574 > name to_show #1.2/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    31575 
    31576 > cartoon to_cartoon
    31577 
    31578 > show to_show
    31579 
    31580 > hide #1.2/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    31581 
    31582 > hbonds to_show restrict to_show color yellow
    31583 
    31584 24 hydrogen bonds found 
    31585 
    31586 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_8emm.png height 1000
    31587 > width 600 supersample 3
    31588 
    31589 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    31590 
    31591 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 200 width 200
    31592 > supersample 3
    31593 
    31594 Directory "/Users/dalar193/Desktop/A_loop" does not exist 
    31595 
    31596 > hide #!1.2 models
    31597 
    31598 > show #!1.2 models
    31599 
    31600 > hide #1.2
    31601 
    31602 > ~cartoon #1.2
    31603 
    31604 > color #1.2 white
    31605 
    31606 > color #1.2/a:2552 pale violet red
    31607 
    31608 > color #1.2/a:2553 khaki
    31609 
    31610 > color #1.2/a:2554 green yellow
    31611 
    31612 > color #1.2/a:2555 aquamarine
    31613 
    31614 > color #1.2/a:2556 steel blue
    31615 
    31616 > color #1.2/Y orchid
    31617 
    31618 > color #1.2/a:1955 pale green
    31619 
    31620 > color #1.2/a:2581 teal
    31621 
    31622 > color #1.2/a:2582 royal blue
    31623 
    31624 > color #1.2/a:2583 medium purple
    31625 
    31626 > color #1.2 white target c
    31627 
    31628 > color #1.2/a:2602 cyan
    31629 
    31630 > color #1.2/v:3 magenta
    31631 
    31632 > name to_cartoon #1.2/a:2549-2559
    31633 
    31634 > name to_show #1.2/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    31635 
    31636 > cartoon to_cartoon
    31637 
    31638 > show to_show
    31639 
    31640 > hide #1.2/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    31641 
    31642 > hbonds to_show restrict to_show color yellow
    31643 
    31644 24 hydrogen bonds found 
    31645 
    31646 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_8emm.png height 600
    31647 > width 1000 supersample 3
    31648 
    31649 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    31650 
    31651 > save /Users/dalar193/Desktop/A_loop/A_loop_8emm.png height 200 width 200
    31652 > supersample 3
    31653 
    31654 Directory "/Users/dalar193/Desktop/A_loop" does not exist 
    31655 
    31656 > hide #!1.2 models
    31657 
    31658 > volume style mesh
    31659 
    31660 > nucleotides atoms
    31661 
    31662 > windowsize 1000 600
    31663 
    31664 > lighting simple
    31665 
    31666 > graphics silhouettes true color black
    31667 
    31668 > view A_loop_A2602
    31669 
    31670 > show #!1.2 models
    31671 
    31672 > hide #1.2
    31673 
    31674 > ~cartoon #1.2
    31675 
    31676 > color #1.2 white
    31677 
    31678 > color #1.2/a:2552 pale violet red
    31679 
    31680 > color #1.2/a:2553 khaki
    31681 
    31682 > color #1.2/a:2554 green yellow
    31683 
    31684 > color #1.2/a:2555 aquamarine
    31685 
    31686 > color #1.2/a:2556 steel blue
    31687 
    31688 > color #1.2/Y orchid
    31689 
    31690 > color #1.2/a:1955 pale green
    31691 
    31692 > color #1.2/a:2581 teal
    31693 
    31694 > color #1.2/a:2582 royal blue
    31695 
    31696 > color #1.2/a:2583 medium purple
    31697 
    31698 > color #1.2 white target c
    31699 
    31700 > color #1.2/a:2602 cyan
    31701 
    31702 > color #1.2/v:3 magenta
    31703 
    31704 > name to_cartoon #1.2/a:2549-2559
    31705 
    31706 > name to_show #1.2/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    31707 
    31708 > cartoon to_cartoon
    31709 
    31710 > show to_show
    31711 
    31712 > hide #1.2/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    31713 
    31714 > hbonds to_show restrict to_show color yellow
    31715 
    31716 24 hydrogen bonds found 
    31717 
    31718 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_8emm.png height 600
    31719 > width 1000 supersample 3
    31720 
    31721 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    31722 
    31723 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_8emm.png height 600
    31724 > width 1000 supersample 3
    31725 
    31726 > hide #!1.2 models
    31727 
    31728 > show #!1.7 models
    31729 
    31730 > hide #1.7
    31731 
    31732 > ~cartoon #1.7
    31733 
    31734 > color #1.7 white
    31735 
    31736 > color #1.7/a:2552 pale violet red
    31737 
    31738 > color #1.7/a:2553 khaki
    31739 
    31740 > color #1.7/a:2554 green yellow
    31741 
    31742 > color #1.7/a:2555 aquamarine
    31743 
    31744 > color #1.7/a:2556 steel blue
    31745 
    31746 > color #1.7/Y orchid
    31747 
    31748 > color #1.7/a:1955 pale green
    31749 
    31750 > color #1.7/a:2581 teal
    31751 
    31752 > color #1.7/a:2582 royal blue
    31753 
    31754 > color #1.7/a:2583 medium purple
    31755 
    31756 > color #1.7 white target c
    31757 
    31758 > color #1.7/a:2602 cyan
    31759 
    31760 > color #1.7/v:3 magenta
    31761 
    31762 > name to_cartoon #1.7/a:2549-2559
    31763 
    31764 > name to_show #1.7/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    31765 
    31766 > cartoon to_cartoon
    31767 
    31768 > show to_show
    31769 
    31770 > hide #1.7/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    31771 
    31772 > hbonds to_show restrict to_show color yellow
    31773 
    31774 17 hydrogen bonds found 
    31775 
    31776 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_8cgk.png height 600
    31777 > width 1000 supersample 3
    31778 
    31779 > hide #!1.7 models
    31780 
    31781 > show #!1.9 models
    31782 
    31783 > hide #1.9
    31784 
    31785 > ~cartoon #1.9
    31786 
    31787 > color #1.9 white
    31788 
    31789 > color #1.9/A:2552 pale violet red
    31790 
    31791 > color #1.9/A:2553 khaki
    31792 
    31793 > color #1.9/A:2554 green yellow
    31794 
    31795 > color #1.9/A:2555 aquamarine
    31796 
    31797 > color #1.9/A:2556 steel blue
    31798 
    31799 > color #1.9/Y orchid
    31800 
    31801 > color #1.9/A:1955 pale green
    31802 
    31803 > color #1.9/A:2581 teal
    31804 
    31805 > color #1.9/A:2582 royal blue
    31806 
    31807 > color #1.9/A:2583 medium purple
    31808 
    31809 > color #1.9 white target c
    31810 
    31811 > color #1.9/A:2602 cyan
    31812 
    31813 > color #1.9/v:3 magenta
    31814 
    31815 > name to_cartoon #1.9/A:2549-2559
    31816 
    31817 > name to_show #1.9/A:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    31818 
    31819 > cartoon to_cartoon
    31820 
    31821 > show to_show
    31822 
    31823 > hide #1.9/A:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    31824 
    31825 > hbonds to_show restrict to_show color yellow
    31826 
    31827 25 hydrogen bonds found 
    31828 
    31829 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_7bv8.png height 600
    31830 > width 1000 supersample 3
    31831 
    31832 > hide #!1.9 models
    31833 
    31834 > show #!1.11 models
    31835 
    31836 > hide #1.11
    31837 
    31838 > ~cartoon #1.11
    31839 
    31840 > color #1.11 white
    31841 
    31842 > color #1.11/BA:2552 pale violet red
    31843 
    31844 > color #1.11/BA:2553 khaki
    31845 
    31846 > color #1.11/BA:2554 green yellow
    31847 
    31848 > color #1.11/BA:2555 aquamarine
    31849 
    31850 > color #1.11/BA:2556 steel blue
    31851 
    31852 > color #1.11/Y orchid
    31853 
    31854 > color #1.11/BA:1955 pale green
    31855 
    31856 > color #1.11/BA:2581 teal
    31857 
    31858 > color #1.11/BA:2582 royal blue
    31859 
    31860 > color #1.11/BA:2583 medium purple
    31861 
    31862 > color #1.11 white target c
    31863 
    31864 > color #1.11/BA:2602 cyan
    31865 
    31866 > color #1.11/v:3 magenta
    31867 
    31868 > name to_cartoon #1.11/BA:2549-2559
    31869 
    31870 > name to_show #1.11/BA:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    31871 
    31872 > cartoon to_cartoon
    31873 
    31874 > show to_show
    31875 
    31876 > hide #1.11/BA:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    31877 
    31878 > hbonds to_show restrict to_show color yellow
    31879 
    31880 17 hydrogen bonds found 
    31881 
    31882 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_7o1a.png height 600
    31883 > width 1000 supersample 3
    31884 
    31885 > hide #!1.11 models
    31886 
    31887 > show #!6.10 models
    31888 
    31889 > hide #6.10
    31890 
    31891 > ~cartoon #6.10
    31892 
    31893 > color #6.10 white
    31894 
    31895 > color #6.10/a:2552 pale violet red
    31896 
    31897 > color #6.10/a:2553 khaki
    31898 
    31899 > color #6.10/a:2554 green yellow
    31900 
    31901 > color #6.10/a:2555 aquamarine
    31902 
    31903 > color #6.10/a:2556 steel blue
    31904 
    31905 > color #6.10/Y orchid
    31906 
    31907 > color #6.10/a:1955 pale green
    31908 
    31909 > color #6.10/a:2581 teal
    31910 
    31911 > color #6.10/a:2582 royal blue
    31912 
    31913 > color #6.10/a:2583 medium purple
    31914 
    31915 > color #6.10 white target c
    31916 
    31917 > color #6.10/a:2602 cyan
    31918 
    31919 > color #6.10/v:3 magenta
    31920 
    31921 > name to_cartoon #6.10/a:2549-2559
    31922 
    31923 > name to_show #6.10/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    31924 
    31925 > cartoon to_cartoon
    31926 
    31927 > show to_show
    31928 
    31929 > hide #6.10/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    31930 
    31931 > hbonds to_show restrict to_show color yellow
    31932 
    31933 17 hydrogen bonds found 
    31934 
    31935 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d9_J83_cl0.png height
    31936 > 600 width 1000 supersample 3
    31937 
    31938 > hide #!6.10 models
    31939 
    31940 > show #!6.1 models
    31941 
    31942 > hide #6.1
    31943 
    31944 > ~cartoon #6.1
    31945 
    31946 > color #6.1 white
    31947 
    31948 > color #6.1/a:2552 pale violet red
    31949 
    31950 > color #6.1/a:2553 khaki
    31951 
    31952 > color #6.1/a:2554 green yellow
    31953 
    31954 > color #6.1/a:2555 aquamarine
    31955 
    31956 > color #6.1/a:2556 steel blue
    31957 
    31958 > color #6.1/Y orchid
    31959 
    31960 > color #6.1/a:1955 pale green
    31961 
    31962 > color #6.1/a:2581 teal
    31963 
    31964 > color #6.1/a:2582 royal blue
    31965 
    31966 > color #6.1/a:2583 medium purple
    31967 
    31968 > color #6.1 white target c
    31969 
    31970 > color #6.1/a:2602 cyan
    31971 
    31972 > color #6.1/v:3 magenta
    31973 
    31974 > name to_cartoon #6.1/a:2549-2559
    31975 
    31976 > name to_show #6.1/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    31977 
    31978 > cartoon to_cartoon
    31979 
    31980 > show to_show
    31981 
    31982 > hide #6.1/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    31983 
    31984 > hbonds to_show restrict to_show color yellow
    31985 
    31986 22 hydrogen bonds found 
    31987 
    31988 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d9_J84_cl1.png height
    31989 > 600 width 1000 supersample 3
    31990 
    31991 > hide #!6.1 models
    31992 
    31993 > show #!6.2 models
    31994 
    31995 > hide #6.2
    31996 
    31997 > ~cartoon #6.2
    31998 
    31999 > color #6.2 white
    32000 
    32001 > color #6.2/a:2552 pale violet red
    32002 
    32003 > color #6.2/a:2553 khaki
    32004 
    32005 > color #6.2/a:2554 green yellow
    32006 
    32007 > color #6.2/a:2555 aquamarine
    32008 
    32009 > color #6.2/a:2556 steel blue
    32010 
    32011 > color #6.2/Y orchid
    32012 
    32013 > color #6.2/a:1955 pale green
    32014 
    32015 > color #6.2/a:2581 teal
    32016 
    32017 > color #6.2/a:2582 royal blue
    32018 
    32019 > color #6.2/a:2583 medium purple
    32020 
    32021 > color #6.2 white target c
    32022 
    32023 > color #6.2/a:2602 cyan
    32024 
    32025 > color #6.2/v:3 magenta
    32026 
    32027 > name to_cartoon #6.2/a:2549-2559
    32028 
    32029 > name to_show #6.2/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32030 
    32031 > cartoon to_cartoon
    32032 
    32033 > show to_show
    32034 
    32035 > hide #6.2/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32036 
    32037 > hbonds to_show restrict to_show color yellow
    32038 
    32039 23 hydrogen bonds found 
    32040 
    32041 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d9_J85_cl2.png height
    32042 > 600 width 1000 supersample 3
    32043 
    32044 > hide #!6.2 models
    32045 
    32046 > show #!6.3 models
    32047 
    32048 > hide #6.3
    32049 
    32050 > ~cartoon #6.3
    32051 
    32052 > color #6.3 white
    32053 
    32054 > color #6.3/a:2552 pale violet red
    32055 
    32056 > color #6.3/a:2553 khaki
    32057 
    32058 > color #6.3/a:2554 green yellow
    32059 
    32060 > color #6.3/a:2555 aquamarine
    32061 
    32062 > color #6.3/a:2556 steel blue
    32063 
    32064 > color #6.3/Y orchid
    32065 
    32066 > color #6.3/a:1955 pale green
    32067 
    32068 > color #6.3/a:2581 teal
    32069 
    32070 > color #6.3/a:2582 royal blue
    32071 
    32072 > color #6.3/a:2583 medium purple
    32073 
    32074 > color #6.3 white target c
    32075 
    32076 > color #6.3/a:2602 cyan
    32077 
    32078 > color #6.3/v:3 magenta
    32079 
    32080 > name to_cartoon #6.3/a:2549-2559
    32081 
    32082 > name to_show #6.3/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32083 
    32084 > cartoon to_cartoon
    32085 
    32086 > show to_show
    32087 
    32088 > hide #6.3/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32089 
    32090 > hbonds to_show restrict to_show color yellow
    32091 
    32092 16 hydrogen bonds found 
    32093 
    32094 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d9_J86_cl3.png height
    32095 > 600 width 1000 supersample 3
    32096 
    32097 > hide #!6.3 models
    32098 
    32099 > show #!6.4 models
    32100 
    32101 > hide #6.4
    32102 
    32103 > ~cartoon #6.4
    32104 
    32105 > color #6.4 white
    32106 
    32107 > color #6.4/a:2552 pale violet red
    32108 
    32109 > color #6.4/a:2553 khaki
    32110 
    32111 > color #6.4/a:2554 green yellow
    32112 
    32113 > color #6.4/a:2555 aquamarine
    32114 
    32115 > color #6.4/a:2556 steel blue
    32116 
    32117 > color #6.4/Y orchid
    32118 
    32119 > color #6.4/a:1955 pale green
    32120 
    32121 > color #6.4/a:2581 teal
    32122 
    32123 > color #6.4/a:2582 royal blue
    32124 
    32125 > color #6.4/a:2583 medium purple
    32126 
    32127 > color #6.4 white target c
    32128 
    32129 > color #6.4/a:2602 cyan
    32130 
    32131 > color #6.4/v:3 magenta
    32132 
    32133 > name to_cartoon #6.4/a:2549-2559
    32134 
    32135 > name to_show #6.4/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32136 
    32137 > cartoon to_cartoon
    32138 
    32139 > show to_show
    32140 
    32141 > hide #6.4/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32142 
    32143 > hbonds to_show restrict to_show color yellow
    32144 
    32145 23 hydrogen bonds found 
    32146 
    32147 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d9_J87_cl4.png height
    32148 > 600 width 1000 supersample 3
    32149 
    32150 > hide #!6.4 models
    32151 
    32152 > show #!6.5 models
    32153 
    32154 > hide #6.5
    32155 
    32156 > ~cartoon #6.5
    32157 
    32158 > color #6.5 white
    32159 
    32160 > color #6.5/a:2552 pale violet red
    32161 
    32162 > color #6.5/a:2553 khaki
    32163 
    32164 > color #6.5/a:2554 green yellow
    32165 
    32166 > color #6.5/a:2555 aquamarine
    32167 
    32168 > color #6.5/a:2556 steel blue
    32169 
    32170 > color #6.5/Y orchid
    32171 
    32172 > color #6.5/a:1955 pale green
    32173 
    32174 > color #6.5/a:2581 teal
    32175 
    32176 > color #6.5/a:2582 royal blue
    32177 
    32178 > color #6.5/a:2583 medium purple
    32179 
    32180 > color #6.5 white target c
    32181 
    32182 > color #6.5/a:2602 cyan
    32183 
    32184 > color #6.5/v:3 magenta
    32185 
    32186 > name to_cartoon #6.5/a:2549-2559
    32187 
    32188 > name to_show #6.5/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32189 
    32190 > cartoon to_cartoon
    32191 
    32192 > show to_show
    32193 
    32194 > hide #6.5/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32195 
    32196 > hbonds to_show restrict to_show color yellow
    32197 
    32198 17 hydrogen bonds found 
    32199 
    32200 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d9_J88_cl5.png height
    32201 > 600 width 1000 supersample 3
    32202 
    32203 > hide #!6.5 models
    32204 
    32205 > show #!6.6 models
    32206 
    32207 > hide #6.6
    32208 
    32209 > ~cartoon #6.6
    32210 
    32211 > color #6.6 white
    32212 
    32213 > color #6.6/a:2552 pale violet red
    32214 
    32215 > color #6.6/a:2553 khaki
    32216 
    32217 > color #6.6/a:2554 green yellow
    32218 
    32219 > color #6.6/a:2555 aquamarine
    32220 
    32221 > color #6.6/a:2556 steel blue
    32222 
    32223 > color #6.6/Y orchid
    32224 
    32225 > color #6.6/a:1955 pale green
    32226 
    32227 > color #6.6/a:2581 teal
    32228 
    32229 > color #6.6/a:2582 royal blue
    32230 
    32231 > color #6.6/a:2583 medium purple
    32232 
    32233 > color #6.6 white target c
    32234 
    32235 > color #6.6/a:2602 cyan
    32236 
    32237 > color #6.6/v:3 magenta
    32238 
    32239 > name to_cartoon #6.6/a:2549-2559
    32240 
    32241 > name to_show #6.6/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32242 
    32243 > cartoon to_cartoon
    32244 
    32245 > show to_show
    32246 
    32247 > hide #6.6/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32248 
    32249 > hbonds to_show restrict to_show color yellow
    32250 
    32251 22 hydrogen bonds found 
    32252 
    32253 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d9_J89_cl6.png height
    32254 > 600 width 1000 supersample 3
    32255 
    32256 > hide #!6.6 models
    32257 
    32258 > show #!6.7 models
    32259 
    32260 > hide #6.7
    32261 
    32262 > ~cartoon #6.7
    32263 
    32264 > color #6.7 white
    32265 
    32266 > color #6.7/a:2552 pale violet red
    32267 
    32268 > color #6.7/a:2553 khaki
    32269 
    32270 > color #6.7/a:2554 green yellow
    32271 
    32272 > color #6.7/a:2555 aquamarine
    32273 
    32274 > color #6.7/a:2556 steel blue
    32275 
    32276 > color #6.7/Y orchid
    32277 
    32278 > color #6.7/a:1955 pale green
    32279 
    32280 > color #6.7/a:2581 teal
    32281 
    32282 > color #6.7/a:2582 royal blue
    32283 
    32284 > color #6.7/a:2583 medium purple
    32285 
    32286 > color #6.7 white target c
    32287 
    32288 > color #6.7/a:2602 cyan
    32289 
    32290 > color #6.7/v:3 magenta
    32291 
    32292 > name to_cartoon #6.7/a:2549-2559
    32293 
    32294 > name to_show #6.7/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32295 
    32296 > cartoon to_cartoon
    32297 
    32298 > show to_show
    32299 
    32300 > hide #6.7/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32301 
    32302 > hbonds to_show restrict to_show color yellow
    32303 
    32304 23 hydrogen bonds found 
    32305 
    32306 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d9_J90_cl7.png height
    32307 > 600 width 1000 supersample 3
    32308 
    32309 > hide #!6.7 models
    32310 
    32311 > show #!6.8 models
    32312 
    32313 > hide #6.8
    32314 
    32315 > ~cartoon #6.8
    32316 
    32317 > color #6.8 white
    32318 
    32319 > color #6.8/a:2552 pale violet red
    32320 
    32321 > color #6.8/a:2553 khaki
    32322 
    32323 > color #6.8/a:2554 green yellow
    32324 
    32325 > color #6.8/a:2555 aquamarine
    32326 
    32327 > color #6.8/a:2556 steel blue
    32328 
    32329 > color #6.8/Y orchid
    32330 
    32331 > color #6.8/a:1955 pale green
    32332 
    32333 > color #6.8/a:2581 teal
    32334 
    32335 > color #6.8/a:2582 royal blue
    32336 
    32337 > color #6.8/a:2583 medium purple
    32338 
    32339 > color #6.8 white target c
    32340 
    32341 > color #6.8/a:2602 cyan
    32342 
    32343 > color #6.8/v:3 magenta
    32344 
    32345 > name to_cartoon #6.8/a:2549-2559
    32346 
    32347 > name to_show #6.8/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32348 
    32349 > cartoon to_cartoon
    32350 
    32351 > show to_show
    32352 
    32353 > hide #6.8/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32354 
    32355 > hbonds to_show restrict to_show color yellow
    32356 
    32357 15 hydrogen bonds found 
    32358 
    32359 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d9_J91_cl8.png height
    32360 > 600 width 1000 supersample 3
    32361 
    32362 > hide #!6.8 models
    32363 
    32364 > show #!6.9 models
    32365 
    32366 > hide #6.9
    32367 
    32368 > ~cartoon #6.9
    32369 
    32370 > color #6.9 white
    32371 
    32372 > color #6.9/a:2552 pale violet red
    32373 
    32374 > color #6.9/a:2553 khaki
    32375 
    32376 > color #6.9/a:2554 green yellow
    32377 
    32378 > color #6.9/a:2555 aquamarine
    32379 
    32380 > color #6.9/a:2556 steel blue
    32381 
    32382 > color #6.9/Y orchid
    32383 
    32384 > color #6.9/a:1955 pale green
    32385 
    32386 > color #6.9/a:2581 teal
    32387 
    32388 > color #6.9/a:2582 royal blue
    32389 
    32390 > color #6.9/a:2583 medium purple
    32391 
    32392 > color #6.9 white target c
    32393 
    32394 > color #6.9/a:2602 cyan
    32395 
    32396 > color #6.9/v:3 magenta
    32397 
    32398 > name to_cartoon #6.9/a:2549-2559
    32399 
    32400 > name to_show #6.9/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32401 
    32402 > cartoon to_cartoon
    32403 
    32404 > show to_show
    32405 
    32406 > hide #6.9/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32407 
    32408 > hbonds to_show restrict to_show color yellow
    32409 
    32410 19 hydrogen bonds found 
    32411 
    32412 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d9_J92_cl9.png height
    32413 > 600 width 1000 supersample 3
    32414 
    32415 > hide #!6.9 models
    32416 
    32417 > show #!14.10 models
    32418 
    32419 > hide #14.10
    32420 
    32421 > ~cartoon #14.10
    32422 
    32423 > color #14.10 white
    32424 
    32425 > color #14.10/a:2552 pale violet red
    32426 
    32427 > color #14.10/a:2553 khaki
    32428 
    32429 > color #14.10/a:2554 green yellow
    32430 
    32431 > color #14.10/a:2555 aquamarine
    32432 
    32433 > color #14.10/a:2556 steel blue
    32434 
    32435 > color #14.10/Y orchid
    32436 
    32437 > color #14.10/a:1955 pale green
    32438 
    32439 > color #14.10/a:2581 teal
    32440 
    32441 > color #14.10/a:2582 royal blue
    32442 
    32443 > color #14.10/a:2583 medium purple
    32444 
    32445 > color #14.10 white target c
    32446 
    32447 > color #14.10/a:2602 cyan
    32448 
    32449 > color #14.10/v:3 magenta
    32450 
    32451 > name to_cartoon #14.10/a:2549-2559
    32452 
    32453 > name to_show #14.10/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32454 
    32455 > cartoon to_cartoon
    32456 
    32457 > show to_show
    32458 
    32459 > hide #14.10/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32460 
    32461 > hbonds to_show restrict to_show color yellow
    32462 
    32463 17 hydrogen bonds found 
    32464 
    32465 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d10_J53_c0.png height
    32466 > 600 width 1000 supersample 3
    32467 
    32468 > hide #!14.10 models
    32469 
    32470 > show #!14.1 models
    32471 
    32472 > hide #14.1
    32473 
    32474 > ~cartoon #14.1
    32475 
    32476 > color #14.1 white
    32477 
    32478 > color #14.1/a:2552 pale violet red
    32479 
    32480 > color #14.1/a:2553 khaki
    32481 
    32482 > color #14.1/a:2554 green yellow
    32483 
    32484 > color #14.1/a:2555 aquamarine
    32485 
    32486 > color #14.1/a:2556 steel blue
    32487 
    32488 > color #14.1/Y orchid
    32489 
    32490 > color #14.1/a:1955 pale green
    32491 
    32492 > color #14.1/a:2581 teal
    32493 
    32494 > color #14.1/a:2582 royal blue
    32495 
    32496 > color #14.1/a:2583 medium purple
    32497 
    32498 > color #14.1 white target c
    32499 
    32500 > color #14.1/a:2602 cyan
    32501 
    32502 > color #14.1/v:3 magenta
    32503 
    32504 > name to_cartoon #14.1/a:2549-2559
    32505 
    32506 > name to_show #14.1/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32507 
    32508 > cartoon to_cartoon
    32509 
    32510 > show to_show
    32511 
    32512 > hide #14.1/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32513 
    32514 > hbonds to_show restrict to_show color yellow
    32515 
    32516 18 hydrogen bonds found 
    32517 
    32518 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d10_J54_c1.png height
    32519 > 600 width 1000 supersample 3
    32520 
    32521 > hide #!14.1 models
    32522 
    32523 > show #!14.2 models
    32524 
    32525 > hide #14.2
    32526 
    32527 > ~cartoon #14.2
    32528 
    32529 > color #14.2 white
    32530 
    32531 > color #14.2/a:2552 pale violet red
    32532 
    32533 > color #14.2/a:2553 khaki
    32534 
    32535 > color #14.2/a:2554 green yellow
    32536 
    32537 > color #14.2/a:2555 aquamarine
    32538 
    32539 > color #14.2/a:2556 steel blue
    32540 
    32541 > color #14.2/Y orchid
    32542 
    32543 > color #14.2/a:1955 pale green
    32544 
    32545 > color #14.2/a:2581 teal
    32546 
    32547 > color #14.2/a:2582 royal blue
    32548 
    32549 > color #14.2/a:2583 medium purple
    32550 
    32551 > color #14.2 white target c
    32552 
    32553 > color #14.2/a:2602 cyan
    32554 
    32555 > color #14.2/v:3 magenta
    32556 
    32557 > name to_cartoon #14.2/a:2549-2559
    32558 
    32559 > name to_show #14.2/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32560 
    32561 > cartoon to_cartoon
    32562 
    32563 > show to_show
    32564 
    32565 > hide #14.2/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32566 
    32567 > hbonds to_show restrict to_show color yellow
    32568 
    32569 18 hydrogen bonds found 
    32570 
    32571 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d10_J55_c2.png height
    32572 > 600 width 1000 supersample 3
    32573 
    32574 > hide #!14.2 models
    32575 
    32576 > show #!14.3 models
    32577 
    32578 > hide #14.3
    32579 
    32580 > ~cartoon #14.3
    32581 
    32582 > color #14.3 white
    32583 
    32584 > color #14.3/a:2552 pale violet red
    32585 
    32586 > color #14.3/a:2553 khaki
    32587 
    32588 > color #14.3/a:2554 green yellow
    32589 
    32590 > color #14.3/a:2555 aquamarine
    32591 
    32592 > color #14.3/a:2556 steel blue
    32593 
    32594 > color #14.3/Y orchid
    32595 
    32596 > color #14.3/a:1955 pale green
    32597 
    32598 > color #14.3/a:2581 teal
    32599 
    32600 > color #14.3/a:2582 royal blue
    32601 
    32602 > color #14.3/a:2583 medium purple
    32603 
    32604 > color #14.3 white target c
    32605 
    32606 > color #14.3/a:2602 cyan
    32607 
    32608 > color #14.3/v:3 magenta
    32609 
    32610 > name to_cartoon #14.3/a:2549-2559
    32611 
    32612 > name to_show #14.3/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32613 
    32614 > cartoon to_cartoon
    32615 
    32616 > show to_show
    32617 
    32618 > hide #14.3/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32619 
    32620 > hbonds to_show restrict to_show color yellow
    32621 
    32622 27 hydrogen bonds found 
    32623 
    32624 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d10_J56_c3.png height
    32625 > 600 width 1000 supersample 3
    32626 
    32627 > hide #!14.3 models
    32628 
    32629 > show #!14.4 models
    32630 
    32631 > hide #14.4
    32632 
    32633 > ~cartoon #14.4
    32634 
    32635 > color #14.4 white
    32636 
    32637 > color #14.4/a:2552 pale violet red
    32638 
    32639 > color #14.4/a:2553 khaki
    32640 
    32641 > color #14.4/a:2554 green yellow
    32642 
    32643 > color #14.4/a:2555 aquamarine
    32644 
    32645 > color #14.4/a:2556 steel blue
    32646 
    32647 > color #14.4/Y orchid
    32648 
    32649 > color #14.4/a:1955 pale green
    32650 
    32651 > color #14.4/a:2581 teal
    32652 
    32653 > color #14.4/a:2582 royal blue
    32654 
    32655 > color #14.4/a:2583 medium purple
    32656 
    32657 > color #14.4 white target c
    32658 
    32659 > color #14.4/a:2602 cyan
    32660 
    32661 > color #14.4/v:3 magenta
    32662 
    32663 > name to_cartoon #14.4/a:2549-2559
    32664 
    32665 > name to_show #14.4/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32666 
    32667 > cartoon to_cartoon
    32668 
    32669 > show to_show
    32670 
    32671 > hide #14.4/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32672 
    32673 > hbonds to_show restrict to_show color yellow
    32674 
    32675 17 hydrogen bonds found 
    32676 
    32677 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d10_J57_c4.png height
    32678 > 600 width 1000 supersample 3
    32679 
    32680 > hide #!14.4 models
    32681 
    32682 > show #!14.5 models
    32683 
    32684 > hide #14.5
    32685 
    32686 > ~cartoon #14.5
    32687 
    32688 > color #14.5 white
    32689 
    32690 > color #14.5/a:2552 pale violet red
    32691 
    32692 > color #14.5/a:2553 khaki
    32693 
    32694 > color #14.5/a:2554 green yellow
    32695 
    32696 > color #14.5/a:2555 aquamarine
    32697 
    32698 > color #14.5/a:2556 steel blue
    32699 
    32700 > color #14.5/Y orchid
    32701 
    32702 > color #14.5/a:1955 pale green
    32703 
    32704 > color #14.5/a:2581 teal
    32705 
    32706 > color #14.5/a:2582 royal blue
    32707 
    32708 > color #14.5/a:2583 medium purple
    32709 
    32710 > color #14.5 white target c
    32711 
    32712 > color #14.5/a:2602 cyan
    32713 
    32714 > color #14.5/v:3 magenta
    32715 
    32716 > name to_cartoon #14.5/a:2549-2559
    32717 
    32718 > name to_show #14.5/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32719 
    32720 > cartoon to_cartoon
    32721 
    32722 > show to_show
    32723 
    32724 > hide #14.5/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32725 
    32726 > hbonds to_show restrict to_show color yellow
    32727 
    32728 17 hydrogen bonds found 
    32729 
    32730 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d10_J58_c5.png height
    32731 > 600 width 1000 supersample 3
    32732 
    32733 > hide #!14.5 models
    32734 
    32735 > show #!14.6 models
    32736 
    32737 > hide #14.6
    32738 
    32739 > ~cartoon #14.6
    32740 
    32741 > color #14.6 white
    32742 
    32743 > color #14.6/a:2552 pale violet red
    32744 
    32745 > color #14.6/a:2553 khaki
    32746 
    32747 > color #14.6/a:2554 green yellow
    32748 
    32749 > color #14.6/a:2555 aquamarine
    32750 
    32751 > color #14.6/a:2556 steel blue
    32752 
    32753 > color #14.6/Y orchid
    32754 
    32755 > color #14.6/a:1955 pale green
    32756 
    32757 > color #14.6/a:2581 teal
    32758 
    32759 > color #14.6/a:2582 royal blue
    32760 
    32761 > color #14.6/a:2583 medium purple
    32762 
    32763 > color #14.6 white target c
    32764 
    32765 > color #14.6/a:2602 cyan
    32766 
    32767 > color #14.6/v:3 magenta
    32768 
    32769 > name to_cartoon #14.6/a:2549-2559
    32770 
    32771 > name to_show #14.6/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32772 
    32773 > cartoon to_cartoon
    32774 
    32775 > show to_show
    32776 
    32777 > hide #14.6/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32778 
    32779 > hbonds to_show restrict to_show color yellow
    32780 
    32781 21 hydrogen bonds found 
    32782 
    32783 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d10_J59_c6.png height
    32784 > 600 width 1000 supersample 3
    32785 
    32786 > hide #!14.6 models
    32787 
    32788 > show #!14.7 models
    32789 
    32790 > hide #14.7
    32791 
    32792 > ~cartoon #14.7
    32793 
    32794 > color #14.7 white
    32795 
    32796 > color #14.7/a:2552 pale violet red
    32797 
    32798 > color #14.7/a:2553 khaki
    32799 
    32800 > color #14.7/a:2554 green yellow
    32801 
    32802 > color #14.7/a:2555 aquamarine
    32803 
    32804 > color #14.7/a:2556 steel blue
    32805 
    32806 > color #14.7/Y orchid
    32807 
    32808 > color #14.7/a:1955 pale green
    32809 
    32810 > color #14.7/a:2581 teal
    32811 
    32812 > color #14.7/a:2582 royal blue
    32813 
    32814 > color #14.7/a:2583 medium purple
    32815 
    32816 > color #14.7 white target c
    32817 
    32818 > color #14.7/a:2602 cyan
    32819 
    32820 > color #14.7/v:3 magenta
    32821 
    32822 > name to_cartoon #14.7/a:2549-2559
    32823 
    32824 > name to_show #14.7/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32825 
    32826 > cartoon to_cartoon
    32827 
    32828 > show to_show
    32829 
    32830 > hide #14.7/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32831 
    32832 > hbonds to_show restrict to_show color yellow
    32833 
    32834 22 hydrogen bonds found 
    32835 
    32836 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d10_J60_c7.png height
    32837 > 600 width 1000 supersample 3
    32838 
    32839 > hide #!14.7 models
    32840 
    32841 > show #!14.8 models
    32842 
    32843 > hide #14.8
    32844 
    32845 > ~cartoon #14.8
    32846 
    32847 > color #14.8 white
    32848 
    32849 > color #14.8/a:2552 pale violet red
    32850 
    32851 > color #14.8/a:2553 khaki
    32852 
    32853 > color #14.8/a:2554 green yellow
    32854 
    32855 > color #14.8/a:2555 aquamarine
    32856 
    32857 > color #14.8/a:2556 steel blue
    32858 
    32859 > color #14.8/Y orchid
    32860 
    32861 > color #14.8/a:1955 pale green
    32862 
    32863 > color #14.8/a:2581 teal
    32864 
    32865 > color #14.8/a:2582 royal blue
    32866 
    32867 > color #14.8/a:2583 medium purple
    32868 
    32869 > color #14.8 white target c
    32870 
    32871 > color #14.8/a:2602 cyan
    32872 
    32873 > color #14.8/v:3 magenta
    32874 
    32875 > name to_cartoon #14.8/a:2549-2559
    32876 
    32877 > name to_show #14.8/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32878 
    32879 > cartoon to_cartoon
    32880 
    32881 > show to_show
    32882 
    32883 > hide #14.8/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32884 
    32885 > hbonds to_show restrict to_show color yellow
    32886 
    32887 21 hydrogen bonds found 
    32888 
    32889 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d10_J61_c8.png height
    32890 > 600 width 1000 supersample 3
    32891 
    32892 > hide #!14.8 models
    32893 
    32894 > show #!14.9 models
    32895 
    32896 > hide #14.9
    32897 
    32898 > ~cartoon #14.9
    32899 
    32900 > color #14.9 white
    32901 
    32902 > color #14.9/a:2552 pale violet red
    32903 
    32904 > color #14.9/a:2553 khaki
    32905 
    32906 > color #14.9/a:2554 green yellow
    32907 
    32908 > color #14.9/a:2555 aquamarine
    32909 
    32910 > color #14.9/a:2556 steel blue
    32911 
    32912 > color #14.9/Y orchid
    32913 
    32914 > color #14.9/a:1955 pale green
    32915 
    32916 > color #14.9/a:2581 teal
    32917 
    32918 > color #14.9/a:2582 royal blue
    32919 
    32920 > color #14.9/a:2583 medium purple
    32921 
    32922 > color #14.9 white target c
    32923 
    32924 > color #14.9/a:2602 cyan
    32925 
    32926 > color #14.9/v:3 magenta
    32927 
    32928 > name to_cartoon #14.9/a:2549-2559
    32929 
    32930 > name to_show #14.9/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32931 
    32932 > cartoon to_cartoon
    32933 
    32934 > show to_show
    32935 
    32936 > hide #14.9/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32937 
    32938 > hbonds to_show restrict to_show color yellow
    32939 
    32940 30 hydrogen bonds found 
    32941 
    32942 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_d10_J62_c9.png height
    32943 > 600 width 1000 supersample 3
    32944 
    32945 > hide #!14.9 models
    32946 
    32947 > show #!22.1 models
    32948 
    32949 > hide #22.1
    32950 
    32951 > ~cartoon #22.1
    32952 
    32953 > color #22.1 white
    32954 
    32955 > color #22.1/a:2552 pale violet red
    32956 
    32957 > color #22.1/a:2553 khaki
    32958 
    32959 > color #22.1/a:2554 green yellow
    32960 
    32961 > color #22.1/a:2555 aquamarine
    32962 
    32963 > color #22.1/a:2556 steel blue
    32964 
    32965 > color #22.1/Y orchid
    32966 
    32967 > color #22.1/a:1955 pale green
    32968 
    32969 > color #22.1/a:2581 teal
    32970 
    32971 > color #22.1/a:2582 royal blue
    32972 
    32973 > color #22.1/a:2583 medium purple
    32974 
    32975 > color #22.1 white target c
    32976 
    32977 > color #22.1/a:2602 cyan
    32978 
    32979 > color #22.1/v:3 magenta
    32980 
    32981 > name to_cartoon #22.1/a:2549-2559
    32982 
    32983 > name to_show #22.1/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    32984 
    32985 > cartoon to_cartoon
    32986 
    32987 > show to_show
    32988 
    32989 > hide #22.1/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    32990 
    32991 > hbonds to_show restrict to_show color yellow
    32992 
    32993 24 hydrogen bonds found 
    32994 
    32995 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_dE_J111_ape.png
    32996 > height 600 width 1000 supersample 3
    32997 
    32998 > hide #!22.1 models
    32999 
    33000 > show #!22.2 models
    33001 
    33002 > hide #22.2
    33003 
    33004 > ~cartoon #22.2
    33005 
    33006 > color #22.2 white
    33007 
    33008 > color #22.2/a:2552 pale violet red
    33009 
    33010 > color #22.2/a:2553 khaki
    33011 
    33012 > color #22.2/a:2554 green yellow
    33013 
    33014 > color #22.2/a:2555 aquamarine
    33015 
    33016 > color #22.2/a:2556 steel blue
    33017 
    33018 > color #22.2/Y orchid
    33019 
    33020 > color #22.2/a:1955 pale green
    33021 
    33022 > color #22.2/a:2581 teal
    33023 
    33024 > color #22.2/a:2582 royal blue
    33025 
    33026 > color #22.2/a:2583 medium purple
    33027 
    33028 > color #22.2 white target c
    33029 
    33030 > color #22.2/a:2602 cyan
    33031 
    33032 > color #22.2/v:3 magenta
    33033 
    33034 > name to_cartoon #22.2/a:2549-2559
    33035 
    33036 > name to_show #22.2/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    33037 
    33038 > cartoon to_cartoon
    33039 
    33040 > show to_show
    33041 
    33042 > hide #22.2/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    33043 
    33044 > hbonds to_show restrict to_show color yellow
    33045 
    33046 25 hydrogen bonds found 
    33047 
    33048 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_dE_J112_ap.png height
    33049 > 600 width 1000 supersample 3
    33050 
    33051 > hide #!22.2 models
    33052 
    33053 > show #!22.3 models
    33054 
    33055 > hide #22.3
    33056 
    33057 > ~cartoon #22.3
    33058 
    33059 > color #22.3 white
    33060 
    33061 > color #22.3/a:2552 pale violet red
    33062 
    33063 > color #22.3/a:2553 khaki
    33064 
    33065 > color #22.3/a:2554 green yellow
    33066 
    33067 > color #22.3/a:2555 aquamarine
    33068 
    33069 > color #22.3/a:2556 steel blue
    33070 
    33071 > color #22.3/Y orchid
    33072 
    33073 > color #22.3/a:1955 pale green
    33074 
    33075 > color #22.3/a:2581 teal
    33076 
    33077 > color #22.3/a:2582 royal blue
    33078 
    33079 > color #22.3/a:2583 medium purple
    33080 
    33081 > color #22.3 white target c
    33082 
    33083 > color #22.3/a:2602 cyan
    33084 
    33085 > color #22.3/v:3 magenta
    33086 
    33087 > name to_cartoon #22.3/a:2549-2559
    33088 
    33089 > name to_show #22.3/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    33090 
    33091 > cartoon to_cartoon
    33092 
    33093 > show to_show
    33094 
    33095 > hide #22.3/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    33096 
    33097 > hbonds to_show restrict to_show color yellow
    33098 
    33099 16 hydrogen bonds found 
    33100 
    33101 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_dE_J113_pe.png height
    33102 > 600 width 1000 supersample 3
    33103 
    33104 > hide #!22.3 models
    33105 
    33106 > show #!22.4 models
    33107 
    33108 > hide #22.4
    33109 
    33110 > ~cartoon #22.4
    33111 
    33112 > color #22.4 white
    33113 
    33114 > color #22.4/a:2552 pale violet red
    33115 
    33116 > color #22.4/a:2553 khaki
    33117 
    33118 > color #22.4/a:2554 green yellow
    33119 
    33120 > color #22.4/a:2555 aquamarine
    33121 
    33122 > color #22.4/a:2556 steel blue
    33123 
    33124 > color #22.4/Y orchid
    33125 
    33126 > color #22.4/a:1955 pale green
    33127 
    33128 > color #22.4/a:2581 teal
    33129 
    33130 > color #22.4/a:2582 royal blue
    33131 
    33132 > color #22.4/a:2583 medium purple
    33133 
    33134 > color #22.4 white target c
    33135 
    33136 > color #22.4/a:2602 cyan
    33137 
    33138 > color #22.4/v:3 magenta
    33139 
    33140 > name to_cartoon #22.4/a:2549-2559
    33141 
    33142 > name to_show #22.4/a:1955,2549-2559,2581-2584,2602/Y:73-76/v:2-5
    33143 
    33144 > cartoon to_cartoon
    33145 
    33146 > show to_show
    33147 
    33148 > hide #22.4/a:1955,2602@P,OP1,OP2,C5',O5',C4',O4',O3',C3',C2',O2'
    33149 
    33150 > hbonds to_show restrict to_show color yellow
    33151 
    33152 18 hydrogen bonds found 
    33153 
    33154 > save /Users/dalar193/Desktop/A_loop_A2602/A_loop_A2602_dE_J124_e.png height
    33155 > 600 width 1000 supersample 3
    33156 
    33157 > hide #!22.4 models
    33158 
    33159 > graphics quality 1
    33160 
    33161 > show #!14.9 models
    33162 
    33163 > show #!14.8 models
    33164 
    33165 > hide #!14.9 models
    33166 
    33167 > show #!14.7 models
    33168 
    33169 > hide #!14.8 models
    33170 
    33171 > hide #!14.7 models
    33172 
    33173 > show #!14.6 models
    33174 
    33175 > hide #!14.6 models
    33176 
    33177 > show #!14.5 models
    33178 
    33179 > show #!14.4 models
    33180 
    33181 > hide #!14.5 models
    33182 
    33183 > show #!14.3 models
    33184 
    33185 > hide #!14.4 models
    33186 
    33187 > show #!14.2 models
    33188 
    33189 > hide #!14.3 models
    33190 
    33191 > show #!14.1 models
    33192 
    33193 > hide #!14.2 models
    33194 
    33195 > show #!14.2 models
    33196 
    33197 > hide #!14.1 models
    33198 
    33199 > hide #!14.2 models
    33200 
    33201 > show #!14.10 models
    33202 
    33203 > show #!14.9 models
    33204 
    33205 > hide #!14.10 models
    33206 
    33207 > hide #!14.9 models
    33208 
    33209 > show #!14.10 models
    33210 
    33211 > show #!12.10 models
    33212 
    33213 > hide #!12.10 models
    33214 
    33215 > show #!13.10 models
    33216 
    33217 > hide #!13.10 models
    33218 
    33219 > show #!13.10 models
    33220 
    33221 > hide #!13.10 models
    33222 
    33223 > show #!13.9 models
    33224 
    33225 > hide #!14.10 models
    33226 
    33227 > show #!14.9 models
    33228 
    33229 > graphics silhouettes false
    33230 
    33231 > show #14.9/a
    33232 
    33233 > hide #!13.9 models
    33234 
    33235 > show #!12.9 models
    33236 
    33237 > show #!1.2 models
    33238 
    33239 > hide #!1.2 models
    33240 
    33241 > show #!1.2 models
    33242 
    33243 > hide #!14.9 models
    33244 
    33245 > hide #!12.9 models
    33246 
    33247 > show #!1.1 models
    33248 
    33249 > show #1.2/a
    33250 
    33251 > hide #!1.1 models
    33252 
    33253 > show #!14.9 models
    33254 
    33255 > hide #!1.2 models
    33256 
    33257 > open
    33258 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delE50S_homogen_J36_0.70469Apix.mrc
    33259 
    33260 Opened delE50S_homogen_J36_0.70469Apix.mrc as #7, grid size 391,421,391, pixel
    33261 0.705,0.705,0.705, shown at level 0.601, step 2, values float32 
    33262 
    33263 > open
    33264 > /Users/dalar193/wd/deltaRibosomes/aligned_maps/delE50S_homogen_J36_0.70469Apix.mrc
    33265 
    33266 Opened delE50S_homogen_J36_0.70469Apix.mrc as #8, grid size 391,421,391, pixel
    33267 0.705,0.705,0.705, shown at level 0.601, step 2, values float32 
    33268 
    33269 > close #8
    33270 
    33271 > hide #!7.1 models
    33272 
    33273 > show #7.1 models
    33274 
    33275 > hide #!7.1 models
    33276 
    33277 > show #7.1 models
    33278 
    33279 > hide #!7.1 models
    33280 
    33281 > show #7.1 models
    33282 
    33283 > volume #7 style mesh
    33284 
    33285 > volume #7 step 1
    33286 
    33287 > hide #!22 models
    33288 
    33289 > hide #!21 models
    33290 
    33291 > show #!21 models
    33292 
    33293 > show #!20.1 models
    33294 
    33295 > hide #!20.1 models
    33296 
    33297 > show #!20.1 models
    33298 
    33299 > hide #!20.1 models
    33300 
    33301 > show #!22.1 models
    33302 
    33303 > hide #!22.1 models
    33304 
    33305 > show #!22.1 models
    33306 
    33307 > hide #!14.9 models
    33308 
    33309 > show #!1.2 models
    33310 
    33311 > hide #!1.2 models
    33312 
    33313 > show #!14.1 models
    33314 
    33315 > hide #!22.1 models
    33316 
    33317 > show #!22.1 models
    33318 
    33319 > hide #!22.1 models
    33320 
    33321 > show #!22.1 models
    33322 
    33323 > hide #!22.1 models
    33324 
    33325 > hide #!14.1 models
    33326 
    33327 > show #!1.2 models
    33328 
    33329 > hide #!1.2 models
    33330 
    33331 > show #!1.2 models
    33332 
    33333 > hide #!1.2 models
    33334 
    33335 > show #!1.8 models
    33336 
    33337 > hide #7.1 models
    33338 
    33339 > show #7.1 models
    33340 
    33341 > hide #!7 models
    33342 
    33343 > show #!22.1 models
    33344 
    33345 > hide #!22.1 models
    33346 
    33347 > show #!14.1 models
    33348 
    33349 > hide #!14.1 models
    33350 
    33351 > show #!14.2 models
    33352 
    33353 > show #!1.9 models
    33354 
    33355 > hide #!1.9 models
    33356 
    33357 > show #!1.9 models
    33358 
    33359 > hide #!1.9 models
    33360 
    33361 > show #!1.9 models
    33362 
    33363 > hide #!1.9 models
    33364 
    33365 > show #!1.9 models
    33366 
    33367 > hide #!1.9 models
    33368 
    33369 > hide #!14.2 models
    33370 
    33371 > show #!1.9 models
    33372 
    33373 > volume #1.8 level 0.08465
    33374 
    33375 > show #!14.1 models
    33376 
    33377 > hide #!14.1 models
    33378 
    33379 > show #!14.1 models
    33380 
    33381 > hide #!14.1 models
    33382 
    33383 > show #!14.2 models
    33384 
    33385 > hide #!14.2 models
    33386 
    33387 > show #!14.2 models
    33388 
    33389 > hide #!14.2 models
    33390 
    33391 > show #!14.2 models
    33392 
    33393 > hide #!14.2 models
    33394 
    33395 > show #!14.2 models
    33396 
    33397 > hide #!14.2 models
    33398 
    33399 > show #!14.3 models
    33400 
    33401 > hide #!14.3 models
    33402 
    33403 > show #!14.3 models
    33404 
    33405 > hide #!14.3 models
    33406 
    33407 > show #!14.3 models
    33408 
    33409 > hide #!14.3 models
    33410 
    33411 > show #!14.3 models
    33412 
    33413 > hide #!14.3 models
    33414 
    33415 > show #!14.3 models
    33416 
    33417 > hide #!1.9 models
    33418 
    33419 > show #!14.2 models
    33420 
    33421 > hide #!14.3 models
    33422 
    33423 > hide #!14.2 models
    33424 
    33425 > show #!14.2 models
    33426 
    33427 > show #!14.3 models
    33428 
    33429 > show #!1.9 models
    33430 
    33431 > hide #!1.9 models
    33432 
    33433 > show #!1.9 models
    33434 
    33435 > hide #!14.3 models
    33436 
    33437 > hide #!14.2 models
    33438 
    33439 > hide #!22 models
    33440 
    33441 > show #!22 models
    33442 
    33443 > show #!22.1 models
    33444 
    33445 > hide #!22.1 models
    33446 
    33447 > show #!22.1 models
    33448 
    33449 > hide #!22.1 models
    33450 
    33451 > show #!22.3 models
    33452 
    33453 > hide #!1.9 models
    33454 
    33455 > hide #!1.8 models
    33456 
    33457 > show #!22.2 models
    33458 
    33459 > hide #!22.2 models
    33460 
    33461 > show #!22.2 models
    33462 
    33463 > hide #!22.2 models
    33464 
    33465 > show #!22.1 models
    33466 
    33467 > hide #!22.1 models
    33468 
    33469 > show #!22.1 models
    33470 
    33471 > hide #!22.1 models
    33472 
    33473 > show #!22.4 models
    33474 
    33475 > hide #!22.4 models
    33476 
    33477 > show #!7 models
    33478 
    33479 > volume #7 level 0.4061
    33480 
    33481 > volume #7 level 0.3088
    33482 
    33483 > show #!1.2 models
    33484 
    33485 > hide #!1.2 models
    33486 
    33487 > show #!1.2 models
    33488 
    33489 > hide #!1.2 models
    33490 
    33491 > show #!1.2 models
    33492 
    33493 > hide #!1.2 models
    33494 
    33495 > show #!1.2 models
    33496 
    33497 > hide #!1.2 models
    33498 
    33499 > hide #!22.3 models
    33500 
    33501 > show #!22.1 models
    33502 
    33503 > show #!22.2 models
    33504 
    33505 > hide #!22.2 models
    33506 
    33507 > hide #!22.1 models
    33508 
    33509 > show #!22.1 models
    33510 
    33511 > show #!6.1 models
    33512 
    33513 > hide #!22.1 models
    33514 
    33515 > hide #!7 models
    33516 
    33517 > show #!20.1 models
    33518 
    33519 > show #!20.2 models
    33520 
    33521 > hide #!20.1 models
    33522 
    33523 > volume #20.2 level 0.15
    33524 
    33525 > volume #20.2 level 0.22
    33526 
    33527 > volume style mesh
    33528 
    33529 > nucleotides atoms
    33530 
    33531 > windowsize 600 600
    33532 
    33533 > hide #!20.2 models
    33534 
    33535 > hide #!6.1 models
    33536 
    33537 > show #!1.2 models
    33538 
    33539 > save /Users/dalar193/wd/deltaRibosomes/figure_with_maps.cxs includeMaps true
    33540 
    33541 ——— End of log from Fri Apr 19 16:41:09 2024 ———
    33542 
    33543 opened ChimeraX session 
    33544 
    33545 > hide #!1.2 models
    33546 
    33547 > show #!4.6 models
    33548 
    33549 > show #!7 models
    33550 
    33551 > hide #!7 models
    33552 
    33553 > close #7
    33554 
    33555 > show #!6.6 models
    33556 
    33557 > show #6.*
    33558 
    33559 > color #6.*/Z purple
    33560 
    33561 > hide #!6.6 models
    33562 
    33563 > show #!6.4 models
    33564 
    33565 > show #!4.4 models
    33566 
    33567 > hide #!4.6 models
    33568 
    33569 > show #!6.5 models
    33570 
    33571 > hide #!6.4 models
    33572 
    33573 > show #!4.5 models
    33574 
    33575 > hide #!4.4 models
    33576 
    33577 > show #!4.4 models
    33578 
    33579 > hide #!4.5 models
    33580 
    33581 > show #!4.5 models
    33582 
    33583 > hide #!4.4 models
    33584 
    33585 > show #!4.4 models
    33586 
    33587 > hide #!4.5 models
    33588 
    33589 > show #!6.4 models
    33590 
    33591 > hide #!6.5 models
    33592 
    33593 > show #!4.5 models
    33594 
    33595 > hide #!4.4 models
    33596 
    33597 > show #!4.4 models
    33598 
    33599 > hide #!4.5 models
    33600 
    33601 > show #!6.5 models
    33602 
    33603 > hide #!6.5 models
    33604 
    33605 > show #!6.5 models
    33606 
    33607 > hide #!4.4 models
    33608 
    33609 > show #!4.5 models
    33610 
    33611 > hide #!6.4 models
    33612 
    33613 > hide #!4.5 models
    33614 
    33615 > show #!4.10 models
    33616 
    33617 > show #!6.10 models
    33618 
    33619 > hide #!6.5 models
    33620 
    33621 > hide #!6.10 models
    33622 
    33623 > show #!6.6 models
    33624 
    33625 > hide #!4.10 models
    33626 
    33627 > show #!4.6 models
    33628 
    33629 > volume #4.6 level 0.4
    33630 
    33631 > volume #4.6 level 0.3
    33632 
    33633 > hide #!4.6 models
    33634 
    33635 > show #!4.4 models
    33636 
    33637 > show #!6.4 models
    33638 
    33639 > hide #!6.6 models
    33640 
    33641 > open
    33642 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J87-coot-9.pdb
    33643 
    33644 Summary of feedback from opening
    33645 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J87-coot-9.pdb 
    33646 --- 
    33647 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    33648 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    33649 6 
    33650 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    33651 8 
    33652 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    33653 23 
    33654 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    33655 13 
    33656 320 messages similar to the above omitted 
    33657 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    33658 -1 N LEU l 102 O LEU l 33 
    33659 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    33660 0 
    33661 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    33662 -1 N LYS l 133 O SER l 30 
    33663 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    33664 0 
    33665 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    33666 115 -1 N ILE m 113 O ILE m 34 
    33667 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    33668 103 -1 N CYS m 100 O MET m 110 
    33669 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    33670 0 
    33671 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    33672 -1 N VAL n 39 O VAL n 49 
    33673 55 messages similar to the above omitted 
    33674 Cannot find LINK/SSBOND residue ZN (101 ) 
    33675 Cannot find LINK/SSBOND residue ZN (101 ) 
    33676 Cannot find LINK/SSBOND residue ZN (101 ) 
    33677 Cannot find LINK/SSBOND residue ZN (101 ) 
    33678  
    33679 Chain information for d9J87-coot-9.pdb #7 
    33680 --- 
    33681 Chain | Description 
    33682 3 | No description available 
    33683 Y | No description available 
    33684 Z | No description available 
    33685 a | No description available 
    33686 b | No description available 
    33687 c | No description available 
    33688 e | No description available 
    33689 l | No description available 
    33690  
    33691 
    33692 > style #!7#!6.4 stick
    33693 
    33694 Changed 20514 atom styles 
    33695 
    33696 > hide #!6.4 models
    33697 
    33698 > show #!6.4 models
    33699 
    33700 > hide #!6.4 models
    33701 
    33702 > open
    33703 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_NU_J87_PTCclass4_0.7Apix.mrc
    33704 
    33705 Opened delta9_NU_J87_PTCclass4_0.7Apix.mrc as #8, grid size 391,421,391, pixel
    33706 0.7,0.7,0.7, shown at level 0.888, step 2, values float32 
    33707 
    33708 > hide #!4.4 models
    33709 
    33710 > hide #!7 models
    33711 
    33712 > show #!7 models
    33713 
    33714 > volume #8 style mesh
    33715 
    33716 > volume #8 step 1
    33717 
    33718 > volume #8 level 0.5
    33719 
    33720 > volume #8 level 0.4
    33721 
    33722 > close session
    33723 
    33724 > open
    33725 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/EMD28254_8emm.mrc
    33726 > id 1.1 name 8emm_map
    33727 
    33728 Opened 8emm_map as #1, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    33729 level 0.0248, step 2, values float32 
    33730 
    33731 > open
    33732 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/8emm_LSQ-23S.pdb id
    33733 > 1.2 name 8emm
    33734 
    33735 Summary of feedback from opening
    33736 /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/8emm_LSQ-23S.pdb 
    33737 --- 
    33738 warnings | PDB SEQRES record for chain B is incomplete. Ignoring input sequence records as basis for sequence. 
    33739 PDB SEQRES record for chain Y is incomplete. Ignoring input sequence records
    33740 as basis for sequence. 
    33741 PDB SEQRES record for chain Z is incomplete. Ignoring input sequence records
    33742 as basis for sequence. 
    33743  
    33744 Chain information for 8emm #2 
    33745 --- 
    33746 Chain | Description 
    33747 0 | No description available 
    33748 1 | No description available 
    33749 2 | No description available 
    33750 3 | No description available 
    33751 4 | No description available 
    33752 A | No description available 
    33753 B | No description available 
    33754 C | No description available 
    33755 D | No description available 
    33756 E | No description available 
    33757 F | No description available 
    33758 G | No description available 
    33759 H | No description available 
    33760 I | No description available 
    33761 J | No description available 
    33762 K | No description available 
    33763 L | No description available 
    33764 M | No description available 
    33765 N | No description available 
    33766 O | No description available 
    33767 P | No description available 
    33768 Q | No description available 
    33769 R | No description available 
    33770 S | No description available 
    33771 T | No description available 
    33772 U | No description available 
    33773 X | No description available 
    33774 Y Z | No description available 
    33775 a | No description available 
    33776 b | No description available 
    33777 c | No description available 
    33778 d | No description available 
    33779 e | No description available 
    33780 f | No description available 
    33781 g | No description available 
    33782 h | No description available 
    33783 i | No description available 
    33784 j | No description available 
    33785 k | No description available 
    33786 l | No description available 
    33787 m | No description available 
    33788 n | No description available 
    33789 o | No description available 
    33790 p | No description available 
    33791 q | No description available 
    33792 r | No description available 
    33793 s | No description available 
    33794 t | No description available 
    33795 u | No description available 
    33796 v | No description available 
    33797 w | No description available 
    33798 x | No description available 
    33799 y | No description available 
    33800 z | No description available 
    33801  
    33802 
    33803 > open
    33804 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/EMD15793_8b0x_x0.9933446.mrc
    33805 > id 1.3 name 8b0x_map
    33806 
    33807 Opened 8b0x_map as #2, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    33808 level 0.608, step 2, values float32 
    33809 
    33810 > open
    33811 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/8b0x_x0.9933445912387006_LSQ-23S.cif
    33812 > id 1.5 name 8b0x
    33813 
    33814 Summary of feedback from opening
    33815 /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/8b0x_x0.9933445912387006_LSQ-23S.cif 
    33816 --- 
    33817 warnings | Skipping chem_comp category: Missing column 'type' on line 4126 
    33818 Unknown polymer entity '5' on line 4377 
    33819 Unknown polymer entity '6' on line 39619 
    33820 Unknown polymer entity '7' on line 41379 
    33821 Unknown polymer entity '8' on line 43019 
    33822 Unknown polymer entity '9' on line 44676 
    33823 48 messages similar to the above omitted 
    33824 Atom N1 is not in the residue template for MS6 /l:82 
    33825 Missing or incomplete sequence information. Inferred polymer connectivity. 
    33826  
    33827 notes | Fetching CCD G7M from https://files.wwpdb.org/pub/pdb/refdata/chem_comp/M/G7M/G7M.cif 
    33828 Fetching CCD 2MG from
    33829 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/G/2MG/2MG.cif 
    33830 Fetching CCD 5MC from
    33831 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/C/5MC/5MC.cif 
    33832 Fetching CCD 4OC from
    33833 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/C/4OC/4OC.cif 
    33834 Fetching CCD UR3 from
    33835 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/3/UR3/UR3.cif 
    33836 Fetching CCD MA6 from
    33837 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/6/MA6/MA6.cif 
    33838 Fetching CCD MG from
    33839 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/G/MG/MG.cif 
    33840 Fetching CCD K from
    33841 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/K/K/K.cif 
    33842 Fetching CCD IAS from
    33843 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/S/IAS/IAS.cif 
    33844 Fetching CCD D2T from
    33845 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/T/D2T/D2T.cif 
    33846 Fetching CCD ZN from
    33847 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/N/ZN/ZN.cif 
    33848 Fetching CCD 1MG from
    33849 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/G/1MG/1MG.cif 
    33850 Fetching CCD 5MU from
    33851 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/U/5MU/5MU.cif 
    33852 Fetching CCD 6MZ from
    33853 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/Z/6MZ/6MZ.cif 
    33854 Fetching CCD 3TD from
    33855 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/D/3TD/3TD.cif 
    33856 Fetching CCD OMG from
    33857 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/G/OMG/OMG.cif 
    33858 Fetching CCD H2U from
    33859 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/U/H2U/H2U.cif 
    33860 Fetching CCD OMC from
    33861 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/C/OMC/OMC.cif 
    33862 Fetching CCD 2MA from
    33863 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/A/2MA/2MA.cif 
    33864 Fetching CCD OMU from
    33865 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/U/OMU/OMU.cif 
    33866 Fetching CCD MEQ from
    33867 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/Q/MEQ/MEQ.cif 
    33868 Fetching CCD 4D4 from
    33869 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/4/4D4/4D4.cif 
    33870 Fetching CCD MS6 from
    33871 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/6/MS6/MS6.cif 
    33872  
    33873 Chain information for 8b0x #2 
    33874 --- 
    33875 Chain | Description 
    33876 0 | No description available 
    33877 1 | No description available 
    33878 2 | No description available 
    33879 3 | No description available 
    33880 A | No description available 
    33881 B | No description available 
    33882 C | No description available 
    33883 D | No description available 
    33884 E | No description available 
    33885 F | No description available 
    33886 G | No description available 
    33887 H | No description available 
    33888 I | No description available 
    33889 J | No description available 
    33890 K | No description available 
    33891 L | No description available 
    33892 M | No description available 
    33893 N | No description available 
    33894 O | No description available 
    33895 P | No description available 
    33896 Q | No description available 
    33897 R | No description available 
    33898 S | No description available 
    33899 T | No description available 
    33900 U | No description available 
    33901 X | No description available 
    33902 Z | No description available 
    33903 a | No description available 
    33904 b | No description available 
    33905 c | No description available 
    33906 d | No description available 
    33907 e | No description available 
    33908 f | No description available 
    33909 g | No description available 
    33910 h | No description available 
    33911 i | No description available 
    33912 j | No description available 
    33913 k | No description available 
    33914 l | No description available 
    33915 m | No description available 
    33916 n | No description available 
    33917 o | No description available 
    33918 p | No description available 
    33919 q | No description available 
    33920 r | No description available 
    33921 s | No description available 
    33922 t | No description available 
    33923 u | No description available 
    33924 v | No description available 
    33925 w | No description available 
    33926 x | No description available 
    33927 y | No description available 
    33928 z | No description available 
    33929  
    33930 
    33931 > open
    33932 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/EMD16646_8cgk.mrc
    33933 > id 1.6 name 8cgk_map
    33934 
    33935 Opened 8cgk_map as #2, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    33936 level 0.0122, step 2, values float32 
    33937 
    33938 > open
    33939 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/8cgk_LSQ-23S.pdb id
    33940 > 1.7 name 8cgk
    33941 
    33942 Summary of feedback from opening
    33943 /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/8cgk_LSQ-23S.pdb 
    33944 --- 
    33945 warnings | Start residue of secondary structure not found: SHEET 1 AA1 4 PHE A 20 LYS A 25 0 
    33946 Start residue of secondary structure not found: SHEET 2 AA1 4 GLU A 7 SER A 13
    33947 -1 
    33948 Start residue of secondary structure not found: SHEET 3 AA1 4 GLN A 45 LYS A
    33949 53 -1 
    33950 Start residue of secondary structure not found: SHEET 4 AA1 4 GLU A 35 ASP A
    33951 40 -1 
    33952 Start residue of secondary structure not found: SHEET 1 AA2 3 LYS C 15 LYS C
    33953 16 0 
    33954 151 messages similar to the above omitted 
    33955  
    33956 Chain information for 8cgk #2 
    33957 --- 
    33958 Chain | Description 
    33959 0 | No description available 
    33960 1 | No description available 
    33961 2 | No description available 
    33962 3 | No description available 
    33963 a | No description available 
    33964 b | No description available 
    33965 c | No description available 
    33966 d | No description available 
    33967 e | No description available 
    33968 g | No description available 
    33969 h | No description available 
    33970 i | No description available 
    33971 j | No description available 
    33972 k | No description available 
    33973 l | No description available 
    33974 m | No description available 
    33975 o | No description available 
    33976 p | No description available 
    33977 q | No description available 
    33978 r | No description available 
    33979 s | No description available 
    33980 t | No description available 
    33981 u | No description available 
    33982 v | No description available 
    33983 w | No description available 
    33984 x | No description available 
    33985 y | No description available 
    33986 z | No description available 
    33987  
    33988 
    33989 > open
    33990 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/EMD30215_7bv8_x1.00083.mrc
    33991 > id 1.8 name 7bv8_map
    33992 
    33993 Opened 7bv8_map as #2, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    33994 at level 0.189, step 2, values float32 
    33995 
    33996 > open
    33997 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/7bv8_x1.00083_LSQ-23S.pdb
    33998 > id 1.9 name 7bv8
    33999 
    34000 Summary of feedback from opening
    34001 /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/7bv8_x1.00083_LSQ-23S.pdb 
    34002 --- 
    34003 warnings | Start residue of secondary structure not found: SHEET 1 AE6 3 THR A 35 GLU A 39 0 
    34004 Start residue of secondary structure not found: SHEET 2 AE6 3 THR A 4 GLN A 9
    34005 -1 
    34006 Start residue of secondary structure not found: SHEET 3 AE6 3 VAL A 55 GLU A
    34007 58 -1 
    34008 Start residue of secondary structure not found: SHEET 1 AE7 2 LEU B 28 VAL B
    34009 30 0 
    34010 Start residue of secondary structure not found: SHEET 2 AE7 2 LYS B 37 LEU B
    34011 39 -1 
    34012 3 messages similar to the above omitted 
    34013 End residue of secondary structure not found: SHEET 4 AE8 4 GLU C 35 PHE C 39
    34014 -1 
    34015 Start residue of secondary structure not found: SHEET 1 AE9 3 LYS E 15 LYS E
    34016 16 0 
    34017 Start residue of secondary structure not found: SHEET 2 AE9 3 PHE E 22 HIS E
    34018 24 -1 
    34019 Start residue of secondary structure not found: SHEET 3 AE9 3 ALA E 48 MET E
    34020 49 -1 
    34021 Start residue of secondary structure not found: SHEET 1 AF1 4 LYS F 2 VAL F 3
    34022 0 
    34023 Start residue of secondary structure not found: SHEET 2 AF1 4 GLN F 35 ARG F
    34024 36 1 
    34025 2 messages similar to the above omitted 
    34026  
    34027 Chain information for 7bv8 #2 
    34028 --- 
    34029 Chain | Description 
    34030 A | No description available 
    34031 B | No description available 
    34032 C | No description available 
    34033 D | No description available 
    34034 E | No description available 
    34035 F | No description available 
    34036 G | No description available 
    34037 H | No description available 
    34038 I | No description available 
    34039 J | No description available 
    34040 K | No description available 
    34041 L | No description available 
    34042 M | No description available 
    34043 N | No description available 
    34044 O | No description available 
    34045 P | No description available 
    34046 Q | No description available 
    34047 R | No description available 
    34048 S | No description available 
    34049 T | No description available 
    34050 U | No description available 
    34051 V | No description available 
    34052 W | No description available 
    34053 X | No description available 
    34054 Y | No description available 
    34055 Z | No description available 
    34056 a | No description available 
    34057 b | No description available 
    34058 c | No description available 
    34059 d | No description available 
    34060 e | No description available 
    34061 f | No description available 
    34062  
    34063 78 atoms have alternate locations. Control/examine alternate locations with
    34064 Altloc Explorer [start tool...] or the altlocs command. 
    34065 
    34066 > open
    34067 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/EMD12694_7o1a_x0.9952.mrc
    34068 > id 1.10 name 7o1a_map
    34069 
    34070 Opened 7o1a_map as #2, grid size 391,421,391, pixel 0.705,0.705,0.705, shown
    34071 at level 0.0279, step 2, values float32 
    34072 
    34073 > open
    34074 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/7o1a_x0.9952_LSQ-23S.pdb
    34075 > id 1.11 name 7o1a
    34076 
    34077 Summary of feedback from opening
    34078 /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/7o1a_x0.9952_LSQ-23S.pdb 
    34079 --- 
    34080 warnings | Start residue of secondary structure not found: SHEET 1 AA1 1 0 0 0 
    34081 PDB SEQRES record for chain A is incomplete. Ignoring input sequence records
    34082 as basis for sequence. 
    34083  
    34084 Chain information for 7o1a #2 
    34085 --- 
    34086 Chain | Description 
    34087 A | No description available 
    34088 AA | No description available 
    34089 AB | No description available 
    34090 AL | No description available 
    34091 AU | No description available 
    34092 B | No description available 
    34093 B0 | No description available 
    34094 B1 | No description available 
    34095 B2 | No description available 
    34096 B3 | No description available 
    34097 B4 | No description available 
    34098 B5 | No description available 
    34099 B7 | No description available 
    34100 B8 | No description available 
    34101 BA | No description available 
    34102 BD | No description available 
    34103 BM | No description available 
    34104 BU | No description available 
    34105 BV | No description available 
    34106 BW | No description available 
    34107 BX | No description available 
    34108 BY | No description available 
    34109 BZ | No description available 
    34110  
    34111 
    34112 > open
    34113 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9j216-coot-75-noPTC-
    34114 > noHOH-x0.9933445912387006A.pdb id 1.12 name d9c75noPTC
    34115 
    34116 Summary of feedback from opening
    34117 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9j216-coot-75-noPTC-
    34118 noHOH-x0.9933445912387006A.pdb 
    34119 --- 
    34120 warnings | End residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l 125 1 17 
    34121 Start residue of secondary structure not found: SHEET 1 49 2 GLY l 37 ARG l 40
    34122 0 
    34123 Start residue of secondary structure not found: SHEET 2 49 2 LEU l 95 PRO l 98
    34124 -1 
    34125 End residue of secondary structure not found: SHEET 3 50 4 SER l 30 VAL l 36
    34126 -1 N LEU l 33 O TYR l 103 
    34127 Start residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l
    34128 102 -1 N LEU l 102 O LEU l 33 
    34129 End residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36 0 
    34130 Start residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l
    34131 133 -1 N LYS l 133 O SER l 30 
    34132 Cannot find LINK/SSBOND residue A (1784 ) 
    34133 Cannot find LINK/SSBOND residue K (3123 ) 
    34134 Cannot find LINK/SSBOND residue K (3129 ) 
    34135 Cannot find LINK/SSBOND residue MG (3197 ) 
    34136 Cannot find LINK/SSBOND residue MG (3220 ) 
    34137 6 messages similar to the above omitted 
    34138  
    34139 Chain information for d9c75noPTC #2 
    34140 --- 
    34141 Chain | Description 
    34142 0 | No description available 
    34143 1 | No description available 
    34144 2 | No description available 
    34145 3 | No description available 
    34146 4 | No description available 
    34147 5 | No description available 
    34148 A | No description available 
    34149 A | No description available 
    34150 B | No description available 
    34151 C | No description available 
    34152 D | No description available 
    34153 E | No description available 
    34154 F | No description available 
    34155 G | No description available 
    34156 H | No description available 
    34157 I | No description available 
    34158 J | No description available 
    34159 K | No description available 
    34160 L | No description available 
    34161 M | No description available 
    34162 N | No description available 
    34163 O | No description available 
    34164 P | No description available 
    34165 Q | No description available 
    34166 R | No description available 
    34167 S | No description available 
    34168 T | No description available 
    34169 U | No description available 
    34170 X | No description available 
    34171 Y | No description available 
    34172 Z | No description available 
    34173 a | No description available 
    34174 b | No description available 
    34175 c | No description available 
    34176 d | No description available 
    34177 e | No description available 
    34178 f | No description available 
    34179 g | No description available 
    34180 h | No description available 
    34181 i | No description available 
    34182 j | No description available 
    34183 k | No description available 
    34184 l | No description available 
    34185 m | No description available 
    34186 n | No description available 
    34187 o | No description available 
    34188 p | No description available 
    34189 q | No description available 
    34190 r | No description available 
    34191 s | No description available 
    34192 t | No description available 
    34193 u | No description available 
    34194 v | No description available 
    34195 w | No description available 
    34196 x | No description available 
    34197 y | No description available 
    34198 z | No description available 
    34199  
    34200 
    34201 > rename #1 references
    34202 
    34203 > hide #!1.12 models
    34204 
    34205 > show #!1.12 models
    34206 
    34207 > hide #!1.11 models
    34208 
    34209 > hide #!1.12 models
    34210 
    34211 > hide #!1.10 models
    34212 
    34213 > hide #!1.9 models
    34214 
    34215 > hide #!1.8 models
    34216 
    34217 > hide #!1.7 models
    34218 
    34219 > hide #!1.6 models
    34220 
    34221 > hide #!1.1-3,5 target m
    34222 
    34223 > show #!1.5 models
    34224 
    34225 > show #!1.3 models
    34226 
    34227 > hide #!1.5 models
    34228 
    34229 > show #!1.5 models
    34230 
    34231 > hide #!1.5 models
    34232 
    34233 > show #!1.5 models
    34234 
    34235 > hide #!1.5 models
    34236 
    34237 > hide #!1.3 models
    34238 
    34239 > show #!1.1 models
    34240 
    34241 > show #!1.2 models
    34242 
    34243 > hide #!1.2 models
    34244 
    34245 > hide #!1.1 models
    34246 
    34247 > show #!1.6 models
    34248 
    34249 > show #!1.7 models
    34250 
    34251 > hide #!1.7 models
    34252 
    34253 > hide #!1.6 models
    34254 
    34255 > show #!1.8 models
    34256 
    34257 > show #!1.9 models
    34258 
    34259 > hide #!1.9 models
    34260 
    34261 > show #!1.9 models
    34262 
    34263 > hide #!1.9 models
    34264 
    34265 > show #!1.10 models
    34266 
    34267 > hide #!1.8 models
    34268 
    34269 > show #!1.11 models
    34270 
    34271 > hide #!1.11 models
    34272 
    34273 > show #!1.11 models
    34274 
    34275 > hide #!1.11 models
    34276 
    34277 > show #!1.11 models
    34278 
    34279 > hide #!1.10 models
    34280 
    34281 > hide #!1.11 models
    34282 
    34283 > open
    34284 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/EMD16530_8cam.mrc
    34285 > id 1.12 name 8cam_map
    34286 
    34287 Opened 8cam_map as #2, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34288 level 0.0354, step 2, values float32 
    34289 
    34290 > open
    34291 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/8cam_fit_d9_j167_0.7Apix.cif
    34292 > id 1.13 name 8cam
    34293 
    34294 Summary of feedback from opening
    34295 /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/8cam_fit_d9_j167_0.7Apix.cif 
    34296 --- 
    34297 notes | Fetching CCD 6O1 from https://files.wwpdb.org/pub/pdb/refdata/chem_comp/1/6O1/6O1.cif 
    34298 Fetching CCD ACT from
    34299 https://files.wwpdb.org/pub/pdb/refdata/chem_comp/T/ACT/ACT.cif 
    34300  
    34301 Chain information for 8cam #2 
    34302 --- 
    34303 Chain | Description 
    34304 0 | Large ribosomal subunit protein bL33 
    34305 1 | Large ribosomal subunit protein bL34 
    34306 2 | Large ribosomal subunit protein bL35 
    34307 3 | Large ribosomal subunit protein bL36A 
    34308 a | 23S rRNA 
    34309 b | 5S rRNA 
    34310 c | Large ribosomal subunit protein uL2 
    34311 d | Large ribosomal subunit protein uL3 
    34312 e | Large ribosomal subunit protein uL4 
    34313 g | Large ribosomal subunit protein uL6 
    34314 h | Large ribosomal subunit protein bL9 
    34315 i | Large ribosomal subunit protein uL13 
    34316 j | Large ribosomal subunit protein uL14 
    34317 k | 50S ribosomal protein L15 
    34318 l | Large ribosomal subunit protein uL16 
    34319 m | Large ribosomal subunit protein bL17 
    34320 o | Large ribosomal subunit protein bL19 
    34321 p | Large ribosomal subunit protein bL20 
    34322 q | Large ribosomal subunit protein bL21 
    34323 r | Large ribosomal subunit protein uL22 
    34324 s | Large ribosomal subunit protein uL23 
    34325 t | Large ribosomal subunit protein uL24 
    34326 u | 50S ribosomal protein L25 
    34327 v | Large ribosomal subunit protein bL27 
    34328 w | Large ribosomal subunit protein bL28 
    34329 x | Large ribosomal subunit protein uL29 
    34330 y | Large ribosomal subunit protein uL30 
    34331 z | Large ribosomal subunit protein bL32 
    34332  
    34333 
    34334 > close #1.13
    34335 
    34336 > open
    34337 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/EMD16530_8cam.mrc
    34338 > id 1.12 name 8cam_map
    34339 
    34340 Opened 8cam_map as #2, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34341 level 0.0354, step 2, values float32 
    34342 
    34343 > close #1.12
    34344 
    34345 > open
    34346 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9j216-coot-75-noPTC-
    34347 > noHOH-x0.9933445912387006A.pdb id 1.12 name d9c75noPTC
    34348 
    34349 Summary of feedback from opening
    34350 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9j216-coot-75-noPTC-
    34351 noHOH-x0.9933445912387006A.pdb 
    34352 --- 
    34353 warnings | End residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l 125 1 17 
    34354 Start residue of secondary structure not found: SHEET 1 49 2 GLY l 37 ARG l 40
    34355 0 
    34356 Start residue of secondary structure not found: SHEET 2 49 2 LEU l 95 PRO l 98
    34357 -1 
    34358 End residue of secondary structure not found: SHEET 3 50 4 SER l 30 VAL l 36
    34359 -1 N LEU l 33 O TYR l 103 
    34360 Start residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l
    34361 102 -1 N LEU l 102 O LEU l 33 
    34362 End residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36 0 
    34363 Start residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l
    34364 133 -1 N LYS l 133 O SER l 30 
    34365 Cannot find LINK/SSBOND residue A (1784 ) 
    34366 Cannot find LINK/SSBOND residue K (3123 ) 
    34367 Cannot find LINK/SSBOND residue K (3129 ) 
    34368 Cannot find LINK/SSBOND residue MG (3197 ) 
    34369 Cannot find LINK/SSBOND residue MG (3220 ) 
    34370 6 messages similar to the above omitted 
    34371  
    34372 Chain information for d9c75noPTC #2 
    34373 --- 
    34374 Chain | Description 
    34375 0 | No description available 
    34376 1 | No description available 
    34377 2 | No description available 
    34378 3 | No description available 
    34379 4 | No description available 
    34380 5 | No description available 
    34381 A | No description available 
    34382 A | No description available 
    34383 B | No description available 
    34384 C | No description available 
    34385 D | No description available 
    34386 E | No description available 
    34387 F | No description available 
    34388 G | No description available 
    34389 H | No description available 
    34390 I | No description available 
    34391 J | No description available 
    34392 K | No description available 
    34393 L | No description available 
    34394 M | No description available 
    34395 N | No description available 
    34396 O | No description available 
    34397 P | No description available 
    34398 Q | No description available 
    34399 R | No description available 
    34400 S | No description available 
    34401 T | No description available 
    34402 U | No description available 
    34403 X | No description available 
    34404 Y | No description available 
    34405 Z | No description available 
    34406 a | No description available 
    34407 b | No description available 
    34408 c | No description available 
    34409 d | No description available 
    34410 e | No description available 
    34411 f | No description available 
    34412 g | No description available 
    34413 h | No description available 
    34414 i | No description available 
    34415 j | No description available 
    34416 k | No description available 
    34417 l | No description available 
    34418 m | No description available 
    34419 n | No description available 
    34420 o | No description available 
    34421 p | No description available 
    34422 q | No description available 
    34423 r | No description available 
    34424 s | No description available 
    34425 t | No description available 
    34426 u | No description available 
    34427 v | No description available 
    34428 w | No description available 
    34429 x | No description available 
    34430 y | No description available 
    34431 z | No description available 
    34432  
    34433 
    34434 > open
    34435 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/EMD16530_8cam.mrc
    34436 > id 1.13 name 8cam_map
    34437 
    34438 Opened 8cam_map as #2, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34439 level 0.0354, step 2, values float32 
    34440 
    34441 > open
    34442 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/8cam_fit_d9_j167_0.7Apix.cif
    34443 > id 1.14 name 8cam
    34444 
    34445 Chain information for 8cam #2 
    34446 --- 
    34447 Chain | Description 
    34448 0 | Large ribosomal subunit protein bL33 
    34449 1 | Large ribosomal subunit protein bL34 
    34450 2 | Large ribosomal subunit protein bL35 
    34451 3 | Large ribosomal subunit protein bL36A 
    34452 a | 23S rRNA 
    34453 b | 5S rRNA 
    34454 c | Large ribosomal subunit protein uL2 
    34455 d | Large ribosomal subunit protein uL3 
    34456 e | Large ribosomal subunit protein uL4 
    34457 g | Large ribosomal subunit protein uL6 
    34458 h | Large ribosomal subunit protein bL9 
    34459 i | Large ribosomal subunit protein uL13 
    34460 j | Large ribosomal subunit protein uL14 
    34461 k | 50S ribosomal protein L15 
    34462 l | Large ribosomal subunit protein uL16 
    34463 m | Large ribosomal subunit protein bL17 
    34464 o | Large ribosomal subunit protein bL19 
    34465 p | Large ribosomal subunit protein bL20 
    34466 q | Large ribosomal subunit protein bL21 
    34467 r | Large ribosomal subunit protein uL22 
    34468 s | Large ribosomal subunit protein uL23 
    34469 t | Large ribosomal subunit protein uL24 
    34470 u | 50S ribosomal protein L25 
    34471 v | Large ribosomal subunit protein bL27 
    34472 w | Large ribosomal subunit protein bL28 
    34473 x | Large ribosomal subunit protein uL29 
    34474 y | Large ribosomal subunit protein uL30 
    34475 z | Large ribosomal subunit protein bL32 
    34476  
    34477 
    34478 > hide #!1.12 models
    34479 
    34480 > hide #!1.13 models
    34481 
    34482 > hide #!1.14 models
    34483 
    34484 > show #!1.14 models
    34485 
    34486 > hide #!1.14 models
    34487 
    34488 > show #!1.14 models
    34489 
    34490 > hide #!1.14 models
    34491 
    34492 > show #!1.13 models
    34493 
    34494 > hide #!1.13 models
    34495 
    34496 > show #!1.13 models
    34497 
    34498 > show #!1.6 models
    34499 
    34500 > hide #!1.6 models
    34501 
    34502 > hide #!1.13 models
    34503 
    34504 > open
    34505 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_refine3d_job207_classAPE_0.7Apix.mrc
    34506 > id 2.1 name d9_ape
    34507 
    34508 Opened d9_ape as #2, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    34509 0.0289, step 2, values float32 
    34510 
    34511 > open
    34512 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_refine3d_job191_APe1_0.7Apix.mrc
    34513 > id 2.2 name d9_ape1
    34514 
    34515 Opened d9_ape1 as #3, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    34516 0.0292, step 2, values float32 
    34517 
    34518 > open
    34519 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_refine3d_job192_ape2_0.7Apix.mrc
    34520 > id 2.3 name d9_ape2
    34521 
    34522 Opened d9_ape2 as #3, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    34523 0.0262, step 2, values float32 
    34524 
    34525 > open
    34526 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_refine3d_job193_APe3_0.7Apix.mrc
    34527 > id 2.4 name d9_ape3
    34528 
    34529 Opened d9_ape3 as #3, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    34530 0.028, step 2, values float32 
    34531 
    34532 > open
    34533 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_refine3d_job188_PE_0.7Apix.mrc
    34534 > id 2.5 name d9_pe
    34535 
    34536 Opened d9_pe as #3, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    34537 0.0288, step 2, values float32 
    34538 
    34539 > open
    34540 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_refine3d_job190_e_0.7Apix.mrc
    34541 > id 2.6 name d9_e
    34542 
    34543 Opened d9_e as #3, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    34544 0.0246, step 2, values float32 
    34545 
    34546 > rename #2 d9
    34547 
    34548 > open
    34549 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_localres_job216_classAPE_0.7Apix.mrc
    34550 > id 3.1 name d9_ape
    34551 
    34552 Opened d9_ape as #3, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    34553 0.0963, step 2, values float32 
    34554 
    34555 > open
    34556 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_localres_job211_classAPE1_0.7Apix.mrc
    34557 > id 3.2 name d9_ape1
    34558 
    34559 Opened d9_ape1 as #4, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    34560 0.0936, step 2, values float32 
    34561 
    34562 > open
    34563 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_localres_job212_classAPE2_0.7Apix.mrc
    34564 > id 3.3 name d9_ape2
    34565 
    34566 Opened d9_ape2 as #4, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    34567 0.0768, step 2, values float32 
    34568 
    34569 > open
    34570 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_localres_job213_classAPE3_0.7Apix.mrc
    34571 > id 3.4 name d9_ape3
    34572 
    34573 Opened d9_ape3 as #4, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    34574 0.0872, step 2, values float32 
    34575 
    34576 > open
    34577 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_localres_job208_classPE_0.7Apix.mrc
    34578 > id 3.5 name d9_pe
    34579 
    34580 Opened d9_pe as #4, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    34581 0.0944, step 2, values float32 
    34582 
    34583 > open
    34584 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_localres_job210_classE_0.7Apix.mrc
    34585 > id 3.6 name d9_e
    34586 
    34587 Opened d9_e as #4, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    34588 0.0736, step 2, values float32 
    34589 
    34590 > rename #3 d9-sharp
    34591 
    34592 > open
    34593 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_NU_J83_PTCclass0_0.7Apix.mrc
    34594 > id 4.10 name d9_J83_cl0
    34595 
    34596 Opened d9_J83_cl0 as #4, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34597 level 0.884, step 2, values float32 
    34598 
    34599 > open
    34600 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_NU_J84_PTCclass1_0.7Apix.mrc
    34601 > id 4.1 name d9_J84_cl1
    34602 
    34603 Opened d9_J84_cl1 as #5, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34604 level 0.894, step 2, values float32 
    34605 
    34606 > open
    34607 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_NU_J85_PTCclass2_0.7Apix.mrc
    34608 > id 4.2 name d9_J85_cl2
    34609 
    34610 Opened d9_J85_cl2 as #5, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34611 level 0.885, step 2, values float32 
    34612 
    34613 > open
    34614 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_NU_J86_PTCclass3_0.7Apix.mrc
    34615 > id 4.3 name d9_J86_cl3
    34616 
    34617 Opened d9_J86_cl3 as #5, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34618 level 0.89, step 2, values float32 
    34619 
    34620 > open
    34621 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_NU_J87_PTCclass4_0.7Apix.mrc
    34622 > id 4.4 name d9_J87_cl4
    34623 
    34624 Opened d9_J87_cl4 as #5, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34625 level 0.888, step 2, values float32 
    34626 
    34627 > open
    34628 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_NU_J88_PTCclass5_0.7Apix.mrc
    34629 > id 4.5 name d9_J88_cl5
    34630 
    34631 Opened d9_J88_cl5 as #5, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34632 level 0.878, step 2, values float32 
    34633 
    34634 > open
    34635 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_NU_J89_PTCclass6_0.7Apix.mrc
    34636 > id 4.6 name d9_J89_cl6
    34637 
    34638 Opened d9_J89_cl6 as #5, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34639 level 0.887, step 2, values float32 
    34640 
    34641 > open
    34642 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_NU_J90_PTCclass7_0.7Apix.mrc
    34643 > id 4.7 name d9_J90_cl7
    34644 
    34645 Opened d9_J90_cl7 as #5, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34646 level 0.888, step 2, values float32 
    34647 
    34648 > open
    34649 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_NU_J91_PTCclass8_0.7Apix.mrc
    34650 > id 4.8 name d9_J91_cl8
    34651 
    34652 Opened d9_J91_cl8 as #5, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34653 level 0.919, step 2, values float32 
    34654 
    34655 > open
    34656 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_NU_J92_PTCclass9_0.7Apix.mrc
    34657 > id 4.9 name d9_J92_cl9
    34658 
    34659 Opened d9_J92_cl9 as #5, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34660 level 0.883, step 2, values float32 
    34661 
    34662 > rename #4 d9-PTC
    34663 
    34664 > open
    34665 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_LF_J127_PTCclass0_0.7Apix.mrc
    34666 > id 5.10 name d9_J83_cl0
    34667 
    34668 Opened d9_J83_cl0 as #5, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34669 level 1.33, step 2, values float32 
    34670 
    34671 > open
    34672 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_LF_J128_PTCclass1_0.7Apix.mrc
    34673 > id 5.1 name d9_J84_cl1
    34674 
    34675 Opened d9_J84_cl1 as #6, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34676 level 1.42, step 2, values float32 
    34677 
    34678 > open
    34679 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_LF_J129_PTCclass2_0.7Apix.mrc
    34680 > id 5.2 name d9_J85_cl2
    34681 
    34682 Opened d9_J85_cl2 as #6, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34683 level 1.38, step 2, values float32 
    34684 
    34685 > open
    34686 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_LF_J130_PTCclass3_0.7Apix.mrc
    34687 > id 5.3 name d9_J86_cl3
    34688 
    34689 Opened d9_J86_cl3 as #6, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34690 level 1.39, step 2, values float32 
    34691 
    34692 > open
    34693 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_LF_J131_PTCclass4_0.7Apix.mrc
    34694 > id 5.4 name d9_J87_cl4
    34695 
    34696 Opened d9_J87_cl4 as #6, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34697 level 1.38, step 2, values float32 
    34698 
    34699 > open
    34700 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_LF_J132_PTCclass5_0.7Apix.mrc
    34701 > id 5.5 name d9_J88_cl5
    34702 
    34703 Opened d9_J88_cl5 as #6, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34704 level 1.35, step 2, values float32 
    34705 
    34706 > open
    34707 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_LF_J133_PTCclass6_0.7Apix.mrc
    34708 > id 5.6 name d9_J89_cl6
    34709 
    34710 Opened d9_J89_cl6 as #6, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34711 level 1.38, step 2, values float32 
    34712 
    34713 > open
    34714 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_LF_J134_PTCclass7_0.7Apix.mrc
    34715 > id 5.7 name d9_J90_cl7
    34716 
    34717 Opened d9_J90_cl7 as #6, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34718 level 1.39, step 2, values float32 
    34719 
    34720 > open
    34721 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_LF_J135_PTCclass8_0.7Apix.mrc
    34722 > id 5.8 name d9_J91_cl8
    34723 
    34724 Opened d9_J91_cl8 as #6, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34725 level 1.41, step 2, values float32 
    34726 
    34727 > open
    34728 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta9_LF_J136_PTCclass9_0.7Apix.mrc
    34729 > id 5.9 name d9_J92_cl9
    34730 
    34731 Opened d9_J92_cl9 as #6, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    34732 level 1.37, step 2, values float32 
    34733 
    34734 > rename #5 d9-PTC-sharp
    34735 
    34736 > open
    34737 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J83-coot-9.pdb
    34738 > id 6.10 name d9_J83_cl0
    34739 
    34740 Summary of feedback from opening
    34741 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J83-coot-9.pdb 
    34742 --- 
    34743 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    34744 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    34745 6 
    34746 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    34747 8 
    34748 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    34749 23 
    34750 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    34751 13 
    34752 320 messages similar to the above omitted 
    34753 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    34754 -1 N LEU l 102 O LEU l 33 
    34755 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    34756 0 
    34757 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    34758 -1 N LYS l 133 O SER l 30 
    34759 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    34760 0 
    34761 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    34762 115 -1 N ILE m 113 O ILE m 34 
    34763 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    34764 103 -1 N CYS m 100 O MET m 110 
    34765 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    34766 0 
    34767 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    34768 -1 N VAL n 39 O VAL n 49 
    34769 55 messages similar to the above omitted 
    34770 Cannot find LINK/SSBOND residue ZN (101 ) 
    34771 Cannot find LINK/SSBOND residue ZN (101 ) 
    34772 Cannot find LINK/SSBOND residue ZN (101 ) 
    34773 Cannot find LINK/SSBOND residue ZN (101 ) 
    34774  
    34775 Chain information for d9_J83_cl0 #6 
    34776 --- 
    34777 Chain | Description 
    34778 3 | No description available 
    34779 a | No description available 
    34780 b | No description available 
    34781 c | No description available 
    34782 e | No description available 
    34783 l | No description available 
    34784  
    34785 
    34786 > open
    34787 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J84-coot-9.pdb
    34788 > id 6.1 name d9_J84_cl1
    34789 
    34790 Summary of feedback from opening
    34791 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J84-coot-9.pdb 
    34792 --- 
    34793 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    34794 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    34795 6 
    34796 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    34797 8 
    34798 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    34799 23 
    34800 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    34801 13 
    34802 320 messages similar to the above omitted 
    34803 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    34804 -1 N LEU l 102 O LEU l 33 
    34805 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    34806 0 
    34807 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    34808 -1 N LYS l 133 O SER l 30 
    34809 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    34810 0 
    34811 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    34812 115 -1 N ILE m 113 O ILE m 34 
    34813 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    34814 103 -1 N CYS m 100 O MET m 110 
    34815 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    34816 0 
    34817 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    34818 -1 N VAL n 39 O VAL n 49 
    34819 55 messages similar to the above omitted 
    34820 Cannot find LINK/SSBOND residue ZN (101 ) 
    34821 Cannot find LINK/SSBOND residue ZN (101 ) 
    34822 Cannot find LINK/SSBOND residue ZN (101 ) 
    34823 Cannot find LINK/SSBOND residue ZN (101 ) 
    34824  
    34825 Chain information for d9_J84_cl1 #7 
    34826 --- 
    34827 Chain | Description 
    34828 3 | No description available 
    34829 Y | No description available 
    34830 Z | No description available 
    34831 a | No description available 
    34832 b | No description available 
    34833 c | No description available 
    34834 e | No description available 
    34835 l | No description available 
    34836 v | No description available 
    34837  
    34838 
    34839 > open
    34840 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J85-coot-9.pdb
    34841 > id 6.2 name d9_J85_cl2
    34842 
    34843 Summary of feedback from opening
    34844 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J85-coot-9.pdb 
    34845 --- 
    34846 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    34847 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    34848 6 
    34849 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    34850 8 
    34851 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    34852 23 
    34853 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    34854 13 
    34855 320 messages similar to the above omitted 
    34856 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    34857 -1 N LEU l 102 O LEU l 33 
    34858 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    34859 0 
    34860 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    34861 -1 N LYS l 133 O SER l 30 
    34862 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    34863 0 
    34864 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    34865 115 -1 N ILE m 113 O ILE m 34 
    34866 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    34867 103 -1 N CYS m 100 O MET m 110 
    34868 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    34869 0 
    34870 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    34871 -1 N VAL n 39 O VAL n 49 
    34872 55 messages similar to the above omitted 
    34873 Cannot find LINK/SSBOND residue ZN (101 ) 
    34874 Cannot find LINK/SSBOND residue ZN (101 ) 
    34875 Cannot find LINK/SSBOND residue ZN (101 ) 
    34876 Cannot find LINK/SSBOND residue ZN (101 ) 
    34877  
    34878 Chain information for d9_J85_cl2 #7 
    34879 --- 
    34880 Chain | Description 
    34881 3 | No description available 
    34882 Y | No description available 
    34883 Z | No description available 
    34884 a | No description available 
    34885 b | No description available 
    34886 c | No description available 
    34887 e | No description available 
    34888 l | No description available 
    34889 v | No description available 
    34890  
    34891 
    34892 > open
    34893 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J86-coot-9.pdb
    34894 > id 6.3 name d9_J86_cl3
    34895 
    34896 Summary of feedback from opening
    34897 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J86-coot-9.pdb 
    34898 --- 
    34899 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    34900 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    34901 6 
    34902 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    34903 8 
    34904 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    34905 23 
    34906 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    34907 13 
    34908 320 messages similar to the above omitted 
    34909 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    34910 -1 N LEU l 102 O LEU l 33 
    34911 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    34912 0 
    34913 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    34914 -1 N LYS l 133 O SER l 30 
    34915 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    34916 0 
    34917 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    34918 115 -1 N ILE m 113 O ILE m 34 
    34919 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    34920 103 -1 N CYS m 100 O MET m 110 
    34921 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    34922 0 
    34923 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    34924 -1 N VAL n 39 O VAL n 49 
    34925 55 messages similar to the above omitted 
    34926 Cannot find LINK/SSBOND residue ZN (101 ) 
    34927 Cannot find LINK/SSBOND residue ZN (101 ) 
    34928 Cannot find LINK/SSBOND residue ZN (101 ) 
    34929 Cannot find LINK/SSBOND residue ZN (101 ) 
    34930  
    34931 Chain information for d9_J86_cl3 #7 
    34932 --- 
    34933 Chain | Description 
    34934 3 | No description available 
    34935 Y | No description available 
    34936 Z | No description available 
    34937 a | No description available 
    34938 b | No description available 
    34939 c | No description available 
    34940 e | No description available 
    34941 l | No description available 
    34942  
    34943 
    34944 > open
    34945 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J87-coot-9.pdb
    34946 > id 6.4 name d9_J87_cl4
    34947 
    34948 Summary of feedback from opening
    34949 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J87-coot-9.pdb 
    34950 --- 
    34951 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    34952 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    34953 6 
    34954 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    34955 8 
    34956 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    34957 23 
    34958 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    34959 13 
    34960 320 messages similar to the above omitted 
    34961 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    34962 -1 N LEU l 102 O LEU l 33 
    34963 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    34964 0 
    34965 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    34966 -1 N LYS l 133 O SER l 30 
    34967 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    34968 0 
    34969 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    34970 115 -1 N ILE m 113 O ILE m 34 
    34971 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    34972 103 -1 N CYS m 100 O MET m 110 
    34973 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    34974 0 
    34975 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    34976 -1 N VAL n 39 O VAL n 49 
    34977 55 messages similar to the above omitted 
    34978 Cannot find LINK/SSBOND residue ZN (101 ) 
    34979 Cannot find LINK/SSBOND residue ZN (101 ) 
    34980 Cannot find LINK/SSBOND residue ZN (101 ) 
    34981 Cannot find LINK/SSBOND residue ZN (101 ) 
    34982  
    34983 Chain information for d9_J87_cl4 #7 
    34984 --- 
    34985 Chain | Description 
    34986 3 | No description available 
    34987 Y | No description available 
    34988 Z | No description available 
    34989 a | No description available 
    34990 b | No description available 
    34991 c | No description available 
    34992 e | No description available 
    34993 l | No description available 
    34994  
    34995 
    34996 > open
    34997 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J88-coot-9.pdb
    34998 > id 6.5 name d9_J88_cl5
    34999 
    35000 Summary of feedback from opening
    35001 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J88-coot-9.pdb 
    35002 --- 
    35003 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    35004 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    35005 6 
    35006 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    35007 8 
    35008 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    35009 23 
    35010 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    35011 13 
    35012 320 messages similar to the above omitted 
    35013 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    35014 -1 N LEU l 102 O LEU l 33 
    35015 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    35016 0 
    35017 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    35018 -1 N LYS l 133 O SER l 30 
    35019 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    35020 0 
    35021 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    35022 115 -1 N ILE m 113 O ILE m 34 
    35023 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    35024 103 -1 N CYS m 100 O MET m 110 
    35025 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    35026 0 
    35027 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    35028 -1 N VAL n 39 O VAL n 49 
    35029 55 messages similar to the above omitted 
    35030 Cannot find LINK/SSBOND residue ZN (101 ) 
    35031 Cannot find LINK/SSBOND residue ZN (101 ) 
    35032 Cannot find LINK/SSBOND residue ZN (101 ) 
    35033 Cannot find LINK/SSBOND residue ZN (101 ) 
    35034  
    35035 Chain information for d9_J88_cl5 #7 
    35036 --- 
    35037 Chain | Description 
    35038 3 | No description available 
    35039 Z | No description available 
    35040 a | No description available 
    35041 b | No description available 
    35042 c | No description available 
    35043 e | No description available 
    35044 l | No description available 
    35045  
    35046 
    35047 > open
    35048 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J89-coot-9.pdb
    35049 > id 6.6 name d9_J89_cl6
    35050 
    35051 Summary of feedback from opening
    35052 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J89-coot-9.pdb 
    35053 --- 
    35054 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    35055 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    35056 6 
    35057 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    35058 8 
    35059 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    35060 23 
    35061 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    35062 13 
    35063 320 messages similar to the above omitted 
    35064 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    35065 -1 N LEU l 102 O LEU l 33 
    35066 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    35067 0 
    35068 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    35069 -1 N LYS l 133 O SER l 30 
    35070 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    35071 0 
    35072 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    35073 115 -1 N ILE m 113 O ILE m 34 
    35074 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    35075 103 -1 N CYS m 100 O MET m 110 
    35076 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    35077 0 
    35078 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    35079 -1 N VAL n 39 O VAL n 49 
    35080 55 messages similar to the above omitted 
    35081 Cannot find LINK/SSBOND residue ZN (101 ) 
    35082 Cannot find LINK/SSBOND residue ZN (101 ) 
    35083 Cannot find LINK/SSBOND residue ZN (101 ) 
    35084 Cannot find LINK/SSBOND residue ZN (101 ) 
    35085  
    35086 Chain information for d9_J89_cl6 #7 
    35087 --- 
    35088 Chain | Description 
    35089 3 | No description available 
    35090 Y | No description available 
    35091 Z | No description available 
    35092 a | No description available 
    35093 b | No description available 
    35094 c | No description available 
    35095 e | No description available 
    35096 l | No description available 
    35097  
    35098 
    35099 > open
    35100 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J90-coot-9.pdb
    35101 > id 6.7 name d9_J90_cl7
    35102 
    35103 Summary of feedback from opening
    35104 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J90-coot-9.pdb 
    35105 --- 
    35106 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    35107 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    35108 6 
    35109 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    35110 8 
    35111 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    35112 23 
    35113 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    35114 13 
    35115 320 messages similar to the above omitted 
    35116 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    35117 -1 N LEU l 102 O LEU l 33 
    35118 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    35119 0 
    35120 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    35121 -1 N LYS l 133 O SER l 30 
    35122 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    35123 0 
    35124 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    35125 115 -1 N ILE m 113 O ILE m 34 
    35126 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    35127 103 -1 N CYS m 100 O MET m 110 
    35128 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    35129 0 
    35130 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    35131 -1 N VAL n 39 O VAL n 49 
    35132 55 messages similar to the above omitted 
    35133 Cannot find LINK/SSBOND residue ZN (101 ) 
    35134 Cannot find LINK/SSBOND residue ZN (101 ) 
    35135 Cannot find LINK/SSBOND residue ZN (101 ) 
    35136 Cannot find LINK/SSBOND residue ZN (101 ) 
    35137  
    35138 Chain information for d9_J90_cl7 #7 
    35139 --- 
    35140 Chain | Description 
    35141 3 | No description available 
    35142 Y | No description available 
    35143 Z | No description available 
    35144 a | No description available 
    35145 b | No description available 
    35146 c | No description available 
    35147 e | No description available 
    35148 l | No description available 
    35149 v | No description available 
    35150  
    35151 
    35152 > open
    35153 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J91-coot-9.pdb
    35154 > id 6.8 name d9_J91_cl8
    35155 
    35156 Summary of feedback from opening
    35157 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J91-coot-9.pdb 
    35158 --- 
    35159 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    35160 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    35161 6 
    35162 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    35163 8 
    35164 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    35165 23 
    35166 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    35167 13 
    35168 320 messages similar to the above omitted 
    35169 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    35170 -1 N LEU l 102 O LEU l 33 
    35171 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    35172 0 
    35173 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    35174 -1 N LYS l 133 O SER l 30 
    35175 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    35176 0 
    35177 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    35178 115 -1 N ILE m 113 O ILE m 34 
    35179 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    35180 103 -1 N CYS m 100 O MET m 110 
    35181 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    35182 0 
    35183 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    35184 -1 N VAL n 39 O VAL n 49 
    35185 55 messages similar to the above omitted 
    35186 Cannot find LINK/SSBOND residue ZN (101 ) 
    35187 Cannot find LINK/SSBOND residue ZN (101 ) 
    35188 Cannot find LINK/SSBOND residue ZN (101 ) 
    35189 Cannot find LINK/SSBOND residue ZN (101 ) 
    35190  
    35191 Chain information for d9_J91_cl8 #7 
    35192 --- 
    35193 Chain | Description 
    35194 3 | No description available 
    35195 Z | No description available 
    35196 a | No description available 
    35197 b | No description available 
    35198 c | No description available 
    35199 e | No description available 
    35200 l | No description available 
    35201  
    35202 
    35203 > open
    35204 > /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J92-coot-9.pdb
    35205 > id 6.9 name d9_J92_cl9
    35206 
    35207 Summary of feedback from opening
    35208 /Users/dalar193/wd/deltaRibosomes/modelling/delta9/CS-J83-92/d9J92-coot-9.pdb 
    35209 --- 
    35210 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    35211 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    35212 6 
    35213 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    35214 8 
    35215 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    35216 23 
    35217 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    35218 13 
    35219 320 messages similar to the above omitted 
    35220 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    35221 -1 N LEU l 102 O LEU l 33 
    35222 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    35223 0 
    35224 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    35225 -1 N LYS l 133 O SER l 30 
    35226 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    35227 0 
    35228 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    35229 115 -1 N ILE m 113 O ILE m 34 
    35230 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    35231 103 -1 N CYS m 100 O MET m 110 
    35232 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    35233 0 
    35234 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    35235 -1 N VAL n 39 O VAL n 49 
    35236 55 messages similar to the above omitted 
    35237 Cannot find LINK/SSBOND residue ZN (101 ) 
    35238 Cannot find LINK/SSBOND residue ZN (101 ) 
    35239 Cannot find LINK/SSBOND residue ZN (101 ) 
    35240 Cannot find LINK/SSBOND residue ZN (101 ) 
    35241  
    35242 Chain information for d9_J92_cl9 #7 
    35243 --- 
    35244 Chain | Description 
    35245 3 | No description available 
    35246 Y | No description available 
    35247 Z | No description available 
    35248 a | No description available 
    35249 b | No description available 
    35250 c | No description available 
    35251 e | No description available 
    35252 l | No description available 
    35253 v | No description available 
    35254  
    35255 
    35256 > rename #6 d9-PTC-models
    35257 
    35258 > open
    35259 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_refine3d_job086_APE_0.7Apix.mrc
    35260 > id 10.1 name d10_ape
    35261 
    35262 Opened d10_ape as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    35263 0.0256, step 2, values float32 
    35264 
    35265 > open
    35266 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_refine3d_job085_PE_0.7Apix.mrc
    35267 > id 10.2 name d10_pe
    35268 
    35269 Opened d10_pe as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    35270 0.0264, step 2, values float32 
    35271 
    35272 > open
    35273 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_refine3d_job084_E_0.7Apix.mrc
    35274 > id 10.3 name d10_e
    35275 
    35276 Opened d10_e as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    35277 0.024, step 2, values float32 
    35278 
    35279 > rename #10 d10
    35280 
    35281 > open
    35282 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_localres_job095_classAPE_0.7Apix.mrc
    35283 > id 11.1 name d10_ape
    35284 
    35285 Opened d10_ape as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    35286 0.0779, step 2, values float32 
    35287 
    35288 > open
    35289 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_localres_job094_classPE_0.7Apix.mrc
    35290 > id 11.2 name d10_pe
    35291 
    35292 Opened d10_pe as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    35293 0.0807, step 2, values float32 
    35294 
    35295 > open
    35296 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_localres_job093_classE_0.7Apix.mrc
    35297 > id 11.3 name d10_e
    35298 
    35299 Opened d10_e as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at level
    35300 0.0701, step 2, values float32 
    35301 
    35302 > rename #11 d10-sharp
    35303 
    35304 > open
    35305 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_NU_J53_PTCclass0_0.7Apix.mrc
    35306 > id 12.10 name d10_J53_c0
    35307 
    35308 Opened d10_J53_c0 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35309 level 0.789, step 2, values float32 
    35310 
    35311 > open
    35312 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_NU_J54_PTCclass1_0.7Apix.mrc
    35313 > id 12.1 name d10_J54_c1
    35314 
    35315 Opened d10_J54_c1 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35316 level 0.796, step 2, values float32 
    35317 
    35318 > open
    35319 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_NU_J55_PTCclass2_0.7Apix.mrc
    35320 > id 12.2 name d10_J55_c2
    35321 
    35322 Opened d10_J55_c2 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35323 level 0.79, step 2, values float32 
    35324 
    35325 > open
    35326 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_NU_J56_PTCclass3_0.7Apix.mrc
    35327 > id 12.3 name d10_J56_c3
    35328 
    35329 Opened d10_J56_c3 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35330 level 0.797, step 2, values float32 
    35331 
    35332 > open
    35333 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_NU_J57_PTCclass4_0.7Apix.mrc
    35334 > id 12.4 name d10_J57_c4
    35335 
    35336 Opened d10_J57_c4 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35337 level 0.791, step 2, values float32 
    35338 
    35339 > open
    35340 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_NU_J58_PTCclass5_0.7Apix.mrc
    35341 > id 12.5 name d10_J58_c5
    35342 
    35343 Opened d10_J58_c5 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35344 level 0.791, step 2, values float32 
    35345 
    35346 > open
    35347 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_NU_J59_PTCclass6_0.7Apix.mrc
    35348 > id 12.6 name d10_J59_c6
    35349 
    35350 Opened d10_J59_c6 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35351 level 0.8, step 2, values float32 
    35352 
    35353 > open
    35354 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_NU_J60_PTCclass7_0.7Apix.mrc
    35355 > id 12.7 name d10_J60_c7
    35356 
    35357 Opened d10_J60_c7 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35358 level 0.799, step 2, values float32 
    35359 
    35360 > open
    35361 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_NU_J61_PTCclass8_0.7Apix.mrc
    35362 > id 12.8 name d10_J61_c8
    35363 
    35364 Opened d10_J61_c8 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35365 level 0.791, step 2, values float32 
    35366 
    35367 > open
    35368 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_NU_J62_PTCclass9_0.7Apix.mrc
    35369 > id 12.9 name d10_J62_c9
    35370 
    35371 Opened d10_J62_c9 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35372 level 0.795, step 2, values float32 
    35373 
    35374 > rename #12 d10-PTC
    35375 
    35376 > open
    35377 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_LF_J96_PTCclass0_0.7Apix.mrc
    35378 > id 13.10 name d10_J53_c0
    35379 
    35380 Opened d10_J53_c0 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35381 level 1.19, step 2, values float32 
    35382 
    35383 > open
    35384 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_LF_J97_PTCclass1_0.7Apix.mrc
    35385 > id 13.1 name d10_J54_c1
    35386 
    35387 Opened d10_J54_c1 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35388 level 1.21, step 2, values float32 
    35389 
    35390 > open
    35391 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_LF_J98_PTCclass2_0.7Apix.mrc
    35392 > id 13.2 name d10_J55_c2
    35393 
    35394 Opened d10_J55_c2 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35395 level 1.2, step 2, values float32 
    35396 
    35397 > open
    35398 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_LF_J99_PTCclass3_0.7Apix.mrc
    35399 > id 13.3 name d10_J56_c3
    35400 
    35401 Opened d10_J56_c3 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35402 level 1.23, step 2, values float32 
    35403 
    35404 > open
    35405 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_LF_J100_PTCclass4_0.7Apix.mrc
    35406 > id 13.4 name d10_J57_c4
    35407 
    35408 Opened d10_J57_c4 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35409 level 1.2, step 2, values float32 
    35410 
    35411 > open
    35412 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_LF_J101_PTCclass5_0.7Apix.mrc
    35413 > id 13.5 name d10_J58_c5
    35414 
    35415 Opened d10_J58_c5 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35416 level 1.21, step 2, values float32 
    35417 
    35418 > open
    35419 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_LF_J102_PTCclass6_0.7Apix.mrc
    35420 > id 13.6 name d10_J59_c6
    35421 
    35422 Opened d10_J59_c6 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35423 level 1.23, step 2, values float32 
    35424 
    35425 > open
    35426 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_LF_J103_PTCclass7_0.7Apix.mrc
    35427 > id 13.7 name d10_J60_c7
    35428 
    35429 Opened d10_J60_c7 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35430 level 1.24, step 2, values float32 
    35431 
    35432 > open
    35433 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_LF_J104_PTCclass8_0.7Apix.mrc
    35434 > id 13.8 name d10_J61_c8
    35435 
    35436 Opened d10_J61_c8 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35437 level 1.21, step 2, values float32 
    35438 
    35439 > open
    35440 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/delta10_LF_J105_PTCclass9_0.7Apix.mrc
    35441 > id 13.9 name d10_J62_c9
    35442 
    35443 Opened d10_J62_c9 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35444 level 1.23, step 2, values float32 
    35445 
    35446 > rename #13 d10-PTC-sharp
    35447 
    35448 > open
    35449 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J53-coot-5.pdb
    35450 > id 14.10 name d10_J53_c0
    35451 
    35452 Summary of feedback from opening
    35453 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J53-coot-5.pdb 
    35454 --- 
    35455 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    35456 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    35457 6 
    35458 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    35459 8 
    35460 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    35461 23 
    35462 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    35463 13 
    35464 320 messages similar to the above omitted 
    35465 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    35466 -1 N LEU l 102 O LEU l 33 
    35467 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    35468 0 
    35469 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    35470 -1 N LYS l 133 O SER l 30 
    35471 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    35472 0 
    35473 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    35474 115 -1 N ILE m 113 O ILE m 34 
    35475 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    35476 103 -1 N CYS m 100 O MET m 110 
    35477 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    35478 0 
    35479 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    35480 -1 N VAL n 39 O VAL n 49 
    35481 55 messages similar to the above omitted 
    35482 Cannot find LINK/SSBOND residue ZN (101 ) 
    35483 Cannot find LINK/SSBOND residue ZN (101 ) 
    35484 Cannot find LINK/SSBOND residue ZN (101 ) 
    35485 Cannot find LINK/SSBOND residue ZN (101 ) 
    35486  
    35487 Chain information for d10_J53_c0 #7 
    35488 --- 
    35489 Chain | Description 
    35490 3 | No description available 
    35491 a | No description available 
    35492 b | No description available 
    35493 c | No description available 
    35494 e | No description available 
    35495 l | No description available 
    35496  
    35497 
    35498 > open
    35499 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J54-coot-5.pdb
    35500 > id 14.1 name d10_J54_c1
    35501 
    35502 Summary of feedback from opening
    35503 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J54-coot-5.pdb 
    35504 --- 
    35505 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    35506 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    35507 6 
    35508 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    35509 8 
    35510 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    35511 23 
    35512 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    35513 13 
    35514 320 messages similar to the above omitted 
    35515 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    35516 -1 N LEU l 102 O LEU l 33 
    35517 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    35518 0 
    35519 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    35520 -1 N LYS l 133 O SER l 30 
    35521 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    35522 0 
    35523 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    35524 115 -1 N ILE m 113 O ILE m 34 
    35525 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    35526 103 -1 N CYS m 100 O MET m 110 
    35527 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    35528 0 
    35529 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    35530 -1 N VAL n 39 O VAL n 49 
    35531 55 messages similar to the above omitted 
    35532 Cannot find LINK/SSBOND residue ZN (101 ) 
    35533 Cannot find LINK/SSBOND residue ZN (101 ) 
    35534 Cannot find LINK/SSBOND residue ZN (101 ) 
    35535 Cannot find LINK/SSBOND residue ZN (101 ) 
    35536  
    35537 Chain information for d10_J54_c1 #7 
    35538 --- 
    35539 Chain | Description 
    35540 3 | No description available 
    35541 a | No description available 
    35542 b | No description available 
    35543 c | No description available 
    35544 e | No description available 
    35545 l | No description available 
    35546  
    35547 
    35548 > open
    35549 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J55-coot-5.pdb
    35550 > id 14.2 name d10_J55_c2
    35551 
    35552 Summary of feedback from opening
    35553 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J55-coot-5.pdb 
    35554 --- 
    35555 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    35556 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    35557 6 
    35558 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    35559 8 
    35560 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    35561 23 
    35562 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    35563 13 
    35564 320 messages similar to the above omitted 
    35565 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    35566 -1 N LEU l 102 O LEU l 33 
    35567 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    35568 0 
    35569 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    35570 -1 N LYS l 133 O SER l 30 
    35571 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    35572 0 
    35573 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    35574 115 -1 N ILE m 113 O ILE m 34 
    35575 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    35576 103 -1 N CYS m 100 O MET m 110 
    35577 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    35578 0 
    35579 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    35580 -1 N VAL n 39 O VAL n 49 
    35581 55 messages similar to the above omitted 
    35582 Cannot find LINK/SSBOND residue ZN (101 ) 
    35583 Cannot find LINK/SSBOND residue ZN (101 ) 
    35584 Cannot find LINK/SSBOND residue ZN (101 ) 
    35585 Cannot find LINK/SSBOND residue ZN (101 ) 
    35586  
    35587 Chain information for d10_J55_c2 #7 
    35588 --- 
    35589 Chain | Description 
    35590 3 | No description available 
    35591 a | No description available 
    35592 b | No description available 
    35593 c | No description available 
    35594 e | No description available 
    35595 l | No description available 
    35596 v | No description available 
    35597  
    35598 
    35599 > open
    35600 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J56-coot-5.pdb
    35601 > id 14.3 name d10_J56_c3
    35602 
    35603 Summary of feedback from opening
    35604 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J56-coot-5.pdb 
    35605 --- 
    35606 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    35607 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    35608 6 
    35609 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    35610 8 
    35611 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    35612 23 
    35613 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    35614 13 
    35615 320 messages similar to the above omitted 
    35616 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    35617 -1 N LEU l 102 O LEU l 33 
    35618 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    35619 0 
    35620 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    35621 -1 N LYS l 133 O SER l 30 
    35622 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    35623 0 
    35624 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    35625 115 -1 N ILE m 113 O ILE m 34 
    35626 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    35627 103 -1 N CYS m 100 O MET m 110 
    35628 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    35629 0 
    35630 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    35631 -1 N VAL n 39 O VAL n 49 
    35632 55 messages similar to the above omitted 
    35633 Cannot find LINK/SSBOND residue ZN (101 ) 
    35634 Cannot find LINK/SSBOND residue ZN (101 ) 
    35635 Cannot find LINK/SSBOND residue ZN (101 ) 
    35636 Cannot find LINK/SSBOND residue ZN (101 ) 
    35637  
    35638 Chain information for d10_J56_c3 #7 
    35639 --- 
    35640 Chain | Description 
    35641 3 | No description available 
    35642 Y | No description available 
    35643 Z | No description available 
    35644 a | No description available 
    35645 b | No description available 
    35646 c | No description available 
    35647 e | No description available 
    35648 l | No description available 
    35649 v | No description available 
    35650  
    35651 
    35652 > open
    35653 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J57-coot-5.pdb
    35654 > id 14.4 name d10_J57_c4
    35655 
    35656 Summary of feedback from opening
    35657 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J57-coot-5.pdb 
    35658 --- 
    35659 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    35660 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    35661 6 
    35662 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    35663 8 
    35664 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    35665 23 
    35666 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    35667 13 
    35668 320 messages similar to the above omitted 
    35669 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    35670 -1 N LEU l 102 O LEU l 33 
    35671 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    35672 0 
    35673 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    35674 -1 N LYS l 133 O SER l 30 
    35675 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    35676 0 
    35677 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    35678 115 -1 N ILE m 113 O ILE m 34 
    35679 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    35680 103 -1 N CYS m 100 O MET m 110 
    35681 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    35682 0 
    35683 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    35684 -1 N VAL n 39 O VAL n 49 
    35685 55 messages similar to the above omitted 
    35686 Cannot find LINK/SSBOND residue ZN (101 ) 
    35687 Cannot find LINK/SSBOND residue ZN (101 ) 
    35688 Cannot find LINK/SSBOND residue ZN (101 ) 
    35689 Cannot find LINK/SSBOND residue ZN (101 ) 
    35690  
    35691 Chain information for d10_J57_c4 #7 
    35692 --- 
    35693 Chain | Description 
    35694 3 | No description available 
    35695 a | No description available 
    35696 b | No description available 
    35697 c | No description available 
    35698 e | No description available 
    35699 l | No description available 
    35700 v | No description available 
    35701  
    35702 
    35703 > open
    35704 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J58-coot-5.pdb
    35705 > id 14.5 name d10_J58_c5
    35706 
    35707 Summary of feedback from opening
    35708 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J58-coot-5.pdb 
    35709 --- 
    35710 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    35711 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    35712 6 
    35713 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    35714 8 
    35715 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    35716 23 
    35717 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    35718 13 
    35719 320 messages similar to the above omitted 
    35720 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    35721 -1 N LEU l 102 O LEU l 33 
    35722 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    35723 0 
    35724 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    35725 -1 N LYS l 133 O SER l 30 
    35726 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    35727 0 
    35728 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    35729 115 -1 N ILE m 113 O ILE m 34 
    35730 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    35731 103 -1 N CYS m 100 O MET m 110 
    35732 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    35733 0 
    35734 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    35735 -1 N VAL n 39 O VAL n 49 
    35736 55 messages similar to the above omitted 
    35737 Cannot find LINK/SSBOND residue ZN (101 ) 
    35738 Cannot find LINK/SSBOND residue ZN (101 ) 
    35739 Cannot find LINK/SSBOND residue ZN (101 ) 
    35740 Cannot find LINK/SSBOND residue ZN (101 ) 
    35741  
    35742 Chain information for d10_J58_c5 #7 
    35743 --- 
    35744 Chain | Description 
    35745 3 | No description available 
    35746 Z | No description available 
    35747 a | No description available 
    35748 b | No description available 
    35749 c | No description available 
    35750 e | No description available 
    35751 l | No description available 
    35752 v | No description available 
    35753  
    35754 
    35755 > open
    35756 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J59-coot-5.pdb
    35757 > id 14.6 name d10_J59_c6
    35758 
    35759 Summary of feedback from opening
    35760 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J59-coot-5.pdb 
    35761 --- 
    35762 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    35763 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    35764 6 
    35765 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    35766 8 
    35767 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    35768 23 
    35769 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    35770 13 
    35771 320 messages similar to the above omitted 
    35772 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    35773 -1 N LEU l 102 O LEU l 33 
    35774 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    35775 0 
    35776 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    35777 -1 N LYS l 133 O SER l 30 
    35778 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    35779 0 
    35780 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    35781 115 -1 N ILE m 113 O ILE m 34 
    35782 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    35783 103 -1 N CYS m 100 O MET m 110 
    35784 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    35785 0 
    35786 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    35787 -1 N VAL n 39 O VAL n 49 
    35788 55 messages similar to the above omitted 
    35789 Cannot find LINK/SSBOND residue ZN (101 ) 
    35790 Cannot find LINK/SSBOND residue ZN (101 ) 
    35791 Cannot find LINK/SSBOND residue ZN (101 ) 
    35792 Cannot find LINK/SSBOND residue ZN (101 ) 
    35793  
    35794 Chain information for d10_J59_c6 #7 
    35795 --- 
    35796 Chain | Description 
    35797 3 | No description available 
    35798 Z | No description available 
    35799 a | No description available 
    35800 b | No description available 
    35801 c | No description available 
    35802 e | No description available 
    35803 l | No description available 
    35804 v | No description available 
    35805  
    35806 
    35807 > open
    35808 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J60-coot-5.pdb
    35809 > id 14.7 name d10_J60_c7
    35810 
    35811 Summary of feedback from opening
    35812 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J60-coot-5.pdb 
    35813 --- 
    35814 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    35815 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    35816 6 
    35817 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    35818 8 
    35819 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    35820 23 
    35821 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    35822 13 
    35823 320 messages similar to the above omitted 
    35824 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    35825 -1 N LEU l 102 O LEU l 33 
    35826 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    35827 0 
    35828 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    35829 -1 N LYS l 133 O SER l 30 
    35830 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    35831 0 
    35832 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    35833 115 -1 N ILE m 113 O ILE m 34 
    35834 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    35835 103 -1 N CYS m 100 O MET m 110 
    35836 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    35837 0 
    35838 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    35839 -1 N VAL n 39 O VAL n 49 
    35840 55 messages similar to the above omitted 
    35841 Cannot find LINK/SSBOND residue ZN (101 ) 
    35842 Cannot find LINK/SSBOND residue ZN (101 ) 
    35843 Cannot find LINK/SSBOND residue ZN (101 ) 
    35844 Cannot find LINK/SSBOND residue ZN (101 ) 
    35845  
    35846 Chain information for d10_J60_c7 #7 
    35847 --- 
    35848 Chain | Description 
    35849 3 | No description available 
    35850 Z | No description available 
    35851 a | No description available 
    35852 b | No description available 
    35853 c | No description available 
    35854 e | No description available 
    35855 l | No description available 
    35856  
    35857 
    35858 > open
    35859 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J61-coot-5.pdb
    35860 > id 14.8 name d10_J61_c8
    35861 
    35862 Summary of feedback from opening
    35863 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J61-coot-5.pdb 
    35864 --- 
    35865 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    35866 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    35867 6 
    35868 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    35869 8 
    35870 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    35871 23 
    35872 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    35873 13 
    35874 320 messages similar to the above omitted 
    35875 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    35876 -1 N LEU l 102 O LEU l 33 
    35877 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    35878 0 
    35879 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    35880 -1 N LYS l 133 O SER l 30 
    35881 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    35882 0 
    35883 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    35884 115 -1 N ILE m 113 O ILE m 34 
    35885 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    35886 103 -1 N CYS m 100 O MET m 110 
    35887 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    35888 0 
    35889 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    35890 -1 N VAL n 39 O VAL n 49 
    35891 55 messages similar to the above omitted 
    35892 Cannot find LINK/SSBOND residue ZN (101 ) 
    35893 Cannot find LINK/SSBOND residue ZN (101 ) 
    35894 Cannot find LINK/SSBOND residue ZN (101 ) 
    35895 Cannot find LINK/SSBOND residue ZN (101 ) 
    35896  
    35897 Chain information for d10_J61_c8 #7 
    35898 --- 
    35899 Chain | Description 
    35900 3 | No description available 
    35901 Z | No description available 
    35902 a | No description available 
    35903 b | No description available 
    35904 c | No description available 
    35905 e | No description available 
    35906 l | No description available 
    35907 v | No description available 
    35908  
    35909 
    35910 > open
    35911 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J62-coot-5.pdb
    35912 > id 14.9 name d10_J62_c9
    35913 
    35914 Summary of feedback from opening
    35915 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J62-coot-5.pdb 
    35916 --- 
    35917 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    35918 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    35919 6 
    35920 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    35921 8 
    35922 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    35923 23 
    35924 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    35925 13 
    35926 320 messages similar to the above omitted 
    35927 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    35928 -1 N LEU l 102 O LEU l 33 
    35929 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    35930 0 
    35931 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    35932 -1 N LYS l 133 O SER l 30 
    35933 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    35934 0 
    35935 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    35936 115 -1 N ILE m 113 O ILE m 34 
    35937 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    35938 103 -1 N CYS m 100 O MET m 110 
    35939 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    35940 0 
    35941 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    35942 -1 N VAL n 39 O VAL n 49 
    35943 55 messages similar to the above omitted 
    35944 Cannot find LINK/SSBOND residue ZN (101 ) 
    35945 Cannot find LINK/SSBOND residue ZN (101 ) 
    35946 Cannot find LINK/SSBOND residue ZN (101 ) 
    35947 Cannot find LINK/SSBOND residue ZN (101 ) 
    35948  
    35949 Chain information for d10_J62_c9 #7 
    35950 --- 
    35951 Chain | Description 
    35952 3 | No description available 
    35953 Y | No description available 
    35954 Z | No description available 
    35955 a | No description available 
    35956 b | No description available 
    35957 c | No description available 
    35958 e | No description available 
    35959 l | No description available 
    35960 v | No description available 
    35961  
    35962 
    35963 > rename #14 d10-PTC-models
    35964 
    35965 > open
    35966 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_HOMO_J111_APE_0.7Apix.mrc
    35967 > id 20.1 name dE_J111_ape
    35968 
    35969 Opened dE_J111_ape as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35970 level 0.378, step 2, values float32 
    35971 
    35972 > open
    35973 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_HOMO_J112_AP_0.7Apix.mrc
    35974 > id 20.2 name dE_J112_ap
    35975 
    35976 Opened dE_J112_ap as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35977 level 0.353, step 2, values float32 
    35978 
    35979 > open
    35980 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_HOMO_J113_PE_0.7Apix.mrc
    35981 > id 20.3 name dE_J113_pe
    35982 
    35983 Opened dE_J113_pe as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35984 level 0.396, step 2, values float32 
    35985 
    35986 > open
    35987 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_HOMO_J124_E_0.7Apix.mrc
    35988 > id 20.4 name dE_J124_e
    35989 
    35990 Opened dE_J124_e as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    35991 level 0.336, step 2, values float32 
    35992 
    35993 > rename #20 dE
    35994 
    35995 > open
    35996 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_SHARP_J111_APE_0.7Apix.mrc
    35997 > id 21.1 name dE_J111_ape
    35998 
    35999 Opened dE_J111_ape as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    36000 level 0.565, step 2, values float32 
    36001 
    36002 > open
    36003 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_SHARP_J112_AP_0.7Apix.mrc
    36004 > id 21.2 name dE_J112_ap
    36005 
    36006 Opened dE_J112_ap as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    36007 level 0.452, step 2, values float32 
    36008 
    36009 > open
    36010 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_SHARP_J113_PE_0.7Apix.mrc
    36011 > id 21.3 name dE_J113_pe
    36012 
    36013 Opened dE_J113_pe as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    36014 level 0.593, step 2, values float32 
    36015 
    36016 > open
    36017 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_SHARP_J124_E_0.7Apix.mrc
    36018 > id 21.4 name dE_J124_e
    36019 
    36020 Opened dE_J124_e as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    36021 level 0.436, step 2, values float32 
    36022 
    36023 > rename #21 dE-sharp
    36024 
    36025 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj111-APE-PTC-
    36026 > coot-2.pdb id 22.1 name dE_J111_ape
    36027 
    36028 Summary of feedback from opening
    36029 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj111-APE-PTC-coot-2.pdb 
    36030 --- 
    36031 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    36032 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    36033 6 
    36034 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    36035 8 
    36036 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    36037 23 
    36038 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    36039 13 
    36040 135 messages similar to the above omitted 
    36041 End residue of secondary structure not found: HELIX 141 141 THR l 42 LYS l 58
    36042 1 17 
    36043 Start residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l
    36044 125 1 17 
    36045 Start residue of secondary structure not found: HELIX 143 143 ASN m 13 GLU m
    36046 32 1 20 
    36047 Start residue of secondary structure not found: HELIX 144 144 LEU m 38 ASP m
    36048 58 1 21 
    36049 Start residue of secondary structure not found: HELIX 145 145 SER m 59 ARG m
    36050 71 1 13 
    36051 Start residue of secondary structure not found: HELIX 146 146 ASP m 72 ALA m
    36052 88 1 17 
    36053 Start residue of secondary structure not found: HELIX 147 147 ASP n 2 GLY n 22
    36054 1 21 
    36055 178 messages similar to the above omitted 
    36056 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    36057 -1 N LEU l 102 O LEU l 33 
    36058 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    36059 0 
    36060 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    36061 -1 N LYS l 133 O SER l 30 
    36062 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    36063 0 
    36064 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    36065 115 -1 N ILE m 113 O ILE m 34 
    36066 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    36067 103 -1 N CYS m 100 O MET m 110 
    36068 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    36069 0 
    36070 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    36071 -1 N VAL n 39 O VAL n 49 
    36072 55 messages similar to the above omitted 
    36073 Cannot find LINK/SSBOND residue ZN (101 ) 
    36074 Cannot find LINK/SSBOND residue ZN (101 ) 
    36075 Cannot find LINK/SSBOND residue ZN (101 ) 
    36076 Cannot find LINK/SSBOND residue ZN (101 ) 
    36077  
    36078 Chain information for dE_J111_ape #7 
    36079 --- 
    36080 Chain | Description 
    36081 3 | No description available 
    36082 Y | No description available 
    36083 Z | No description available 
    36084 a | No description available 
    36085 b | No description available 
    36086 c | No description available 
    36087 e | No description available 
    36088 l | No description available 
    36089 v | No description available 
    36090  
    36091 
    36092 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj112-AP-PTC-
    36093 > coot-2.pdb id 22.2 name dE_J112_ap
    36094 
    36095 Summary of feedback from opening
    36096 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj112-AP-PTC-coot-2.pdb 
    36097 --- 
    36098 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    36099 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    36100 6 
    36101 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    36102 8 
    36103 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    36104 23 
    36105 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    36106 13 
    36107 135 messages similar to the above omitted 
    36108 End residue of secondary structure not found: HELIX 141 141 THR l 42 LYS l 58
    36109 1 17 
    36110 Start residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l
    36111 125 1 17 
    36112 Start residue of secondary structure not found: HELIX 143 143 ASN m 13 GLU m
    36113 32 1 20 
    36114 Start residue of secondary structure not found: HELIX 144 144 LEU m 38 ASP m
    36115 58 1 21 
    36116 Start residue of secondary structure not found: HELIX 145 145 SER m 59 ARG m
    36117 71 1 13 
    36118 Start residue of secondary structure not found: HELIX 146 146 ASP m 72 ALA m
    36119 88 1 17 
    36120 Start residue of secondary structure not found: HELIX 147 147 ASP n 2 GLY n 22
    36121 1 21 
    36122 178 messages similar to the above omitted 
    36123 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    36124 -1 N LEU l 102 O LEU l 33 
    36125 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    36126 0 
    36127 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    36128 -1 N LYS l 133 O SER l 30 
    36129 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    36130 0 
    36131 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    36132 115 -1 N ILE m 113 O ILE m 34 
    36133 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    36134 103 -1 N CYS m 100 O MET m 110 
    36135 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    36136 0 
    36137 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    36138 -1 N VAL n 39 O VAL n 49 
    36139 55 messages similar to the above omitted 
    36140 Cannot find LINK/SSBOND residue ZN (101 ) 
    36141 Cannot find LINK/SSBOND residue ZN (101 ) 
    36142 Cannot find LINK/SSBOND residue ZN (101 ) 
    36143 Cannot find LINK/SSBOND residue ZN (101 ) 
    36144  
    36145 Chain information for dE_J112_ap #7 
    36146 --- 
    36147 Chain | Description 
    36148 3 | No description available 
    36149 Y | No description available 
    36150 Z | No description available 
    36151 a | No description available 
    36152 b | No description available 
    36153 c | No description available 
    36154 e | No description available 
    36155 l | No description available 
    36156 v | No description available 
    36157  
    36158 
    36159 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj113-PE-PTC-
    36160 > coot-1.pdb id 22.3 name dE_J113_pe
    36161 
    36162 Summary of feedback from opening
    36163 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj113-PE-PTC-coot-1.pdb 
    36164 --- 
    36165 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    36166 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    36167 6 
    36168 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    36169 8 
    36170 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    36171 23 
    36172 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    36173 13 
    36174 135 messages similar to the above omitted 
    36175 End residue of secondary structure not found: HELIX 141 141 THR l 42 LYS l 58
    36176 1 17 
    36177 Start residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l
    36178 125 1 17 
    36179 Start residue of secondary structure not found: HELIX 143 143 ASN m 13 GLU m
    36180 32 1 20 
    36181 Start residue of secondary structure not found: HELIX 144 144 LEU m 38 ASP m
    36182 58 1 21 
    36183 Start residue of secondary structure not found: HELIX 145 145 SER m 59 ARG m
    36184 71 1 13 
    36185 Start residue of secondary structure not found: HELIX 146 146 ASP m 72 ALA m
    36186 88 1 17 
    36187 Start residue of secondary structure not found: HELIX 147 147 ASP n 2 GLY n 22
    36188 1 21 
    36189 178 messages similar to the above omitted 
    36190 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    36191 -1 N LEU l 102 O LEU l 33 
    36192 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    36193 0 
    36194 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    36195 -1 N LYS l 133 O SER l 30 
    36196 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    36197 0 
    36198 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    36199 115 -1 N ILE m 113 O ILE m 34 
    36200 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    36201 103 -1 N CYS m 100 O MET m 110 
    36202 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    36203 0 
    36204 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    36205 -1 N VAL n 39 O VAL n 49 
    36206 55 messages similar to the above omitted 
    36207 Cannot find LINK/SSBOND residue ZN (101 ) 
    36208 Cannot find LINK/SSBOND residue ZN (101 ) 
    36209 Cannot find LINK/SSBOND residue ZN (101 ) 
    36210 Cannot find LINK/SSBOND residue ZN (101 ) 
    36211  
    36212 Chain information for dE_J113_pe #7 
    36213 --- 
    36214 Chain | Description 
    36215 3 | No description available 
    36216 Z | No description available 
    36217 a | No description available 
    36218 b | No description available 
    36219 c | No description available 
    36220 e | No description available 
    36221 l | No description available 
    36222 v | No description available 
    36223  
    36224 
    36225 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj124-E-PTC-
    36226 > coot-1.pdb id 22.4 name dE_J124_e
    36227 
    36228 Summary of feedback from opening
    36229 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj124-E-PTC-coot-1.pdb 
    36230 --- 
    36231 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    36232 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    36233 6 
    36234 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    36235 8 
    36236 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    36237 23 
    36238 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    36239 13 
    36240 135 messages similar to the above omitted 
    36241 End residue of secondary structure not found: HELIX 141 141 THR l 42 LYS l 58
    36242 1 17 
    36243 Start residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l
    36244 125 1 17 
    36245 Start residue of secondary structure not found: HELIX 143 143 ASN m 13 GLU m
    36246 32 1 20 
    36247 Start residue of secondary structure not found: HELIX 144 144 LEU m 38 ASP m
    36248 58 1 21 
    36249 Start residue of secondary structure not found: HELIX 145 145 SER m 59 ARG m
    36250 71 1 13 
    36251 Start residue of secondary structure not found: HELIX 146 146 ASP m 72 ALA m
    36252 88 1 17 
    36253 Start residue of secondary structure not found: HELIX 147 147 ASP n 2 GLY n 22
    36254 1 21 
    36255 178 messages similar to the above omitted 
    36256 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    36257 -1 N LEU l 102 O LEU l 33 
    36258 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    36259 0 
    36260 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    36261 -1 N LYS l 133 O SER l 30 
    36262 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    36263 0 
    36264 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    36265 115 -1 N ILE m 113 O ILE m 34 
    36266 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    36267 103 -1 N CYS m 100 O MET m 110 
    36268 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    36269 0 
    36270 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    36271 -1 N VAL n 39 O VAL n 49 
    36272 55 messages similar to the above omitted 
    36273 Cannot find LINK/SSBOND residue ZN (101 ) 
    36274 Cannot find LINK/SSBOND residue ZN (101 ) 
    36275 Cannot find LINK/SSBOND residue ZN (101 ) 
    36276 Cannot find LINK/SSBOND residue ZN (101 ) 
    36277  
    36278 Chain information for dE_J124_e #7 
    36279 --- 
    36280 Chain | Description 
    36281 3 | No description available 
    36282 a | No description available 
    36283 b | No description available 
    36284 c | No description available 
    36285 e | No description available 
    36286 l | No description available 
    36287 v | No description available 
    36288  
    36289 
    36290 > rename #22 dE-models
    36291 
    36292 > open
    36293 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_NU_J239_PTCclass0_0.7Apix.mrc
    36294 > id 23.10 name dE_J239_c0
    36295 
    36296 Opened dE_J239_c0 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    36297 level 0.131, step 2, values float32 
    36298 
    36299 > open
    36300 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_NU_J240_PTCclass1_0.7Apix.mrc
    36301 > id 23.1 name dE_J240_c1
    36302 
    36303 Opened dE_J240_c1 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    36304 level 0.139, step 2, values float32 
    36305 
    36306 > open
    36307 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_NU_J241_PTCclass2_0.7Apix.mrc
    36308 > id 23.2 name dE_J241_c2
    36309 
    36310 Opened dE_J241_c2 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    36311 level 0.14, step 2, values float32 
    36312 
    36313 > open
    36314 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_NU_J242_PTCclass3_0.7Apix.mrc
    36315 > id 23.3 name dE_J242_c3
    36316 
    36317 Opened dE_J242_c3 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    36318 level 0.101, step 2, values float32 
    36319 
    36320 > open
    36321 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_NU_J243_PTCclass4_0.7Apix.mrc
    36322 > id 23.4 name dE_J243_c4
    36323 
    36324 Opened dE_J243_c4 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    36325 level 0.139, step 2, values float32 
    36326 
    36327 > open
    36328 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_NU_J244_PTCclass5_0.7Apix.mrc
    36329 > id 23.5 name dE_J244_c5
    36330 
    36331 Opened dE_J244_c5 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    36332 level 0.139, step 2, values float32 
    36333 
    36334 > open
    36335 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_NU_J245_PTCclass6_0.7Apix.mrc
    36336 > id 23.6 name dE_J245_c6
    36337 
    36338 Opened dE_J245_c6 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    36339 level 0.141, step 2, values float32 
    36340 
    36341 > open
    36342 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_NU_J246_PTCclass7_0.7Apix.mrc
    36343 > id 23.7 name dE_J246_c7
    36344 
    36345 Opened dE_J246_c7 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    36346 level 0.139, step 2, values float32 
    36347 
    36348 > open
    36349 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_NU_J247_PTCclass8_0.7Apix.mrc
    36350 > id 23.8 name dE_J247_c8
    36351 
    36352 Opened dE_J247_c8 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    36353 level 0.139, step 2, values float32 
    36354 
    36355 > open
    36356 > /Users/dalar193/wd/deltaRibosomes/aligned_maps_7k00scale/deltaE_NU_J248_PTCclass9_0.7Apix.mrc
    36357 > id 23.9 name dE_J248_c9
    36358 
    36359 Opened dE_J248_c9 as #7, grid size 391,421,391, pixel 0.7,0.7,0.7, shown at
    36360 level 0.141, step 2, values float32 
    36361 
    36362 > rename #23 dE-PTC
    36363 
    36364 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36365 > PTC/dEJ239-coot-1.pdb id 25.10 name dE_J239_c0
    36366 
    36367 No such file/path: /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36368 PTC/dEJ239-coot-1.pdb 
    36369 
    36370 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36371 > PTC/dEJ240-coot-1.pdb id 25.1 name dE_J240_c1
    36372 
    36373 No such file/path: /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36374 PTC/dEJ240-coot-1.pdb 
    36375 
    36376 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36377 > PTC/dEJ241-coot-1.pdb id 25.2 name dE_J241_c2
    36378 
    36379 No such file/path: /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36380 PTC/dEJ241-coot-1.pdb 
    36381 
    36382 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36383 > PTC/dEJ242-coot-1.pdb id 25.3 name dE_J242_c3
    36384 
    36385 No such file/path: /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36386 PTC/dEJ242-coot-1.pdb 
    36387 
    36388 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36389 > PTC/dEJ243-coot-1.pdb id 25.4 name dE_J243_c4
    36390 
    36391 No such file/path: /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36392 PTC/dEJ243-coot-1.pdb 
    36393 
    36394 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36395 > PTC/dEJ244-coot-1.pdb id 25.5 name dE_J244_c5
    36396 
    36397 No such file/path: /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36398 PTC/dEJ244-coot-1.pdb 
    36399 
    36400 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36401 > PTC/dEJ245-coot-1.pdb id 25.6 name dE_J245_c6
    36402 
    36403 No such file/path: /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36404 PTC/dEJ245-coot-1.pdb 
    36405 
    36406 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36407 > PTC/dEJ246-coot-1.pdb id 25.7 name dE_J246_c7
    36408 
    36409 No such file/path: /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36410 PTC/dEJ246-coot-1.pdb 
    36411 
    36412 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36413 > PTC/dEJ247-coot-1.pdb id 25.8 name dE_J247_c8
    36414 
    36415 No such file/path: /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36416 PTC/dEJ247-coot-1.pdb 
    36417 
    36418 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36419 > PTC/dEJ248-coot-1.pdb id 25.9 name dE_J248_c9
    36420 
    36421 No such file/path: /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36422 PTC/dEJ248-coot-1.pdb 
    36423 
    36424 > rename #25 dE-PTC-models
    36425 
    36426 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36427 > PTC/dEc0-J239-coot-1.pdb id 25.10 name dE_J239_c0
    36428 
    36429 Summary of feedback from opening
    36430 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc0-J239-coot-1.pdb 
    36431 --- 
    36432 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    36433 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    36434 6 
    36435 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    36436 8 
    36437 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    36438 23 
    36439 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    36440 13 
    36441 320 messages similar to the above omitted 
    36442 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    36443 -1 N LEU l 102 O LEU l 33 
    36444 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    36445 0 
    36446 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    36447 -1 N LYS l 133 O SER l 30 
    36448 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    36449 0 
    36450 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    36451 115 -1 N ILE m 113 O ILE m 34 
    36452 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    36453 103 -1 N CYS m 100 O MET m 110 
    36454 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    36455 0 
    36456 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    36457 -1 N VAL n 39 O VAL n 49 
    36458 55 messages similar to the above omitted 
    36459 Cannot find LINK/SSBOND residue ZN (101 ) 
    36460 Cannot find LINK/SSBOND residue ZN (101 ) 
    36461 Cannot find LINK/SSBOND residue ZN (101 ) 
    36462 Cannot find LINK/SSBOND residue ZN (101 ) 
    36463  
    36464 Chain information for dE_J239_c0 #7 
    36465 --- 
    36466 Chain | Description 
    36467 3 | No description available 
    36468 Y | No description available 
    36469 Z | No description available 
    36470 a | No description available 
    36471 b | No description available 
    36472 c | No description available 
    36473 e | No description available 
    36474 l | No description available 
    36475 v | No description available 
    36476  
    36477 
    36478 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36479 > PTC/dEc1-J240-coot-1.pdb id 25.1 name dE_J240_c1
    36480 
    36481 Summary of feedback from opening
    36482 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc1-J240-coot-1.pdb 
    36483 --- 
    36484 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    36485 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    36486 6 
    36487 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    36488 8 
    36489 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    36490 23 
    36491 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    36492 13 
    36493 320 messages similar to the above omitted 
    36494 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    36495 -1 N LEU l 102 O LEU l 33 
    36496 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    36497 0 
    36498 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    36499 -1 N LYS l 133 O SER l 30 
    36500 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    36501 0 
    36502 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    36503 115 -1 N ILE m 113 O ILE m 34 
    36504 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    36505 103 -1 N CYS m 100 O MET m 110 
    36506 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    36507 0 
    36508 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    36509 -1 N VAL n 39 O VAL n 49 
    36510 55 messages similar to the above omitted 
    36511 Cannot find LINK/SSBOND residue ZN (101 ) 
    36512 Cannot find LINK/SSBOND residue ZN (101 ) 
    36513 Cannot find LINK/SSBOND residue ZN (101 ) 
    36514 Cannot find LINK/SSBOND residue ZN (101 ) 
    36515  
    36516 Chain information for dE_J240_c1 #7 
    36517 --- 
    36518 Chain | Description 
    36519 3 | No description available 
    36520 Y | No description available 
    36521 Z | No description available 
    36522 a | No description available 
    36523 b | No description available 
    36524 c | No description available 
    36525 e | No description available 
    36526 l | No description available 
    36527 v | No description available 
    36528  
    36529 
    36530 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36531 > PTC/dEc2-J241-coot-1.pdb id 25.2 name dE_J241_c2
    36532 
    36533 Summary of feedback from opening
    36534 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc2-J241-coot-1.pdb 
    36535 --- 
    36536 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    36537 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    36538 6 
    36539 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    36540 8 
    36541 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    36542 23 
    36543 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    36544 13 
    36545 320 messages similar to the above omitted 
    36546 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    36547 -1 N LEU l 102 O LEU l 33 
    36548 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    36549 0 
    36550 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    36551 -1 N LYS l 133 O SER l 30 
    36552 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    36553 0 
    36554 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    36555 115 -1 N ILE m 113 O ILE m 34 
    36556 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    36557 103 -1 N CYS m 100 O MET m 110 
    36558 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    36559 0 
    36560 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    36561 -1 N VAL n 39 O VAL n 49 
    36562 55 messages similar to the above omitted 
    36563 Cannot find LINK/SSBOND residue ZN (101 ) 
    36564 Cannot find LINK/SSBOND residue ZN (101 ) 
    36565 Cannot find LINK/SSBOND residue ZN (101 ) 
    36566 Cannot find LINK/SSBOND residue ZN (101 ) 
    36567  
    36568 Chain information for dE_J241_c2 #7 
    36569 --- 
    36570 Chain | Description 
    36571 3 | No description available 
    36572 Y | No description available 
    36573 Z | No description available 
    36574 a | No description available 
    36575 b | No description available 
    36576 c | No description available 
    36577 e | No description available 
    36578 l | No description available 
    36579 v | No description available 
    36580  
    36581 
    36582 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36583 > PTC/dEc3-J242-coot-1.pdb id 25.3 name dE_J242_c3
    36584 
    36585 No such file/path: /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36586 PTC/dEc3-J242-coot-1.pdb 
    36587 
    36588 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36589 > PTC/dEc5-J244-coot-1.pdb id 25.5 name dE_J244_c5
    36590 
    36591 Summary of feedback from opening
    36592 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc5-J244-coot-1.pdb 
    36593 --- 
    36594 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    36595 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    36596 6 
    36597 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    36598 8 
    36599 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    36600 23 
    36601 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    36602 13 
    36603 320 messages similar to the above omitted 
    36604 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    36605 -1 N LEU l 102 O LEU l 33 
    36606 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    36607 0 
    36608 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    36609 -1 N LYS l 133 O SER l 30 
    36610 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    36611 0 
    36612 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    36613 115 -1 N ILE m 113 O ILE m 34 
    36614 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    36615 103 -1 N CYS m 100 O MET m 110 
    36616 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    36617 0 
    36618 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    36619 -1 N VAL n 39 O VAL n 49 
    36620 55 messages similar to the above omitted 
    36621 Cannot find LINK/SSBOND residue ZN (101 ) 
    36622 Cannot find LINK/SSBOND residue ZN (101 ) 
    36623 Cannot find LINK/SSBOND residue ZN (101 ) 
    36624 Cannot find LINK/SSBOND residue ZN (101 ) 
    36625  
    36626 Chain information for dE_J244_c5 #7 
    36627 --- 
    36628 Chain | Description 
    36629 3 | No description available 
    36630 Y | No description available 
    36631 Z | No description available 
    36632 a | No description available 
    36633 b | No description available 
    36634 c | No description available 
    36635 e | No description available 
    36636 l | No description available 
    36637 v | No description available 
    36638  
    36639 
    36640 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36641 > PTC/dEc6-J245-coot-1.pdb id 25.6 name dE_J245_c6
    36642 
    36643 Summary of feedback from opening
    36644 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc6-J245-coot-1.pdb 
    36645 --- 
    36646 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    36647 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    36648 6 
    36649 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    36650 8 
    36651 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    36652 23 
    36653 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    36654 13 
    36655 320 messages similar to the above omitted 
    36656 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    36657 -1 N LEU l 102 O LEU l 33 
    36658 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    36659 0 
    36660 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    36661 -1 N LYS l 133 O SER l 30 
    36662 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    36663 0 
    36664 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    36665 115 -1 N ILE m 113 O ILE m 34 
    36666 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    36667 103 -1 N CYS m 100 O MET m 110 
    36668 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    36669 0 
    36670 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    36671 -1 N VAL n 39 O VAL n 49 
    36672 55 messages similar to the above omitted 
    36673 Cannot find LINK/SSBOND residue ZN (101 ) 
    36674 Cannot find LINK/SSBOND residue ZN (101 ) 
    36675 Cannot find LINK/SSBOND residue ZN (101 ) 
    36676 Cannot find LINK/SSBOND residue ZN (101 ) 
    36677  
    36678 Chain information for dE_J245_c6 #7 
    36679 --- 
    36680 Chain | Description 
    36681 3 | No description available 
    36682 Z | No description available 
    36683 a | No description available 
    36684 b | No description available 
    36685 c | No description available 
    36686 e | No description available 
    36687 l | No description available 
    36688 v | No description available 
    36689  
    36690 
    36691 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36692 > PTC/dEc7-J246-coot-1.pdb id 25.7 name dE_J246_c7
    36693 
    36694 Summary of feedback from opening
    36695 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc7-J246-coot-1.pdb 
    36696 --- 
    36697 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    36698 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    36699 6 
    36700 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    36701 8 
    36702 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    36703 23 
    36704 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    36705 13 
    36706 320 messages similar to the above omitted 
    36707 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    36708 -1 N LEU l 102 O LEU l 33 
    36709 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    36710 0 
    36711 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    36712 -1 N LYS l 133 O SER l 30 
    36713 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    36714 0 
    36715 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    36716 115 -1 N ILE m 113 O ILE m 34 
    36717 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    36718 103 -1 N CYS m 100 O MET m 110 
    36719 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    36720 0 
    36721 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    36722 -1 N VAL n 39 O VAL n 49 
    36723 55 messages similar to the above omitted 
    36724 Cannot find LINK/SSBOND residue ZN (101 ) 
    36725 Cannot find LINK/SSBOND residue ZN (101 ) 
    36726 Cannot find LINK/SSBOND residue ZN (101 ) 
    36727 Cannot find LINK/SSBOND residue ZN (101 ) 
    36728  
    36729 Chain information for dE_J246_c7 #7 
    36730 --- 
    36731 Chain | Description 
    36732 3 | No description available 
    36733 Y | No description available 
    36734 Z | No description available 
    36735 a | No description available 
    36736 b | No description available 
    36737 c | No description available 
    36738 e | No description available 
    36739 l | No description available 
    36740 v | No description available 
    36741  
    36742 
    36743 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36744 > PTC/dEc8-J247-coot-1.pdb id 25.8 name dE_J247_c8
    36745 
    36746 Summary of feedback from opening
    36747 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc8-J247-coot-1.pdb 
    36748 --- 
    36749 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    36750 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    36751 6 
    36752 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    36753 8 
    36754 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    36755 23 
    36756 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    36757 13 
    36758 320 messages similar to the above omitted 
    36759 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    36760 -1 N LEU l 102 O LEU l 33 
    36761 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    36762 0 
    36763 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    36764 -1 N LYS l 133 O SER l 30 
    36765 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    36766 0 
    36767 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    36768 115 -1 N ILE m 113 O ILE m 34 
    36769 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    36770 103 -1 N CYS m 100 O MET m 110 
    36771 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    36772 0 
    36773 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    36774 -1 N VAL n 39 O VAL n 49 
    36775 55 messages similar to the above omitted 
    36776 Cannot find LINK/SSBOND residue ZN (101 ) 
    36777 Cannot find LINK/SSBOND residue ZN (101 ) 
    36778 Cannot find LINK/SSBOND residue ZN (101 ) 
    36779 Cannot find LINK/SSBOND residue ZN (101 ) 
    36780  
    36781 Chain information for dE_J247_c8 #7 
    36782 --- 
    36783 Chain | Description 
    36784 3 | No description available 
    36785 Z | No description available 
    36786 a | No description available 
    36787 b | No description available 
    36788 c | No description available 
    36789 e | No description available 
    36790 l | No description available 
    36791 v | No description available 
    36792  
    36793 
    36794 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    36795 > PTC/dEc9-J248-coot-1.pdb id 25.9 name dE_J248_c9
    36796 
    36797 Summary of feedback from opening
    36798 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc9-J248-coot-1.pdb 
    36799 --- 
    36800 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    36801 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    36802 6 
    36803 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    36804 8 
    36805 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    36806 23 
    36807 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    36808 13 
    36809 320 messages similar to the above omitted 
    36810 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    36811 -1 N LEU l 102 O LEU l 33 
    36812 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    36813 0 
    36814 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    36815 -1 N LYS l 133 O SER l 30 
    36816 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    36817 0 
    36818 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    36819 115 -1 N ILE m 113 O ILE m 34 
    36820 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    36821 103 -1 N CYS m 100 O MET m 110 
    36822 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    36823 0 
    36824 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    36825 -1 N VAL n 39 O VAL n 49 
    36826 55 messages similar to the above omitted 
    36827 Cannot find LINK/SSBOND residue ZN (101 ) 
    36828 Cannot find LINK/SSBOND residue ZN (101 ) 
    36829 Cannot find LINK/SSBOND residue ZN (101 ) 
    36830 Cannot find LINK/SSBOND residue ZN (101 ) 
    36831  
    36832 Chain information for dE_J248_c9 #7 
    36833 --- 
    36834 Chain | Description 
    36835 3 | No description available 
    36836 Y | No description available 
    36837 Z | No description available 
    36838 a | No description available 
    36839 b | No description available 
    36840 c | No description available 
    36841 e | No description available 
    36842 l | No description available 
    36843 v | No description available 
    36844  
    36845 
    36846 > rename #25 dE-PTC-models
    36847 
    36848 > set bgColor white
    36849 
    36850 > style stick
    36851 
    36852 Changed 1170284 atom styles 
    36853 
    36854 > graphics quality 1
    36855 
    36856 > volume step 1
    36857 
    36858 > volume color gray
    36859 
    36860 > volume style mesh
    36861 
    36862 > volume hide #2.*
    36863 
    36864 Expected a keyword 
    36865 
    36866 > volume #2.* hide
    36867 
    36868 > volume #2.*#3.*#4.*#5.*#10.*#11.*#12.*#13.*#20.*#21.*#23.* hide
    36869 
    36870 > hide #!14.1 models
    36871 
    36872 > hide #!6.*#!14.*#!22.*#!25.* models
    36873 
    36874 > hide #1.2:HOH
    36875 
    36876 > color #1.2 grey
    36877 
    36878 > color #1.12 gray
    36879 
    36880 > hide #!6.*.2 models
    36881 
    36882 > hide #!14.*.2 models
    36883 
    36884 > hide #!22.*.2 models
    36885 
    36886 > hide #!25.*.2 models
    36887 
    36888 > show #!20.1 models
    36889 
    36890 > show #!22.1 models
    36891 
    36892 > view #22.1/a:2552
    36893 
    36894 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj111-APE-PTC-
    36895 > coot-4-7k00scale.pdb id 22.1 name dE_J111_ape
    36896 
    36897 Summary of feedback from opening
    36898 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj111-APE-PTC-
    36899 coot-4-7k00scale.pdb 
    36900 --- 
    36901 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    36902 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    36903 6 
    36904 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    36905 8 
    36906 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    36907 23 
    36908 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    36909 13 
    36910 135 messages similar to the above omitted 
    36911 End residue of secondary structure not found: HELIX 141 141 THR l 42 LYS l 58
    36912 1 17 
    36913 Start residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l
    36914 125 1 17 
    36915 Start residue of secondary structure not found: HELIX 143 143 ASN m 13 GLU m
    36916 32 1 20 
    36917 Start residue of secondary structure not found: HELIX 144 144 LEU m 38 ASP m
    36918 58 1 21 
    36919 Start residue of secondary structure not found: HELIX 145 145 SER m 59 ARG m
    36920 71 1 13 
    36921 Start residue of secondary structure not found: HELIX 146 146 ASP m 72 ALA m
    36922 88 1 17 
    36923 Start residue of secondary structure not found: HELIX 147 147 ASP n 2 GLY n 22
    36924 1 21 
    36925 178 messages similar to the above omitted 
    36926 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    36927 -1 N LEU l 102 O LEU l 33 
    36928 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    36929 0 
    36930 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    36931 -1 N LYS l 133 O SER l 30 
    36932 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    36933 0 
    36934 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    36935 115 -1 N ILE m 113 O ILE m 34 
    36936 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    36937 103 -1 N CYS m 100 O MET m 110 
    36938 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    36939 0 
    36940 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    36941 -1 N VAL n 39 O VAL n 49 
    36942 55 messages similar to the above omitted 
    36943 Cannot find LINK/SSBOND residue ZN (101 ) 
    36944 Cannot find LINK/SSBOND residue ZN (101 ) 
    36945 Cannot find LINK/SSBOND residue ZN (101 ) 
    36946 Cannot find LINK/SSBOND residue ZN (101 ) 
    36947  
    36948 Chain information for dE_J111_ape #7 
    36949 --- 
    36950 Chain | Description 
    36951 3 | No description available 
    36952 Y | No description available 
    36953 Z | No description available 
    36954 a | No description available 
    36955 b | No description available 
    36956 c | No description available 
    36957 e | No description available 
    36958 l | No description available 
    36959 v | No description available 
    36960  
    36961 
    36962 > style #!22.1#!22.1.3 stick
    36963 
    36964 Changed 20827 atom styles 
    36965 
    36966 > close #22.1-4
    36967 
    36968 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj111-APE-PTC-
    36969 > coot-4-7k00scale.pdb id 22.1 name dE_J111_ape
    36970 
    36971 Summary of feedback from opening
    36972 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj111-APE-PTC-
    36973 coot-4-7k00scale.pdb 
    36974 --- 
    36975 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    36976 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    36977 6 
    36978 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    36979 8 
    36980 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    36981 23 
    36982 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    36983 13 
    36984 135 messages similar to the above omitted 
    36985 End residue of secondary structure not found: HELIX 141 141 THR l 42 LYS l 58
    36986 1 17 
    36987 Start residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l
    36988 125 1 17 
    36989 Start residue of secondary structure not found: HELIX 143 143 ASN m 13 GLU m
    36990 32 1 20 
    36991 Start residue of secondary structure not found: HELIX 144 144 LEU m 38 ASP m
    36992 58 1 21 
    36993 Start residue of secondary structure not found: HELIX 145 145 SER m 59 ARG m
    36994 71 1 13 
    36995 Start residue of secondary structure not found: HELIX 146 146 ASP m 72 ALA m
    36996 88 1 17 
    36997 Start residue of secondary structure not found: HELIX 147 147 ASP n 2 GLY n 22
    36998 1 21 
    36999 178 messages similar to the above omitted 
    37000 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    37001 -1 N LEU l 102 O LEU l 33 
    37002 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    37003 0 
    37004 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    37005 -1 N LYS l 133 O SER l 30 
    37006 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    37007 0 
    37008 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    37009 115 -1 N ILE m 113 O ILE m 34 
    37010 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    37011 103 -1 N CYS m 100 O MET m 110 
    37012 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    37013 0 
    37014 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    37015 -1 N VAL n 39 O VAL n 49 
    37016 55 messages similar to the above omitted 
    37017 Cannot find LINK/SSBOND residue ZN (101 ) 
    37018 Cannot find LINK/SSBOND residue ZN (101 ) 
    37019 Cannot find LINK/SSBOND residue ZN (101 ) 
    37020 Cannot find LINK/SSBOND residue ZN (101 ) 
    37021  
    37022 Chain information for dE_J111_ape #7 
    37023 --- 
    37024 Chain | Description 
    37025 3 | No description available 
    37026 Y | No description available 
    37027 Z | No description available 
    37028 a | No description available 
    37029 b | No description available 
    37030 c | No description available 
    37031 e | No description available 
    37032 l | No description available 
    37033 v | No description available 
    37034  
    37035 
    37036 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj112-AP-PTC-
    37037 > coot-4-7k00scale.pdb id 22.2 name dE_J112_ap
    37038 
    37039 Summary of feedback from opening
    37040 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj112-AP-PTC-
    37041 coot-4-7k00scale.pdb 
    37042 --- 
    37043 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    37044 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    37045 6 
    37046 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    37047 8 
    37048 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    37049 23 
    37050 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    37051 13 
    37052 135 messages similar to the above omitted 
    37053 End residue of secondary structure not found: HELIX 141 141 THR l 42 LYS l 58
    37054 1 17 
    37055 Start residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l
    37056 125 1 17 
    37057 Start residue of secondary structure not found: HELIX 143 143 ASN m 13 GLU m
    37058 32 1 20 
    37059 Start residue of secondary structure not found: HELIX 144 144 LEU m 38 ASP m
    37060 58 1 21 
    37061 Start residue of secondary structure not found: HELIX 145 145 SER m 59 ARG m
    37062 71 1 13 
    37063 Start residue of secondary structure not found: HELIX 146 146 ASP m 72 ALA m
    37064 88 1 17 
    37065 Start residue of secondary structure not found: HELIX 147 147 ASP n 2 GLY n 22
    37066 1 21 
    37067 178 messages similar to the above omitted 
    37068 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    37069 -1 N LEU l 102 O LEU l 33 
    37070 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    37071 0 
    37072 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    37073 -1 N LYS l 133 O SER l 30 
    37074 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    37075 0 
    37076 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    37077 115 -1 N ILE m 113 O ILE m 34 
    37078 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    37079 103 -1 N CYS m 100 O MET m 110 
    37080 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    37081 0 
    37082 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    37083 -1 N VAL n 39 O VAL n 49 
    37084 55 messages similar to the above omitted 
    37085 Cannot find LINK/SSBOND residue ZN (101 ) 
    37086 Cannot find LINK/SSBOND residue ZN (101 ) 
    37087 Cannot find LINK/SSBOND residue ZN (101 ) 
    37088 Cannot find LINK/SSBOND residue ZN (101 ) 
    37089  
    37090 Chain information for dE_J112_ap #7 
    37091 --- 
    37092 Chain | Description 
    37093 3 | No description available 
    37094 Y | No description available 
    37095 Z | No description available 
    37096 a | No description available 
    37097 b | No description available 
    37098 c | No description available 
    37099 e | No description available 
    37100 l | No description available 
    37101 v | No description available 
    37102  
    37103 
    37104 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj113-PE-PTC-
    37105 > coot-4-7k00scale.pdb id 22.3 name dE_J113_pe
    37106 
    37107 Summary of feedback from opening
    37108 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj113-PE-PTC-
    37109 coot-4-7k00scale.pdb 
    37110 --- 
    37111 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    37112 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    37113 6 
    37114 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    37115 8 
    37116 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    37117 23 
    37118 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    37119 13 
    37120 135 messages similar to the above omitted 
    37121 End residue of secondary structure not found: HELIX 141 141 THR l 42 LYS l 58
    37122 1 17 
    37123 Start residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l
    37124 125 1 17 
    37125 Start residue of secondary structure not found: HELIX 143 143 ASN m 13 GLU m
    37126 32 1 20 
    37127 Start residue of secondary structure not found: HELIX 144 144 LEU m 38 ASP m
    37128 58 1 21 
    37129 Start residue of secondary structure not found: HELIX 145 145 SER m 59 ARG m
    37130 71 1 13 
    37131 Start residue of secondary structure not found: HELIX 146 146 ASP m 72 ALA m
    37132 88 1 17 
    37133 Start residue of secondary structure not found: HELIX 147 147 ASP n 2 GLY n 22
    37134 1 21 
    37135 178 messages similar to the above omitted 
    37136 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    37137 -1 N LEU l 102 O LEU l 33 
    37138 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    37139 0 
    37140 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    37141 -1 N LYS l 133 O SER l 30 
    37142 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    37143 0 
    37144 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    37145 115 -1 N ILE m 113 O ILE m 34 
    37146 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    37147 103 -1 N CYS m 100 O MET m 110 
    37148 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    37149 0 
    37150 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    37151 -1 N VAL n 39 O VAL n 49 
    37152 55 messages similar to the above omitted 
    37153 Cannot find LINK/SSBOND residue ZN (101 ) 
    37154 Cannot find LINK/SSBOND residue ZN (101 ) 
    37155 Cannot find LINK/SSBOND residue ZN (101 ) 
    37156 Cannot find LINK/SSBOND residue ZN (101 ) 
    37157  
    37158 Chain information for dE_J113_pe #7 
    37159 --- 
    37160 Chain | Description 
    37161 3 | No description available 
    37162 Z | No description available 
    37163 a | No description available 
    37164 b | No description available 
    37165 c | No description available 
    37166 e | No description available 
    37167 l | No description available 
    37168 v | No description available 
    37169  
    37170 
    37171 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj124-E-PTC-
    37172 > coot-4-7k00scale.pdb id 22.4 name dE_J124_e
    37173 
    37174 Summary of feedback from opening
    37175 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/dEj124-E-PTC-
    37176 coot-4-7k00scale.pdb 
    37177 --- 
    37178 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    37179 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    37180 6 
    37181 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    37182 8 
    37183 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    37184 23 
    37185 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    37186 13 
    37187 135 messages similar to the above omitted 
    37188 End residue of secondary structure not found: HELIX 141 141 THR l 42 LYS l 58
    37189 1 17 
    37190 Start residue of secondary structure not found: HELIX 142 142 PRO l 109 PRO l
    37191 125 1 17 
    37192 Start residue of secondary structure not found: HELIX 143 143 ASN m 13 GLU m
    37193 32 1 20 
    37194 Start residue of secondary structure not found: HELIX 144 144 LEU m 38 ASP m
    37195 58 1 21 
    37196 Start residue of secondary structure not found: HELIX 145 145 SER m 59 ARG m
    37197 71 1 13 
    37198 Start residue of secondary structure not found: HELIX 146 146 ASP m 72 ALA m
    37199 88 1 17 
    37200 Start residue of secondary structure not found: HELIX 147 147 ASP n 2 GLY n 22
    37201 1 21 
    37202 178 messages similar to the above omitted 
    37203 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    37204 -1 N LEU l 102 O LEU l 33 
    37205 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    37206 0 
    37207 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    37208 -1 N LYS l 133 O SER l 30 
    37209 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    37210 0 
    37211 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    37212 115 -1 N ILE m 113 O ILE m 34 
    37213 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    37214 103 -1 N CYS m 100 O MET m 110 
    37215 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    37216 0 
    37217 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    37218 -1 N VAL n 39 O VAL n 49 
    37219 55 messages similar to the above omitted 
    37220 Cannot find LINK/SSBOND residue ZN (101 ) 
    37221 Cannot find LINK/SSBOND residue ZN (101 ) 
    37222 Cannot find LINK/SSBOND residue ZN (101 ) 
    37223 Cannot find LINK/SSBOND residue ZN (101 ) 
    37224  
    37225 Chain information for dE_J124_e #7 
    37226 --- 
    37227 Chain | Description 
    37228 3 | No description available 
    37229 a | No description available 
    37230 b | No description available 
    37231 c | No description available 
    37232 e | No description available 
    37233 l | No description available 
    37234 v | No description available 
    37235  
    37236 
    37237 > style #!22.1-4 stick
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    37239 Changed 40471 atom styles 
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    37549 > color #6.*/a:2491 orange
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    37705 > hide #!12.9 models
    37706 
    37707 > hide #!12.10 models
    37708 
    37709 > show #!12.3 models
    37710 
    37711 > hide #!12.3 models
    37712 
    37713 > show #!12.3 models
    37714 
    37715 > view #6.2/a:2494
    37716 
    37717 > show #!4.2 models
    37718 
    37719 > hide #!4.2 models
    37720 
    37721 > show #!4.2 models
    37722 
    37723 > hide #!4.2 models
    37724 
    37725 > show #!4.2 models
    37726 
    37727 > volume #4.* level 0.6
    37728 
    37729 > hide #!4.2 models
    37730 
    37731 > show #!4.1 models
    37732 
    37733 > show #!4.2 models
    37734 
    37735 > hide #!4.1 models
    37736 
    37737 > show #!4.3 models
    37738 
    37739 > hide #!4.2 models
    37740 
    37741 > hide #!4.3 models
    37742 
    37743 > show #!4.1 models
    37744 
    37745 > hide #!4.1 models
    37746 
    37747 > show #!4.2 models
    37748 
    37749 > show #!4.4 models
    37750 
    37751 > hide #!4.2 models
    37752 
    37753 > show #!4.5 models
    37754 
    37755 > hide #!4.4 models
    37756 
    37757 > show #!4.7 models
    37758 
    37759 > hide #!4.5 models
    37760 
    37761 > volume style surface
    37762 
    37763 > windowsize 600 400
    37764 
    37765 > volume meshLighting
    37766 
    37767 Missing "meshLighting" keyword's argument 
    37768 
    37769 > volume style mesh
    37770 
    37771 > hide #!6.2 models
    37772 
    37773 > show #!6.2 models
    37774 
    37775 > hide #!6.2 models
    37776 
    37777 > show #!6.2 models
    37778 
    37779 > hide #!4.7 models
    37780 
    37781 > show #!4.7 models
    37782 
    37783 > hide #!4.7 models
    37784 
    37785 > show #!2.1 models
    37786 
    37787 > show #!25.1 models
    37788 
    37789 > hide #!25.1 models
    37790 
    37791 > show #!25.1 models
    37792 
    37793 > hide #!25.1 models
    37794 
    37795 > show #!23.1 models
    37796 
    37797 > hide #!23.1 models
    37798 
    37799 > show #!23.1 models
    37800 
    37801 > volume #23.1 level 0.1
    37802 
    37803 > volume #23.* level 0.1
    37804 
    37805 > hide #!23.1 models
    37806 
    37807 > show #!23.1 models
    37808 
    37809 > hide #!23.1 models
    37810 
    37811 > show #!23.1 models
    37812 
    37813 > hide #!23.1 models
    37814 
    37815 > show #!23.2 models
    37816 
    37817 > hide #!23.2 models
    37818 
    37819 > show #!23.3 models
    37820 
    37821 > hide #!23.3 models
    37822 
    37823 > show #!23.3 models
    37824 
    37825 > hide #!23.3 models
    37826 
    37827 > show #!23.3 models
    37828 
    37829 > hide #!23.3 models
    37830 
    37831 > show #!23.4 models
    37832 
    37833 > hide #!23.4 models
    37834 
    37835 > show #!23.5 models
    37836 
    37837 > hide #!23.5 models
    37838 
    37839 > show #!23.6 models
    37840 
    37841 > hide #!23.6 models
    37842 
    37843 > show #!23.7 models
    37844 
    37845 > hide #!23.7 models
    37846 
    37847 > show #!23.8 models
    37848 
    37849 > hide #!23.8 models
    37850 
    37851 > show #!23.9 models
    37852 
    37853 > hide #!23.9 models
    37854 
    37855 > show #!23.10 models
    37856 
    37857 > hide #!23.10 models
    37858 
    37859 > volume style mesh
    37860 
    37861 > nucleotides atoms
    37862 
    37863 > windowsize 600 600
    37864 
    37865 > lighting simple
    37866 
    37867 > graphics silhouettes false
    37868 
    37869 > cartoon suppressBackboneDisplay false
    37870 
    37871 Computing secondary structure 
    37872 [Repeated 3 time(s)]
    37873 
    37874 > cartoon tether opacity 0
    37875 
    37876 > cartoon tether scale 0
    37877 
    37878 > view list
    37879 
    37880 No named views. 
    37881 
    37882 > view matrix camera
    37883 > 0.87887,-0.35882,0.31438,170.09,-0.47223,-0.56076,0.68011,235.28,-0.067746,-0.74618,-0.66228,87.342
    37884 
    37885 [Repeated 1 time(s)]
    37886 
    37887 > near offset -27.749, axis -0.314,-0.680,0.662, point 156.1,204.9,116.9)
    37888 
    37889 Unknown command: near offset -27.749, axis -0.314,-0.680,0.662, point
    37890 156.1,204.9,116.9) 
    37891 
    37892 > far offset 9.6172, axis 0.314,0.680,-0.662, point 144.3,179.5,141.6)
    37893 
    37894 Unknown command: far offset 9.6172, axis 0.314,0.680,-0.662, point
    37895 144.3,179.5,141.6) 
    37896 
    37897 > view matrix camera
    37898 > 0.87887,-0.35882,0.31438,170.09,-0.47223,-0.56076,0.68011,235.28,-0.067746,-0.74618,-0.66228,87.342
    37899 
    37900 > ~clip
    37901 
    37902 > clip near -27.749 far 9.6172
    37903 
    37904 > hide #!6.6 models
    37905 
    37906 > hide #!6.2 models
    37907 
    37908 > show #!6.2 models
    37909 
    37910 > hide #!2.1 models
    37911 
    37912 > view matrix camera
    37913 > 0.87887,-0.35882,0.31438,170.09,-0.47223,-0.56076,0.68011,235.28,-0.067746,-0.74618,-0.66228,87.342
    37914 
    37915 > ~clip
    37916 
    37917 > clip near -27.749 far 9.6172
    37918 
    37919 > hide #!6.2 models
    37920 
    37921 > show #!1.2 models
    37922 
    37923 > hide #1.2
    37924 
    37925 > color #1.2/Y maroon
    37926 
    37927 > color #1.2/Z rebecca purple
    37928 
    37929 > color #1.2/a:2058-2064 cornflower blue
    37930 
    37931 > color #1.2/a:2446-2447 light pink
    37932 
    37933 > color #1.2/a:2450-2451 gold
    37934 
    37935 > color #1.2/a:2499-2506 green yellow
    37936 
    37937 > color #1.2/a:2499-2506 green yellow target c
    37938 
    37939 > ~show #1.2
    37940 
    37941 > ~hbonds #1.2
    37942 
    37943 > name to_show
    37944 > #1.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    37945 
    37946 > show to_show
    37947 
    37948 > ~cartoon #1.2
    37949 
    37950 > cartoon #1.2/a:2058-2064,2499-2506,2450-2451/Y:73-76/Z:73-76
    37951 
    37952 > transparency #1.2 60 target c
    37953 
    37954 > hbonds to_show & sidechain restrict to_show & sidechain color white
    37955 
    37956 19 hydrogen bonds found 
    37957 
    37958 > volume # color black transparency 0.8
    37959 
    37960 Expected a density maps specifier or a keyword 
    37961 
    37962 > volume zone # nearAtoms #1.2/a:2058-2064,2499-2506,2447,2450,2451 & sideonly
    37963 > range 2
    37964 
    37965 Missing or invalid "volumes" argument: invalid density maps specifier 
    37966 
    37967 > bond #1.2/Y:76@N3':101@C
    37968 
    37969 Created 1 bond 
    37970 
    37971 > bond #1.2/Z:76@N3':101@C
    37972 
    37973 Created 1 bond 
    37974 
    37975 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    37976 
    37977 > style #1.2/Y:101 ball
    37978 
    37979 Changed 8 atom styles 
    37980 
    37981 > style #1.2/Z:101 ball
    37982 
    37983 Changed 8 atom styles 
    37984 
    37985 > size #1.2/Y:101:76@N3' ballScale 0.10 stickRadius 0.06
    37986 
    37987 Changed 8 bond radii, 1 ball scales 
    37988 
    37989 > size #1.2/Z:101:76@N3' ballScale 0.10 stickRadius 0.06
    37990 
    37991 Changed 8 bond radii, 1 ball scales 
    37992 
    37993 > ~clip
    37994 
    37995 > clip near -27.749 far 9.6172
    37996 
    37997 > view matrix camera
    37998 > 0.87887,-0.35882,0.31438,170.09,-0.47223,-0.56076,0.68011,235.28,-0.067746,-0.74618,-0.66228,87.342
    37999 
    38000 [Repeated 1 time(s)]
    38001 
    38002 > ~clip
    38003 
    38004 > clip near -27.749 far 9.6172
    38005 
    38006 > windowsize 1000,1000
    38007 
    38008 Expected an integer >= 1 or a keyword 
    38009 
    38010 > windowsize 1000 1000
    38011 
    38012 > show #1.2/a:2447-2450
    38013 
    38014 > show #1.2/a:2447-2450 target c
    38015 
    38016 > show #1.2/a:2447-2451 target c
    38017 
    38018 > color #1.2/a:2447-2451 gold
    38019 
    38020 > color #1.2/a:2451 green
    38021 
    38022 > color #1.2/a:2447-2451 gold
    38023 
    38024 > color #1.2/a:2451 green traget a
    38025 
    38026 Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
    38027 'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword 
    38028 
    38029 > color #1.2/a:2451 green traget atoms
    38030 
    38031 Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
    38032 'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword 
    38033 
    38034 > color #1.2/a:2451 green target a
    38035 
    38036 > cartoon suppressBackboneDisplay true
    38037 
    38038 > ~cartoon
    38039 
    38040 > cartoon #1.2/a:2058-2064,2499-2506,2477-2451/Y:73-76/Z:73-76
    38041 
    38042 > cartoon #1.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    38043 
    38044 > view matrix
    38045 
    38046 view matrix camera
    38047 0.87809,-0.35753,0.31801,169.33,-0.47391,-0.55799,0.68122,233.84,-0.066106,-0.74887,-0.6594,86.842 
    38048 view matrix models
    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#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0 
    38050  
    38051 
    38052 > clip list
    38053 
    38054 Using 2 clip planes: 
    38055 near offset -23.257, axis -0.318,-0.681,0.659, point 151.7,200.5,116.7) 
    38056 far offset 10.277, axis 0.318,0.681,-0.659, point 141.1,177.6,138.7) 
    38057 
    38058 > volume style mesh
    38059 
    38060 > nucleotides atoms
    38061 
    38062 > windowsize 600 600
    38063 
    38064 > lighting simple
    38065 
    38066 > graphics silhouettes false
    38067 
    38068 > cartoon suppressBackboneDisplay true
    38069 
    38070 > cartoon tether opacity 0
    38071 
    38072 > cartoon tether scale 0
    38073 
    38074 > view matrix camera
    38075 > 0.87809,-0.35753,0.31801,169.33,-0.47391,-0.55799,0.68122,233.84,-0.066106,-0.74887,-0.6594,86.842
    38076 
    38077 > ~clip
    38078 
    38079 > clip near -23.257 far 10.277
    38080 
    38081 > view matrix camera
    38082 > 0.87809,-0.35753,0.31801,169.33,-0.47391,-0.55799,0.68122,233.84,-0.066106,-0.74887,-0.6594,86.842
    38083 
    38084 > ~clip
    38085 
    38086 > clip near -23.257 far 10.277
    38087 
    38088 > cartoon suppressBackboneDisplay false
    38089 
    38090 > ~cartoon
    38091 
    38092 > view matrix camera
    38093 > 0.87809,-0.35753,0.31801,169.33,-0.47391,-0.55799,0.68122,233.84,-0.066106,-0.74887,-0.6594,86.842
    38094 
    38095 > ~clip
    38096 
    38097 > view matrix camera
    38098 > 0.87809,-0.35753,0.31801,169.33,-0.47391,-0.55799,0.68122,233.84,-0.066106,-0.74887,-0.6594,86.842
    38099 
    38100 > clip near -23.257 far 10.277
    38101 
    38102 > view A2503_view4_map
    38103 
    38104 Expected an objects specifier or a view name or a keyword 
    38105 
    38106 > show #!1.2 models
    38107 
    38108 > hide #1.2
    38109 
    38110 > color #1.2/Y maroon
    38111 
    38112 > color #1.2/Z rebecca purple
    38113 
    38114 > color #1.2/a:2058-2064 cornflower blue
    38115 
    38116 > color #1.2/a:2447-2451 gold
    38117 
    38118 > color #1.2/a:2499-2506 green yellow
    38119 
    38120 > color #1.2/a:2499-2506 green yellow target c
    38121 
    38122 > color #1.2/a:2451 green target a
    38123 
    38124 > ~show #1.2
    38125 
    38126 > ~hbonds #1.2
    38127 
    38128 > name to_show #1.2/a:2058-2064,2499-2506,2447-2451/Y:73-76,101/Z:73-76,101
    38129 
    38130 > show to_show
    38131 
    38132 > ~cartoon #1.2
    38133 
    38134 > cartoon #1.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    38135 
    38136 > transparency #1.2 60 target c
    38137 
    38138 > hbonds to_show & sidechain restrict to_show & sidechain color white
    38139 
    38140 20 hydrogen bonds found 
    38141 
    38142 > volume # color black transparency 0.8
    38143 
    38144 Expected a density maps specifier or a keyword 
    38145 
    38146 > volume zone # nearAtoms #1.2/a:2058-2064,2499-2506,2447,2450,2451 & sideonly
    38147 > range 2
    38148 
    38149 Missing or invalid "volumes" argument: invalid density maps specifier 
    38150 
    38151 > bond #1.2/Y:76@N3':101@C
    38152 
    38153 Created 0 bonds 
    38154 
    38155 > bond #1.2/Z:76@N3':101@C
    38156 
    38157 Created 0 bonds 
    38158 
    38159 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    38160 
    38161 > style #1.2/Y:101 ball
    38162 
    38163 Changed 8 atom styles 
    38164 
    38165 > style #1.2/Z:101 ball
    38166 
    38167 Changed 8 atom styles 
    38168 
    38169 > size #1.2/Y:101:76@N3' ballScale 0.10 stickRadius 0.06
    38170 
    38171 Changed 8 bond radii, 1 ball scales 
    38172 
    38173 > size #1.2/Z:101:76@N3' ballScale 0.10 stickRadius 0.06
    38174 
    38175 Changed 8 bond radii, 1 ball scales 
    38176 
    38177 > cartoon suppressBackboneDisplay true
    38178 
    38179 > show #!1.2 models
    38180 
    38181 > hide #1.2
    38182 
    38183 > color #1.2/Y maroon
    38184 
    38185 > color #1.2/Z rebecca purple
    38186 
    38187 > color #1.2/a:2058-2064 cornflower blue
    38188 
    38189 > color #1.2/a:2447-2451 gold
    38190 
    38191 > color #1.2/a:2499-2506 green yellow
    38192 
    38193 > color #1.2/a:2499-2506 green yellow target c
    38194 
    38195 > color #1.2/a:2451 green target a
    38196 
    38197 > ~show #1.2
    38198 
    38199 > ~hbonds #1.2
    38200 
    38201 > name to_show #1.2/a:2058-2064,2499-2506,2447-2451/Y:73-76,101/Z:73-76,101
    38202 
    38203 > show to_show
    38204 
    38205 > ~cartoon #1.2
    38206 
    38207 > cartoon #1.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    38208 
    38209 > transparency #1.2 60 target c
    38210 
    38211 > hbonds to_show & sidechain restrict to_show & sidechain color white
    38212 
    38213 20 hydrogen bonds found 
    38214 
    38215 > volume # color black transparency 0.8
    38216 
    38217 Expected a density maps specifier or a keyword 
    38218 
    38219 > volume zone # nearAtoms #1.2/a:2058-2064,2499-2506,2447,2450,2451 & sideonly
    38220 > range 2
    38221 
    38222 Missing or invalid "volumes" argument: invalid density maps specifier 
    38223 
    38224 > bond #1.2/Y:76@N3':101@C
    38225 
    38226 Created 0 bonds 
    38227 
    38228 > bond #1.2/Z:76@N3':101@C
    38229 
    38230 Created 0 bonds 
    38231 
    38232 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    38233 
    38234 > style #1.2/Y:101 ball
    38235 
    38236 Changed 8 atom styles 
    38237 
    38238 > style #1.2/Z:101 ball
    38239 
    38240 Changed 8 atom styles 
    38241 
    38242 > size #1.2/Y:101:76@N3' ballScale 0.10 stickRadius 0.06
    38243 
    38244 Changed 8 bond radii, 1 ball scales 
    38245 
    38246 > size #1.2/Z:101:76@N3' ballScale 0.10 stickRadius 0.06
    38247 
    38248 Changed 8 bond radii, 1 ball scales 
    38249 
    38250 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_8emm.png height
    38251 > 600 width 600 supersample 3
    38252 
    38253 > hide #!1.2 models
    38254 
    38255 > hide #!1.1 models
    38256 
    38257 > show #!1.7 models
    38258 
    38259 > hide #1.7
    38260 
    38261 > color #1.7/Y maroon
    38262 
    38263 > color #1.7/Z rebecca purple
    38264 
    38265 > color #1.7/a:2058-2064 cornflower blue
    38266 
    38267 > color #1.7/a:2447-2451 gold
    38268 
    38269 > color #1.7/a:2499-2506 green yellow
    38270 
    38271 > color #1.7/a:2499-2506 green yellow target c
    38272 
    38273 > color #1.7/a:2451 green target a
    38274 
    38275 > ~show #1.7
    38276 
    38277 > ~hbonds #1.7
    38278 
    38279 > name to_show #1.7/a:2058-2064,2499-2506,2447-2451/Y:73-76,101/Z:73-76,101
    38280 
    38281 > show to_show
    38282 
    38283 > ~cartoon #1.7
    38284 
    38285 > cartoon #1.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    38286 
    38287 > transparency #1.7 60 target c
    38288 
    38289 > hbonds to_show & sidechain restrict to_show & sidechain color white
    38290 
    38291 14 hydrogen bonds found 
    38292 
    38293 > volume # color black transparency 0.8
    38294 
    38295 Expected a density maps specifier or a keyword 
    38296 
    38297 > volume zone # nearAtoms #1.7/a:2058-2064,2499-2506,2447,2450,2451 & sideonly
    38298 > range 2
    38299 
    38300 Missing or invalid "volumes" argument: invalid density maps specifier 
    38301 
    38302 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_8cgk.png height
    38303 > 600 width 600 supersample 3
    38304 
    38305 > hide #!1.7 models
    38306 
    38307 > hide #!1.6 models
    38308 
    38309 > show #!1.9 models
    38310 
    38311 > hide #1.9
    38312 
    38313 > color #1.9/Y maroon
    38314 
    38315 > color #1.9/Z rebecca purple
    38316 
    38317 > color #1.9/A:2058-2064 cornflower blue
    38318 
    38319 > color #1.9/A:2447-2451 gold
    38320 
    38321 > color #1.9/A:2499-2506 green yellow
    38322 
    38323 > color #1.9/A:2499-2506 green yellow target c
    38324 
    38325 > color #1.9/A:2451 green target a
    38326 
    38327 > ~show #1.9
    38328 
    38329 > ~hbonds #1.9
    38330 
    38331 > name to_show #1.9/A:2058-2064,2499-2506,2447-2451/Y:73-76,101/Z:73-76,101
    38332 
    38333 > show to_show
    38334 
    38335 > ~cartoon #1.9
    38336 
    38337 > cartoon #1.9/A:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    38338 
    38339 > transparency #1.9 60 target c
    38340 
    38341 > hbonds to_show & sidechain restrict to_show & sidechain color white
    38342 
    38343 7 hydrogen bonds found 
    38344 
    38345 > volume # color black transparency 0.8
    38346 
    38347 Expected a density maps specifier or a keyword 
    38348 
    38349 > volume zone # nearAtoms #1.9/A:2058-2064,2499-2506,2447,2450,2451 & sideonly
    38350 > range 2
    38351 
    38352 Missing or invalid "volumes" argument: invalid density maps specifier 
    38353 
    38354 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_7bv8.png height
    38355 > 600 width 600 supersample 3
    38356 
    38357 > hide #!1.9 models
    38358 
    38359 > hide #!1.8 models
    38360 
    38361 > show #!1.11 models
    38362 
    38363 > hide #1.11
    38364 
    38365 > color #1.11/Y maroon
    38366 
    38367 > color #1.11/B8 rebecca purple
    38368 
    38369 > color #1.11/BA:2058-2064 cornflower blue
    38370 
    38371 > color #1.11/BA:2447-2451 gold
    38372 
    38373 > color #1.11/BA:2499-2506 green yellow
    38374 
    38375 > color #1.11/BA:2499-2506 green yellow target c
    38376 
    38377 > color #1.11/BA:2451 green target a
    38378 
    38379 > ~show #1.11
    38380 
    38381 > ~hbonds #1.11
    38382 
    38383 > name to_show #1.11/BA:2058-2064,2499-2506,2447-2451/Y:73-76,101/B8:73-76,101
    38384 
    38385 > show to_show
    38386 
    38387 > ~cartoon #1.11
    38388 
    38389 > cartoon #1.11/BA:2058-2064,2499-2506,2447-2451/Y:73-76/B8:73-76
    38390 
    38391 > transparency #1.11 60 target c
    38392 
    38393 > hbonds to_show & sidechain restrict to_show & sidechain color white
    38394 
    38395 17 hydrogen bonds found 
    38396 
    38397 > volume # color black transparency 0.8
    38398 
    38399 Expected a density maps specifier or a keyword 
    38400 
    38401 > volume zone # nearAtoms #1.11/BA:2058-2064,2499-2506,2447,2450,2451 &
    38402 > sideonly range 2
    38403 
    38404 Missing or invalid "volumes" argument: invalid density maps specifier 
    38405 
    38406 > bond #1.11/B5:24@C/B8:76@O3'
    38407 
    38408 Created 1 bond 
    38409 
    38410 > cartoon #1.11/B5
    38411 
    38412 > style #1.11/B5' ball
    38413 
    38414 Changed 0 atom styles 
    38415 
    38416 > size #1.11/B5/B8:76@O3' ballScale 0.10 stickRadius 0.06
    38417 
    38418 Changed 152 bond radii, 1 ball scales 
    38419 
    38420 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_7o1a.png height
    38421 > 600 width 600 supersample 3
    38422 
    38423 > hide #!1.11 models
    38424 
    38425 > hide #!1.10 models
    38426 
    38427 > volume #1.1 level 0.008
    38428 
    38429 > volume #1.3 level 0.230
    38430 
    38431 > volume #1.10 level 0.012
    38432 
    38433 > volume #2.2 level 0.016
    38434 
    38435 > volume #2.3 level 0.014
    38436 
    38437 > volume #2.4 level 0.014
    38438 
    38439 > volume #2.5 level 0.016
    38440 
    38441 > volume #2.6 level 0.012
    38442 
    38443 > volume #4.10 level 0.400
    38444 
    38445 > volume #4.1 level 0.500
    38446 
    38447 > volume #4.2 level 0.470
    38448 
    38449 > volume #4.3 level 0.500
    38450 
    38451 > volume #4.4 level 0.500
    38452 
    38453 > volume #4.5 level 0.480
    38454 
    38455 > volume #4.6 level 0.500
    38456 
    38457 > volume #4.7 level 0.500
    38458 
    38459 > volume #4.8 level 0.550
    38460 
    38461 > volume #4.9 level 0.520
    38462 
    38463 > volume #10.1 level 0.015
    38464 
    38465 > volume #10.2 level 0.015
    38466 
    38467 > volume #10.3 level 0.012
    38468 
    38469 > volume #12.10 level 0.360
    38470 
    38471 > volume #12.1 level 0.400
    38472 
    38473 > volume #12.2 level 0.410
    38474 
    38475 > volume #12.3 level 0.430
    38476 
    38477 > volume #12.4 level 0.420
    38478 
    38479 > volume #12.5 level 0.420
    38480 
    38481 > volume #12.6 level 0.430
    38482 
    38483 > volume #12.7 level 0.440
    38484 
    38485 > volume #12.8 level 0.410
    38486 
    38487 > volume #12.9 level 0.420
    38488 
    38489 > volume #20.1 level 0.220
    38490 
    38491 > volume #20.2 level 0.220
    38492 
    38493 > volume #20.3 level 0.230
    38494 
    38495 > volume #20.4 level 0.170
    38496 
    38497 > volume #23.* level 0.1
    38498 
    38499 > show #!1.2 models
    38500 
    38501 > show #!1.1 models
    38502 
    38503 > volume #1.1 level 0.015
    38504 
    38505 > hide #1.2
    38506 
    38507 > color #1.2/Y maroon
    38508 
    38509 > color #1.2/Z rebecca purple
    38510 
    38511 > color #1.2/a:2058-2064 cornflower blue
    38512 
    38513 > color #1.2/a:2447-2451 gold
    38514 
    38515 > color #1.2/a:2499-2506 green yellow
    38516 
    38517 > color #1.2/a:2499-2506 green yellow target c
    38518 
    38519 > color #1.2/a:2451 green target a
    38520 
    38521 > ~show #1.2
    38522 
    38523 > ~hbonds #1.2
    38524 
    38525 > name to_show #1.2/a:2058-2064,2499-2506,2447-2451/Y:73-76,101/Z:73-76,101
    38526 
    38527 > show to_show
    38528 
    38529 > ~cartoon #1.2
    38530 
    38531 > cartoon #1.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    38532 
    38533 > transparency #1.2 60 target c
    38534 
    38535 > hbonds to_show & sidechain restrict to_show & sidechain color white
    38536 
    38537 20 hydrogen bonds found 
    38538 
    38539 > volume #1.1 color black transparency 0.8
    38540 
    38541 > volume zone #1.1 nearAtoms #1.2/a:2058-2064,2499-2506,2447,2450,2451 &
    38542 > sideonly range 2
    38543 
    38544 > bond #1.2/Y:76@N3':101@C
    38545 
    38546 Created 0 bonds 
    38547 
    38548 > bond #1.2/Z:76@N3':101@C
    38549 
    38550 Created 0 bonds 
    38551 
    38552 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    38553 
    38554 > style #1.2/Y:101 ball
    38555 
    38556 Changed 8 atom styles 
    38557 
    38558 > style #1.2/Z:101 ball
    38559 
    38560 Changed 8 atom styles 
    38561 
    38562 > size #1.2/Y:101:76@N3' ballScale 0.10 stickRadius 0.06
    38563 
    38564 Changed 8 bond radii, 1 ball scales 
    38565 
    38566 > size #1.2/Z:101:76@N3' ballScale 0.10 stickRadius 0.06
    38567 
    38568 Changed 8 bond radii, 1 ball scales 
    38569 
    38570 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_8emm.png height
    38571 > 600 width 600 supersample 3
    38572 
    38573 > hide #!1.2 models
    38574 
    38575 > hide #!1.1 models
    38576 
    38577 > show #!1.7 models
    38578 
    38579 > show #!1.6 models
    38580 
    38581 > volume #1.6 level 0.01
    38582 
    38583 > hide #1.7
    38584 
    38585 > color #1.7/Y maroon
    38586 
    38587 > color #1.7/Z rebecca purple
    38588 
    38589 > color #1.7/a:2058-2064 cornflower blue
    38590 
    38591 > color #1.7/a:2447-2451 gold
    38592 
    38593 > color #1.7/a:2499-2506 green yellow
    38594 
    38595 > color #1.7/a:2499-2506 green yellow target c
    38596 
    38597 > color #1.7/a:2451 green target a
    38598 
    38599 > ~show #1.7
    38600 
    38601 > ~hbonds #1.7
    38602 
    38603 > name to_show #1.7/a:2058-2064,2499-2506,2447-2451/Y:73-76,101/Z:73-76,101
    38604 
    38605 > show to_show
    38606 
    38607 > ~cartoon #1.7
    38608 
    38609 > cartoon #1.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    38610 
    38611 > transparency #1.7 60 target c
    38612 
    38613 > hbonds to_show & sidechain restrict to_show & sidechain color white
    38614 
    38615 14 hydrogen bonds found 
    38616 
    38617 > volume #1.6 color black transparency 0.8
    38618 
    38619 > volume zone #1.6 nearAtoms #1.7/a:2058-2064,2499-2506,2447,2450,2451 &
    38620 > sideonly range 2
    38621 
    38622 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_8cgk.png height
    38623 > 600 width 600 supersample 3
    38624 
    38625 > hide #!1.7 models
    38626 
    38627 > hide #!1.6 models
    38628 
    38629 > show #!1.9 models
    38630 
    38631 > show #!1.8 models
    38632 
    38633 > volume #1.8 level 0.11
    38634 
    38635 > hide #1.9
    38636 
    38637 > color #1.9/Y maroon
    38638 
    38639 > color #1.9/Z rebecca purple
    38640 
    38641 > color #1.9/A:2058-2064 cornflower blue
    38642 
    38643 > color #1.9/A:2447-2451 gold
    38644 
    38645 > color #1.9/A:2499-2506 green yellow
    38646 
    38647 > color #1.9/A:2499-2506 green yellow target c
    38648 
    38649 > color #1.9/A:2451 green target a
    38650 
    38651 > ~show #1.9
    38652 
    38653 > ~hbonds #1.9
    38654 
    38655 > name to_show #1.9/A:2058-2064,2499-2506,2447-2451/Y:73-76,101/Z:73-76,101
    38656 
    38657 > show to_show
    38658 
    38659 > ~cartoon #1.9
    38660 
    38661 > cartoon #1.9/A:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    38662 
    38663 > transparency #1.9 60 target c
    38664 
    38665 > hbonds to_show & sidechain restrict to_show & sidechain color white
    38666 
    38667 7 hydrogen bonds found 
    38668 
    38669 > volume #1.8 color black transparency 0.8
    38670 
    38671 > volume zone #1.8 nearAtoms #1.9/A:2058-2064,2499-2506,2447,2450,2451 &
    38672 > sideonly range 2
    38673 
    38674 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_7bv8.png height
    38675 > 600 width 600 supersample 3
    38676 
    38677 > hide #!1.9 models
    38678 
    38679 > hide #!1.8 models
    38680 
    38681 > show #!1.11 models
    38682 
    38683 > show #!1.10 models
    38684 
    38685 > volume #1.10 level 0.025
    38686 
    38687 > hide #1.11
    38688 
    38689 > color #1.11/Y maroon
    38690 
    38691 > color #1.11/B8 rebecca purple
    38692 
    38693 > color #1.11/BA:2058-2064 cornflower blue
    38694 
    38695 > color #1.11/BA:2447-2451 gold
    38696 
    38697 > color #1.11/BA:2499-2506 green yellow
    38698 
    38699 > color #1.11/BA:2499-2506 green yellow target c
    38700 
    38701 > color #1.11/BA:2451 green target a
    38702 
    38703 > ~show #1.11
    38704 
    38705 > ~hbonds #1.11
    38706 
    38707 > name to_show #1.11/BA:2058-2064,2499-2506,2447-2451/Y:73-76,101/B8:73-76,101
    38708 
    38709 > show to_show
    38710 
    38711 > ~cartoon #1.11
    38712 
    38713 > cartoon #1.11/BA:2058-2064,2499-2506,2447-2451/Y:73-76/B8:73-76
    38714 
    38715 > transparency #1.11 60 target c
    38716 
    38717 > hbonds to_show & sidechain restrict to_show & sidechain color white
    38718 
    38719 17 hydrogen bonds found 
    38720 
    38721 > volume #1.10 color black transparency 0.8
    38722 
    38723 > volume zone #1.10 nearAtoms #1.11/BA:2058-2064,2499-2506,2447,2450,2451 &
    38724 > sideonly range 2
    38725 
    38726 > bond #1.11/B5:24@C/B8:76@O3'
    38727 
    38728 Created 0 bonds 
    38729 
    38730 > cartoon #1.11/B5
    38731 
    38732 > style #1.11/B5' ball
    38733 
    38734 Changed 0 atom styles 
    38735 
    38736 > size #1.11/B5/B8:76@O3' ballScale 0.10 stickRadius 0.06
    38737 
    38738 Changed 152 bond radii, 1 ball scales 
    38739 
    38740 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_7o1a.png height
    38741 > 600 width 600 supersample 3
    38742 
    38743 > hide #!1.11 models
    38744 
    38745 > hide #!1.10 models
    38746 
    38747 > show #!1.14 models
    38748 
    38749 > show #!1.13 models
    38750 
    38751 > volume #1.13 level 0.01
    38752 
    38753 > hide #1.14
    38754 
    38755 > color #1.14/Y maroon
    38756 
    38757 > color #1.14/Z rebecca purple
    38758 
    38759 > color #1.14/a:2058-2064 cornflower blue
    38760 
    38761 > color #1.14/a:2447-2451 gold
    38762 
    38763 > color #1.14/a:2499-2506 green yellow
    38764 
    38765 > color #1.14/a:2499-2506 green yellow target c
    38766 
    38767 > color #1.14/a:2451 green target a
    38768 
    38769 > ~show #1.14
    38770 
    38771 > ~hbonds #1.14
    38772 
    38773 > name to_show #1.14/a:2058-2064,2499-2506,2447-2451/Y:73-76,101/Z:73-76,101
    38774 
    38775 > show to_show
    38776 
    38777 > ~cartoon #1.14
    38778 
    38779 > cartoon #1.14/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    38780 
    38781 > transparency #1.14 60 target c
    38782 
    38783 > hbonds to_show & sidechain restrict to_show & sidechain color white
    38784 
    38785 13 hydrogen bonds found 
    38786 
    38787 > volume #1.13 color black transparency 0.8
    38788 
    38789 > volume zone #1.13 nearAtoms #1.14/a:2058-2064,2499-2506,2447,2450,2451 &
    38790 > sideonly range 2
    38791 
    38792 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_8cam.png height
    38793 > 600 width 600 supersample 3
    38794 
    38795 > hide #!1.14 models
    38796 
    38797 > hide #!1.13 models
    38798 
    38799 > show #!22.1 models
    38800 
    38801 > show #!21.1 models
    38802 
    38803 > volume #21.1 level 0.4
    38804 
    38805 > hide #22.1
    38806 
    38807 > color #22.1/Y maroon
    38808 
    38809 > color #22.1/Z rebecca purple
    38810 
    38811 > color #22.1/a:2058-2064 cornflower blue
    38812 
    38813 > color #22.1/a:2447-2451 gold
    38814 
    38815 > color #22.1/a:2499-2506 green yellow
    38816 
    38817 > color #22.1/a:2499-2506 green yellow target c
    38818 
    38819 > color #22.1/a:2451 green target a
    38820 
    38821 > ~show #22.1
    38822 
    38823 > ~hbonds #22.1
    38824 
    38825 > name to_show #22.1/a:2058-2064,2499-2506,2447-2451/Y:73-76,101/Z:73-76,101
    38826 
    38827 > show to_show
    38828 
    38829 > ~cartoon #22.1
    38830 
    38831 > cartoon #22.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    38832 
    38833 > transparency #22.1 60 target c
    38834 
    38835 > hbonds to_show & sidechain restrict to_show & sidechain color white
    38836 
    38837 15 hydrogen bonds found 
    38838 
    38839 > volume #21.1 color black transparency 0.8
    38840 
    38841 > volume zone #21.1 nearAtoms #22.1/a:2058-2064,2499-2506,2447,2450,2451 &
    38842 > sideonly range 2
    38843 
    38844 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J111_ape.png
    38845 > height 600 width 600 supersample 3
    38846 
    38847 > hide #!22.1 models
    38848 
    38849 > hide #!21.1 models
    38850 
    38851 > view name A2503_view4_map
    38852 
    38853 > show #!25.10 models
    38854 
    38855 > show #!23.10 models
    38856 
    38857 > volume #23.10 level 0.1
    38858 
    38859 > hide #25.10
    38860 
    38861 > color #25.10/Y maroon
    38862 
    38863 > color #25.10/Z rebecca purple
    38864 
    38865 > color #25.10/a:2058-2064 cornflower blue
    38866 
    38867 > color #25.10/a:2447-2451 gold
    38868 
    38869 > color #25.10/a:2499-2506 green yellow
    38870 
    38871 > color #25.10/a:2499-2506 green yellow target c
    38872 
    38873 > color #25.10/a:2451 green target a
    38874 
    38875 > ~show #25.10
    38876 
    38877 > ~hbonds #25.10
    38878 
    38879 > name to_show #25.10/a:2058-2064,2499-2506,2447-2451/Y:73-76,101/Z:73-76,101
    38880 
    38881 > show to_show
    38882 
    38883 > ~cartoon #25.10
    38884 
    38885 > cartoon #25.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    38886 
    38887 > transparency #25.10 60 target c
    38888 
    38889 > hbonds to_show & sidechain restrict to_show & sidechain color white
    38890 
    38891 18 hydrogen bonds found 
    38892 
    38893 > volume #23.10 color black transparency 0.8
    38894 
    38895 > volume zone #23.10 nearAtoms #25.10/a:2058-2064,2499-2506,2447,2450,2451 &
    38896 > sideonly range 2
    38897 
    38898 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J239_c0.png
    38899 > height 600 width 600 supersample 3
    38900 
    38901 > hide #!25.10 models
    38902 
    38903 > hide #!23.10 models
    38904 
    38905 > show #!25.10 models
    38906 
    38907 > show #!23.10 models
    38908 
    38909 > volume #23.10 level 0.1
    38910 
    38911 > hide #25.10
    38912 
    38913 > color #25.10/Y maroon
    38914 
    38915 > color #25.10/Z rebecca purple
    38916 
    38917 > color #25.10/a:2058-2064 cornflower blue
    38918 
    38919 > color #25.10/a:2447-2451 gold
    38920 
    38921 > color #25.10/a:2499-2506 green yellow
    38922 
    38923 > color #25.10/a:2499-2506 green yellow target c
    38924 
    38925 > color #25.10/a:2451 green target a
    38926 
    38927 > ~show #25.10
    38928 
    38929 > ~hbonds #25.10
    38930 
    38931 > name to_show #25.10/a:2058-2064,2499-2506,2447-2451/Y:73-76,101/Z:73-76,101
    38932 
    38933 > show to_show
    38934 
    38935 > ~cartoon #25.10
    38936 
    38937 > cartoon #25.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    38938 
    38939 > transparency #25.10 60 target c
    38940 
    38941 > hbonds to_show & sidechain restrict to_show & sidechain color white
    38942 
    38943 18 hydrogen bonds found 
    38944 
    38945 > volume #23.10 color black transparency 0.8
    38946 
    38947 > volume zone #23.10 nearAtoms #25.10/a:2058-2064,2499-2506,2447,2450,2451 &
    38948 > sideonly range 2
    38949 
    38950 > hide #!25.10 models
    38951 
    38952 > show #!25.10 models
    38953 
    38954 > hide #!25.10 models
    38955 
    38956 > show #!25.10 models
    38957 
    38958 > hide #!23.10 models
    38959 
    38960 > show #!23.10 models
    38961 
    38962 > hide #!23.10 models
    38963 
    38964 > show #!23.10 models
    38965 
    38966 > hide #!23.10 models
    38967 
    38968 > show #!23.10 models
    38969 
    38970 > hide #!23.10 models
    38971 
    38972 > show #!23.10 models
    38973 
    38974 > hide #!23.10 models
    38975 
    38976 > show #!23.10 models
    38977 
    38978 > hide #!23.10 models
    38979 
    38980 > hide #!25.10 models
    38981 
    38982 > show #!25.1 models
    38983 
    38984 > hide #!25.1 models
    38985 
    38986 > show #!25.1 models
    38987 
    38988 > show #!23.1 models
    38989 
    38990 > volume #23.1 level 0.1
    38991 
    38992 > hide #25.1
    38993 
    38994 > color #25.1/Y maroon
    38995 
    38996 > color #25.1/Z rebecca purple
    38997 
    38998 > color #25.1/a:2058-2064 cornflower blue
    38999 
    39000 > color #25.1/a:2447-2451 gold
    39001 
    39002 > color #25.1/a:2499-2506 green yellow
    39003 
    39004 > color #25.1/a:2499-2506 green yellow target c
    39005 
    39006 > color #25.1/a:2451 green target a
    39007 
    39008 > ~show #25.1
    39009 
    39010 > ~hbonds #25.1
    39011 
    39012 > name to_show #25.1/a:2058-2064,2499-2506,2447-2451/Y:73-76,101/Z:73-76,101
    39013 
    39014 > show to_show
    39015 
    39016 > ~cartoon #25.1
    39017 
    39018 > cartoon #25.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    39019 
    39020 > transparency #25.1 60 target c
    39021 
    39022 > hbonds to_show & sidechain restrict to_show & sidechain color white
    39023 
    39024 19 hydrogen bonds found 
    39025 
    39026 > volume #23.1 color black transparency 0.8
    39027 
    39028 > volume zone #23.1 nearAtoms #25.1/a:2058-2064,2499-2506,2447,2450,2451 &
    39029 > sideonly range 2
    39030 
    39031 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39032 > PTC/dEc0-J239-coot-2.pdb id 25.10 name dE_J239_c0
    39033 
    39034 Summary of feedback from opening
    39035 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc0-J239-coot-2.pdb 
    39036 --- 
    39037 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39038 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39039 6 
    39040 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39041 8 
    39042 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39043 23 
    39044 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39045 13 
    39046 320 messages similar to the above omitted 
    39047 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39048 -1 N LEU l 102 O LEU l 33 
    39049 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39050 0 
    39051 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39052 -1 N LYS l 133 O SER l 30 
    39053 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39054 0 
    39055 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39056 115 -1 N ILE m 113 O ILE m 34 
    39057 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39058 103 -1 N CYS m 100 O MET m 110 
    39059 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39060 0 
    39061 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39062 -1 N VAL n 39 O VAL n 49 
    39063 55 messages similar to the above omitted 
    39064 Cannot find LINK/SSBOND residue ZN (101 ) 
    39065 Cannot find LINK/SSBOND residue ZN (101 ) 
    39066 Cannot find LINK/SSBOND residue ZN (101 ) 
    39067 Cannot find LINK/SSBOND residue ZN (101 ) 
    39068  
    39069 Chain information for dE_J239_c0 #7 
    39070 --- 
    39071 Chain | Description 
    39072 3 | No description available 
    39073 Y | No description available 
    39074 Z | No description available 
    39075 a | No description available 
    39076 b | No description available 
    39077 c | No description available 
    39078 e | No description available 
    39079 l | No description available 
    39080 v | No description available 
    39081  
    39082 
    39083 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39084 > PTC/dEc1-J240-coot-2.pdb id 25.1 name dE_J240_c1
    39085 
    39086 Summary of feedback from opening
    39087 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc1-J240-coot-2.pdb 
    39088 --- 
    39089 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39090 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39091 6 
    39092 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39093 8 
    39094 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39095 23 
    39096 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39097 13 
    39098 320 messages similar to the above omitted 
    39099 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39100 -1 N LEU l 102 O LEU l 33 
    39101 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39102 0 
    39103 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39104 -1 N LYS l 133 O SER l 30 
    39105 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39106 0 
    39107 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39108 115 -1 N ILE m 113 O ILE m 34 
    39109 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39110 103 -1 N CYS m 100 O MET m 110 
    39111 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39112 0 
    39113 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39114 -1 N VAL n 39 O VAL n 49 
    39115 55 messages similar to the above omitted 
    39116 Cannot find LINK/SSBOND residue ZN (101 ) 
    39117 Cannot find LINK/SSBOND residue ZN (101 ) 
    39118 Cannot find LINK/SSBOND residue ZN (101 ) 
    39119 Cannot find LINK/SSBOND residue ZN (101 ) 
    39120  
    39121 Chain information for dE_J240_c1 #7 
    39122 --- 
    39123 Chain | Description 
    39124 3 | No description available 
    39125 Y | No description available 
    39126 Z | No description available 
    39127 a | No description available 
    39128 b | No description available 
    39129 c | No description available 
    39130 e | No description available 
    39131 l | No description available 
    39132 v | No description available 
    39133  
    39134 
    39135 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39136 > PTC/dEc2-J241-coot-2.pdb id 25.2 name dE_J241_c2
    39137 
    39138 Summary of feedback from opening
    39139 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc2-J241-coot-2.pdb 
    39140 --- 
    39141 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39142 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39143 6 
    39144 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39145 8 
    39146 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39147 23 
    39148 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39149 13 
    39150 320 messages similar to the above omitted 
    39151 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39152 -1 N LEU l 102 O LEU l 33 
    39153 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39154 0 
    39155 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39156 -1 N LYS l 133 O SER l 30 
    39157 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39158 0 
    39159 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39160 115 -1 N ILE m 113 O ILE m 34 
    39161 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39162 103 -1 N CYS m 100 O MET m 110 
    39163 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39164 0 
    39165 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39166 -1 N VAL n 39 O VAL n 49 
    39167 55 messages similar to the above omitted 
    39168 Cannot find LINK/SSBOND residue ZN (101 ) 
    39169 Cannot find LINK/SSBOND residue ZN (101 ) 
    39170 Cannot find LINK/SSBOND residue ZN (101 ) 
    39171 Cannot find LINK/SSBOND residue ZN (101 ) 
    39172  
    39173 Chain information for dE_J241_c2 #7 
    39174 --- 
    39175 Chain | Description 
    39176 3 | No description available 
    39177 Y | No description available 
    39178 Z | No description available 
    39179 a | No description available 
    39180 b | No description available 
    39181 c | No description available 
    39182 e | No description available 
    39183 l | No description available 
    39184 v | No description available 
    39185  
    39186 
    39187 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39188 > PTC/dEc3-J242-coot-2.pdb id 25.3 name dE_J242_c3
    39189 
    39190 No such file/path: /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39191 PTC/dEc3-J242-coot-2.pdb 
    39192 
    39193 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39194 > PTC/dEc5-J244-coot-2.pdb id 25.5 name dE_J244_c5
    39195 
    39196 Summary of feedback from opening
    39197 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc5-J244-coot-2.pdb 
    39198 --- 
    39199 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39200 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39201 6 
    39202 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39203 8 
    39204 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39205 23 
    39206 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39207 13 
    39208 320 messages similar to the above omitted 
    39209 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39210 -1 N LEU l 102 O LEU l 33 
    39211 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39212 0 
    39213 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39214 -1 N LYS l 133 O SER l 30 
    39215 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39216 0 
    39217 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39218 115 -1 N ILE m 113 O ILE m 34 
    39219 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39220 103 -1 N CYS m 100 O MET m 110 
    39221 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39222 0 
    39223 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39224 -1 N VAL n 39 O VAL n 49 
    39225 55 messages similar to the above omitted 
    39226 Cannot find LINK/SSBOND residue ZN (101 ) 
    39227 Cannot find LINK/SSBOND residue ZN (101 ) 
    39228 Cannot find LINK/SSBOND residue ZN (101 ) 
    39229 Cannot find LINK/SSBOND residue ZN (101 ) 
    39230  
    39231 Chain information for dE_J244_c5 #7 
    39232 --- 
    39233 Chain | Description 
    39234 3 | No description available 
    39235 Y | No description available 
    39236 Z | No description available 
    39237 a | No description available 
    39238 b | No description available 
    39239 c | No description available 
    39240 e | No description available 
    39241 l | No description available 
    39242 v | No description available 
    39243  
    39244 
    39245 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39246 > PTC/dEc6-J245-coot-2.pdb id 25.6 name dE_J245_c6
    39247 
    39248 Summary of feedback from opening
    39249 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc6-J245-coot-2.pdb 
    39250 --- 
    39251 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39252 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39253 6 
    39254 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39255 8 
    39256 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39257 23 
    39258 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39259 13 
    39260 320 messages similar to the above omitted 
    39261 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39262 -1 N LEU l 102 O LEU l 33 
    39263 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39264 0 
    39265 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39266 -1 N LYS l 133 O SER l 30 
    39267 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39268 0 
    39269 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39270 115 -1 N ILE m 113 O ILE m 34 
    39271 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39272 103 -1 N CYS m 100 O MET m 110 
    39273 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39274 0 
    39275 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39276 -1 N VAL n 39 O VAL n 49 
    39277 55 messages similar to the above omitted 
    39278 Cannot find LINK/SSBOND residue ZN (101 ) 
    39279 Cannot find LINK/SSBOND residue ZN (101 ) 
    39280 Cannot find LINK/SSBOND residue ZN (101 ) 
    39281 Cannot find LINK/SSBOND residue ZN (101 ) 
    39282  
    39283 Chain information for dE_J245_c6 #7 
    39284 --- 
    39285 Chain | Description 
    39286 3 | No description available 
    39287 Z | No description available 
    39288 a | No description available 
    39289 b | No description available 
    39290 c | No description available 
    39291 e | No description available 
    39292 l | No description available 
    39293 v | No description available 
    39294  
    39295 
    39296 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39297 > PTC/dEc7-J246-coot-2.pdb id 25.7 name dE_J246_c7
    39298 
    39299 Summary of feedback from opening
    39300 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc7-J246-coot-2.pdb 
    39301 --- 
    39302 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39303 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39304 6 
    39305 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39306 8 
    39307 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39308 23 
    39309 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39310 13 
    39311 320 messages similar to the above omitted 
    39312 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39313 -1 N LEU l 102 O LEU l 33 
    39314 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39315 0 
    39316 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39317 -1 N LYS l 133 O SER l 30 
    39318 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39319 0 
    39320 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39321 115 -1 N ILE m 113 O ILE m 34 
    39322 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39323 103 -1 N CYS m 100 O MET m 110 
    39324 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39325 0 
    39326 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39327 -1 N VAL n 39 O VAL n 49 
    39328 55 messages similar to the above omitted 
    39329 Cannot find LINK/SSBOND residue ZN (101 ) 
    39330 Cannot find LINK/SSBOND residue ZN (101 ) 
    39331 Cannot find LINK/SSBOND residue ZN (101 ) 
    39332 Cannot find LINK/SSBOND residue ZN (101 ) 
    39333  
    39334 Chain information for dE_J246_c7 #7 
    39335 --- 
    39336 Chain | Description 
    39337 3 | No description available 
    39338 Y | No description available 
    39339 Z | No description available 
    39340 a | No description available 
    39341 b | No description available 
    39342 c | No description available 
    39343 e | No description available 
    39344 l | No description available 
    39345 v | No description available 
    39346  
    39347 
    39348 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39349 > PTC/dEc8-J247-coot-2.pdb id 25.8 name dE_J247_c8
    39350 
    39351 Summary of feedback from opening
    39352 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc8-J247-coot-2.pdb 
    39353 --- 
    39354 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39355 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39356 6 
    39357 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39358 8 
    39359 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39360 23 
    39361 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39362 13 
    39363 320 messages similar to the above omitted 
    39364 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39365 -1 N LEU l 102 O LEU l 33 
    39366 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39367 0 
    39368 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39369 -1 N LYS l 133 O SER l 30 
    39370 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39371 0 
    39372 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39373 115 -1 N ILE m 113 O ILE m 34 
    39374 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39375 103 -1 N CYS m 100 O MET m 110 
    39376 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39377 0 
    39378 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39379 -1 N VAL n 39 O VAL n 49 
    39380 55 messages similar to the above omitted 
    39381 Cannot find LINK/SSBOND residue ZN (101 ) 
    39382 Cannot find LINK/SSBOND residue ZN (101 ) 
    39383 Cannot find LINK/SSBOND residue ZN (101 ) 
    39384 Cannot find LINK/SSBOND residue ZN (101 ) 
    39385  
    39386 Chain information for dE_J247_c8 #7 
    39387 --- 
    39388 Chain | Description 
    39389 3 | No description available 
    39390 Z | No description available 
    39391 a | No description available 
    39392 b | No description available 
    39393 c | No description available 
    39394 e | No description available 
    39395 l | No description available 
    39396 v | No description available 
    39397  
    39398 
    39399 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39400 > PTC/dEc9-J248-coot-2.pdb id 25.9 name dE_J248_c9
    39401 
    39402 Summary of feedback from opening
    39403 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc9-J248-coot-2.pdb 
    39404 --- 
    39405 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39406 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39407 6 
    39408 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39409 8 
    39410 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39411 23 
    39412 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39413 13 
    39414 320 messages similar to the above omitted 
    39415 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39416 -1 N LEU l 102 O LEU l 33 
    39417 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39418 0 
    39419 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39420 -1 N LYS l 133 O SER l 30 
    39421 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39422 0 
    39423 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39424 115 -1 N ILE m 113 O ILE m 34 
    39425 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39426 103 -1 N CYS m 100 O MET m 110 
    39427 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39428 0 
    39429 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39430 -1 N VAL n 39 O VAL n 49 
    39431 55 messages similar to the above omitted 
    39432 Cannot find LINK/SSBOND residue ZN (101 ) 
    39433 Cannot find LINK/SSBOND residue ZN (101 ) 
    39434 Cannot find LINK/SSBOND residue ZN (101 ) 
    39435 Cannot find LINK/SSBOND residue ZN (101 ) 
    39436  
    39437 Chain information for dE_J248_c9 #7 
    39438 --- 
    39439 Chain | Description 
    39440 3 | No description available 
    39441 Y | No description available 
    39442 Z | No description available 
    39443 a | No description available 
    39444 b | No description available 
    39445 c | No description available 
    39446 e | No description available 
    39447 l | No description available 
    39448 v | No description available 
    39449  
    39450 
    39451 > close #25.1-2,5-10
    39452 
    39453 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39454 > PTC/dEc0-J239-coot-2.pdb id 25.10 name dE_J239_c0
    39455 
    39456 Summary of feedback from opening
    39457 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc0-J239-coot-2.pdb 
    39458 --- 
    39459 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39460 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39461 6 
    39462 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39463 8 
    39464 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39465 23 
    39466 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39467 13 
    39468 320 messages similar to the above omitted 
    39469 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39470 -1 N LEU l 102 O LEU l 33 
    39471 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39472 0 
    39473 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39474 -1 N LYS l 133 O SER l 30 
    39475 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39476 0 
    39477 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39478 115 -1 N ILE m 113 O ILE m 34 
    39479 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39480 103 -1 N CYS m 100 O MET m 110 
    39481 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39482 0 
    39483 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39484 -1 N VAL n 39 O VAL n 49 
    39485 55 messages similar to the above omitted 
    39486 Cannot find LINK/SSBOND residue ZN (101 ) 
    39487 Cannot find LINK/SSBOND residue ZN (101 ) 
    39488 Cannot find LINK/SSBOND residue ZN (101 ) 
    39489 Cannot find LINK/SSBOND residue ZN (101 ) 
    39490  
    39491 Chain information for dE_J239_c0 #7 
    39492 --- 
    39493 Chain | Description 
    39494 3 | No description available 
    39495 Y | No description available 
    39496 Z | No description available 
    39497 a | No description available 
    39498 b | No description available 
    39499 c | No description available 
    39500 e | No description available 
    39501 l | No description available 
    39502 v | No description available 
    39503  
    39504 
    39505 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39506 > PTC/dEc1-J240-coot-2.pdb id 25.1 name dE_J240_c1
    39507 
    39508 Summary of feedback from opening
    39509 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc1-J240-coot-2.pdb 
    39510 --- 
    39511 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39512 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39513 6 
    39514 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39515 8 
    39516 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39517 23 
    39518 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39519 13 
    39520 320 messages similar to the above omitted 
    39521 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39522 -1 N LEU l 102 O LEU l 33 
    39523 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39524 0 
    39525 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39526 -1 N LYS l 133 O SER l 30 
    39527 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39528 0 
    39529 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39530 115 -1 N ILE m 113 O ILE m 34 
    39531 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39532 103 -1 N CYS m 100 O MET m 110 
    39533 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39534 0 
    39535 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39536 -1 N VAL n 39 O VAL n 49 
    39537 55 messages similar to the above omitted 
    39538 Cannot find LINK/SSBOND residue ZN (101 ) 
    39539 Cannot find LINK/SSBOND residue ZN (101 ) 
    39540 Cannot find LINK/SSBOND residue ZN (101 ) 
    39541 Cannot find LINK/SSBOND residue ZN (101 ) 
    39542  
    39543 Chain information for dE_J240_c1 #7 
    39544 --- 
    39545 Chain | Description 
    39546 3 | No description available 
    39547 Y | No description available 
    39548 Z | No description available 
    39549 a | No description available 
    39550 b | No description available 
    39551 c | No description available 
    39552 e | No description available 
    39553 l | No description available 
    39554 v | No description available 
    39555  
    39556 
    39557 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39558 > PTC/dEc2-J241-coot-2.pdb id 25.2 name dE_J241_c2
    39559 
    39560 Summary of feedback from opening
    39561 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc2-J241-coot-2.pdb 
    39562 --- 
    39563 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39564 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39565 6 
    39566 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39567 8 
    39568 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39569 23 
    39570 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39571 13 
    39572 320 messages similar to the above omitted 
    39573 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39574 -1 N LEU l 102 O LEU l 33 
    39575 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39576 0 
    39577 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39578 -1 N LYS l 133 O SER l 30 
    39579 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39580 0 
    39581 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39582 115 -1 N ILE m 113 O ILE m 34 
    39583 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39584 103 -1 N CYS m 100 O MET m 110 
    39585 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39586 0 
    39587 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39588 -1 N VAL n 39 O VAL n 49 
    39589 55 messages similar to the above omitted 
    39590 Cannot find LINK/SSBOND residue ZN (101 ) 
    39591 Cannot find LINK/SSBOND residue ZN (101 ) 
    39592 Cannot find LINK/SSBOND residue ZN (101 ) 
    39593 Cannot find LINK/SSBOND residue ZN (101 ) 
    39594  
    39595 Chain information for dE_J241_c2 #7 
    39596 --- 
    39597 Chain | Description 
    39598 3 | No description available 
    39599 Y | No description available 
    39600 Z | No description available 
    39601 a | No description available 
    39602 b | No description available 
    39603 c | No description available 
    39604 e | No description available 
    39605 l | No description available 
    39606 v | No description available 
    39607  
    39608 
    39609 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39610 > PTC/dEc3-J242-coot-2.pdb id 25.3 name dE_J242_c3
    39611 
    39612 No such file/path: /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39613 PTC/dEc3-J242-coot-2.pdb 
    39614 
    39615 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39616 > PTC/dEc5-J244-coot-2.pdb id 25.5 name dE_J244_c5
    39617 
    39618 Summary of feedback from opening
    39619 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc5-J244-coot-2.pdb 
    39620 --- 
    39621 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39622 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39623 6 
    39624 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39625 8 
    39626 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39627 23 
    39628 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39629 13 
    39630 320 messages similar to the above omitted 
    39631 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39632 -1 N LEU l 102 O LEU l 33 
    39633 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39634 0 
    39635 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39636 -1 N LYS l 133 O SER l 30 
    39637 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39638 0 
    39639 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39640 115 -1 N ILE m 113 O ILE m 34 
    39641 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39642 103 -1 N CYS m 100 O MET m 110 
    39643 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39644 0 
    39645 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39646 -1 N VAL n 39 O VAL n 49 
    39647 55 messages similar to the above omitted 
    39648 Cannot find LINK/SSBOND residue ZN (101 ) 
    39649 Cannot find LINK/SSBOND residue ZN (101 ) 
    39650 Cannot find LINK/SSBOND residue ZN (101 ) 
    39651 Cannot find LINK/SSBOND residue ZN (101 ) 
    39652  
    39653 Chain information for dE_J244_c5 #7 
    39654 --- 
    39655 Chain | Description 
    39656 3 | No description available 
    39657 Y | No description available 
    39658 Z | No description available 
    39659 a | No description available 
    39660 b | No description available 
    39661 c | No description available 
    39662 e | No description available 
    39663 l | No description available 
    39664 v | No description available 
    39665  
    39666 
    39667 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39668 > PTC/dEc6-J245-coot-2.pdb id 25.6 name dE_J245_c6
    39669 
    39670 Summary of feedback from opening
    39671 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc6-J245-coot-2.pdb 
    39672 --- 
    39673 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39674 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39675 6 
    39676 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39677 8 
    39678 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39679 23 
    39680 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39681 13 
    39682 320 messages similar to the above omitted 
    39683 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39684 -1 N LEU l 102 O LEU l 33 
    39685 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39686 0 
    39687 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39688 -1 N LYS l 133 O SER l 30 
    39689 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39690 0 
    39691 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39692 115 -1 N ILE m 113 O ILE m 34 
    39693 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39694 103 -1 N CYS m 100 O MET m 110 
    39695 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39696 0 
    39697 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39698 -1 N VAL n 39 O VAL n 49 
    39699 55 messages similar to the above omitted 
    39700 Cannot find LINK/SSBOND residue ZN (101 ) 
    39701 Cannot find LINK/SSBOND residue ZN (101 ) 
    39702 Cannot find LINK/SSBOND residue ZN (101 ) 
    39703 Cannot find LINK/SSBOND residue ZN (101 ) 
    39704  
    39705 Chain information for dE_J245_c6 #7 
    39706 --- 
    39707 Chain | Description 
    39708 3 | No description available 
    39709 Z | No description available 
    39710 a | No description available 
    39711 b | No description available 
    39712 c | No description available 
    39713 e | No description available 
    39714 l | No description available 
    39715 v | No description available 
    39716  
    39717 
    39718 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39719 > PTC/dEc7-J246-coot-2.pdb id 25.7 name dE_J246_c7
    39720 
    39721 Summary of feedback from opening
    39722 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc7-J246-coot-2.pdb 
    39723 --- 
    39724 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39725 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39726 6 
    39727 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39728 8 
    39729 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39730 23 
    39731 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39732 13 
    39733 320 messages similar to the above omitted 
    39734 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39735 -1 N LEU l 102 O LEU l 33 
    39736 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39737 0 
    39738 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39739 -1 N LYS l 133 O SER l 30 
    39740 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39741 0 
    39742 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39743 115 -1 N ILE m 113 O ILE m 34 
    39744 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39745 103 -1 N CYS m 100 O MET m 110 
    39746 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39747 0 
    39748 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39749 -1 N VAL n 39 O VAL n 49 
    39750 55 messages similar to the above omitted 
    39751 Cannot find LINK/SSBOND residue ZN (101 ) 
    39752 Cannot find LINK/SSBOND residue ZN (101 ) 
    39753 Cannot find LINK/SSBOND residue ZN (101 ) 
    39754 Cannot find LINK/SSBOND residue ZN (101 ) 
    39755  
    39756 Chain information for dE_J246_c7 #7 
    39757 --- 
    39758 Chain | Description 
    39759 3 | No description available 
    39760 Y | No description available 
    39761 Z | No description available 
    39762 a | No description available 
    39763 b | No description available 
    39764 c | No description available 
    39765 e | No description available 
    39766 l | No description available 
    39767 v | No description available 
    39768  
    39769 
    39770 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39771 > PTC/dEc8-J247-coot-2.pdb id 25.8 name dE_J247_c8
    39772 
    39773 Summary of feedback from opening
    39774 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc8-J247-coot-2.pdb 
    39775 --- 
    39776 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39777 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39778 6 
    39779 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39780 8 
    39781 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39782 23 
    39783 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39784 13 
    39785 320 messages similar to the above omitted 
    39786 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39787 -1 N LEU l 102 O LEU l 33 
    39788 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39789 0 
    39790 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39791 -1 N LYS l 133 O SER l 30 
    39792 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39793 0 
    39794 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39795 115 -1 N ILE m 113 O ILE m 34 
    39796 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39797 103 -1 N CYS m 100 O MET m 110 
    39798 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39799 0 
    39800 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39801 -1 N VAL n 39 O VAL n 49 
    39802 55 messages similar to the above omitted 
    39803 Cannot find LINK/SSBOND residue ZN (101 ) 
    39804 Cannot find LINK/SSBOND residue ZN (101 ) 
    39805 Cannot find LINK/SSBOND residue ZN (101 ) 
    39806 Cannot find LINK/SSBOND residue ZN (101 ) 
    39807  
    39808 Chain information for dE_J247_c8 #7 
    39809 --- 
    39810 Chain | Description 
    39811 3 | No description available 
    39812 Z | No description available 
    39813 a | No description available 
    39814 b | No description available 
    39815 c | No description available 
    39816 e | No description available 
    39817 l | No description available 
    39818 v | No description available 
    39819  
    39820 
    39821 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    39822 > PTC/dEc9-J248-coot-2.pdb id 25.9 name dE_J248_c9
    39823 
    39824 Summary of feedback from opening
    39825 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc9-J248-coot-2.pdb 
    39826 --- 
    39827 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    39828 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    39829 6 
    39830 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    39831 8 
    39832 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    39833 23 
    39834 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    39835 13 
    39836 320 messages similar to the above omitted 
    39837 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    39838 -1 N LEU l 102 O LEU l 33 
    39839 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    39840 0 
    39841 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    39842 -1 N LYS l 133 O SER l 30 
    39843 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    39844 0 
    39845 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    39846 115 -1 N ILE m 113 O ILE m 34 
    39847 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    39848 103 -1 N CYS m 100 O MET m 110 
    39849 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    39850 0 
    39851 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    39852 -1 N VAL n 39 O VAL n 49 
    39853 55 messages similar to the above omitted 
    39854 Cannot find LINK/SSBOND residue ZN (101 ) 
    39855 Cannot find LINK/SSBOND residue ZN (101 ) 
    39856 Cannot find LINK/SSBOND residue ZN (101 ) 
    39857 Cannot find LINK/SSBOND residue ZN (101 ) 
    39858  
    39859 Chain information for dE_J248_c9 #7 
    39860 --- 
    39861 Chain | Description 
    39862 3 | No description available 
    39863 Y | No description available 
    39864 Z | No description available 
    39865 a | No description available 
    39866 b | No description available 
    39867 c | No description available 
    39868 e | No description available 
    39869 l | No description available 
    39870 v | No description available 
    39871  
    39872 
    39873 > rename #25 dE-PTC-models
    39874 
    39875 > style #!25.1-2,5-10 stick
    39876 
    39877 Changed 82404 atom styles 
    39878 
    39879 > show #!25.1 models
    39880 
    39881 > show #!23.1 models
    39882 
    39883 > volume #23.1 level 0.1
    39884 
    39885 > hide #25.1
    39886 
    39887 > color #25.1/Y maroon
    39888 
    39889 > color #25.1/Z rebecca purple
    39890 
    39891 > color #25.1/a:2058-2064 cornflower blue
    39892 
    39893 > color #25.1/a:2447-2451 gold
    39894 
    39895 > color #25.1/a:2499-2506 green yellow
    39896 
    39897 > color #25.1/a:2499-2506 green yellow target c
    39898 
    39899 > color #25.1/a:2451 green target a
    39900 
    39901 > ~show #25.1
    39902 
    39903 > ~hbonds #25.1
    39904 
    39905 > name to_show #25.1/a:2058-2064,2499-2506,2447-2451/Y:73-76,101/Z:73-76,101
    39906 
    39907 > show to_show
    39908 
    39909 > ~cartoon #25.1
    39910 
    39911 > cartoon #25.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    39912 
    39913 > transparency #25.1 60 target c
    39914 
    39915 > hbonds to_show & sidechain restrict to_show & sidechain color white
    39916 
    39917 20 hydrogen bonds found 
    39918 
    39919 > volume #23.1 color black transparency 0.8
    39920 
    39921 > volume zone #23.1 nearAtoms #25.1/a:2058-2064,2499-2506,2447,2450,2451 &
    39922 > sideonly range 2
    39923 
    39924 > hide #!25.10 models
    39925 
    39926 > hide #!25.9 models
    39927 
    39928 > hide #!25.8 models
    39929 
    39930 > hide #!25.7 models
    39931 
    39932 > hide #!25.6 models
    39933 
    39934 > hide #!25.5 models
    39935 
    39936 > hide #!25.2 models
    39937 
    39938 > view A2503_view4_map
    39939 
    39940 > show #!25.1 models
    39941 
    39942 > show #!23.1 models
    39943 
    39944 > volume #23.1 level 0.1
    39945 
    39946 > hide #25.1
    39947 
    39948 > color #25.1/Y maroon
    39949 
    39950 > color #25.1/Z rebecca purple
    39951 
    39952 > color #25.1/a:2058-2064 cornflower blue
    39953 
    39954 > color #25.1/a:2447-2451 gold
    39955 
    39956 > color #25.1/a:2499-2506 green yellow
    39957 
    39958 > color #25.1/a:2499-2506 green yellow target c
    39959 
    39960 > color #25.1/a:2451 green target a
    39961 
    39962 > ~show #25.1
    39963 
    39964 > ~hbonds #25.1
    39965 
    39966 > name to_show
    39967 > #25.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    39968 
    39969 > show to_show
    39970 
    39971 > ~cartoon #25.1
    39972 
    39973 > cartoon #25.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    39974 
    39975 > transparency #25.1 60 target c
    39976 
    39977 > hbonds to_show & sidechain restrict to_show & sidechain color white
    39978 
    39979 19 hydrogen bonds found 
    39980 
    39981 > volume #23.1 color black transparency 0.8
    39982 
    39983 > volume zone #23.1 nearAtoms #25.1/a:2058-2064,2499-2506,2447,2450,2451 &
    39984 > sideonly range 2
    39985 
    39986 > show #!25.1 models
    39987 
    39988 > show #!23.1 models
    39989 
    39990 > volume #23.1 level 0.1
    39991 
    39992 > hide #25.1
    39993 
    39994 > color #25.1/Y maroon
    39995 
    39996 > color #25.1/Z rebecca purple
    39997 
    39998 > color #25.1/a:2058-2064 cornflower blue
    39999 
    40000 > color #25.1/a:2447-2451 gold
    40001 
    40002 > color #25.1/a:2499-2506 green yellow
    40003 
    40004 > color #25.1/a:2499-2506 green yellow target c
    40005 
    40006 > color #25.1/a:2451 green target a
    40007 
    40008 > ~show #25.1
    40009 
    40010 > ~hbonds #25.1
    40011 
    40012 > name to_show
    40013 > #25.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    40014 
    40015 > show to_show
    40016 
    40017 > ~cartoon #25.1
    40018 
    40019 > cartoon #25.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    40020 
    40021 > transparency #25.1 60 target c
    40022 
    40023 > volume #23.1 color black transparency 0.8
    40024 
    40025 > volume zone #23.1 nearAtoms #25.1/a:2058-2064,2499-2506,2447,2450,2451 &
    40026 > sideonly range 2
    40027 
    40028 > hide #25.1.3 models
    40029 
    40030 > view name A2503_view5_map
    40031 
    40032 > view matrix
    40033 
    40034 view matrix camera
    40035 0.55391,-0.67025,0.49391,180.67,-0.81164,-0.5669,0.14092,201.9,0.18555,-0.47892,-0.85802,74.923 
    40036 view matrix models
    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#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0 
    40038  
    40039 
    40040 > clip list
    40041 
    40042 Using 2 clip planes: 
    40043 near offset -22.244, axis -0.494,-0.141,0.858, point 155,195.3,115.3) 
    40044 far offset 11.29, axis 0.494,0.141,-0.858, point 138.4,190.6,144.1) 
    40045 
    40046 Cell requested for row 120 is out of bounds for table with 132 rows! Resizing
    40047 table model. 
    40048 
    40049 > close #25.2
    40050 
    40051 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    40052 > PTC/dEc2-J241-coot-3.pdb id 25.2 name dE_J241_c2
    40053 
    40054 Summary of feedback from opening
    40055 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc2-J241-coot-3.pdb 
    40056 --- 
    40057 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    40058 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    40059 6 
    40060 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    40061 8 
    40062 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    40063 23 
    40064 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    40065 13 
    40066 320 messages similar to the above omitted 
    40067 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    40068 -1 N LEU l 102 O LEU l 33 
    40069 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    40070 0 
    40071 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    40072 -1 N LYS l 133 O SER l 30 
    40073 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    40074 0 
    40075 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    40076 115 -1 N ILE m 113 O ILE m 34 
    40077 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    40078 103 -1 N CYS m 100 O MET m 110 
    40079 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    40080 0 
    40081 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    40082 -1 N VAL n 39 O VAL n 49 
    40083 55 messages similar to the above omitted 
    40084 Cannot find LINK/SSBOND residue ZN (101 ) 
    40085 Cannot find LINK/SSBOND residue ZN (101 ) 
    40086 Cannot find LINK/SSBOND residue ZN (101 ) 
    40087 Cannot find LINK/SSBOND residue ZN (101 ) 
    40088  
    40089 Chain information for dE_J241_c2 #7 
    40090 --- 
    40091 Chain | Description 
    40092 3 | No description available 
    40093 Y | No description available 
    40094 Z | No description available 
    40095 a | No description available 
    40096 b | No description available 
    40097 c | No description available 
    40098 e | No description available 
    40099 l | No description available 
    40100 v | No description available 
    40101  
    40102 
    40103 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    40104 > PTC/dEc4-J243-coot-2.pdb id 25.4 name dE_J243_c4
    40105 
    40106 Summary of feedback from opening
    40107 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc4-J243-coot-2.pdb 
    40108 --- 
    40109 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    40110 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    40111 6 
    40112 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    40113 8 
    40114 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    40115 23 
    40116 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    40117 13 
    40118 320 messages similar to the above omitted 
    40119 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    40120 -1 N LEU l 102 O LEU l 33 
    40121 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    40122 0 
    40123 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    40124 -1 N LYS l 133 O SER l 30 
    40125 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    40126 0 
    40127 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    40128 115 -1 N ILE m 113 O ILE m 34 
    40129 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    40130 103 -1 N CYS m 100 O MET m 110 
    40131 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    40132 0 
    40133 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    40134 -1 N VAL n 39 O VAL n 49 
    40135 55 messages similar to the above omitted 
    40136 Cannot find LINK/SSBOND residue ZN (101 ) 
    40137 Cannot find LINK/SSBOND residue ZN (101 ) 
    40138 Cannot find LINK/SSBOND residue ZN (101 ) 
    40139 Cannot find LINK/SSBOND residue ZN (101 ) 
    40140  
    40141 Chain information for dE_J243_c4 #7 
    40142 --- 
    40143 Chain | Description 
    40144 3 | No description available 
    40145 Y | No description available 
    40146 Z | No description available 
    40147 a | No description available 
    40148 b | No description available 
    40149 c | No description available 
    40150 e | No description available 
    40151 l | No description available 
    40152 v | No description available 
    40153  
    40154 
    40155 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    40156 > PTC/dEc3-J242-coot-2.pdb id 25.3 name dE_J242_c3
    40157 
    40158 Summary of feedback from opening
    40159 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-PTC/dEc3-J242-coot-2.pdb 
    40160 --- 
    40161 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    40162 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    40163 6 
    40164 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    40165 8 
    40166 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    40167 23 
    40168 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    40169 13 
    40170 320 messages similar to the above omitted 
    40171 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    40172 -1 N LEU l 102 O LEU l 33 
    40173 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    40174 0 
    40175 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    40176 -1 N LYS l 133 O SER l 30 
    40177 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    40178 0 
    40179 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    40180 115 -1 N ILE m 113 O ILE m 34 
    40181 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    40182 103 -1 N CYS m 100 O MET m 110 
    40183 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    40184 0 
    40185 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    40186 -1 N VAL n 39 O VAL n 49 
    40187 55 messages similar to the above omitted 
    40188 Cannot find LINK/SSBOND residue ZN (101 ) 
    40189 Cannot find LINK/SSBOND residue ZN (101 ) 
    40190 Cannot find LINK/SSBOND residue ZN (101 ) 
    40191 Cannot find LINK/SSBOND residue ZN (101 ) 
    40192  
    40193 Chain information for dE_J242_c3 #7 
    40194 --- 
    40195 Chain | Description 
    40196 3 | No description available 
    40197 Z | No description available 
    40198 a | No description available 
    40199 b | No description available 
    40200 c | No description available 
    40201 e | No description available 
    40202 l | No description available 
    40203 v | No description available 
    40204  
    40205 
    40206 > show #!25.1-4 atoms
    40207 
    40208 [Repeated 1 time(s)]
    40209 
    40210 > style #!25.1-4 stick
    40211 
    40212 Changed 41246 atom styles 
    40213 
    40214 > hide #!25.2 models
    40215 
    40216 > hide #!25.3 models
    40217 
    40218 > hide #!25.4 models
    40219 
    40220 > hide #!25.1 models
    40221 
    40222 > show #!25.2 models
    40223 
    40224 > hide #!25.2 models
    40225 
    40226 > show #!25.3 models
    40227 
    40228 > hide #!25.3 models
    40229 
    40230 > show #!25.4 models
    40231 
    40232 > hide #!25.4 models
    40233 
    40234 > show #!25.1 models
    40235 
    40236 > show #!25.2 models
    40237 
    40238 > hide #!25.1 models
    40239 
    40240 > show #!25.1 models
    40241 
    40242 > hide #!25.2 models
    40243 
    40244 > hide #!25.1 models
    40245 
    40246 > hide #!23.1 models
    40247 
    40248 > view A2503_view4_map
    40249 
    40250 > graphics quality 6
    40251 
    40252 > show #!1.2 models
    40253 
    40254 > show #!1.1 models
    40255 
    40256 > volume #1.1 level 0.015
    40257 
    40258 > hide #1.2
    40259 
    40260 > color #1.2/Y maroon
    40261 
    40262 > color #1.2/Z rebecca purple
    40263 
    40264 > color #1.2/a:2058-2064 cornflower blue
    40265 
    40266 > color #1.2/a:2447-2451 gold
    40267 
    40268 > color #1.2/a:2499-2506 green yellow
    40269 
    40270 > color #1.2/a:2499-2506 green yellow target c
    40271 
    40272 > color #1.2/a:2451 green target a
    40273 
    40274 > ~show #1.2
    40275 
    40276 > ~hbonds #1.2
    40277 
    40278 > name to_show
    40279 > #1.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    40280 
    40281 > show to_show
    40282 
    40283 > ~cartoon #1.2
    40284 
    40285 > cartoon #1.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    40286 
    40287 > transparency #1.2 60 target c
    40288 
    40289 > volume #1.1 color black transparency 0.8
    40290 
    40291 > volume zone #1.1 nearAtoms #1.2/a:2058-2064,2499-2506,2447,2450,2451 &
    40292 > sideonly range 2
    40293 
    40294 > bond #1.2/Y:76@N3':101@C
    40295 
    40296 Created 0 bonds 
    40297 
    40298 > bond #1.2/Z:76@N3':101@C
    40299 
    40300 Created 0 bonds 
    40301 
    40302 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    40303 
    40304 > style #1.2/Y:101 ball
    40305 
    40306 Changed 8 atom styles 
    40307 
    40308 > style #1.2/Z:101 ball
    40309 
    40310 Changed 8 atom styles 
    40311 
    40312 > size #1.2/Y:101:76@N3' ballScale 0.10 stickRadius 0.06
    40313 
    40314 Changed 8 bond radii, 1 ball scales 
    40315 
    40316 > size #1.2/Z:101:76@N3' ballScale 0.10 stickRadius 0.06
    40317 
    40318 Changed 8 bond radii, 1 ball scales 
    40319 
    40320 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_8emm.png height
    40321 > 600 width 600 supersample 3
    40322 
    40323 > hide #!1.2 models
    40324 
    40325 > hide #!1.1 models
    40326 
    40327 > show #!1.7 models
    40328 
    40329 > show #!1.6 models
    40330 
    40331 > volume #1.6 level 0.01
    40332 
    40333 > hide #1.7
    40334 
    40335 > color #1.7/Y maroon
    40336 
    40337 > color #1.7/Z rebecca purple
    40338 
    40339 > color #1.7/a:2058-2064 cornflower blue
    40340 
    40341 > color #1.7/a:2447-2451 gold
    40342 
    40343 > color #1.7/a:2499-2506 green yellow
    40344 
    40345 > color #1.7/a:2499-2506 green yellow target c
    40346 
    40347 > color #1.7/a:2451 green target a
    40348 
    40349 > ~show #1.7
    40350 
    40351 > ~hbonds #1.7
    40352 
    40353 > name to_show
    40354 > #1.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    40355 
    40356 > show to_show
    40357 
    40358 > ~cartoon #1.7
    40359 
    40360 > cartoon #1.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    40361 
    40362 > transparency #1.7 60 target c
    40363 
    40364 > volume #1.6 color black transparency 0.8
    40365 
    40366 > volume zone #1.6 nearAtoms #1.7/a:2058-2064,2499-2506,2447,2450,2451 &
    40367 > sideonly range 2
    40368 
    40369 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_8cgk.png height
    40370 > 600 width 600 supersample 3
    40371 
    40372 > hide #!1.7 models
    40373 
    40374 > hide #!1.6 models
    40375 
    40376 > show #!1.9 models
    40377 
    40378 > show #!1.8 models
    40379 
    40380 > volume #1.8 level 0.11
    40381 
    40382 > hide #1.9
    40383 
    40384 > color #1.9/Y maroon
    40385 
    40386 > color #1.9/Z rebecca purple
    40387 
    40388 > color #1.9/A:2058-2064 cornflower blue
    40389 
    40390 > color #1.9/A:2447-2451 gold
    40391 
    40392 > color #1.9/A:2499-2506 green yellow
    40393 
    40394 > color #1.9/A:2499-2506 green yellow target c
    40395 
    40396 > color #1.9/A:2451 green target a
    40397 
    40398 > ~show #1.9
    40399 
    40400 > ~hbonds #1.9
    40401 
    40402 > name to_show
    40403 > #1.9/A:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    40404 
    40405 > show to_show
    40406 
    40407 > ~cartoon #1.9
    40408 
    40409 > cartoon #1.9/A:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    40410 
    40411 > transparency #1.9 60 target c
    40412 
    40413 > volume #1.8 color black transparency 0.8
    40414 
    40415 > volume zone #1.8 nearAtoms #1.9/A:2058-2064,2499-2506,2447,2450,2451 &
    40416 > sideonly range 2
    40417 
    40418 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_7bv8.png height
    40419 > 600 width 600 supersample 3
    40420 
    40421 > hide #!1.9 models
    40422 
    40423 > hide #!1.8 models
    40424 
    40425 > show #!1.11 models
    40426 
    40427 > show #!1.10 models
    40428 
    40429 > volume #1.10 level 0.025
    40430 
    40431 > hide #1.11
    40432 
    40433 > color #1.11/Y maroon
    40434 
    40435 > color #1.11/B8 rebecca purple
    40436 
    40437 > color #1.11/BA:2058-2064 cornflower blue
    40438 
    40439 > color #1.11/BA:2447-2451 gold
    40440 
    40441 > color #1.11/BA:2499-2506 green yellow
    40442 
    40443 > color #1.11/BA:2499-2506 green yellow target c
    40444 
    40445 > color #1.11/BA:2451 green target a
    40446 
    40447 > ~show #1.11
    40448 
    40449 > ~hbonds #1.11
    40450 
    40451 > name to_show
    40452 > #1.11/BA:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/B8:73-76,101
    40453 
    40454 > show to_show
    40455 
    40456 > ~cartoon #1.11
    40457 
    40458 > cartoon #1.11/BA:2058-2064,2499-2506,2447-2451/Y:73-76/B8:73-76
    40459 
    40460 > transparency #1.11 60 target c
    40461 
    40462 > volume #1.10 color black transparency 0.8
    40463 
    40464 > volume zone #1.10 nearAtoms #1.11/BA:2058-2064,2499-2506,2447,2450,2451 &
    40465 > sideonly range 2
    40466 
    40467 > bond #1.11/B5:24@C/B8:76@O3'
    40468 
    40469 Created 0 bonds 
    40470 
    40471 > cartoon #1.11/B5
    40472 
    40473 > style #1.11/B5' ball
    40474 
    40475 Changed 0 atom styles 
    40476 
    40477 > size #1.11/B5/B8:76@O3' ballScale 0.10 stickRadius 0.06
    40478 
    40479 Changed 152 bond radii, 1 ball scales 
    40480 
    40481 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_7o1a.png height
    40482 > 600 width 600 supersample 3
    40483 
    40484 > hide #!1.11 models
    40485 
    40486 > hide #!1.10 models
    40487 
    40488 > show #!1.14 models
    40489 
    40490 > show #!1.13 models
    40491 
    40492 > volume #1.13 level 0.01
    40493 
    40494 > hide #1.14
    40495 
    40496 > color #1.14/Y maroon
    40497 
    40498 > color #1.14/Z rebecca purple
    40499 
    40500 > color #1.14/a:2058-2064 cornflower blue
    40501 
    40502 > color #1.14/a:2447-2451 gold
    40503 
    40504 > color #1.14/a:2499-2506 green yellow
    40505 
    40506 > color #1.14/a:2499-2506 green yellow target c
    40507 
    40508 > color #1.14/a:2451 green target a
    40509 
    40510 > ~show #1.14
    40511 
    40512 > ~hbonds #1.14
    40513 
    40514 > name to_show
    40515 > #1.14/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    40516 
    40517 > show to_show
    40518 
    40519 > ~cartoon #1.14
    40520 
    40521 > cartoon #1.14/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    40522 
    40523 > transparency #1.14 60 target c
    40524 
    40525 > volume #1.13 color black transparency 0.8
    40526 
    40527 > volume zone #1.13 nearAtoms #1.14/a:2058-2064,2499-2506,2447,2450,2451 &
    40528 > sideonly range 2
    40529 
    40530 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_8cam.png height
    40531 > 600 width 600 supersample 3
    40532 
    40533 > hide #!1.14 models
    40534 
    40535 > hide #!1.13 models
    40536 
    40537 > show #!6.10 models
    40538 
    40539 > show #!4.10 models
    40540 
    40541 > volume #4.10 level 0.55
    40542 
    40543 > hide #6.10
    40544 
    40545 > color #6.10/Y maroon
    40546 
    40547 > color #6.10/Z rebecca purple
    40548 
    40549 > color #6.10/a:2058-2064 cornflower blue
    40550 
    40551 > color #6.10/a:2447-2451 gold
    40552 
    40553 > color #6.10/a:2499-2506 green yellow
    40554 
    40555 > color #6.10/a:2499-2506 green yellow target c
    40556 
    40557 > color #6.10/a:2451 green target a
    40558 
    40559 > ~show #6.10
    40560 
    40561 > ~hbonds #6.10
    40562 
    40563 > name to_show
    40564 > #6.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    40565 
    40566 > show to_show
    40567 
    40568 > ~cartoon #6.10
    40569 
    40570 > cartoon #6.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    40571 
    40572 > transparency #6.10 60 target c
    40573 
    40574 > volume #4.10 color black transparency 0.8
    40575 
    40576 > volume zone #4.10 nearAtoms #6.10/a:2058-2064,2499-2506,2447,2450,2451 &
    40577 > sideonly range 2
    40578 
    40579 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J83_cl0.png
    40580 > height 600 width 600 supersample 3
    40581 
    40582 > hide #!6.10 models
    40583 
    40584 > hide #!4.10 models
    40585 
    40586 > show #!6.1 models
    40587 
    40588 > show #!4.1 models
    40589 
    40590 > volume #4.1 level 0.6
    40591 
    40592 > hide #6.1
    40593 
    40594 > color #6.1/Y maroon
    40595 
    40596 > color #6.1/Z rebecca purple
    40597 
    40598 > color #6.1/a:2058-2064 cornflower blue
    40599 
    40600 > color #6.1/a:2447-2451 gold
    40601 
    40602 > color #6.1/a:2499-2506 green yellow
    40603 
    40604 > color #6.1/a:2499-2506 green yellow target c
    40605 
    40606 > color #6.1/a:2451 green target a
    40607 
    40608 > ~show #6.1
    40609 
    40610 > ~hbonds #6.1
    40611 
    40612 > name to_show
    40613 > #6.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    40614 
    40615 > show to_show
    40616 
    40617 > ~cartoon #6.1
    40618 
    40619 > cartoon #6.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    40620 
    40621 > transparency #6.1 60 target c
    40622 
    40623 > volume #4.1 color black transparency 0.8
    40624 
    40625 > volume zone #4.1 nearAtoms #6.1/a:2058-2064,2499-2506,2447,2450,2451 &
    40626 > sideonly range 2
    40627 
    40628 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J84_cl1.png
    40629 > height 600 width 600 supersample 3
    40630 
    40631 > hide #!6.1 models
    40632 
    40633 > hide #!4.1 models
    40634 
    40635 > show #!6.2 models
    40636 
    40637 > show #!4.2 models
    40638 
    40639 > volume #4.2 level 0.7
    40640 
    40641 > hide #6.2
    40642 
    40643 > color #6.2/Y maroon
    40644 
    40645 > color #6.2/Z rebecca purple
    40646 
    40647 > color #6.2/a:2058-2064 cornflower blue
    40648 
    40649 > color #6.2/a:2447-2451 gold
    40650 
    40651 > color #6.2/a:2499-2506 green yellow
    40652 
    40653 > color #6.2/a:2499-2506 green yellow target c
    40654 
    40655 > color #6.2/a:2451 green target a
    40656 
    40657 > ~show #6.2
    40658 
    40659 > ~hbonds #6.2
    40660 
    40661 > name to_show
    40662 > #6.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    40663 
    40664 > show to_show
    40665 
    40666 > ~cartoon #6.2
    40667 
    40668 > cartoon #6.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    40669 
    40670 > transparency #6.2 60 target c
    40671 
    40672 > volume #4.2 color black transparency 0.8
    40673 
    40674 > volume zone #4.2 nearAtoms #6.2/a:2058-2064,2499-2506,2447,2450,2451 &
    40675 > sideonly range 2
    40676 
    40677 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J85_cl2.png
    40678 > height 600 width 600 supersample 3
    40679 
    40680 > hide #!6.2 models
    40681 
    40682 > hide #!4.2 models
    40683 
    40684 > show #!6.3 models
    40685 
    40686 > show #!4.3 models
    40687 
    40688 > volume #4.3 level 0.6
    40689 
    40690 > hide #6.3
    40691 
    40692 > color #6.3/Y maroon
    40693 
    40694 > color #6.3/Z rebecca purple
    40695 
    40696 > color #6.3/a:2058-2064 cornflower blue
    40697 
    40698 > color #6.3/a:2447-2451 gold
    40699 
    40700 > color #6.3/a:2499-2506 green yellow
    40701 
    40702 > color #6.3/a:2499-2506 green yellow target c
    40703 
    40704 > color #6.3/a:2451 green target a
    40705 
    40706 > ~show #6.3
    40707 
    40708 > ~hbonds #6.3
    40709 
    40710 > name to_show
    40711 > #6.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    40712 
    40713 > show to_show
    40714 
    40715 > ~cartoon #6.3
    40716 
    40717 > cartoon #6.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    40718 
    40719 > transparency #6.3 60 target c
    40720 
    40721 > volume #4.3 color black transparency 0.8
    40722 
    40723 > volume zone #4.3 nearAtoms #6.3/a:2058-2064,2499-2506,2447,2450,2451 &
    40724 > sideonly range 2
    40725 
    40726 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J86_cl3.png
    40727 > height 600 width 600 supersample 3
    40728 
    40729 > hide #!6.3 models
    40730 
    40731 > hide #!4.3 models
    40732 
    40733 > show #!6.4 models
    40734 
    40735 > show #!4.4 models
    40736 
    40737 > volume #4.4 level 0.65
    40738 
    40739 > hide #6.4
    40740 
    40741 > color #6.4/Y maroon
    40742 
    40743 > color #6.4/Z rebecca purple
    40744 
    40745 > color #6.4/a:2058-2064 cornflower blue
    40746 
    40747 > color #6.4/a:2447-2451 gold
    40748 
    40749 > color #6.4/a:2499-2506 green yellow
    40750 
    40751 > color #6.4/a:2499-2506 green yellow target c
    40752 
    40753 > color #6.4/a:2451 green target a
    40754 
    40755 > ~show #6.4
    40756 
    40757 > ~hbonds #6.4
    40758 
    40759 > name to_show
    40760 > #6.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    40761 
    40762 > show to_show
    40763 
    40764 > ~cartoon #6.4
    40765 
    40766 > cartoon #6.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    40767 
    40768 > transparency #6.4 60 target c
    40769 
    40770 > volume #4.4 color black transparency 0.8
    40771 
    40772 > volume zone #4.4 nearAtoms #6.4/a:2058-2064,2499-2506,2447,2450,2451 &
    40773 > sideonly range 2
    40774 
    40775 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J87_cl4.png
    40776 > height 600 width 600 supersample 3
    40777 
    40778 > hide #!6.4 models
    40779 
    40780 > hide #!4.4 models
    40781 
    40782 > show #!6.5 models
    40783 
    40784 > show #!4.5 models
    40785 
    40786 > volume #4.5 level 0.65
    40787 
    40788 > hide #6.5
    40789 
    40790 > color #6.5/Y maroon
    40791 
    40792 > color #6.5/Z rebecca purple
    40793 
    40794 > color #6.5/a:2058-2064 cornflower blue
    40795 
    40796 > color #6.5/a:2447-2451 gold
    40797 
    40798 > color #6.5/a:2499-2506 green yellow
    40799 
    40800 > color #6.5/a:2499-2506 green yellow target c
    40801 
    40802 > color #6.5/a:2451 green target a
    40803 
    40804 > ~show #6.5
    40805 
    40806 > ~hbonds #6.5
    40807 
    40808 > name to_show
    40809 > #6.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    40810 
    40811 > show to_show
    40812 
    40813 > ~cartoon #6.5
    40814 
    40815 > cartoon #6.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    40816 
    40817 > transparency #6.5 60 target c
    40818 
    40819 > volume #4.5 color black transparency 0.8
    40820 
    40821 > volume zone #4.5 nearAtoms #6.5/a:2058-2064,2499-2506,2447,2450,2451 &
    40822 > sideonly range 2
    40823 
    40824 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J88_cl5.png
    40825 > height 600 width 600 supersample 3
    40826 
    40827 > hide #!6.5 models
    40828 
    40829 > hide #!4.5 models
    40830 
    40831 > show #!6.6 models
    40832 
    40833 > show #!4.6 models
    40834 
    40835 > volume #4.6 level 0.6
    40836 
    40837 > hide #6.6
    40838 
    40839 > color #6.6/Y maroon
    40840 
    40841 > color #6.6/Z rebecca purple
    40842 
    40843 > color #6.6/a:2058-2064 cornflower blue
    40844 
    40845 > color #6.6/a:2447-2451 gold
    40846 
    40847 > color #6.6/a:2499-2506 green yellow
    40848 
    40849 > color #6.6/a:2499-2506 green yellow target c
    40850 
    40851 > color #6.6/a:2451 green target a
    40852 
    40853 > ~show #6.6
    40854 
    40855 > ~hbonds #6.6
    40856 
    40857 > name to_show
    40858 > #6.6/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    40859 
    40860 > show to_show
    40861 
    40862 > ~cartoon #6.6
    40863 
    40864 > cartoon #6.6/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    40865 
    40866 > transparency #6.6 60 target c
    40867 
    40868 > volume #4.6 color black transparency 0.8
    40869 
    40870 > volume zone #4.6 nearAtoms #6.6/a:2058-2064,2499-2506,2447,2450,2451 &
    40871 > sideonly range 2
    40872 
    40873 > ~show #6.6/a:2059-2060
    40874 
    40875 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J89_cl6.png
    40876 > height 600 width 600 supersample 3
    40877 
    40878 > hide #!6.6 models
    40879 
    40880 > hide #!4.6 models
    40881 
    40882 > show #!6.7 models
    40883 
    40884 > show #!4.7 models
    40885 
    40886 > volume #4.7 level 0.65
    40887 
    40888 > hide #6.7
    40889 
    40890 > color #6.7/Y maroon
    40891 
    40892 > color #6.7/Z rebecca purple
    40893 
    40894 > color #6.7/a:2058-2064 cornflower blue
    40895 
    40896 > color #6.7/a:2447-2451 gold
    40897 
    40898 > color #6.7/a:2499-2506 green yellow
    40899 
    40900 > color #6.7/a:2499-2506 green yellow target c
    40901 
    40902 > color #6.7/a:2451 green target a
    40903 
    40904 > ~show #6.7
    40905 
    40906 > ~hbonds #6.7
    40907 
    40908 > name to_show
    40909 > #6.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    40910 
    40911 > show to_show
    40912 
    40913 > ~cartoon #6.7
    40914 
    40915 > cartoon #6.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    40916 
    40917 > transparency #6.7 60 target c
    40918 
    40919 > volume #4.7 color black transparency 0.8
    40920 
    40921 > volume zone #4.7 nearAtoms #6.7/a:2058-2064,2499-2506,2447,2450,2451 &
    40922 > sideonly range 2
    40923 
    40924 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J90_cl7.png
    40925 > height 600 width 600 supersample 3
    40926 
    40927 > hide #!6.7 models
    40928 
    40929 > hide #!4.7 models
    40930 
    40931 > show #!6.8 models
    40932 
    40933 > show #!4.8 models
    40934 
    40935 > volume #4.8 level 0.55
    40936 
    40937 > hide #6.8
    40938 
    40939 > color #6.8/Y maroon
    40940 
    40941 > color #6.8/Z rebecca purple
    40942 
    40943 > color #6.8/a:2058-2064 cornflower blue
    40944 
    40945 > color #6.8/a:2447-2451 gold
    40946 
    40947 > color #6.8/a:2499-2506 green yellow
    40948 
    40949 > color #6.8/a:2499-2506 green yellow target c
    40950 
    40951 > color #6.8/a:2451 green target a
    40952 
    40953 > ~show #6.8
    40954 
    40955 > ~hbonds #6.8
    40956 
    40957 > name to_show
    40958 > #6.8/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    40959 
    40960 > show to_show
    40961 
    40962 > ~cartoon #6.8
    40963 
    40964 > cartoon #6.8/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    40965 
    40966 > transparency #6.8 60 target c
    40967 
    40968 > volume #4.8 color black transparency 0.8
    40969 
    40970 > volume zone #4.8 nearAtoms #6.8/a:2058-2064,2499-2506,2447,2450,2451 &
    40971 > sideonly range 2
    40972 
    40973 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J91_cl8.png
    40974 > height 600 width 600 supersample 3
    40975 
    40976 > hide #!6.8 models
    40977 
    40978 > hide #!4.8 models
    40979 
    40980 > show #!6.9 models
    40981 
    40982 > show #!4.9 models
    40983 
    40984 > volume #4.9 level 0.55
    40985 
    40986 > hide #6.9
    40987 
    40988 > color #6.9/Y maroon
    40989 
    40990 > color #6.9/Z rebecca purple
    40991 
    40992 > color #6.9/a:2058-2064 cornflower blue
    40993 
    40994 > color #6.9/a:2447-2451 gold
    40995 
    40996 > color #6.9/a:2499-2506 green yellow
    40997 
    40998 > color #6.9/a:2499-2506 green yellow target c
    40999 
    41000 > color #6.9/a:2451 green target a
    41001 
    41002 > ~show #6.9
    41003 
    41004 > ~hbonds #6.9
    41005 
    41006 > name to_show
    41007 > #6.9/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41008 
    41009 > show to_show
    41010 
    41011 > ~cartoon #6.9
    41012 
    41013 > cartoon #6.9/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41014 
    41015 > transparency #6.9 60 target c
    41016 
    41017 > volume #4.9 color black transparency 0.8
    41018 
    41019 > volume zone #4.9 nearAtoms #6.9/a:2058-2064,2499-2506,2447,2450,2451 &
    41020 > sideonly range 2
    41021 
    41022 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J92_cl9.png
    41023 > height 600 width 600 supersample 3
    41024 
    41025 > hide #!6.9 models
    41026 
    41027 > hide #!4.9 models
    41028 
    41029 > show #!14.10 models
    41030 
    41031 > show #!12.10 models
    41032 
    41033 > volume #12.10 level 0.5
    41034 
    41035 > hide #14.10
    41036 
    41037 > color #14.10/Y maroon
    41038 
    41039 > color #14.10/Z rebecca purple
    41040 
    41041 > color #14.10/a:2058-2064 cornflower blue
    41042 
    41043 > color #14.10/a:2447-2451 gold
    41044 
    41045 > color #14.10/a:2499-2506 green yellow
    41046 
    41047 > color #14.10/a:2499-2506 green yellow target c
    41048 
    41049 > color #14.10/a:2451 green target a
    41050 
    41051 > ~show #14.10
    41052 
    41053 > ~hbonds #14.10
    41054 
    41055 > name to_show
    41056 > #14.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41057 
    41058 > show to_show
    41059 
    41060 > ~cartoon #14.10
    41061 
    41062 > cartoon #14.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41063 
    41064 > transparency #14.10 60 target c
    41065 
    41066 > volume #12.10 color black transparency 0.8
    41067 
    41068 > volume zone #12.10 nearAtoms #14.10/a:2058-2064,2499-2506,2447,2450,2451 &
    41069 > sideonly range 2
    41070 
    41071 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J53_c0.png
    41072 > height 600 width 600 supersample 3
    41073 
    41074 > hide #!14.10 models
    41075 
    41076 > hide #!12.10 models
    41077 
    41078 > show #!14.1 models
    41079 
    41080 > show #!12.1 models
    41081 
    41082 > volume #12.1 level 0.5
    41083 
    41084 > hide #14.1
    41085 
    41086 > color #14.1/Y maroon
    41087 
    41088 > color #14.1/Z rebecca purple
    41089 
    41090 > color #14.1/a:2058-2064 cornflower blue
    41091 
    41092 > color #14.1/a:2447-2451 gold
    41093 
    41094 > color #14.1/a:2499-2506 green yellow
    41095 
    41096 > color #14.1/a:2499-2506 green yellow target c
    41097 
    41098 > color #14.1/a:2451 green target a
    41099 
    41100 > ~show #14.1
    41101 
    41102 > ~hbonds #14.1
    41103 
    41104 > name to_show
    41105 > #14.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41106 
    41107 > show to_show
    41108 
    41109 > ~cartoon #14.1
    41110 
    41111 > cartoon #14.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41112 
    41113 > transparency #14.1 60 target c
    41114 
    41115 > volume #12.1 color black transparency 0.8
    41116 
    41117 > volume zone #12.1 nearAtoms #14.1/a:2058-2064,2499-2506,2447,2450,2451 &
    41118 > sideonly range 2
    41119 
    41120 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J54_c1.png
    41121 > height 600 width 600 supersample 3
    41122 
    41123 > hide #!14.1 models
    41124 
    41125 > hide #!12.1 models
    41126 
    41127 > show #!14.2 models
    41128 
    41129 > show #!12.2 models
    41130 
    41131 > volume #12.2 level 0.5
    41132 
    41133 > hide #14.2
    41134 
    41135 > color #14.2/Y maroon
    41136 
    41137 > color #14.2/Z rebecca purple
    41138 
    41139 > color #14.2/a:2058-2064 cornflower blue
    41140 
    41141 > color #14.2/a:2447-2451 gold
    41142 
    41143 > color #14.2/a:2499-2506 green yellow
    41144 
    41145 > color #14.2/a:2499-2506 green yellow target c
    41146 
    41147 > color #14.2/a:2451 green target a
    41148 
    41149 > ~show #14.2
    41150 
    41151 > ~hbonds #14.2
    41152 
    41153 > name to_show
    41154 > #14.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41155 
    41156 > show to_show
    41157 
    41158 > ~cartoon #14.2
    41159 
    41160 > cartoon #14.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41161 
    41162 > transparency #14.2 60 target c
    41163 
    41164 > volume #12.2 color black transparency 0.8
    41165 
    41166 > volume zone #12.2 nearAtoms #14.2/a:2058-2064,2499-2506,2447,2450,2451 &
    41167 > sideonly range 2
    41168 
    41169 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J55_c2.png
    41170 > height 600 width 600 supersample 3
    41171 
    41172 > hide #!14.2 models
    41173 
    41174 > hide #!12.2 models
    41175 
    41176 > show #!14.3 models
    41177 
    41178 > show #!12.3 models
    41179 
    41180 > volume #12.3 level 0.5
    41181 
    41182 > hide #14.3
    41183 
    41184 > color #14.3/Y maroon
    41185 
    41186 > color #14.3/Z rebecca purple
    41187 
    41188 > color #14.3/a:2058-2064 cornflower blue
    41189 
    41190 > color #14.3/a:2447-2451 gold
    41191 
    41192 > color #14.3/a:2499-2506 green yellow
    41193 
    41194 > color #14.3/a:2499-2506 green yellow target c
    41195 
    41196 > color #14.3/a:2451 green target a
    41197 
    41198 > ~show #14.3
    41199 
    41200 > ~hbonds #14.3
    41201 
    41202 > name to_show
    41203 > #14.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41204 
    41205 > show to_show
    41206 
    41207 > ~cartoon #14.3
    41208 
    41209 > cartoon #14.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41210 
    41211 > transparency #14.3 60 target c
    41212 
    41213 > volume #12.3 color black transparency 0.8
    41214 
    41215 > volume zone #12.3 nearAtoms #14.3/a:2058-2064,2499-2506,2447,2450,2451 &
    41216 > sideonly range 2
    41217 
    41218 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J56_c3.png
    41219 > height 600 width 600 supersample 3
    41220 
    41221 > hide #!14.3 models
    41222 
    41223 > hide #!12.3 models
    41224 
    41225 > show #!14.4 models
    41226 
    41227 > show #!12.4 models
    41228 
    41229 > volume #12.4 level 0.5
    41230 
    41231 > hide #14.4
    41232 
    41233 > color #14.4/Y maroon
    41234 
    41235 > color #14.4/Z rebecca purple
    41236 
    41237 > color #14.4/a:2058-2064 cornflower blue
    41238 
    41239 > color #14.4/a:2447-2451 gold
    41240 
    41241 > color #14.4/a:2499-2506 green yellow
    41242 
    41243 > color #14.4/a:2499-2506 green yellow target c
    41244 
    41245 > color #14.4/a:2451 green target a
    41246 
    41247 > ~show #14.4
    41248 
    41249 > ~hbonds #14.4
    41250 
    41251 > name to_show
    41252 > #14.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41253 
    41254 > show to_show
    41255 
    41256 > ~cartoon #14.4
    41257 
    41258 > cartoon #14.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41259 
    41260 > transparency #14.4 60 target c
    41261 
    41262 > volume #12.4 color black transparency 0.8
    41263 
    41264 > volume zone #12.4 nearAtoms #14.4/a:2058-2064,2499-2506,2447,2450,2451 &
    41265 > sideonly range 2
    41266 
    41267 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J57_c4.png
    41268 > height 600 width 600 supersample 3
    41269 
    41270 > hide #!14.4 models
    41271 
    41272 > hide #!12.4 models
    41273 
    41274 > show #!14.5 models
    41275 
    41276 > show #!12.5 models
    41277 
    41278 > volume #12.5 level 0.5
    41279 
    41280 > hide #14.5
    41281 
    41282 > color #14.5/Y maroon
    41283 
    41284 > color #14.5/Z rebecca purple
    41285 
    41286 > color #14.5/a:2058-2064 cornflower blue
    41287 
    41288 > color #14.5/a:2447-2451 gold
    41289 
    41290 > color #14.5/a:2499-2506 green yellow
    41291 
    41292 > color #14.5/a:2499-2506 green yellow target c
    41293 
    41294 > color #14.5/a:2451 green target a
    41295 
    41296 > ~show #14.5
    41297 
    41298 > ~hbonds #14.5
    41299 
    41300 > name to_show
    41301 > #14.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41302 
    41303 > show to_show
    41304 
    41305 > ~cartoon #14.5
    41306 
    41307 > cartoon #14.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41308 
    41309 > transparency #14.5 60 target c
    41310 
    41311 > volume #12.5 color black transparency 0.8
    41312 
    41313 > volume zone #12.5 nearAtoms #14.5/a:2058-2064,2499-2506,2447,2450,2451 &
    41314 > sideonly range 2
    41315 
    41316 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J58_c5.png
    41317 > height 600 width 600 supersample 3
    41318 
    41319 > hide #!14.5 models
    41320 
    41321 > hide #!12.5 models
    41322 
    41323 > show #!14.6 models
    41324 
    41325 > show #!12.6 models
    41326 
    41327 > volume #12.6 level 0.5
    41328 
    41329 > hide #14.6
    41330 
    41331 > color #14.6/Y maroon
    41332 
    41333 > color #14.6/Z rebecca purple
    41334 
    41335 > color #14.6/a:2058-2064 cornflower blue
    41336 
    41337 > color #14.6/a:2447-2451 gold
    41338 
    41339 > color #14.6/a:2499-2506 green yellow
    41340 
    41341 > color #14.6/a:2499-2506 green yellow target c
    41342 
    41343 > color #14.6/a:2451 green target a
    41344 
    41345 > ~show #14.6
    41346 
    41347 > ~hbonds #14.6
    41348 
    41349 > name to_show
    41350 > #14.6/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41351 
    41352 > show to_show
    41353 
    41354 > ~cartoon #14.6
    41355 
    41356 > cartoon #14.6/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41357 
    41358 > transparency #14.6 60 target c
    41359 
    41360 > volume #12.6 color black transparency 0.8
    41361 
    41362 > volume zone #12.6 nearAtoms #14.6/a:2058-2064,2499-2506,2447,2450,2451 &
    41363 > sideonly range 2
    41364 
    41365 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J59_c6.png
    41366 > height 600 width 600 supersample 3
    41367 
    41368 > hide #!14.6 models
    41369 
    41370 > hide #!12.6 models
    41371 
    41372 > show #!14.7 models
    41373 
    41374 > show #!12.7 models
    41375 
    41376 > volume #12.7 level 0.5
    41377 
    41378 > hide #14.7
    41379 
    41380 > color #14.7/Y maroon
    41381 
    41382 > color #14.7/Z rebecca purple
    41383 
    41384 > color #14.7/a:2058-2064 cornflower blue
    41385 
    41386 > color #14.7/a:2447-2451 gold
    41387 
    41388 > color #14.7/a:2499-2506 green yellow
    41389 
    41390 > color #14.7/a:2499-2506 green yellow target c
    41391 
    41392 > color #14.7/a:2451 green target a
    41393 
    41394 > ~show #14.7
    41395 
    41396 > ~hbonds #14.7
    41397 
    41398 > name to_show
    41399 > #14.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41400 
    41401 > show to_show
    41402 
    41403 > ~cartoon #14.7
    41404 
    41405 > cartoon #14.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41406 
    41407 > transparency #14.7 60 target c
    41408 
    41409 > volume #12.7 color black transparency 0.8
    41410 
    41411 > volume zone #12.7 nearAtoms #14.7/a:2058-2064,2499-2506,2447,2450,2451 &
    41412 > sideonly range 2
    41413 
    41414 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J60_c7.png
    41415 > height 600 width 600 supersample 3
    41416 
    41417 > hide #!14.7 models
    41418 
    41419 > hide #!12.7 models
    41420 
    41421 > show #!14.8 models
    41422 
    41423 > show #!12.8 models
    41424 
    41425 > volume #12.8 level 0.5
    41426 
    41427 > hide #14.8
    41428 
    41429 > color #14.8/Y maroon
    41430 
    41431 > color #14.8/Z rebecca purple
    41432 
    41433 > color #14.8/a:2058-2064 cornflower blue
    41434 
    41435 > color #14.8/a:2447-2451 gold
    41436 
    41437 > color #14.8/a:2499-2506 green yellow
    41438 
    41439 > color #14.8/a:2499-2506 green yellow target c
    41440 
    41441 > color #14.8/a:2451 green target a
    41442 
    41443 > ~show #14.8
    41444 
    41445 > ~hbonds #14.8
    41446 
    41447 > name to_show
    41448 > #14.8/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41449 
    41450 > show to_show
    41451 
    41452 > ~cartoon #14.8
    41453 
    41454 > cartoon #14.8/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41455 
    41456 > transparency #14.8 60 target c
    41457 
    41458 > volume #12.8 color black transparency 0.8
    41459 
    41460 > volume zone #12.8 nearAtoms #14.8/a:2058-2064,2499-2506,2447,2450,2451 &
    41461 > sideonly range 2
    41462 
    41463 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J61_c8.png
    41464 > height 600 width 600 supersample 3
    41465 
    41466 > hide #!14.8 models
    41467 
    41468 > hide #!12.8 models
    41469 
    41470 > show #!14.9 models
    41471 
    41472 > show #!12.9 models
    41473 
    41474 > volume #12.9 level 0.5
    41475 
    41476 > hide #14.9
    41477 
    41478 > color #14.9/Y maroon
    41479 
    41480 > color #14.9/Z rebecca purple
    41481 
    41482 > color #14.9/a:2058-2064 cornflower blue
    41483 
    41484 > color #14.9/a:2447-2451 gold
    41485 
    41486 > color #14.9/a:2499-2506 green yellow
    41487 
    41488 > color #14.9/a:2499-2506 green yellow target c
    41489 
    41490 > color #14.9/a:2451 green target a
    41491 
    41492 > ~show #14.9
    41493 
    41494 > ~hbonds #14.9
    41495 
    41496 > name to_show
    41497 > #14.9/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41498 
    41499 > show to_show
    41500 
    41501 > ~cartoon #14.9
    41502 
    41503 > cartoon #14.9/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41504 
    41505 > transparency #14.9 60 target c
    41506 
    41507 > volume #12.9 color black transparency 0.8
    41508 
    41509 > volume zone #12.9 nearAtoms #14.9/a:2058-2064,2499-2506,2447,2450,2451 &
    41510 > sideonly range 2
    41511 
    41512 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J62_c9.png
    41513 > height 600 width 600 supersample 3
    41514 
    41515 > hide #!14.9 models
    41516 
    41517 > hide #!12.9 models
    41518 
    41519 > show #!22.1 models
    41520 
    41521 > show #!21.1 models
    41522 
    41523 > volume #21.1 level 0.4
    41524 
    41525 > hide #22.1
    41526 
    41527 > color #22.1/Y maroon
    41528 
    41529 > color #22.1/Z rebecca purple
    41530 
    41531 > color #22.1/a:2058-2064 cornflower blue
    41532 
    41533 > color #22.1/a:2447-2451 gold
    41534 
    41535 > color #22.1/a:2499-2506 green yellow
    41536 
    41537 > color #22.1/a:2499-2506 green yellow target c
    41538 
    41539 > color #22.1/a:2451 green target a
    41540 
    41541 > ~show #22.1
    41542 
    41543 > ~hbonds #22.1
    41544 
    41545 > name to_show
    41546 > #22.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41547 
    41548 > show to_show
    41549 
    41550 > ~cartoon #22.1
    41551 
    41552 > cartoon #22.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41553 
    41554 > transparency #22.1 60 target c
    41555 
    41556 > volume #21.1 color black transparency 0.8
    41557 
    41558 > volume zone #21.1 nearAtoms #22.1/a:2058-2064,2499-2506,2447,2450,2451 &
    41559 > sideonly range 2
    41560 
    41561 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J111_ape.png
    41562 > height 600 width 600 supersample 3
    41563 
    41564 > hide #!22.1 models
    41565 
    41566 > hide #!21.1 models
    41567 
    41568 > show #!22.2 models
    41569 
    41570 > show #!21.2 models
    41571 
    41572 > volume #21.2 level 0.4
    41573 
    41574 > hide #22.2
    41575 
    41576 > color #22.2/Y maroon
    41577 
    41578 > color #22.2/Z rebecca purple
    41579 
    41580 > color #22.2/a:2058-2064 cornflower blue
    41581 
    41582 > color #22.2/a:2447-2451 gold
    41583 
    41584 > color #22.2/a:2499-2506 green yellow
    41585 
    41586 > color #22.2/a:2499-2506 green yellow target c
    41587 
    41588 > color #22.2/a:2451 green target a
    41589 
    41590 > ~show #22.2
    41591 
    41592 > ~hbonds #22.2
    41593 
    41594 > name to_show
    41595 > #22.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41596 
    41597 > show to_show
    41598 
    41599 > ~cartoon #22.2
    41600 
    41601 > cartoon #22.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41602 
    41603 > transparency #22.2 60 target c
    41604 
    41605 > volume #21.2 color black transparency 0.8
    41606 
    41607 > volume zone #21.2 nearAtoms #22.2/a:2058-2064,2499-2506,2447,2450,2451 &
    41608 > sideonly range 2
    41609 
    41610 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J112_ap.png
    41611 > height 600 width 600 supersample 3
    41612 
    41613 > hide #!22.2 models
    41614 
    41615 > hide #!21.2 models
    41616 
    41617 > show #!22.3 models
    41618 
    41619 > show #!21.3 models
    41620 
    41621 > volume #21.3 level 0.4
    41622 
    41623 > hide #22.3
    41624 
    41625 > color #22.3/Y maroon
    41626 
    41627 > color #22.3/Z rebecca purple
    41628 
    41629 > color #22.3/a:2058-2064 cornflower blue
    41630 
    41631 > color #22.3/a:2447-2451 gold
    41632 
    41633 > color #22.3/a:2499-2506 green yellow
    41634 
    41635 > color #22.3/a:2499-2506 green yellow target c
    41636 
    41637 > color #22.3/a:2451 green target a
    41638 
    41639 > ~show #22.3
    41640 
    41641 > ~hbonds #22.3
    41642 
    41643 > name to_show
    41644 > #22.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41645 
    41646 > show to_show
    41647 
    41648 > ~cartoon #22.3
    41649 
    41650 > cartoon #22.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41651 
    41652 > transparency #22.3 60 target c
    41653 
    41654 > volume #21.3 color black transparency 0.8
    41655 
    41656 > volume zone #21.3 nearAtoms #22.3/a:2058-2064,2499-2506,2447,2450,2451 &
    41657 > sideonly range 2
    41658 
    41659 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J113_pe.png
    41660 > height 600 width 600 supersample 3
    41661 
    41662 > hide #!22.3 models
    41663 
    41664 > hide #!21.3 models
    41665 
    41666 > show #!22.4 models
    41667 
    41668 > show #!21.4 models
    41669 
    41670 > volume #21.4 level 0.4
    41671 
    41672 > hide #22.4
    41673 
    41674 > color #22.4/Y maroon
    41675 
    41676 > color #22.4/Z rebecca purple
    41677 
    41678 > color #22.4/a:2058-2064 cornflower blue
    41679 
    41680 > color #22.4/a:2447-2451 gold
    41681 
    41682 > color #22.4/a:2499-2506 green yellow
    41683 
    41684 > color #22.4/a:2499-2506 green yellow target c
    41685 
    41686 > color #22.4/a:2451 green target a
    41687 
    41688 > ~show #22.4
    41689 
    41690 > ~hbonds #22.4
    41691 
    41692 > name to_show
    41693 > #22.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41694 
    41695 > show to_show
    41696 
    41697 > ~cartoon #22.4
    41698 
    41699 > cartoon #22.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41700 
    41701 > transparency #22.4 60 target c
    41702 
    41703 > volume #21.4 color black transparency 0.8
    41704 
    41705 > volume zone #21.4 nearAtoms #22.4/a:2058-2064,2499-2506,2447,2450,2451 &
    41706 > sideonly range 2
    41707 
    41708 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J124_e.png
    41709 > height 600 width 600 supersample 3
    41710 
    41711 > hide #!22.4 models
    41712 
    41713 > hide #!21.4 models
    41714 
    41715 > show #!25.10 models
    41716 
    41717 > show #!23.10 models
    41718 
    41719 > volume #23.10 level 0.1
    41720 
    41721 > hide #25.10
    41722 
    41723 > color #25.10/Y maroon
    41724 
    41725 > color #25.10/Z rebecca purple
    41726 
    41727 > color #25.10/a:2058-2064 cornflower blue
    41728 
    41729 > color #25.10/a:2447-2451 gold
    41730 
    41731 > color #25.10/a:2499-2506 green yellow
    41732 
    41733 > color #25.10/a:2499-2506 green yellow target c
    41734 
    41735 > color #25.10/a:2451 green target a
    41736 
    41737 > ~show #25.10
    41738 
    41739 > ~hbonds #25.10
    41740 
    41741 > name to_show
    41742 > #25.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41743 
    41744 > show to_show
    41745 
    41746 > ~cartoon #25.10
    41747 
    41748 > cartoon #25.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41749 
    41750 > transparency #25.10 60 target c
    41751 
    41752 > volume #23.10 color black transparency 0.8
    41753 
    41754 > volume zone #23.10 nearAtoms #25.10/a:2058-2064,2499-2506,2447,2450,2451 &
    41755 > sideonly range 2
    41756 
    41757 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J239_c0.png
    41758 > height 600 width 600 supersample 3
    41759 
    41760 > hide #!25.10 models
    41761 
    41762 > hide #!23.10 models
    41763 
    41764 > show #!25.1 models
    41765 
    41766 > show #!23.1 models
    41767 
    41768 > volume #23.1 level 0.1
    41769 
    41770 > hide #25.1
    41771 
    41772 > color #25.1/Y maroon
    41773 
    41774 > color #25.1/Z rebecca purple
    41775 
    41776 > color #25.1/a:2058-2064 cornflower blue
    41777 
    41778 > color #25.1/a:2447-2451 gold
    41779 
    41780 > color #25.1/a:2499-2506 green yellow
    41781 
    41782 > color #25.1/a:2499-2506 green yellow target c
    41783 
    41784 > color #25.1/a:2451 green target a
    41785 
    41786 > ~show #25.1
    41787 
    41788 > ~hbonds #25.1
    41789 
    41790 > name to_show
    41791 > #25.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41792 
    41793 > show to_show
    41794 
    41795 > ~cartoon #25.1
    41796 
    41797 > cartoon #25.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41798 
    41799 > transparency #25.1 60 target c
    41800 
    41801 > volume #23.1 color black transparency 0.8
    41802 
    41803 > volume zone #23.1 nearAtoms #25.1/a:2058-2064,2499-2506,2447,2450,2451 &
    41804 > sideonly range 2
    41805 
    41806 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J240_c1.png
    41807 > height 600 width 600 supersample 3
    41808 
    41809 > hide #!25.1 models
    41810 
    41811 > hide #!23.1 models
    41812 
    41813 > show #!25.2 models
    41814 
    41815 > show #!23.2 models
    41816 
    41817 > volume #23.2 level 0.1
    41818 
    41819 > hide #25.2
    41820 
    41821 > color #25.2/Y maroon
    41822 
    41823 > color #25.2/Z rebecca purple
    41824 
    41825 > color #25.2/a:2058-2064 cornflower blue
    41826 
    41827 > color #25.2/a:2447-2451 gold
    41828 
    41829 > color #25.2/a:2499-2506 green yellow
    41830 
    41831 > color #25.2/a:2499-2506 green yellow target c
    41832 
    41833 > color #25.2/a:2451 green target a
    41834 
    41835 > ~show #25.2
    41836 
    41837 > ~hbonds #25.2
    41838 
    41839 > name to_show
    41840 > #25.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41841 
    41842 > show to_show
    41843 
    41844 > ~cartoon #25.2
    41845 
    41846 > cartoon #25.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41847 
    41848 > transparency #25.2 60 target c
    41849 
    41850 > volume #23.2 color black transparency 0.8
    41851 
    41852 > volume zone #23.2 nearAtoms #25.2/a:2058-2064,2499-2506,2447,2450,2451 &
    41853 > sideonly range 2
    41854 
    41855 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J241_c2.png
    41856 > height 600 width 600 supersample 3
    41857 
    41858 > hide #!25.2 models
    41859 
    41860 > hide #!23.2 models
    41861 
    41862 > show #!25.3 models
    41863 
    41864 > show #!23.3 models
    41865 
    41866 > volume #23.3 level 0.1
    41867 
    41868 > hide #25.3
    41869 
    41870 > color #25.3/Y maroon
    41871 
    41872 > color #25.3/Z rebecca purple
    41873 
    41874 > color #25.3/a:2058-2064 cornflower blue
    41875 
    41876 > color #25.3/a:2447-2451 gold
    41877 
    41878 > color #25.3/a:2499-2506 green yellow
    41879 
    41880 > color #25.3/a:2499-2506 green yellow target c
    41881 
    41882 > color #25.3/a:2451 green target a
    41883 
    41884 > ~show #25.3
    41885 
    41886 > ~hbonds #25.3
    41887 
    41888 > name to_show
    41889 > #25.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41890 
    41891 > show to_show
    41892 
    41893 > ~cartoon #25.3
    41894 
    41895 > cartoon #25.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41896 
    41897 > transparency #25.3 60 target
    41898 
    41899 Missing "target" keyword's argument 
    41900 
    41901 > hide #!23.3 models
    41902 
    41903 > show #!23.3 models
    41904 
    41905 > hide #!23.3 models
    41906 
    41907 > show #!23.3 models
    41908 
    41909 > hide #!25.3 models
    41910 
    41911 > show #!25.3 models
    41912 
    41913 > hide #!23.3 models
    41914 
    41915 > show #!23.3 models
    41916 
    41917 > hide #!23.3 models
    41918 
    41919 > hide #!25.3 models
    41920 
    41921 > show #!25.2 models
    41922 
    41923 > show #!23.2 models
    41924 
    41925 > volume #23.2 level 0.1
    41926 
    41927 > hide #25.2
    41928 
    41929 > color #25.2/Y maroon
    41930 
    41931 > color #25.2/Z rebecca purple
    41932 
    41933 > color #25.2/a:2058-2064 cornflower blue
    41934 
    41935 > color #25.2/a:2447-2451 gold
    41936 
    41937 > color #25.2/a:2499-2506 green yellow
    41938 
    41939 > color #25.2/a:2499-2506 green yellow target c
    41940 
    41941 > color #25.2/a:2451 green target a
    41942 
    41943 > ~show #25.2
    41944 
    41945 > ~hbonds #25.2
    41946 
    41947 > name to_show
    41948 > #25.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41949 
    41950 > show to_show
    41951 
    41952 > ~cartoon #25.2
    41953 
    41954 > cartoon #25.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    41955 
    41956 > transparency #25.2 60 target c
    41957 
    41958 > volume #23.2 color black transparency 0.8
    41959 
    41960 > volume zone #23.2 nearAtoms #25.2/a:2058-2064,2499-2506,2447,2450,2451 &
    41961 > sideonly range 2
    41962 
    41963 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J241_c2.png
    41964 > height 600 width 600 supersample 3
    41965 
    41966 > hide #!25.2 models
    41967 
    41968 > hide #!23.2 models
    41969 
    41970 > show #!25.3 models
    41971 
    41972 > show #!23.3 models
    41973 
    41974 > volume #23.3 level 0.1
    41975 
    41976 > hide #25.3
    41977 
    41978 > color #25.3/Y maroon
    41979 
    41980 > color #25.3/Z rebecca purple
    41981 
    41982 > color #25.3/a:2058-2064 cornflower blue
    41983 
    41984 > color #25.3/a:2447-2451 gold
    41985 
    41986 > color #25.3/a:2499-2506 green yellow
    41987 
    41988 > color #25.3/a:2499-2506 green yellow target c
    41989 
    41990 > color #25.3/a:2451 green target a
    41991 
    41992 > ~show #25.3
    41993 
    41994 > ~hbonds #25.3
    41995 
    41996 > name to_show
    41997 > #25.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    41998 
    41999 > show to_show
    42000 
    42001 > ~cartoon #25.3
    42002 
    42003 > cartoon #25.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42004 
    42005 > transparency #25.3 60 target c
    42006 
    42007 > volume #23.3 color black transparency 0.8
    42008 
    42009 > volume zone #23.3 nearAtoms #25.3/a:2058-2064,2499-2506,2447,2450,2451 &
    42010 > sideonly range 2
    42011 
    42012 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J242_c3.png
    42013 > height 600 width 600 supersample 3
    42014 
    42015 > hide #!25.3 models
    42016 
    42017 > hide #!23.3 models
    42018 
    42019 > show #!25.4 models
    42020 
    42021 > show #!23.4 models
    42022 
    42023 > volume #23.4 level 0.1
    42024 
    42025 > hide #25.4
    42026 
    42027 > color #25.4/Y maroon
    42028 
    42029 > color #25.4/Z rebecca purple
    42030 
    42031 > color #25.4/a:2058-2064 cornflower blue
    42032 
    42033 > color #25.4/a:2447-2451 gold
    42034 
    42035 > color #25.4/a:2499-2506 green yellow
    42036 
    42037 > color #25.4/a:2499-2506 green yellow target c
    42038 
    42039 > color #25.4/a:2451 green target a
    42040 
    42041 > ~show #25.4
    42042 
    42043 > ~hbonds #25.4
    42044 
    42045 > name to_show
    42046 > #25.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42047 
    42048 > show to_show
    42049 
    42050 > ~cartoon #25.4
    42051 
    42052 > cartoon #25.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42053 
    42054 > transparency #25.4 60 target c
    42055 
    42056 > volume #23.4 color black transparency 0.8
    42057 
    42058 > volume zone #23.4 nearAtoms #25.4/a:2058-2064,2499-2506,2447,2450,2451 &
    42059 > sideonly range 2
    42060 
    42061 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J243_c4.png
    42062 > height 600 width 600 supersample 3
    42063 
    42064 > hide #!25.4 models
    42065 
    42066 > hide #!23.4 models
    42067 
    42068 > show #!25.5 models
    42069 
    42070 > show #!23.5 models
    42071 
    42072 > volume #23.5 level 0.1
    42073 
    42074 > hide #25.5
    42075 
    42076 > color #25.5/Y maroon
    42077 
    42078 > color #25.5/Z rebecca purple
    42079 
    42080 > color #25.5/a:2058-2064 cornflower blue
    42081 
    42082 > color #25.5/a:2447-2451 gold
    42083 
    42084 > color #25.5/a:2499-2506 green yellow
    42085 
    42086 > color #25.5/a:2499-2506 green yellow target c
    42087 
    42088 > color #25.5/a:2451 green target a
    42089 
    42090 > ~show #25.5
    42091 
    42092 > ~hbonds #25.5
    42093 
    42094 > name to_show
    42095 > #25.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42096 
    42097 > show to_show
    42098 
    42099 > ~cartoon #25.5
    42100 
    42101 > cartoon #25.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42102 
    42103 > transparency #25.5 60 target c
    42104 
    42105 > volume #23.5 color black transparency 0.8
    42106 
    42107 > volume zone #23.5 nearAtoms #25.5/a:2058-2064,2499-2506,2447,2450,2451 &
    42108 > sideonly range 2
    42109 
    42110 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J244_c5.png
    42111 > height 600 width 600 supersample 3
    42112 
    42113 > hide #!25.5 models
    42114 
    42115 > hide #!23.5 models
    42116 
    42117 > show #!25.6 models
    42118 
    42119 > show #!23.6 models
    42120 
    42121 > volume #23.6 level 0.1
    42122 
    42123 > hide #25.6
    42124 
    42125 > color #25.6/Y maroon
    42126 
    42127 > color #25.6/Z rebecca purple
    42128 
    42129 > color #25.6/a:2058-2064 cornflower blue
    42130 
    42131 > color #25.6/a:2447-2451 gold
    42132 
    42133 > color #25.6/a:2499-2506 green yellow
    42134 
    42135 > color #25.6/a:2499-2506 green yellow target c
    42136 
    42137 > color #25.6/a:2451 green target a
    42138 
    42139 > ~show #25.6
    42140 
    42141 > ~hbonds #25.6
    42142 
    42143 > name to_show
    42144 > #25.6/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42145 
    42146 > show to_show
    42147 
    42148 > ~cartoon #25.6
    42149 
    42150 > cartoon #25.6/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42151 
    42152 > transparency #25.6 60 target c
    42153 
    42154 > volume #23.6 color black transparency 0.8
    42155 
    42156 > volume zone #23.6 nearAtoms #25.6/a:2058-2064,2499-2506,2447,2450,2451 &
    42157 > sideonly range 2
    42158 
    42159 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J245_c6.png
    42160 > height 600 width 600 supersample 3
    42161 
    42162 > hide #!25.6 models
    42163 
    42164 > hide #!23.6 models
    42165 
    42166 > show #!25.7 models
    42167 
    42168 > show #!23.7 models
    42169 
    42170 > volume #23.7 level 0.1
    42171 
    42172 > hide #25.7
    42173 
    42174 > color #25.7/Y maroon
    42175 
    42176 > color #25.7/Z rebecca purple
    42177 
    42178 > color #25.7/a:2058-2064 cornflower blue
    42179 
    42180 > color #25.7/a:2447-2451 gold
    42181 
    42182 > color #25.7/a:2499-2506 green yellow
    42183 
    42184 > color #25.7/a:2499-2506 green yellow target c
    42185 
    42186 > color #25.7/a:2451 green target a
    42187 
    42188 > ~show #25.7
    42189 
    42190 > ~hbonds #25.7
    42191 
    42192 > name to_show
    42193 > #25.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42194 
    42195 > show to_show
    42196 
    42197 > ~cartoon #25.7
    42198 
    42199 > cartoon #25.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42200 
    42201 > transparency #25.7 60 target c
    42202 
    42203 > volume #23.7 color black transparency 0.8
    42204 
    42205 > volume zone #23.7 nearAtoms #25.7/a:2058-2064,2499-2506,2447,2450,2451 &
    42206 > sideonly range 2
    42207 
    42208 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J246_c7.png
    42209 > height 600 width 600 supersample 3
    42210 
    42211 > hide #!25.7 models
    42212 
    42213 > hide #!23.7 models
    42214 
    42215 > show #!25.8 models
    42216 
    42217 > show #!23.8 models
    42218 
    42219 > volume #23.8 level 0.1
    42220 
    42221 > hide #25.8
    42222 
    42223 > color #25.8/Y maroon
    42224 
    42225 > color #25.8/Z rebecca purple
    42226 
    42227 > color #25.8/a:2058-2064 cornflower blue
    42228 
    42229 > color #25.8/a:2447-2451 gold
    42230 
    42231 > color #25.8/a:2499-2506 green yellow
    42232 
    42233 > color #25.8/a:2499-2506 green yellow target c
    42234 
    42235 > color #25.8/a:2451 green target a
    42236 
    42237 > ~show #25.8
    42238 
    42239 > ~hbonds #25.8
    42240 
    42241 > name to_show
    42242 > #25.8/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42243 
    42244 > show to_show
    42245 
    42246 > ~cartoon #25.8
    42247 
    42248 > cartoon #25.8/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42249 
    42250 > transparency #25.8 60 target c
    42251 
    42252 > volume #23.8 color black transparency 0.8
    42253 
    42254 > volume zone #23.8 nearAtoms #25.8/a:2058-2064,2499-2506,2447,2450,2451 &
    42255 > sideonly range 2
    42256 
    42257 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J247_c8.png
    42258 > height 600 width 600 supersample 3
    42259 
    42260 > hide #!25.8 models
    42261 
    42262 > hide #!23.8 models
    42263 
    42264 > show #!25.9 models
    42265 
    42266 > show #!23.9 models
    42267 
    42268 > volume #23.9 level 0.1
    42269 
    42270 > hide #25.9
    42271 
    42272 > color #25.9/Y maroon
    42273 
    42274 > color #25.9/Z rebecca purple
    42275 
    42276 > color #25.9/a:2058-2064 cornflower blue
    42277 
    42278 > color #25.9/a:2447-2451 gold
    42279 
    42280 > color #25.9/a:2499-2506 green yellow
    42281 
    42282 > color #25.9/a:2499-2506 green yellow target c
    42283 
    42284 > color #25.9/a:2451 green target a
    42285 
    42286 > ~show #25.9
    42287 
    42288 > ~hbonds #25.9
    42289 
    42290 > name to_show
    42291 > #25.9/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42292 
    42293 > show to_show
    42294 
    42295 > ~cartoon #25.9
    42296 
    42297 > cartoon #25.9/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42298 
    42299 > transparency #25.9 60 target c
    42300 
    42301 > volume #23.9 color black transparency 0.8
    42302 
    42303 > volume zone #23.9 nearAtoms #25.9/a:2058-2064,2499-2506,2447,2450,2451 &
    42304 > sideonly range 2
    42305 
    42306 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J248_c9.png
    42307 > height 600 width 600 supersample 3
    42308 
    42309 > hide #!25.9 models
    42310 
    42311 > hide #!23.9 models
    42312 
    42313 > graphics quality 1
    42314 
    42315 > graphics quality 6
    42316 
    42317 > show #!1.2 models
    42318 
    42319 > show #!1.1 models
    42320 
    42321 > volume #1.1 level 0.015
    42322 
    42323 > hide #1.2
    42324 
    42325 > color #1.2/Y maroon
    42326 
    42327 > color #1.2/Z rebecca purple
    42328 
    42329 > color #1.2/a:2058-2064 cornflower blue
    42330 
    42331 > color #1.2/a:2447-2451 gold
    42332 
    42333 > color #1.2/a:2499-2506 green yellow
    42334 
    42335 > color #1.2/a:2499-2506 green yellow target c
    42336 
    42337 > ~show #1.2
    42338 
    42339 > ~hbonds #1.2
    42340 
    42341 > name to_show
    42342 > #1.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42343 
    42344 > show to_show
    42345 
    42346 > ~cartoon #1.2
    42347 
    42348 > cartoon #1.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42349 
    42350 > transparency #1.2 60 target c
    42351 
    42352 > volume #1.1 color black transparency 0.8
    42353 
    42354 > volume zone #1.1 nearAtoms #1.2/a:2058-2064,2499-2506,2447,2450,2451 &
    42355 > sideonly range 2
    42356 
    42357 > bond #1.2/Y:76@N3':101@C
    42358 
    42359 Created 0 bonds 
    42360 
    42361 > bond #1.2/Z:76@N3':101@C
    42362 
    42363 Created 0 bonds 
    42364 
    42365 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    42366 
    42367 > style #1.2/Y:101 ball
    42368 
    42369 Changed 8 atom styles 
    42370 
    42371 > style #1.2/Z:101 ball
    42372 
    42373 Changed 8 atom styles 
    42374 
    42375 > size #1.2/Y:101:76@N3' ballScale 0.10 stickRadius 0.06
    42376 
    42377 Changed 8 bond radii, 1 ball scales 
    42378 
    42379 > size #1.2/Z:101:76@N3' ballScale 0.10 stickRadius 0.06
    42380 
    42381 Changed 8 bond radii, 1 ball scales 
    42382 
    42383 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_8emm.png height
    42384 > 600 width 600 supersample 3
    42385 
    42386 > hide #!1.2 models
    42387 
    42388 > hide #!1.1 models
    42389 
    42390 > show #!1.7 models
    42391 
    42392 > show #!1.6 models
    42393 
    42394 > volume #1.6 level 0.01
    42395 
    42396 > hide #1.7
    42397 
    42398 > color #1.7/Y maroon
    42399 
    42400 > color #1.7/Z rebecca purple
    42401 
    42402 > color #1.7/a:2058-2064 cornflower blue
    42403 
    42404 > color #1.7/a:2447-2451 gold
    42405 
    42406 > color #1.7/a:2499-2506 green yellow
    42407 
    42408 > color #1.7/a:2499-2506 green yellow target c
    42409 
    42410 > ~show #1.7
    42411 
    42412 > ~hbonds #1.7
    42413 
    42414 > name to_show
    42415 > #1.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42416 
    42417 > show to_show
    42418 
    42419 > ~cartoon #1.7
    42420 
    42421 > cartoon #1.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42422 
    42423 > transparency #1.7 60 target c
    42424 
    42425 > volume #1.6 color black transparency 0.8
    42426 
    42427 > volume zone #1.6 nearAtoms #1.7/a:2058-2064,2499-2506,2447,2450,2451 &
    42428 > sideonly range 2
    42429 
    42430 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_8cgk.png height
    42431 > 600 width 600 supersample 3
    42432 
    42433 > hide #!1.7 models
    42434 
    42435 > hide #!1.6 models
    42436 
    42437 > show #!1.9 models
    42438 
    42439 > show #!1.8 models
    42440 
    42441 > volume #1.8 level 0.11
    42442 
    42443 > hide #1.9
    42444 
    42445 > color #1.9/Y maroon
    42446 
    42447 > color #1.9/Z rebecca purple
    42448 
    42449 > color #1.9/A:2058-2064 cornflower blue
    42450 
    42451 > color #1.9/A:2447-2451 gold
    42452 
    42453 > color #1.9/A:2499-2506 green yellow
    42454 
    42455 > color #1.9/A:2499-2506 green yellow target c
    42456 
    42457 > ~show #1.9
    42458 
    42459 > ~hbonds #1.9
    42460 
    42461 > name to_show
    42462 > #1.9/A:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42463 
    42464 > show to_show
    42465 
    42466 > ~cartoon #1.9
    42467 
    42468 > cartoon #1.9/A:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42469 
    42470 > transparency #1.9 60 target c
    42471 
    42472 > volume #1.8 color black transparency 0.8
    42473 
    42474 > volume zone #1.8 nearAtoms #1.9/A:2058-2064,2499-2506,2447,2450,2451 &
    42475 > sideonly range 2
    42476 
    42477 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_7bv8.png height
    42478 > 600 width 600 supersample 3
    42479 
    42480 > hide #!1.9 models
    42481 
    42482 > hide #!1.8 models
    42483 
    42484 > show #!1.11 models
    42485 
    42486 > show #!1.10 models
    42487 
    42488 > volume #1.10 level 0.025
    42489 
    42490 > hide #1.11
    42491 
    42492 > color #1.11/Y maroon
    42493 
    42494 > color #1.11/B8 rebecca purple
    42495 
    42496 > color #1.11/BA:2058-2064 cornflower blue
    42497 
    42498 > color #1.11/BA:2447-2451 gold
    42499 
    42500 > color #1.11/BA:2499-2506 green yellow
    42501 
    42502 > color #1.11/BA:2499-2506 green yellow target c
    42503 
    42504 > ~show #1.11
    42505 
    42506 > ~hbonds #1.11
    42507 
    42508 > name to_show
    42509 > #1.11/BA:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/B8:73-76,101
    42510 
    42511 > show to_show
    42512 
    42513 > ~cartoon #1.11
    42514 
    42515 > cartoon #1.11/BA:2058-2064,2499-2506,2447-2451/Y:73-76/B8:73-76
    42516 
    42517 > transparency #1.11 60 target c
    42518 
    42519 > volume #1.10 color black transparency 0.8
    42520 
    42521 > volume zone #1.10 nearAtoms #1.11/BA:2058-2064,2499-2506,2447,2450,2451 &
    42522 > sideonly range 2
    42523 
    42524 > bond #1.11/B5:24@C/B8:76@O3'
    42525 
    42526 Created 0 bonds 
    42527 
    42528 > cartoon #1.11/B5
    42529 
    42530 > style #1.11/B5' ball
    42531 
    42532 Changed 0 atom styles 
    42533 
    42534 > size #1.11/B5/B8:76@O3' ballScale 0.10 stickRadius 0.06
    42535 
    42536 Changed 152 bond radii, 1 ball scales 
    42537 
    42538 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_7o1a.png height
    42539 > 600 width 600 supersample 3
    42540 
    42541 > hide #!1.11 models
    42542 
    42543 > hide #!1.10 models
    42544 
    42545 > show #!1.14 models
    42546 
    42547 > show #!1.13 models
    42548 
    42549 > volume #1.13 level 0.01
    42550 
    42551 > hide #1.14
    42552 
    42553 > color #1.14/Y maroon
    42554 
    42555 > color #1.14/Z rebecca purple
    42556 
    42557 > color #1.14/a:2058-2064 cornflower blue
    42558 
    42559 > color #1.14/a:2447-2451 gold
    42560 
    42561 > color #1.14/a:2499-2506 green yellow
    42562 
    42563 > color #1.14/a:2499-2506 green yellow target c
    42564 
    42565 > ~show #1.14
    42566 
    42567 > ~hbonds #1.14
    42568 
    42569 > name to_show
    42570 > #1.14/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42571 
    42572 > show to_show
    42573 
    42574 > ~cartoon #1.14
    42575 
    42576 > cartoon #1.14/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42577 
    42578 > transparency #1.14 60 target c
    42579 
    42580 > volume #1.13 color black transparency 0.8
    42581 
    42582 > volume zone #1.13 nearAtoms #1.14/a:2058-2064,2499-2506,2447,2450,2451 &
    42583 > sideonly range 2
    42584 
    42585 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_8cam.png height
    42586 > 600 width 600 supersample 3
    42587 
    42588 > hide #!1.14 models
    42589 
    42590 > hide #!1.13 models
    42591 
    42592 > show #!6.10 models
    42593 
    42594 > show #!4.10 models
    42595 
    42596 > volume #4.10 level 0.55
    42597 
    42598 > hide #6.10
    42599 
    42600 > color #6.10/Y maroon
    42601 
    42602 > color #6.10/Z rebecca purple
    42603 
    42604 > color #6.10/a:2058-2064 cornflower blue
    42605 
    42606 > color #6.10/a:2447-2451 gold
    42607 
    42608 > color #6.10/a:2499-2506 green yellow
    42609 
    42610 > color #6.10/a:2499-2506 green yellow target c
    42611 
    42612 > ~show #6.10
    42613 
    42614 > ~hbonds #6.10
    42615 
    42616 > name to_show
    42617 > #6.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42618 
    42619 > show to_show
    42620 
    42621 > ~cartoon #6.10
    42622 
    42623 > cartoon #6.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42624 
    42625 > transparency #6.10 60 target c
    42626 
    42627 > volume #4.10 color black transparency 0.8
    42628 
    42629 > volume zone #4.10 nearAtoms #6.10/a:2058-2064,2499-2506,2447,2450,2451 &
    42630 > sideonly range 2
    42631 
    42632 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J83_cl0.png
    42633 > height 600 width 600 supersample 3
    42634 
    42635 > hide #!6.10 models
    42636 
    42637 > hide #!4.10 models
    42638 
    42639 > show #!6.1 models
    42640 
    42641 > show #!4.1 models
    42642 
    42643 > volume #4.1 level 0.6
    42644 
    42645 > hide #6.1
    42646 
    42647 > color #6.1/Y maroon
    42648 
    42649 > color #6.1/Z rebecca purple
    42650 
    42651 > color #6.1/a:2058-2064 cornflower blue
    42652 
    42653 > color #6.1/a:2447-2451 gold
    42654 
    42655 > color #6.1/a:2499-2506 green yellow
    42656 
    42657 > color #6.1/a:2499-2506 green yellow target c
    42658 
    42659 > ~show #6.1
    42660 
    42661 > ~hbonds #6.1
    42662 
    42663 > name to_show
    42664 > #6.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42665 
    42666 > show to_show
    42667 
    42668 > ~cartoon #6.1
    42669 
    42670 > cartoon #6.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42671 
    42672 > transparency #6.1 60 target c
    42673 
    42674 > volume #4.1 color black transparency 0.8
    42675 
    42676 > volume zone #4.1 nearAtoms #6.1/a:2058-2064,2499-2506,2447,2450,2451 &
    42677 > sideonly range 2
    42678 
    42679 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J84_cl1.png
    42680 > height 600 width 600 supersample 3
    42681 
    42682 > hide #!6.1 models
    42683 
    42684 > hide #!4.1 models
    42685 
    42686 > show #!6.2 models
    42687 
    42688 > show #!4.2 models
    42689 
    42690 > volume #4.2 level 0.7
    42691 
    42692 > hide #6.2
    42693 
    42694 > color #6.2/Y maroon
    42695 
    42696 > color #6.2/Z rebecca purple
    42697 
    42698 > color #6.2/a:2058-2064 cornflower blue
    42699 
    42700 > color #6.2/a:2447-2451 gold
    42701 
    42702 > color #6.2/a:2499-2506 green yellow
    42703 
    42704 > color #6.2/a:2499-2506 green yellow target c
    42705 
    42706 > ~show #6.2
    42707 
    42708 > ~hbonds #6.2
    42709 
    42710 > name to_show
    42711 > #6.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42712 
    42713 > show to_show
    42714 
    42715 > ~cartoon #6.2
    42716 
    42717 > cartoon #6.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42718 
    42719 > transparency #6.2 60 target c
    42720 
    42721 > volume #4.2 color black transparency 0.8
    42722 
    42723 > volume zone #4.2 nearAtoms #6.2/a:2058-2064,2499-2506,2447,2450,2451 &
    42724 > sideonly range 2
    42725 
    42726 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J85_cl2.png
    42727 > height 600 width 600 supersample 3
    42728 
    42729 > hide #!6.2 models
    42730 
    42731 > hide #!4.2 models
    42732 
    42733 > show #!6.3 models
    42734 
    42735 > show #!4.3 models
    42736 
    42737 > volume #4.3 level 0.6
    42738 
    42739 > hide #6.3
    42740 
    42741 > color #6.3/Y maroon
    42742 
    42743 > color #6.3/Z rebecca purple
    42744 
    42745 > color #6.3/a:2058-2064 cornflower blue
    42746 
    42747 > color #6.3/a:2447-2451 gold
    42748 
    42749 > color #6.3/a:2499-2506 green yellow
    42750 
    42751 > color #6.3/a:2499-2506 green yellow target c
    42752 
    42753 > ~show #6.3
    42754 
    42755 > ~hbonds #6.3
    42756 
    42757 > name to_show
    42758 > #6.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42759 
    42760 > show to_show
    42761 
    42762 > ~cartoon #6.3
    42763 
    42764 > cartoon #6.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42765 
    42766 > transparency #6.3 60 target c
    42767 
    42768 > volume #4.3 color black transparency 0.8
    42769 
    42770 > volume zone #4.3 nearAtoms #6.3/a:2058-2064,2499-2506,2447,2450,2451 &
    42771 > sideonly range 2
    42772 
    42773 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J86_cl3.png
    42774 > height 600 width 600 supersample 3
    42775 
    42776 > hide #!6.3 models
    42777 
    42778 > hide #!4.3 models
    42779 
    42780 > show #!6.4 models
    42781 
    42782 > show #!4.4 models
    42783 
    42784 > volume #4.4 level 0.65
    42785 
    42786 > hide #6.4
    42787 
    42788 > color #6.4/Y maroon
    42789 
    42790 > color #6.4/Z rebecca purple
    42791 
    42792 > color #6.4/a:2058-2064 cornflower blue
    42793 
    42794 > color #6.4/a:2447-2451 gold
    42795 
    42796 > color #6.4/a:2499-2506 green yellow
    42797 
    42798 > color #6.4/a:2499-2506 green yellow target c
    42799 
    42800 > ~show #6.4
    42801 
    42802 > ~hbonds #6.4
    42803 
    42804 > name to_show
    42805 > #6.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42806 
    42807 > show to_show
    42808 
    42809 > ~cartoon #6.4
    42810 
    42811 > cartoon #6.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42812 
    42813 > transparency #6.4 60 target c
    42814 
    42815 > volume #4.4 color black transparency 0.8
    42816 
    42817 > volume zone #4.4 nearAtoms #6.4/a:2058-2064,2499-2506,2447,2450,2451 &
    42818 > sideonly range 2
    42819 
    42820 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J87_cl4.png
    42821 > height 600 width 600 supersample 3
    42822 
    42823 > hide #!6.4 models
    42824 
    42825 > hide #!4.4 models
    42826 
    42827 > show #!6.5 models
    42828 
    42829 > show #!4.5 models
    42830 
    42831 > volume #4.5 level 0.65
    42832 
    42833 > hide #6.5
    42834 
    42835 > color #6.5/Y maroon
    42836 
    42837 > color #6.5/Z rebecca purple
    42838 
    42839 > color #6.5/a:2058-2064 cornflower blue
    42840 
    42841 > color #6.5/a:2447-2451 gold
    42842 
    42843 > color #6.5/a:2499-2506 green yellow
    42844 
    42845 > color #6.5/a:2499-2506 green yellow target c
    42846 
    42847 > ~show #6.5
    42848 
    42849 > ~hbonds #6.5
    42850 
    42851 > name to_show
    42852 > #6.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42853 
    42854 > show to_show
    42855 
    42856 > ~cartoon #6.5
    42857 
    42858 > cartoon #6.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42859 
    42860 > transparency #6.5 60 target c
    42861 
    42862 > volume #4.5 color black transparency 0.8
    42863 
    42864 > volume zone #4.5 nearAtoms #6.5/a:2058-2064,2499-2506,2447,2450,2451 &
    42865 > sideonly range 2
    42866 
    42867 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J88_cl5.png
    42868 > height 600 width 600 supersample 3
    42869 
    42870 > hide #!6.5 models
    42871 
    42872 > hide #!4.5 models
    42873 
    42874 > show #!6.6 models
    42875 
    42876 > show #!4.6 models
    42877 
    42878 > volume #4.6 level 0.6
    42879 
    42880 > hide #6.6
    42881 
    42882 > color #6.6/Y maroon
    42883 
    42884 > color #6.6/Z rebecca purple
    42885 
    42886 > color #6.6/a:2058-2064 cornflower blue
    42887 
    42888 > color #6.6/a:2447-2451 gold
    42889 
    42890 > color #6.6/a:2499-2506 green yellow
    42891 
    42892 > color #6.6/a:2499-2506 green yellow target c
    42893 
    42894 > ~show #6.6
    42895 
    42896 > ~hbonds #6.6
    42897 
    42898 > name to_show
    42899 > #6.6/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42900 
    42901 > show to_show
    42902 
    42903 > ~cartoon #6.6
    42904 
    42905 > cartoon #6.6/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42906 
    42907 > transparency #6.6 60 target c
    42908 
    42909 > volume #4.6 color black transparency 0.8
    42910 
    42911 > volume zone #4.6 nearAtoms #6.6/a:2058-2064,2499-2506,2447,2450,2451 &
    42912 > sideonly range 2
    42913 
    42914 > ~show #6.6/a:2059-2060
    42915 
    42916 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J89_cl6.png
    42917 > height 600 width 600 supersample 3
    42918 
    42919 > hide #!6.6 models
    42920 
    42921 > hide #!4.6 models
    42922 
    42923 > show #!6.7 models
    42924 
    42925 > show #!4.7 models
    42926 
    42927 > volume #4.7 level 0.65
    42928 
    42929 > hide #6.7
    42930 
    42931 > color #6.7/Y maroon
    42932 
    42933 > color #6.7/Z rebecca purple
    42934 
    42935 > color #6.7/a:2058-2064 cornflower blue
    42936 
    42937 > color #6.7/a:2447-2451 gold
    42938 
    42939 > color #6.7/a:2499-2506 green yellow
    42940 
    42941 > color #6.7/a:2499-2506 green yellow target c
    42942 
    42943 > ~show #6.7
    42944 
    42945 > ~hbonds #6.7
    42946 
    42947 > name to_show
    42948 > #6.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42949 
    42950 > show to_show
    42951 
    42952 > ~cartoon #6.7
    42953 
    42954 > cartoon #6.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    42955 
    42956 > transparency #6.7 60 target c
    42957 
    42958 > volume #4.7 color black transparency 0.8
    42959 
    42960 > volume zone #4.7 nearAtoms #6.7/a:2058-2064,2499-2506,2447,2450,2451 &
    42961 > sideonly range 2
    42962 
    42963 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J90_cl7.png
    42964 > height 600 width 600 supersample 3
    42965 
    42966 > hide #!6.7 models
    42967 
    42968 > hide #!4.7 models
    42969 
    42970 > show #!6.8 models
    42971 
    42972 > show #!4.8 models
    42973 
    42974 > volume #4.8 level 0.55
    42975 
    42976 > hide #6.8
    42977 
    42978 > color #6.8/Y maroon
    42979 
    42980 > color #6.8/Z rebecca purple
    42981 
    42982 > color #6.8/a:2058-2064 cornflower blue
    42983 
    42984 > color #6.8/a:2447-2451 gold
    42985 
    42986 > color #6.8/a:2499-2506 green yellow
    42987 
    42988 > color #6.8/a:2499-2506 green yellow target c
    42989 
    42990 > ~show #6.8
    42991 
    42992 > ~hbonds #6.8
    42993 
    42994 > name to_show
    42995 > #6.8/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    42996 
    42997 > show to_show
    42998 
    42999 > ~cartoon #6.8
    43000 
    43001 > cartoon #6.8/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43002 
    43003 > transparency #6.8 60 target c
    43004 
    43005 > volume #4.8 color black transparency 0.8
    43006 
    43007 > volume zone #4.8 nearAtoms #6.8/a:2058-2064,2499-2506,2447,2450,2451 &
    43008 > sideonly range 2
    43009 
    43010 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J91_cl8.png
    43011 > height 600 width 600 supersample 3
    43012 
    43013 > hide #!6.8 models
    43014 
    43015 > hide #!4.8 models
    43016 
    43017 > show #!6.9 models
    43018 
    43019 > show #!4.9 models
    43020 
    43021 > volume #4.9 level 0.55
    43022 
    43023 > hide #6.9
    43024 
    43025 > color #6.9/Y maroon
    43026 
    43027 > color #6.9/Z rebecca purple
    43028 
    43029 > color #6.9/a:2058-2064 cornflower blue
    43030 
    43031 > color #6.9/a:2447-2451 gold
    43032 
    43033 > color #6.9/a:2499-2506 green yellow
    43034 
    43035 > color #6.9/a:2499-2506 green yellow target c
    43036 
    43037 > ~show #6.9
    43038 
    43039 > ~hbonds #6.9
    43040 
    43041 > name to_show
    43042 > #6.9/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43043 
    43044 > show to_show
    43045 
    43046 > ~cartoon #6.9
    43047 
    43048 > cartoon #6.9/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43049 
    43050 > transparency #6.9 60 target c
    43051 
    43052 > volume #4.9 color black transparency 0.8
    43053 
    43054 > volume zone #4.9 nearAtoms #6.9/a:2058-2064,2499-2506,2447,2450,2451 &
    43055 > sideonly range 2
    43056 
    43057 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d9_J92_cl9.png
    43058 > height 600 width 600 supersample 3
    43059 
    43060 > hide #!6.9 models
    43061 
    43062 > hide #!4.9 models
    43063 
    43064 > show #!14.10 models
    43065 
    43066 > show #!12.10 models
    43067 
    43068 > volume #12.10 level 0.5
    43069 
    43070 > hide #14.10
    43071 
    43072 > color #14.10/Y maroon
    43073 
    43074 > color #14.10/Z rebecca purple
    43075 
    43076 > color #14.10/a:2058-2064 cornflower blue
    43077 
    43078 > color #14.10/a:2447-2451 gold
    43079 
    43080 > color #14.10/a:2499-2506 green yellow
    43081 
    43082 > color #14.10/a:2499-2506 green yellow target c
    43083 
    43084 > ~show #14.10
    43085 
    43086 > ~hbonds #14.10
    43087 
    43088 > name to_show
    43089 > #14.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43090 
    43091 > show to_show
    43092 
    43093 > ~cartoon #14.10
    43094 
    43095 > cartoon #14.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43096 
    43097 > transparency #14.10 60 target c
    43098 
    43099 > volume #12.10 color black transparency 0.8
    43100 
    43101 > volume zone #12.10 nearAtoms #14.10/a:2058-2064,2499-2506,2447,2450,2451 &
    43102 > sideonly range 2
    43103 
    43104 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J53_c0.png
    43105 > height 600 width 600 supersample 3
    43106 
    43107 > hide #!14.10 models
    43108 
    43109 > hide #!12.10 models
    43110 
    43111 > show #!14.1 models
    43112 
    43113 > show #!12.1 models
    43114 
    43115 > volume #12.1 level 0.5
    43116 
    43117 > hide #14.1
    43118 
    43119 > color #14.1/Y maroon
    43120 
    43121 > color #14.1/Z rebecca purple
    43122 
    43123 > color #14.1/a:2058-2064 cornflower blue
    43124 
    43125 > color #14.1/a:2447-2451 gold
    43126 
    43127 > color #14.1/a:2499-2506 green yellow
    43128 
    43129 > color #14.1/a:2499-2506 green yellow target c
    43130 
    43131 > ~show #14.1
    43132 
    43133 > ~hbonds #14.1
    43134 
    43135 > name to_show
    43136 > #14.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43137 
    43138 > show to_show
    43139 
    43140 > ~cartoon #14.1
    43141 
    43142 > cartoon #14.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43143 
    43144 > transparency #14.1 60 target c
    43145 
    43146 > volume #12.1 color black transparency 0.8
    43147 
    43148 > volume zone #12.1 nearAtoms #14.1/a:2058-2064,2499-2506,2447,2450,2451 &
    43149 > sideonly range 2
    43150 
    43151 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J54_c1.png
    43152 > height 600 width 600 supersample 3
    43153 
    43154 > hide #!14.1 models
    43155 
    43156 > hide #!12.1 models
    43157 
    43158 > show #!14.2 models
    43159 
    43160 > show #!12.2 models
    43161 
    43162 > volume #12.2 level 0.5
    43163 
    43164 > hide #14.2
    43165 
    43166 > color #14.2/Y maroon
    43167 
    43168 > color #14.2/Z rebecca purple
    43169 
    43170 > color #14.2/a:2058-2064 cornflower blue
    43171 
    43172 > color #14.2/a:2447-2451 gold
    43173 
    43174 > color #14.2/a:2499-2506 green yellow
    43175 
    43176 > color #14.2/a:2499-2506 green yellow target c
    43177 
    43178 > ~show #14.2
    43179 
    43180 > ~hbonds #14.2
    43181 
    43182 > name to_show
    43183 > #14.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43184 
    43185 > show to_show
    43186 
    43187 > ~cartoon #14.2
    43188 
    43189 > cartoon #14.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43190 
    43191 > transparency #14.2 60 target c
    43192 
    43193 > volume #12.2 color black transparency 0.8
    43194 
    43195 > volume zone #12.2 nearAtoms #14.2/a:2058-2064,2499-2506,2447,2450,2451 &
    43196 > sideonly range 2
    43197 
    43198 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J55_c2.png
    43199 > height 600 width 600 supersample 3
    43200 
    43201 > hide #!14.2 models
    43202 
    43203 > hide #!12.2 models
    43204 
    43205 > show #!14.3 models
    43206 
    43207 > show #!12.3 models
    43208 
    43209 > volume #12.3 level 0.5
    43210 
    43211 > hide #14.3
    43212 
    43213 > color #14.3/Y maroon
    43214 
    43215 > color #14.3/Z rebecca purple
    43216 
    43217 > color #14.3/a:2058-2064 cornflower blue
    43218 
    43219 > color #14.3/a:2447-2451 gold
    43220 
    43221 > color #14.3/a:2499-2506 green yellow
    43222 
    43223 > color #14.3/a:2499-2506 green yellow target c
    43224 
    43225 > ~show #14.3
    43226 
    43227 > ~hbonds #14.3
    43228 
    43229 > name to_show
    43230 > #14.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43231 
    43232 > show to_show
    43233 
    43234 > ~cartoon #14.3
    43235 
    43236 > cartoon #14.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43237 
    43238 > transparency #14.3 60 target c
    43239 
    43240 > volume #12.3 color black transparency 0.8
    43241 
    43242 > volume zone #12.3 nearAtoms #14.3/a:2058-2064,2499-2506,2447,2450,2451 &
    43243 > sideonly range 2
    43244 
    43245 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J56_c3.png
    43246 > height 600 width 600 supersample 3
    43247 
    43248 > hide #!14.3 models
    43249 
    43250 > hide #!12.3 models
    43251 
    43252 > show #!14.4 models
    43253 
    43254 > show #!12.4 models
    43255 
    43256 > volume #12.4 level 0.5
    43257 
    43258 > hide #14.4
    43259 
    43260 > color #14.4/Y maroon
    43261 
    43262 > color #14.4/Z rebecca purple
    43263 
    43264 > color #14.4/a:2058-2064 cornflower blue
    43265 
    43266 > color #14.4/a:2447-2451 gold
    43267 
    43268 > color #14.4/a:2499-2506 green yellow
    43269 
    43270 > color #14.4/a:2499-2506 green yellow target c
    43271 
    43272 > ~show #14.4
    43273 
    43274 > ~hbonds #14.4
    43275 
    43276 > name to_show
    43277 > #14.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43278 
    43279 > show to_show
    43280 
    43281 > ~cartoon #14.4
    43282 
    43283 > cartoon #14.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43284 
    43285 > transparency #14.4 60 target c
    43286 
    43287 > volume #12.4 color black transparency 0.8
    43288 
    43289 > volume zone #12.4 nearAtoms #14.4/a:2058-2064,2499-2506,2447,2450,2451 &
    43290 > sideonly range 2
    43291 
    43292 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J57_c4.png
    43293 > height 600 width 600 supersample 3
    43294 
    43295 > hide #!14.4 models
    43296 
    43297 > hide #!12.4 models
    43298 
    43299 > show #!14.5 models
    43300 
    43301 > show #!12.5 models
    43302 
    43303 > volume #12.5 level 0.5
    43304 
    43305 > hide #14.5
    43306 
    43307 > color #14.5/Y maroon
    43308 
    43309 > color #14.5/Z rebecca purple
    43310 
    43311 > color #14.5/a:2058-2064 cornflower blue
    43312 
    43313 > color #14.5/a:2447-2451 gold
    43314 
    43315 > color #14.5/a:2499-2506 green yellow
    43316 
    43317 > color #14.5/a:2499-2506 green yellow target c
    43318 
    43319 > ~show #14.5
    43320 
    43321 > ~hbonds #14.5
    43322 
    43323 > name to_show
    43324 > #14.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43325 
    43326 > show to_show
    43327 
    43328 > ~cartoon #14.5
    43329 
    43330 > cartoon #14.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43331 
    43332 > transparency #14.5 60 target c
    43333 
    43334 > volume #12.5 color black transparency 0.8
    43335 
    43336 > volume zone #12.5 nearAtoms #14.5/a:2058-2064,2499-2506,2447,2450,2451 &
    43337 > sideonly range 2
    43338 
    43339 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J58_c5.png
    43340 > height 600 width 600 supersample 3
    43341 
    43342 > hide #!14.5 models
    43343 
    43344 > hide #!12.5 models
    43345 
    43346 > show #!14.6 models
    43347 
    43348 > show #!12.6 models
    43349 
    43350 > volume #12.6 level 0.5
    43351 
    43352 > hide #14.6
    43353 
    43354 > color #14.6/Y maroon
    43355 
    43356 > color #14.6/Z rebecca purple
    43357 
    43358 > color #14.6/a:2058-2064 cornflower blue
    43359 
    43360 > color #14.6/a:2447-2451 gold
    43361 
    43362 > color #14.6/a:2499-2506 green yellow
    43363 
    43364 > color #14.6/a:2499-2506 green yellow target c
    43365 
    43366 > ~show #14.6
    43367 
    43368 > ~hbonds #14.6
    43369 
    43370 > name to_show
    43371 > #14.6/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43372 
    43373 > show to_show
    43374 
    43375 > ~cartoon #14.6
    43376 
    43377 > cartoon #14.6/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43378 
    43379 > transparency #14.6 60 target c
    43380 
    43381 > volume #12.6 color black transparency 0.8
    43382 
    43383 > volume zone #12.6 nearAtoms #14.6/a:2058-2064,2499-2506,2447,2450,2451 &
    43384 > sideonly range 2
    43385 
    43386 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J59_c6.png
    43387 > height 600 width 600 supersample 3
    43388 
    43389 > hide #!14.6 models
    43390 
    43391 > hide #!12.6 models
    43392 
    43393 > show #!14.7 models
    43394 
    43395 > show #!12.7 models
    43396 
    43397 > volume #12.7 level 0.5
    43398 
    43399 > hide #14.7
    43400 
    43401 > color #14.7/Y maroon
    43402 
    43403 > color #14.7/Z rebecca purple
    43404 
    43405 > color #14.7/a:2058-2064 cornflower blue
    43406 
    43407 > color #14.7/a:2447-2451 gold
    43408 
    43409 > color #14.7/a:2499-2506 green yellow
    43410 
    43411 > color #14.7/a:2499-2506 green yellow target c
    43412 
    43413 > ~show #14.7
    43414 
    43415 > ~hbonds #14.7
    43416 
    43417 > name to_show
    43418 > #14.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43419 
    43420 > show to_show
    43421 
    43422 > ~cartoon #14.7
    43423 
    43424 > cartoon #14.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43425 
    43426 > transparency #14.7 60 target c
    43427 
    43428 > volume #12.7 color black transparency 0.8
    43429 
    43430 > volume zone #12.7 nearAtoms #14.7/a:2058-2064,2499-2506,2447,2450,2451 &
    43431 > sideonly range 2
    43432 
    43433 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J60_c7.png
    43434 > height 600 width 600 supersample 3
    43435 
    43436 > hide #!14.7 models
    43437 
    43438 > hide #!12.7 models
    43439 
    43440 > show #!14.8 models
    43441 
    43442 > show #!12.8 models
    43443 
    43444 > volume #12.8 level 0.5
    43445 
    43446 > hide #14.8
    43447 
    43448 > color #14.8/Y maroon
    43449 
    43450 > color #14.8/Z rebecca purple
    43451 
    43452 > color #14.8/a:2058-2064 cornflower blue
    43453 
    43454 > color #14.8/a:2447-2451 gold
    43455 
    43456 > color #14.8/a:2499-2506 green yellow
    43457 
    43458 > color #14.8/a:2499-2506 green yellow target c
    43459 
    43460 > ~show #14.8
    43461 
    43462 > ~hbonds #14.8
    43463 
    43464 > name to_show
    43465 > #14.8/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43466 
    43467 > show to_show
    43468 
    43469 > ~cartoon #14.8
    43470 
    43471 > cartoon #14.8/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43472 
    43473 > transparency #14.8 60 target c
    43474 
    43475 > volume #12.8 color black transparency 0.8
    43476 
    43477 > volume zone #12.8 nearAtoms #14.8/a:2058-2064,2499-2506,2447,2450,2451 &
    43478 > sideonly range 2
    43479 
    43480 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J61_c8.png
    43481 > height 600 width 600 supersample 3
    43482 
    43483 > hide #!14.8 models
    43484 
    43485 > hide #!12.8 models
    43486 
    43487 > show #!14.9 models
    43488 
    43489 > show #!12.9 models
    43490 
    43491 > volume #12.9 level 0.5
    43492 
    43493 > hide #14.9
    43494 
    43495 > color #14.9/Y maroon
    43496 
    43497 > color #14.9/Z rebecca purple
    43498 
    43499 > color #14.9/a:2058-2064 cornflower blue
    43500 
    43501 > color #14.9/a:2447-2451 gold
    43502 
    43503 > color #14.9/a:2499-2506 green yellow
    43504 
    43505 > color #14.9/a:2499-2506 green yellow target c
    43506 
    43507 > ~show #14.9
    43508 
    43509 > ~hbonds #14.9
    43510 
    43511 > name to_show
    43512 > #14.9/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43513 
    43514 > show to_show
    43515 
    43516 > ~cartoon #14.9
    43517 
    43518 > cartoon #14.9/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43519 
    43520 > transparency #14.9 60 target c
    43521 
    43522 > volume #12.9 color black transparency 0.8
    43523 
    43524 > volume zone #12.9 nearAtoms #14.9/a:2058-2064,2499-2506,2447,2450,2451 &
    43525 > sideonly range 2
    43526 
    43527 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_d10_J62_c9.png
    43528 > height 600 width 600 supersample 3
    43529 
    43530 > hide #!14.9 models
    43531 
    43532 > hide #!12.9 models
    43533 
    43534 > show #!22.1 models
    43535 
    43536 > show #!21.1 models
    43537 
    43538 > volume #21.1 level 0.4
    43539 
    43540 > hide #22.1
    43541 
    43542 > color #22.1/Y maroon
    43543 
    43544 > color #22.1/Z rebecca purple
    43545 
    43546 > color #22.1/a:2058-2064 cornflower blue
    43547 
    43548 > color #22.1/a:2447-2451 gold
    43549 
    43550 > color #22.1/a:2499-2506 green yellow
    43551 
    43552 > color #22.1/a:2499-2506 green yellow target c
    43553 
    43554 > ~show #22.1
    43555 
    43556 > ~hbonds #22.1
    43557 
    43558 > name to_show
    43559 > #22.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43560 
    43561 > show to_show
    43562 
    43563 > ~cartoon #22.1
    43564 
    43565 > cartoon #22.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43566 
    43567 > transparency #22.1 60 target c
    43568 
    43569 > volume #21.1 color black transparency 0.8
    43570 
    43571 > volume zone #21.1 nearAtoms #22.1/a:2058-2064,2499-2506,2447,2450,2451 &
    43572 > sideonly range 2
    43573 
    43574 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J111_ape.png
    43575 > height 600 width 600 supersample 3
    43576 
    43577 > hide #!22.1 models
    43578 
    43579 > hide #!21.1 models
    43580 
    43581 > show #!22.2 models
    43582 
    43583 > show #!21.2 models
    43584 
    43585 > volume #21.2 level 0.4
    43586 
    43587 > hide #22.2
    43588 
    43589 > color #22.2/Y maroon
    43590 
    43591 > color #22.2/Z rebecca purple
    43592 
    43593 > color #22.2/a:2058-2064 cornflower blue
    43594 
    43595 > color #22.2/a:2447-2451 gold
    43596 
    43597 > color #22.2/a:2499-2506 green yellow
    43598 
    43599 > color #22.2/a:2499-2506 green yellow target c
    43600 
    43601 > ~show #22.2
    43602 
    43603 > ~hbonds #22.2
    43604 
    43605 > name to_show
    43606 > #22.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43607 
    43608 > show to_show
    43609 
    43610 > ~cartoon #22.2
    43611 
    43612 > cartoon #22.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43613 
    43614 > transparency #22.2 60 target c
    43615 
    43616 > volume #21.2 color black transparency 0.8
    43617 
    43618 > volume zone #21.2 nearAtoms #22.2/a:2058-2064,2499-2506,2447,2450,2451 &
    43619 > sideonly range 2
    43620 
    43621 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J112_ap.png
    43622 > height 600 width 600 supersample 3
    43623 
    43624 > hide #!22.2 models
    43625 
    43626 > hide #!21.2 models
    43627 
    43628 > show #!22.3 models
    43629 
    43630 > show #!21.3 models
    43631 
    43632 > volume #21.3 level 0.4
    43633 
    43634 > hide #22.3
    43635 
    43636 > color #22.3/Y maroon
    43637 
    43638 > color #22.3/Z rebecca purple
    43639 
    43640 > color #22.3/a:2058-2064 cornflower blue
    43641 
    43642 > color #22.3/a:2447-2451 gold
    43643 
    43644 > color #22.3/a:2499-2506 green yellow
    43645 
    43646 > color #22.3/a:2499-2506 green yellow target c
    43647 
    43648 > ~show #22.3
    43649 
    43650 > ~hbonds #22.3
    43651 
    43652 > name to_show
    43653 > #22.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43654 
    43655 > show to_show
    43656 
    43657 > ~cartoon #22.3
    43658 
    43659 > cartoon #22.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43660 
    43661 > transparency #22.3 60 target c
    43662 
    43663 > volume #21.3 color black transparency 0.8
    43664 
    43665 > volume zone #21.3 nearAtoms #22.3/a:2058-2064,2499-2506,2447,2450,2451 &
    43666 > sideonly range 2
    43667 
    43668 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J113_pe.png
    43669 > height 600 width 600 supersample 3
    43670 
    43671 > hide #!22.3 models
    43672 
    43673 > hide #!21.3 models
    43674 
    43675 > show #!22.4 models
    43676 
    43677 > show #!21.4 models
    43678 
    43679 > volume #21.4 level 0.4
    43680 
    43681 > hide #22.4
    43682 
    43683 > color #22.4/Y maroon
    43684 
    43685 > color #22.4/Z rebecca purple
    43686 
    43687 > color #22.4/a:2058-2064 cornflower blue
    43688 
    43689 > color #22.4/a:2447-2451 gold
    43690 
    43691 > color #22.4/a:2499-2506 green yellow
    43692 
    43693 > color #22.4/a:2499-2506 green yellow target c
    43694 
    43695 > ~show #22.4
    43696 
    43697 > ~hbonds #22.4
    43698 
    43699 > name to_show
    43700 > #22.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43701 
    43702 > show to_show
    43703 
    43704 > ~cartoon #22.4
    43705 
    43706 > cartoon #22.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43707 
    43708 > transparency #22.4 60 target c
    43709 
    43710 > volume #21.4 color black transparency 0.8
    43711 
    43712 > volume zone #21.4 nearAtoms #22.4/a:2058-2064,2499-2506,2447,2450,2451 &
    43713 > sideonly range 2
    43714 
    43715 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J124_e.png
    43716 > height 600 width 600 supersample 3
    43717 
    43718 > hide #!22.4 models
    43719 
    43720 > hide #!21.4 models
    43721 
    43722 > show #!25.10 models
    43723 
    43724 > show #!23.10 models
    43725 
    43726 > volume #23.10 level 0.1
    43727 
    43728 > hide #25.10
    43729 
    43730 > color #25.10/Y maroon
    43731 
    43732 > color #25.10/Z rebecca purple
    43733 
    43734 > color #25.10/a:2058-2064 cornflower blue
    43735 
    43736 > color #25.10/a:2447-2451 gold
    43737 
    43738 > color #25.10/a:2499-2506 green yellow
    43739 
    43740 > color #25.10/a:2499-2506 green yellow target c
    43741 
    43742 > ~show #25.10
    43743 
    43744 > ~hbonds #25.10
    43745 
    43746 > name to_show
    43747 > #25.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43748 
    43749 > show to_show
    43750 
    43751 > ~cartoon #25.10
    43752 
    43753 > cartoon #25.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43754 
    43755 > transparency #25.10 60 target c
    43756 
    43757 > volume #23.10 color black transparency 0.8
    43758 
    43759 > volume zone #23.10 nearAtoms #25.10/a:2058-2064,2499-2506,2447,2450,2451 &
    43760 > sideonly range 2
    43761 
    43762 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J239_c0.png
    43763 > height 600 width 600 supersample 3
    43764 
    43765 > hide #!25.10 models
    43766 
    43767 > hide #!23.10 models
    43768 
    43769 > show #!25.1 models
    43770 
    43771 > show #!23.1 models
    43772 
    43773 > volume #23.1 level 0.1
    43774 
    43775 > hide #25.1
    43776 
    43777 > color #25.1/Y maroon
    43778 
    43779 > color #25.1/Z rebecca purple
    43780 
    43781 > color #25.1/a:2058-2064 cornflower blue
    43782 
    43783 > color #25.1/a:2447-2451 gold
    43784 
    43785 > color #25.1/a:2499-2506 green yellow
    43786 
    43787 > color #25.1/a:2499-2506 green yellow target c
    43788 
    43789 > ~show #25.1
    43790 
    43791 > ~hbonds #25.1
    43792 
    43793 > name to_show
    43794 > #25.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43795 
    43796 > show to_show
    43797 
    43798 > ~cartoon #25.1
    43799 
    43800 > cartoon #25.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43801 
    43802 > transparency #25.1 60 target c
    43803 
    43804 > volume #23.1 color black transparency 0.8
    43805 
    43806 > volume zone #23.1 nearAtoms #25.1/a:2058-2064,2499-2506,2447,2450,2451 &
    43807 > sideonly range 2
    43808 
    43809 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J240_c1.png
    43810 > height 600 width 600 supersample 3
    43811 
    43812 > hide #!25.1 models
    43813 
    43814 > hide #!23.1 models
    43815 
    43816 > show #!25.2 models
    43817 
    43818 > show #!23.2 models
    43819 
    43820 > volume #23.2 level 0.1
    43821 
    43822 > hide #25.2
    43823 
    43824 > color #25.2/Y maroon
    43825 
    43826 > color #25.2/Z rebecca purple
    43827 
    43828 > color #25.2/a:2058-2064 cornflower blue
    43829 
    43830 > color #25.2/a:2447-2451 gold
    43831 
    43832 > color #25.2/a:2499-2506 green yellow
    43833 
    43834 > color #25.2/a:2499-2506 green yellow target c
    43835 
    43836 > ~show #25.2
    43837 
    43838 > ~hbonds #25.2
    43839 
    43840 > name to_show
    43841 > #25.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43842 
    43843 > show to_show
    43844 
    43845 > ~cartoon #25.2
    43846 
    43847 > cartoon #25.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43848 
    43849 > transparency #25.2 60 target c
    43850 
    43851 > volume #23.2 color black transparency 0.8
    43852 
    43853 > volume zone #23.2 nearAtoms #25.2/a:2058-2064,2499-2506,2447,2450,2451 &
    43854 > sideonly range 2
    43855 
    43856 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J241_c2.png
    43857 > height 600 width 600 supersample 3
    43858 
    43859 > hide #!25.2 models
    43860 
    43861 > hide #!23.2 models
    43862 
    43863 > show #!25.3 models
    43864 
    43865 > show #!23.3 models
    43866 
    43867 > volume #23.3 level 0.1
    43868 
    43869 > hide #25.3
    43870 
    43871 > color #25.3/Y maroon
    43872 
    43873 > color #25.3/Z rebecca purple
    43874 
    43875 > color #25.3/a:2058-2064 cornflower blue
    43876 
    43877 > color #25.3/a:2447-2451 gold
    43878 
    43879 > color #25.3/a:2499-2506 green yellow
    43880 
    43881 > color #25.3/a:2499-2506 green yellow target c
    43882 
    43883 > ~show #25.3
    43884 
    43885 > ~hbonds #25.3
    43886 
    43887 > name to_show
    43888 > #25.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43889 
    43890 > show to_show
    43891 
    43892 > ~cartoon #25.3
    43893 
    43894 > cartoon #25.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43895 
    43896 > transparency
    43897 
    43898 Missing or invalid "percent" argument: Expected a number 
    43899 
    43900 > hide #!25.3 models
    43901 
    43902 > hide #!23.3 models
    43903 
    43904 > graphics quality 6
    43905 
    43906 > show #!1.2 models
    43907 
    43908 > hide #1.2
    43909 
    43910 > color #1.2/Y maroon
    43911 
    43912 > color #1.2/Z rebecca purple
    43913 
    43914 > color #1.2/a:2058-2064 cornflower blue
    43915 
    43916 > color #1.2/a:2447-2451 gold
    43917 
    43918 > color #1.2/a:2499-2506 green yellow
    43919 
    43920 > color #1.2/a:2499-2506 green yellow target c
    43921 
    43922 > ~show #1.2
    43923 
    43924 > ~hbonds #1.2
    43925 
    43926 > name to_show
    43927 > #1.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    43928 
    43929 > show to_show
    43930 
    43931 > ~cartoon #1.2
    43932 
    43933 > cartoon #1.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    43934 
    43935 > transparency #1.2 60 target c
    43936 
    43937 > volume # color black transparency 0.8
    43938 
    43939 Expected a density maps specifier or a keyword 
    43940 
    43941 > volume zone # nearAtoms #1.2/a:2058-2064,2499-2506,2447,2450,2451 & sideonly
    43942 > range 2
    43943 
    43944 Missing or invalid "volumes" argument: invalid density maps specifier 
    43945 
    43946 > bond #1.2/Y:76@N3':101@C
    43947 
    43948 Created 0 bonds 
    43949 
    43950 > bond #1.2/Z:76@N3':101@C
    43951 
    43952 Created 0 bonds 
    43953 
    43954 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    43955 
    43956 > style #1.2/Y:101 ball
    43957 
    43958 Changed 8 atom styles 
    43959 
    43960 > style #1.2/Z:101 ball
    43961 
    43962 Changed 8 atom styles 
    43963 
    43964 > size #1.2/Y:101:76@N3' ballScale 0.10 stickRadius 0.06
    43965 
    43966 Changed 8 bond radii, 1 ball scales 
    43967 
    43968 > size #1.2/Z:101:76@N3' ballScale 0.10 stickRadius 0.06
    43969 
    43970 Changed 8 bond radii, 1 ball scales 
    43971 
    43972 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_8emm.png height 600
    43973 > width 600 supersample 3
    43974 
    43975 > hide #!1.2 models
    43976 
    43977 > hide #!1.1 models
    43978 
    43979 > show #!1.7 models
    43980 
    43981 > hide #1.7
    43982 
    43983 > color #1.7/Y maroon
    43984 
    43985 > color #1.7/Z rebecca purple
    43986 
    43987 > color #1.7/a:2058-2064 cornflower blue
    43988 
    43989 > color #1.7/a:2447-2451 gold
    43990 
    43991 > color #1.7/a:2499-2506 green yellow
    43992 
    43993 > color #1.7/a:2499-2506 green yellow target c
    43994 
    43995 > ~show #1.7
    43996 
    43997 > ~hbonds #1.7
    43998 
    43999 > name to_show
    44000 > #1.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44001 
    44002 > show to_show
    44003 
    44004 > ~cartoon #1.7
    44005 
    44006 > cartoon #1.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44007 
    44008 > transparency #1.7 60 target c
    44009 
    44010 > volume # color black transparency 0.8
    44011 
    44012 Expected a density maps specifier or a keyword 
    44013 
    44014 > volume zone # nearAtoms #1.7/a:2058-2064,2499-2506,2447,2450,2451 & sideonly
    44015 > range 2
    44016 
    44017 Missing or invalid "volumes" argument: invalid density maps specifier 
    44018 
    44019 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_8cgk.png height 600
    44020 > width 600 supersample 3
    44021 
    44022 > hide #!1.7 models
    44023 
    44024 > hide #!1.6 models
    44025 
    44026 > show #!1.9 models
    44027 
    44028 > hide #1.9
    44029 
    44030 > color #1.9/Y maroon
    44031 
    44032 > color #1.9/Z rebecca purple
    44033 
    44034 > color #1.9/A:2058-2064 cornflower blue
    44035 
    44036 > color #1.9/A:2447-2451 gold
    44037 
    44038 > color #1.9/A:2499-2506 green yellow
    44039 
    44040 > color #1.9/A:2499-2506 green yellow target c
    44041 
    44042 > ~show #1.9
    44043 
    44044 > ~hbonds #1.9
    44045 
    44046 > name to_show
    44047 > #1.9/A:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44048 
    44049 > show to_show
    44050 
    44051 > ~cartoon #1.9
    44052 
    44053 > cartoon #1.9/A:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44054 
    44055 > transparency #1.9 60 target c
    44056 
    44057 > volume # color black transparency 0.8
    44058 
    44059 Expected a density maps specifier or a keyword 
    44060 
    44061 > volume zone # nearAtoms #1.9/A:2058-2064,2499-2506,2447,2450,2451 & sideonly
    44062 > range 2
    44063 
    44064 Missing or invalid "volumes" argument: invalid density maps specifier 
    44065 
    44066 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_7bv8.png height 600
    44067 > width 600 supersample 3
    44068 
    44069 > hide #!1.9 models
    44070 
    44071 > hide #!1.8 models
    44072 
    44073 > show #!1.11 models
    44074 
    44075 > hide #1.11
    44076 
    44077 > color #1.11/Y maroon
    44078 
    44079 > color #1.11/B8 rebecca purple
    44080 
    44081 > color #1.11/BA:2058-2064 cornflower blue
    44082 
    44083 > color #1.11/BA:2447-2451 gold
    44084 
    44085 > color #1.11/BA:2499-2506 green yellow
    44086 
    44087 > color #1.11/BA:2499-2506 green yellow target c
    44088 
    44089 > ~show #1.11
    44090 
    44091 > ~hbonds #1.11
    44092 
    44093 > name to_show
    44094 > #1.11/BA:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/B8:73-76,101
    44095 
    44096 > show to_show
    44097 
    44098 > ~cartoon #1.11
    44099 
    44100 > cartoon #1.11/BA:2058-2064,2499-2506,2447-2451/Y:73-76/B8:73-76
    44101 
    44102 > transparency #1.11 60 target c
    44103 
    44104 > volume # color black transparency 0.8
    44105 
    44106 Expected a density maps specifier or a keyword 
    44107 
    44108 > volume zone # nearAtoms #1.11/BA:2058-2064,2499-2506,2447,2450,2451 &
    44109 > sideonly range 2
    44110 
    44111 Missing or invalid "volumes" argument: invalid density maps specifier 
    44112 
    44113 > bond #1.11/B5:24@C/B8:76@O3'
    44114 
    44115 Created 0 bonds 
    44116 
    44117 > cartoon #1.11/B5
    44118 
    44119 > style #1.11/B5' ball
    44120 
    44121 Changed 0 atom styles 
    44122 
    44123 > size #1.11/B5/B8:76@O3' ballScale 0.10 stickRadius 0.06
    44124 
    44125 Changed 152 bond radii, 1 ball scales 
    44126 
    44127 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_7o1a.png height 600
    44128 > width 600 supersample 3
    44129 
    44130 > hide #!1.11 models
    44131 
    44132 > hide #!1.10 models
    44133 
    44134 > show #!1.14 models
    44135 
    44136 > hide #1.14
    44137 
    44138 > color #1.14/Y maroon
    44139 
    44140 > color #1.14/Z rebecca purple
    44141 
    44142 > color #1.14/a:2058-2064 cornflower blue
    44143 
    44144 > color #1.14/a:2447-2451 gold
    44145 
    44146 > color #1.14/a:2499-2506 green yellow
    44147 
    44148 > color #1.14/a:2499-2506 green yellow target c
    44149 
    44150 > ~show #1.14
    44151 
    44152 > ~hbonds #1.14
    44153 
    44154 > name to_show
    44155 > #1.14/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44156 
    44157 > show to_show
    44158 
    44159 > ~cartoon #1.14
    44160 
    44161 > cartoon #1.14/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44162 
    44163 > transparency #1.14 60 target c
    44164 
    44165 > volume # color black transparency 0.8
    44166 
    44167 Expected a density maps specifier or a keyword 
    44168 
    44169 > volume zone # nearAtoms #1.14/a:2058-2064,2499-2506,2447,2450,2451 &
    44170 > sideonly range 2
    44171 
    44172 Missing or invalid "volumes" argument: invalid density maps specifier 
    44173 
    44174 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_8cam.png height 600
    44175 > width 600 supersample 3
    44176 
    44177 > hide #!1.14 models
    44178 
    44179 > hide #!1.13 models
    44180 
    44181 > show #!6.10 models
    44182 
    44183 > hide #6.10
    44184 
    44185 > color #6.10/Y maroon
    44186 
    44187 > color #6.10/Z rebecca purple
    44188 
    44189 > color #6.10/a:2058-2064 cornflower blue
    44190 
    44191 > color #6.10/a:2447-2451 gold
    44192 
    44193 > color #6.10/a:2499-2506 green yellow
    44194 
    44195 > color #6.10/a:2499-2506 green yellow target c
    44196 
    44197 > ~show #6.10
    44198 
    44199 > ~hbonds #6.10
    44200 
    44201 > name to_show
    44202 > #6.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44203 
    44204 > show to_show
    44205 
    44206 > ~cartoon #6.10
    44207 
    44208 > cartoon #6.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44209 
    44210 > transparency #6.10 60 target c
    44211 
    44212 > volume # color black transparency 0.8
    44213 
    44214 Expected a density maps specifier or a keyword 
    44215 
    44216 > volume zone # nearAtoms #6.10/a:2058-2064,2499-2506,2447,2450,2451 &
    44217 > sideonly range 2
    44218 
    44219 Missing or invalid "volumes" argument: invalid density maps specifier 
    44220 
    44221 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d9_J83_cl0.png height
    44222 > 600 width 600 supersample 3
    44223 
    44224 > hide #!6.10 models
    44225 
    44226 > hide #!4.10 models
    44227 
    44228 > show #!6.1 models
    44229 
    44230 > hide #6.1
    44231 
    44232 > color #6.1/Y maroon
    44233 
    44234 > color #6.1/Z rebecca purple
    44235 
    44236 > color #6.1/a:2058-2064 cornflower blue
    44237 
    44238 > color #6.1/a:2447-2451 gold
    44239 
    44240 > color #6.1/a:2499-2506 green yellow
    44241 
    44242 > color #6.1/a:2499-2506 green yellow target c
    44243 
    44244 > ~show #6.1
    44245 
    44246 > ~hbonds #6.1
    44247 
    44248 > name to_show
    44249 > #6.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44250 
    44251 > show to_show
    44252 
    44253 > ~cartoon #6.1
    44254 
    44255 > cartoon #6.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44256 
    44257 > transparency #6.1 60 target c
    44258 
    44259 > volume # color black transparency 0.8
    44260 
    44261 Expected a density maps specifier or a keyword 
    44262 
    44263 > volume zone # nearAtoms #6.1/a:2058-2064,2499-2506,2447,2450,2451 & sideonly
    44264 > range 2
    44265 
    44266 Missing or invalid "volumes" argument: invalid density maps specifier 
    44267 
    44268 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d9_J84_cl1.png height
    44269 > 600 width 600 supersample 3
    44270 
    44271 > hide #!6.1 models
    44272 
    44273 > hide #!4.1 models
    44274 
    44275 > show #!6.2 models
    44276 
    44277 > hide #6.2
    44278 
    44279 > color #6.2/Y maroon
    44280 
    44281 > color #6.2/Z rebecca purple
    44282 
    44283 > color #6.2/a:2058-2064 cornflower blue
    44284 
    44285 > color #6.2/a:2447-2451 gold
    44286 
    44287 > color #6.2/a:2499-2506 green yellow
    44288 
    44289 > color #6.2/a:2499-2506 green yellow target c
    44290 
    44291 > ~show #6.2
    44292 
    44293 > ~hbonds #6.2
    44294 
    44295 > name to_show
    44296 > #6.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44297 
    44298 > show to_show
    44299 
    44300 > ~cartoon #6.2
    44301 
    44302 > cartoon #6.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44303 
    44304 > transparency #6.2 60 target c
    44305 
    44306 > volume # color black transparency 0.8
    44307 
    44308 Expected a density maps specifier or a keyword 
    44309 
    44310 > volume zone # nearAtoms #6.2/a:2058-2064,2499-2506,2447,2450,2451 & sideonly
    44311 > range 2
    44312 
    44313 Missing or invalid "volumes" argument: invalid density maps specifier 
    44314 
    44315 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d9_J85_cl2.png height
    44316 > 600 width 600 supersample 3
    44317 
    44318 > hide #!6.2 models
    44319 
    44320 > hide #!4.2 models
    44321 
    44322 > show #!6.3 models
    44323 
    44324 > hide #6.3
    44325 
    44326 > color #6.3/Y maroon
    44327 
    44328 > color #6.3/Z rebecca purple
    44329 
    44330 > color #6.3/a:2058-2064 cornflower blue
    44331 
    44332 > color #6.3/a:2447-2451 gold
    44333 
    44334 > color #6.3/a:2499-2506 green yellow
    44335 
    44336 > color #6.3/a:2499-2506 green yellow target c
    44337 
    44338 > ~show #6.3
    44339 
    44340 > ~hbonds #6.3
    44341 
    44342 > name to_show
    44343 > #6.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44344 
    44345 > show to_show
    44346 
    44347 > ~cartoon #6.3
    44348 
    44349 > cartoon #6.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44350 
    44351 > transparency #6.3 60 target c
    44352 
    44353 > volume # color black transparency 0.8
    44354 
    44355 Expected a density maps specifier or a keyword 
    44356 
    44357 > volume zone # nearAtoms #6.3/a:2058-2064,2499-2506,2447,2450,2451 & sideonly
    44358 > range 2
    44359 
    44360 Missing or invalid "volumes" argument: invalid density maps specifier 
    44361 
    44362 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d9_J86_cl3.png height
    44363 > 600 width 600 supersample 3
    44364 
    44365 > hide #!6.3 models
    44366 
    44367 > hide #!4.3 models
    44368 
    44369 > show #!6.4 models
    44370 
    44371 > hide #6.4
    44372 
    44373 > color #6.4/Y maroon
    44374 
    44375 > color #6.4/Z rebecca purple
    44376 
    44377 > color #6.4/a:2058-2064 cornflower blue
    44378 
    44379 > color #6.4/a:2447-2451 gold
    44380 
    44381 > color #6.4/a:2499-2506 green yellow
    44382 
    44383 > color #6.4/a:2499-2506 green yellow target c
    44384 
    44385 > ~show #6.4
    44386 
    44387 > ~hbonds #6.4
    44388 
    44389 > name to_show
    44390 > #6.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44391 
    44392 > show to_show
    44393 
    44394 > ~cartoon #6.4
    44395 
    44396 > cartoon #6.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44397 
    44398 > transparency #6.4 60 target c
    44399 
    44400 > volume # color black transparency 0.8
    44401 
    44402 Expected a density maps specifier or a keyword 
    44403 
    44404 > volume zone # nearAtoms #6.4/a:2058-2064,2499-2506,2447,2450,2451 & sideonly
    44405 > range 2
    44406 
    44407 Missing or invalid "volumes" argument: invalid density maps specifier 
    44408 
    44409 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d9_J87_cl4.png height
    44410 > 600 width 600 supersample 3
    44411 
    44412 > hide #!6.4 models
    44413 
    44414 > hide #!4.4 models
    44415 
    44416 > show #!6.5 models
    44417 
    44418 > hide #6.5
    44419 
    44420 > color #6.5/Y maroon
    44421 
    44422 > color #6.5/Z rebecca purple
    44423 
    44424 > color #6.5/a:2058-2064 cornflower blue
    44425 
    44426 > color #6.5/a:2447-2451 gold
    44427 
    44428 > color #6.5/a:2499-2506 green yellow
    44429 
    44430 > color #6.5/a:2499-2506 green yellow target c
    44431 
    44432 > ~show #6.5
    44433 
    44434 > ~hbonds #6.5
    44435 
    44436 > name to_show
    44437 > #6.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44438 
    44439 > show to_show
    44440 
    44441 > ~cartoon #6.5
    44442 
    44443 > cartoon #6.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44444 
    44445 > transparency #6.5 60 target c
    44446 
    44447 > volume # color black transparency 0.8
    44448 
    44449 Expected a density maps specifier or a keyword 
    44450 
    44451 > volume zone # nearAtoms #6.5/a:2058-2064,2499-2506,2447,2450,2451 & sideonly
    44452 > range 2
    44453 
    44454 Missing or invalid "volumes" argument: invalid density maps specifier 
    44455 
    44456 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d9_J88_cl5.png height
    44457 > 600 width 600 supersample 3
    44458 
    44459 > hide #!6.5 models
    44460 
    44461 > hide #!4.5 models
    44462 
    44463 > show #!6.6 models
    44464 
    44465 > hide #6.6
    44466 
    44467 > color #6.6/Y maroon
    44468 
    44469 > color #6.6/Z rebecca purple
    44470 
    44471 > color #6.6/a:2058-2064 cornflower blue
    44472 
    44473 > color #6.6/a:2447-2451 gold
    44474 
    44475 > color #6.6/a:2499-2506 green yellow
    44476 
    44477 > color #6.6/a:2499-2506 green yellow target c
    44478 
    44479 > ~show #6.6
    44480 
    44481 > ~hbonds #6.6
    44482 
    44483 > name to_show
    44484 > #6.6/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44485 
    44486 > show to_show
    44487 
    44488 > ~cartoon #6.6
    44489 
    44490 > cartoon #6.6/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44491 
    44492 > transparency #6.6 60 target c
    44493 
    44494 > volume # color black transparency 0.8
    44495 
    44496 Expected a density maps specifier or a keyword 
    44497 
    44498 > volume zone # nearAtoms #6.6/a:2058-2064,2499-2506,2447,2450,2451 & sideonly
    44499 > range 2
    44500 
    44501 Missing or invalid "volumes" argument: invalid density maps specifier 
    44502 
    44503 > ~show #6.6/a:2059-2060
    44504 
    44505 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d9_J89_cl6.png height
    44506 > 600 width 600 supersample 3
    44507 
    44508 > hide #!6.6 models
    44509 
    44510 > hide #!4.6 models
    44511 
    44512 > show #!6.7 models
    44513 
    44514 > hide #6.7
    44515 
    44516 > color #6.7/Y maroon
    44517 
    44518 > color #6.7/Z rebecca purple
    44519 
    44520 > color #6.7/a:2058-2064 cornflower blue
    44521 
    44522 > color #6.7/a:2447-2451 gold
    44523 
    44524 > color #6.7/a:2499-2506 green yellow
    44525 
    44526 > color #6.7/a:2499-2506 green yellow target c
    44527 
    44528 > ~show #6.7
    44529 
    44530 > ~hbonds #6.7
    44531 
    44532 > name to_show
    44533 > #6.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44534 
    44535 > show to_show
    44536 
    44537 > ~cartoon #6.7
    44538 
    44539 > cartoon #6.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44540 
    44541 > transparency #6.7 60 target c
    44542 
    44543 > volume # color black transparency 0.8
    44544 
    44545 Expected a density maps specifier or a keyword 
    44546 
    44547 > volume zone # nearAtoms #6.7/a:2058-2064,2499-2506,2447,2450,2451 & sideonly
    44548 > range 2
    44549 
    44550 Missing or invalid "volumes" argument: invalid density maps specifier 
    44551 
    44552 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d9_J90_cl7.png height
    44553 > 600 width 600 supersample 3
    44554 
    44555 > hide #!6.7 models
    44556 
    44557 > hide #!4.7 models
    44558 
    44559 > show #!6.8 models
    44560 
    44561 > hide #6.8
    44562 
    44563 > color #6.8/Y maroon
    44564 
    44565 > color #6.8/Z rebecca purple
    44566 
    44567 > color #6.8/a:2058-2064 cornflower blue
    44568 
    44569 > color #6.8/a:2447-2451 gold
    44570 
    44571 > color #6.8/a:2499-2506 green yellow
    44572 
    44573 > color #6.8/a:2499-2506 green yellow target c
    44574 
    44575 > ~show #6.8
    44576 
    44577 > ~hbonds #6.8
    44578 
    44579 > name to_show
    44580 > #6.8/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44581 
    44582 > show to_show
    44583 
    44584 > ~cartoon #6.8
    44585 
    44586 > cartoon #6.8/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44587 
    44588 > transparency #6.8 60 target c
    44589 
    44590 > volume # color black transparency 0.8
    44591 
    44592 Expected a density maps specifier or a keyword 
    44593 
    44594 > volume zone # nearAtoms #6.8/a:2058-2064,2499-2506,2447,2450,2451 & sideonly
    44595 > range 2
    44596 
    44597 Missing or invalid "volumes" argument: invalid density maps specifier 
    44598 
    44599 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d9_J91_cl8.png height
    44600 > 600 width 600 supersample 3
    44601 
    44602 > hide #!6.8 models
    44603 
    44604 > hide #!4.8 models
    44605 
    44606 > show #!6.9 models
    44607 
    44608 > hide #6.9
    44609 
    44610 > color #6.9/Y maroon
    44611 
    44612 > color #6.9/Z rebecca purple
    44613 
    44614 > color #6.9/a:2058-2064 cornflower blue
    44615 
    44616 > color #6.9/a:2447-2451 gold
    44617 
    44618 > color #6.9/a:2499-2506 green yellow
    44619 
    44620 > color #6.9/a:2499-2506 green yellow target c
    44621 
    44622 > ~show #6.9
    44623 
    44624 > ~hbonds #6.9
    44625 
    44626 > name to_show
    44627 > #6.9/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44628 
    44629 > show to_show
    44630 
    44631 > ~cartoon #6.9
    44632 
    44633 > cartoon #6.9/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44634 
    44635 > transparency #6.9 60 target c
    44636 
    44637 > volume # color black transparency 0.8
    44638 
    44639 Expected a density maps specifier or a keyword 
    44640 
    44641 > volume zone # nearAtoms #6.9/a:2058-2064,2499-2506,2447,2450,2451 & sideonly
    44642 > range 2
    44643 
    44644 Missing or invalid "volumes" argument: invalid density maps specifier 
    44645 
    44646 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d9_J92_cl9.png height
    44647 > 600 width 600 supersample 3
    44648 
    44649 > hide #!6.9 models
    44650 
    44651 > hide #!4.9 models
    44652 
    44653 > show #!14.10 models
    44654 
    44655 > hide #14.10
    44656 
    44657 > color #14.10/Y maroon
    44658 
    44659 > color #14.10/Z rebecca purple
    44660 
    44661 > color #14.10/a:2058-2064 cornflower blue
    44662 
    44663 > color #14.10/a:2447-2451 gold
    44664 
    44665 > color #14.10/a:2499-2506 green yellow
    44666 
    44667 > color #14.10/a:2499-2506 green yellow target c
    44668 
    44669 > ~show #14.10
    44670 
    44671 > ~hbonds #14.10
    44672 
    44673 > name to_show
    44674 > #14.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44675 
    44676 > show to_show
    44677 
    44678 > ~cartoon #14.10
    44679 
    44680 > cartoon #14.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44681 
    44682 > transparency #14.10 60 target c
    44683 
    44684 > volume # color black transparency 0.8
    44685 
    44686 Expected a density maps specifier or a keyword 
    44687 
    44688 > volume zone # nearAtoms #14.10/a:2058-2064,2499-2506,2447,2450,2451 &
    44689 > sideonly range 2
    44690 
    44691 Missing or invalid "volumes" argument: invalid density maps specifier 
    44692 
    44693 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d10_J53_c0.png height
    44694 > 600 width 600 supersample 3
    44695 
    44696 > hide #!14.10 models
    44697 
    44698 > hide #!12.10 models
    44699 
    44700 > show #!14.1 models
    44701 
    44702 > hide #14.1
    44703 
    44704 > color #14.1/Y maroon
    44705 
    44706 > color #14.1/Z rebecca purple
    44707 
    44708 > color #14.1/a:2058-2064 cornflower blue
    44709 
    44710 > color #14.1/a:2447-2451 gold
    44711 
    44712 > color #14.1/a:2499-2506 green yellow
    44713 
    44714 > color #14.1/a:2499-2506 green yellow target c
    44715 
    44716 > ~show #14.1
    44717 
    44718 > ~hbonds #14.1
    44719 
    44720 > name to_show
    44721 > #14.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44722 
    44723 > show to_show
    44724 
    44725 > ~cartoon #14.1
    44726 
    44727 > cartoon #14.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44728 
    44729 > transparency #14.1 60 target c
    44730 
    44731 > volume # color black transparency 0.8
    44732 
    44733 Expected a density maps specifier or a keyword 
    44734 
    44735 > volume zone # nearAtoms #14.1/a:2058-2064,2499-2506,2447,2450,2451 &
    44736 > sideonly range 2
    44737 
    44738 Missing or invalid "volumes" argument: invalid density maps specifier 
    44739 
    44740 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d10_J54_c1.png height
    44741 > 600 width 600 supersample 3
    44742 
    44743 > hide #!14.1 models
    44744 
    44745 > hide #!12.1 models
    44746 
    44747 > show #!14.2 models
    44748 
    44749 > hide #14.2
    44750 
    44751 > color #14.2/Y maroon
    44752 
    44753 > color #14.2/Z rebecca purple
    44754 
    44755 > color #14.2/a:2058-2064 cornflower blue
    44756 
    44757 > color #14.2/a:2447-2451 gold
    44758 
    44759 > color #14.2/a:2499-2506 green yellow
    44760 
    44761 > color #14.2/a:2499-2506 green yellow target c
    44762 
    44763 > ~show #14.2
    44764 
    44765 > ~hbonds #14.2
    44766 
    44767 > name to_show
    44768 > #14.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44769 
    44770 > show to_show
    44771 
    44772 > ~cartoon #14.2
    44773 
    44774 > cartoon #14.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44775 
    44776 > transparency #14.2 60 target c
    44777 
    44778 > volume # color black transparency 0.8
    44779 
    44780 Expected a density maps specifier or a keyword 
    44781 
    44782 > volume zone # nearAtoms #14.2/a:2058-2064,2499-2506,2447,2450,2451 &
    44783 > sideonly range 2
    44784 
    44785 Missing or invalid "volumes" argument: invalid density maps specifier 
    44786 
    44787 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d10_J55_c2.png height
    44788 > 600 width 600 supersample 3
    44789 
    44790 > hide #!14.2 models
    44791 
    44792 > hide #!12.2 models
    44793 
    44794 > show #!14.3 models
    44795 
    44796 > hide #14.3
    44797 
    44798 > color #14.3/Y maroon
    44799 
    44800 > color #14.3/Z rebecca purple
    44801 
    44802 > color #14.3/a:2058-2064 cornflower blue
    44803 
    44804 > color #14.3/a:2447-2451 gold
    44805 
    44806 > color #14.3/a:2499-2506 green yellow
    44807 
    44808 > color #14.3/a:2499-2506 green yellow target c
    44809 
    44810 > ~show #14.3
    44811 
    44812 > ~hbonds #14.3
    44813 
    44814 > name to_show
    44815 > #14.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44816 
    44817 > show to_show
    44818 
    44819 > ~cartoon #14.3
    44820 
    44821 > cartoon #14.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44822 
    44823 > transparency #14.3 60 target c
    44824 
    44825 > volume # color black transparency 0.8
    44826 
    44827 Expected a density maps specifier or a keyword 
    44828 
    44829 > volume zone # nearAtoms #14.3/a:2058-2064,2499-2506,2447,2450,2451 &
    44830 > sideonly range 2
    44831 
    44832 Missing or invalid "volumes" argument: invalid density maps specifier 
    44833 
    44834 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d10_J56_c3.png height
    44835 > 600 width 600 supersample 3
    44836 
    44837 > hide #!14.3 models
    44838 
    44839 > hide #!12.3 models
    44840 
    44841 > show #!14.4 models
    44842 
    44843 > hide #14.4
    44844 
    44845 > color #14.4/Y maroon
    44846 
    44847 > color #14.4/Z rebecca purple
    44848 
    44849 > color #14.4/a:2058-2064 cornflower blue
    44850 
    44851 > color #14.4/a:2447-2451 gold
    44852 
    44853 > color #14.4/a:2499-2506 green yellow
    44854 
    44855 > color #14.4/a:2499-2506 green yellow target c
    44856 
    44857 > ~show #14.4
    44858 
    44859 > ~hbonds #14.4
    44860 
    44861 > name to_show
    44862 > #14.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44863 
    44864 > show to_show
    44865 
    44866 > ~cartoon #14.4
    44867 
    44868 > cartoon #14.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44869 
    44870 > transparency #14.4 60 target c
    44871 
    44872 > volume # color black transparency 0.8
    44873 
    44874 Expected a density maps specifier or a keyword 
    44875 
    44876 > volume zone # nearAtoms #14.4/a:2058-2064,2499-2506,2447,2450,2451 &
    44877 > sideonly range 2
    44878 
    44879 Missing or invalid "volumes" argument: invalid density maps specifier 
    44880 
    44881 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d10_J57_c4.png height
    44882 > 600 width 600 supersample 3
    44883 
    44884 > hide #!14.4 models
    44885 
    44886 > hide #!12.4 models
    44887 
    44888 > show #!14.5 models
    44889 
    44890 > hide #14.5
    44891 
    44892 > color #14.5/Y maroon
    44893 
    44894 > color #14.5/Z rebecca purple
    44895 
    44896 > color #14.5/a:2058-2064 cornflower blue
    44897 
    44898 > color #14.5/a:2447-2451 gold
    44899 
    44900 > color #14.5/a:2499-2506 green yellow
    44901 
    44902 > color #14.5/a:2499-2506 green yellow target c
    44903 
    44904 > ~show #14.5
    44905 
    44906 > ~hbonds #14.5
    44907 
    44908 > name to_show
    44909 > #14.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44910 
    44911 > show to_show
    44912 
    44913 > ~cartoon #14.5
    44914 
    44915 > cartoon #14.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44916 
    44917 > transparency #14.5 60 target c
    44918 
    44919 > volume # color black transparency 0.8
    44920 
    44921 Expected a density maps specifier or a keyword 
    44922 
    44923 > volume zone # nearAtoms #14.5/a:2058-2064,2499-2506,2447,2450,2451 &
    44924 > sideonly range 2
    44925 
    44926 Missing or invalid "volumes" argument: invalid density maps specifier 
    44927 
    44928 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d10_J58_c5.png height
    44929 > 600 width 600 supersample 3
    44930 
    44931 > hide #!14.5 models
    44932 
    44933 > hide #!12.5 models
    44934 
    44935 > show #!14.6 models
    44936 
    44937 > hide #14.6
    44938 
    44939 > color #14.6/Y maroon
    44940 
    44941 > color #14.6/Z rebecca purple
    44942 
    44943 > color #14.6/a:2058-2064 cornflower blue
    44944 
    44945 > color #14.6/a:2447-2451 gold
    44946 
    44947 > color #14.6/a:2499-2506 green yellow
    44948 
    44949 > color #14.6/a:2499-2506 green yellow target c
    44950 
    44951 > ~show #14.6
    44952 
    44953 > ~hbonds #14.6
    44954 
    44955 > name to_show
    44956 > #14.6/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    44957 
    44958 > show to_show
    44959 
    44960 > ~cartoon #14.6
    44961 
    44962 > cartoon #14.6/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    44963 
    44964 > transparency #14.6 60 target c
    44965 
    44966 > volume # color black transparency 0.8
    44967 
    44968 Expected a density maps specifier or a keyword 
    44969 
    44970 > volume zone # nearAtoms #14.6/a:2058-2064,2499-2506,2447,2450,2451 &
    44971 > sideonly range 2
    44972 
    44973 Missing or invalid "volumes" argument: invalid density maps specifier 
    44974 
    44975 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d10_J59_c6.png height
    44976 > 600 width 600 supersample 3
    44977 
    44978 > hide #!14.6 models
    44979 
    44980 > hide #!12.6 models
    44981 
    44982 > show #!14.7 models
    44983 
    44984 > hide #14.7
    44985 
    44986 > color #14.7/Y maroon
    44987 
    44988 > color #14.7/Z rebecca purple
    44989 
    44990 > color #14.7/a:2058-2064 cornflower blue
    44991 
    44992 > color #14.7/a:2447-2451 gold
    44993 
    44994 > color #14.7/a:2499-2506 green yellow
    44995 
    44996 > color #14.7/a:2499-2506 green yellow target c
    44997 
    44998 > ~show #14.7
    44999 
    45000 > ~hbonds #14.7
    45001 
    45002 > name to_show
    45003 > #14.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45004 
    45005 > show to_show
    45006 
    45007 > ~cartoon #14.7
    45008 
    45009 > cartoon #14.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45010 
    45011 > transparency #14.7 60 target c
    45012 
    45013 > volume # color black transparency 0.8
    45014 
    45015 Expected a density maps specifier or a keyword 
    45016 
    45017 > volume zone # nearAtoms #14.7/a:2058-2064,2499-2506,2447,2450,2451 &
    45018 > sideonly range 2
    45019 
    45020 Missing or invalid "volumes" argument: invalid density maps specifier 
    45021 
    45022 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d10_J60_c7.png height
    45023 > 600 width 600 supersample 3
    45024 
    45025 > hide #!14.7 models
    45026 
    45027 > hide #!12.7 models
    45028 
    45029 > show #!14.8 models
    45030 
    45031 > hide #14.8
    45032 
    45033 > color #14.8/Y maroon
    45034 
    45035 > color #14.8/Z rebecca purple
    45036 
    45037 > color #14.8/a:2058-2064 cornflower blue
    45038 
    45039 > color #14.8/a:2447-2451 gold
    45040 
    45041 > color #14.8/a:2499-2506 green yellow
    45042 
    45043 > color #14.8/a:2499-2506 green yellow target c
    45044 
    45045 > ~show #14.8
    45046 
    45047 > ~hbonds #14.8
    45048 
    45049 > name to_show
    45050 > #14.8/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45051 
    45052 > show to_show
    45053 
    45054 > ~cartoon #14.8
    45055 
    45056 > cartoon #14.8/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45057 
    45058 > transparency #14.8 60 target c
    45059 
    45060 > volume # color black transparency 0.8
    45061 
    45062 Expected a density maps specifier or a keyword 
    45063 
    45064 > volume zone # nearAtoms #14.8/a:2058-2064,2499-2506,2447,2450,2451 &
    45065 > sideonly range 2
    45066 
    45067 Missing or invalid "volumes" argument: invalid density maps specifier 
    45068 
    45069 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d10_J61_c8.png height
    45070 > 600 width 600 supersample 3
    45071 
    45072 > hide #!14.8 models
    45073 
    45074 > hide #!12.8 models
    45075 
    45076 > show #!14.9 models
    45077 
    45078 > hide #14.9
    45079 
    45080 > color #14.9/Y maroon
    45081 
    45082 > color #14.9/Z rebecca purple
    45083 
    45084 > color #14.9/a:2058-2064 cornflower blue
    45085 
    45086 > color #14.9/a:2447-2451 gold
    45087 
    45088 > color #14.9/a:2499-2506 green yellow
    45089 
    45090 > color #14.9/a:2499-2506 green yellow target c
    45091 
    45092 > ~show #14.9
    45093 
    45094 > ~hbonds #14.9
    45095 
    45096 > name to_show
    45097 > #14.9/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45098 
    45099 > show to_show
    45100 
    45101 > ~cartoon #14.9
    45102 
    45103 > cartoon #14.9/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45104 
    45105 > transparency #14.9 60 target c
    45106 
    45107 > volume # color black transparency 0.8
    45108 
    45109 Expected a density maps specifier or a keyword 
    45110 
    45111 > volume zone # nearAtoms #14.9/a:2058-2064,2499-2506,2447,2450,2451 &
    45112 > sideonly range 2
    45113 
    45114 Missing or invalid "volumes" argument: invalid density maps specifier 
    45115 
    45116 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_d10_J62_c9.png height
    45117 > 600 width 600 supersample 3
    45118 
    45119 > hide #!14.9 models
    45120 
    45121 > hide #!12.9 models
    45122 
    45123 > show #!22.1 models
    45124 
    45125 > hide #22.1
    45126 
    45127 > color #22.1/Y maroon
    45128 
    45129 > color #22.1/Z rebecca purple
    45130 
    45131 > color #22.1/a:2058-2064 cornflower blue
    45132 
    45133 > color #22.1/a:2447-2451 gold
    45134 
    45135 > color #22.1/a:2499-2506 green yellow
    45136 
    45137 > color #22.1/a:2499-2506 green yellow target c
    45138 
    45139 > ~show #22.1
    45140 
    45141 > ~hbonds #22.1
    45142 
    45143 > name to_show
    45144 > #22.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45145 
    45146 > show to_show
    45147 
    45148 > ~cartoon #22.1
    45149 
    45150 > cartoon #22.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45151 
    45152 > transparency #22.1 60 target c
    45153 
    45154 > volume # color black transparency 0.8
    45155 
    45156 Expected a density maps specifier or a keyword 
    45157 
    45158 > volume zone # nearAtoms #22.1/a:2058-2064,2499-2506,2447,2450,2451 &
    45159 > sideonly range 2
    45160 
    45161 Missing or invalid "volumes" argument: invalid density maps specifier 
    45162 
    45163 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J111_ape.png height
    45164 > 600 width 600 supersample 3
    45165 
    45166 > hide #!22.1 models
    45167 
    45168 > hide #!21.1 models
    45169 
    45170 > show #!22.2 models
    45171 
    45172 > hide #22.2
    45173 
    45174 > color #22.2/Y maroon
    45175 
    45176 > color #22.2/Z rebecca purple
    45177 
    45178 > color #22.2/a:2058-2064 cornflower blue
    45179 
    45180 > color #22.2/a:2447-2451 gold
    45181 
    45182 > color #22.2/a:2499-2506 green yellow
    45183 
    45184 > color #22.2/a:2499-2506 green yellow target c
    45185 
    45186 > ~show #22.2
    45187 
    45188 > ~hbonds #22.2
    45189 
    45190 > name to_show
    45191 > #22.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45192 
    45193 > show to_show
    45194 
    45195 > ~cartoon #22.2
    45196 
    45197 > cartoon #22.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45198 
    45199 > transparency #22.2 60 target c
    45200 
    45201 > volume # color black transparency 0.8
    45202 
    45203 Expected a density maps specifier or a keyword 
    45204 
    45205 > volume zone # nearAtoms #22.2/a:2058-2064,2499-2506,2447,2450,2451 &
    45206 > sideonly range 2
    45207 
    45208 Missing or invalid "volumes" argument: invalid density maps specifier 
    45209 
    45210 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J112_ap.png height
    45211 > 600 width 600 supersample 3
    45212 
    45213 > hide #!22.2 models
    45214 
    45215 > hide #!21.2 models
    45216 
    45217 > show #!22.3 models
    45218 
    45219 > hide #22.3
    45220 
    45221 > color #22.3/Y maroon
    45222 
    45223 > color #22.3/Z rebecca purple
    45224 
    45225 > color #22.3/a:2058-2064 cornflower blue
    45226 
    45227 > color #22.3/a:2447-2451 gold
    45228 
    45229 > color #22.3/a:2499-2506 green yellow
    45230 
    45231 > color #22.3/a:2499-2506 green yellow target c
    45232 
    45233 > ~show #22.3
    45234 
    45235 > ~hbonds #22.3
    45236 
    45237 > name to_show
    45238 > #22.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45239 
    45240 > show to_show
    45241 
    45242 > ~cartoon #22.3
    45243 
    45244 > cartoon #22.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45245 
    45246 > transparency #22.3 60 target c
    45247 
    45248 > volume # color black transparency 0.8
    45249 
    45250 Expected a density maps specifier or a keyword 
    45251 
    45252 > volume zone # nearAtoms #22.3/a:2058-2064,2499-2506,2447,2450,2451 &
    45253 > sideonly range 2
    45254 
    45255 Missing or invalid "volumes" argument: invalid density maps specifier 
    45256 
    45257 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J113_pe.png height
    45258 > 600 width 600 supersample 3
    45259 
    45260 > hide #!22.3 models
    45261 
    45262 > hide #!21.3 models
    45263 
    45264 > show #!22.4 models
    45265 
    45266 > hide #22.4
    45267 
    45268 > color #22.4/Y maroon
    45269 
    45270 > color #22.4/Z rebecca purple
    45271 
    45272 > color #22.4/a:2058-2064 cornflower blue
    45273 
    45274 > color #22.4/a:2447-2451 gold
    45275 
    45276 > color #22.4/a:2499-2506 green yellow
    45277 
    45278 > color #22.4/a:2499-2506 green yellow target c
    45279 
    45280 > ~show #22.4
    45281 
    45282 > ~hbonds #22.4
    45283 
    45284 > name to_show
    45285 > #22.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45286 
    45287 > show to_show
    45288 
    45289 > ~cartoon #22.4
    45290 
    45291 > cartoon #22.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45292 
    45293 > transparency #22.4 60 target c
    45294 
    45295 > volume # color black transparency 0.8
    45296 
    45297 Expected a density maps specifier or a keyword 
    45298 
    45299 > volume zone # nearAtoms #22.4/a:2058-2064,2499-2506,2447,2450,2451 &
    45300 > sideonly range 2
    45301 
    45302 Missing or invalid "volumes" argument: invalid density maps specifier 
    45303 
    45304 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J124_e.png height
    45305 > 600 width 600 supersample 3
    45306 
    45307 > hide #!22.4 models
    45308 
    45309 > hide #!21.4 models
    45310 
    45311 > show #!25.10 models
    45312 
    45313 > hide #25.10
    45314 
    45315 > color #25.10/Y maroon
    45316 
    45317 > color #25.10/Z rebecca purple
    45318 
    45319 > color #25.10/a:2058-2064 cornflower blue
    45320 
    45321 > color #25.10/a:2447-2451 gold
    45322 
    45323 > color #25.10/a:2499-2506 green yellow
    45324 
    45325 > color #25.10/a:2499-2506 green yellow target c
    45326 
    45327 > ~show #25.10
    45328 
    45329 > ~hbonds #25.10
    45330 
    45331 > name to_show
    45332 > #25.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45333 
    45334 > show to_show
    45335 
    45336 > ~cartoon #25.10
    45337 
    45338 > cartoon #25.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45339 
    45340 > transparency #25.10 60 target c
    45341 
    45342 > volume # color black transparency 0.8
    45343 
    45344 Expected a density maps specifier or a keyword 
    45345 
    45346 > volume zone # nearAtoms #25.10/a:2058-2064,2499-2506,2447,2450,2451 &
    45347 > sideonly range 2
    45348 
    45349 Missing or invalid "volumes" argument: invalid density maps specifier 
    45350 
    45351 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J239_c0.png height
    45352 > 600 width 600 supersample 3
    45353 
    45354 > hide #!25.10 models
    45355 
    45356 > hide #!23.10 models
    45357 
    45358 > show #!25.1 models
    45359 
    45360 > hide #25.1
    45361 
    45362 > color #25.1/Y maroon
    45363 
    45364 > color #25.1/Z rebecca purple
    45365 
    45366 > color #25.1/a:2058-2064 cornflower blue
    45367 
    45368 > color #25.1/a:2447-2451 gold
    45369 
    45370 > color #25.1/a:2499-2506 green yellow
    45371 
    45372 > color #25.1/a:2499-2506 green yellow target c
    45373 
    45374 > ~show #25.1
    45375 
    45376 > ~hbonds #25.1
    45377 
    45378 > name to_show
    45379 > #25.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45380 
    45381 > show to_show
    45382 
    45383 > ~cartoon #25.1
    45384 
    45385 > cartoon #25.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45386 
    45387 > transparency #25.1 60 target c
    45388 
    45389 > volume # color black transparency 0.8
    45390 
    45391 Expected a density maps specifier or a keyword 
    45392 
    45393 > volume zone # nearAtoms #25.1/a:2058-2064,2499-2506,2447,2450,2451 &
    45394 > sideonly range 2
    45395 
    45396 Missing or invalid "volumes" argument: invalid density maps specifier 
    45397 
    45398 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J240_c1.png height
    45399 > 600 width 600 supersample 3
    45400 
    45401 > hide #!25.1 models
    45402 
    45403 > hide #!23.1 models
    45404 
    45405 > show #!25.2 models
    45406 
    45407 > hide #25.2
    45408 
    45409 > color #25.2/Y maroon
    45410 
    45411 > color #25.2/Z rebecca purple
    45412 
    45413 > color #25.2/a:2058-2064 cornflower blue
    45414 
    45415 > color #25.2/a:2447-2451 gold
    45416 
    45417 > color #25.2/a:2499-2506 green yellow
    45418 
    45419 > color #25.2/a:2499-2506 green yellow target c
    45420 
    45421 > ~show #25.2
    45422 
    45423 > ~hbonds #25.2
    45424 
    45425 > name to_show
    45426 > #25.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45427 
    45428 > show to_show
    45429 
    45430 > ~cartoon #25.2
    45431 
    45432 > cartoon #25.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45433 
    45434 > transparency #25.2 60 target c
    45435 
    45436 > volume # color black transparency 0.8
    45437 
    45438 Expected a density maps specifier or a keyword 
    45439 
    45440 > volume zone # nearAtoms #25.2/a:2058-2064,2499-2506,2447,2450,2451 &
    45441 > sideonly range 2
    45442 
    45443 Missing or invalid "volumes" argument: invalid density maps specifier 
    45444 
    45445 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J241_c2.png height
    45446 > 600 width 600 supersample 3
    45447 
    45448 > hide #!25.2 models
    45449 
    45450 > hide #!23.2 models
    45451 
    45452 > show #!25.3 models
    45453 
    45454 > hide #25.3
    45455 
    45456 > color #25.3/Y maroon
    45457 
    45458 > color #25.3/Z rebecca purple
    45459 
    45460 > color #25.3/a:2058-2064 cornflower blue
    45461 
    45462 > color #25.3/a:2447-2451 gold
    45463 
    45464 > color #25.3/a:2499-2506 green yellow
    45465 
    45466 > color #25.3/a:2499-2506 green yellow target c
    45467 
    45468 > ~show #25.3
    45469 
    45470 > ~hbonds #25.3
    45471 
    45472 > name to_show
    45473 > #25.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45474 
    45475 > show to_show
    45476 
    45477 > ~cartoon #25.3
    45478 
    45479 > cartoon #25.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45480 
    45481 > transparency #25.3 60 target c
    45482 
    45483 > volume # color black transparency 0.8
    45484 
    45485 Expected a density maps specifier or a keyword 
    45486 
    45487 > volume zone # nearAtoms #25.3/a:2058-2064,2499-2506,2447,2450,2451 &
    45488 > sideonly range 2
    45489 
    45490 Missing or invalid "volumes" argument: invalid density maps specifier 
    45491 
    45492 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J242_c3.png height
    45493 > 600 width 600 supersample 3
    45494 
    45495 > hide #!25.3 models
    45496 
    45497 > hide #!23.3 models
    45498 
    45499 > show #!25.4 models
    45500 
    45501 > hide #25.4
    45502 
    45503 > color #25.4/Y maroon
    45504 
    45505 > color #25.4/Z rebecca purple
    45506 
    45507 > color #25.4/a:2058-2064 cornflower blue
    45508 
    45509 > color #25.4/a:2447-2451 gold
    45510 
    45511 > color #25.4/a:2499-2506 green yellow
    45512 
    45513 > color #25.4/a:2499-2506 green yellow target c
    45514 
    45515 > ~show #25.4
    45516 
    45517 > ~hbonds #25.4
    45518 
    45519 > name to_show
    45520 > #25.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45521 
    45522 > show to_show
    45523 
    45524 > ~cartoon #25.4
    45525 
    45526 > cartoon #25.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45527 
    45528 > transparency #25.4 60 target c
    45529 
    45530 > volume # color black transparency 0.8
    45531 
    45532 Expected a density maps specifier or a keyword 
    45533 
    45534 > volume zone # nearAtoms #25.4/a:2058-2064,2499-2506,2447,2450,2451 &
    45535 > sideonly range 2
    45536 
    45537 Missing or invalid "volumes" argument: invalid density maps specifier 
    45538 
    45539 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J243_c4.png height
    45540 > 600 width 600 supersample 3
    45541 
    45542 > hide #!25.4 models
    45543 
    45544 > hide #!23.4 models
    45545 
    45546 > show #!25.5 models
    45547 
    45548 > hide #25.5
    45549 
    45550 > color #25.5/Y maroon
    45551 
    45552 > color #25.5/Z rebecca purple
    45553 
    45554 > color #25.5/a:2058-2064 cornflower blue
    45555 
    45556 > color #25.5/a:2447-2451 gold
    45557 
    45558 > color #25.5/a:2499-2506 green yellow
    45559 
    45560 > color #25.5/a:2499-2506 green yellow target c
    45561 
    45562 > ~show #25.5
    45563 
    45564 > ~hbonds #25.5
    45565 
    45566 > name to_show #25.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,1
    45567 
    45568 > hide #!25.5 models
    45569 
    45570 > graphics quality 6
    45571 
    45572 > show #!25.3 models
    45573 
    45574 > hide #25.3
    45575 
    45576 > color #25.3/Y maroon
    45577 
    45578 > color #25.3/Z rebecca purple
    45579 
    45580 > color #25.3/a:2058-2064 cornflower blue
    45581 
    45582 > color #25.3/a:2447-2451 gold
    45583 
    45584 > color #25.3/a:2499-2506 green yellow
    45585 
    45586 > color #25.3/a:2499-2506 green yellow target c
    45587 
    45588 > ~show #25.3
    45589 
    45590 > ~hbonds #25.3
    45591 
    45592 > name to_show
    45593 > #25.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45594 
    45595 > show to_show
    45596 
    45597 > ~cartoon #25.3
    45598 
    45599 > cartoon #25.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45600 
    45601 > transparency #25.3 60 target c
    45602 
    45603 > volume # color black transparency 0.8
    45604 
    45605 Expected a density maps specifier or a keyword 
    45606 
    45607 > volume zone # nearAtoms #25.3/a:2058-2064,2499-2506,2447,2450,2451 &
    45608 > sideonly range 2
    45609 
    45610 Missing or invalid "volumes" argument: invalid density maps specifier 
    45611 
    45612 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J242_c3.png height
    45613 > 600 width 600 supersample 3
    45614 
    45615 > hide #!25.3 models
    45616 
    45617 > hide #!23.3 models
    45618 
    45619 > show #!25.4 models
    45620 
    45621 > hide #25.4
    45622 
    45623 > color #25.4/Y maroon
    45624 
    45625 > color #25.4/Z rebecca purple
    45626 
    45627 > color #25.4/a:2058-2064 cornflower blue
    45628 
    45629 > color #25.4/a:2447-2451 gold
    45630 
    45631 > color #25.4/a:2499-2506 green yellow
    45632 
    45633 > color #25.4/a:2499-2506 green yellow target c
    45634 
    45635 > ~show #25.4
    45636 
    45637 > ~hbonds #25.4
    45638 
    45639 > name to_show
    45640 > #25.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45641 
    45642 > show to_show
    45643 
    45644 > ~cartoon #25.4
    45645 
    45646 > cartoon #25.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45647 
    45648 > transparency #25.4 60 target c
    45649 
    45650 > volume # color black transparency 0.8
    45651 
    45652 Expected a density maps specifier or a keyword 
    45653 
    45654 > volume zone # nearAtoms #25.4/a:2058-2064,2499-2506,2447,2450,2451 &
    45655 > sideonly range 2
    45656 
    45657 Missing or invalid "volumes" argument: invalid density maps specifier 
    45658 
    45659 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J243_c4.png height
    45660 > 600 width 600 supersample 3
    45661 
    45662 > hide #!25.4 models
    45663 
    45664 > hide #!23.4 models
    45665 
    45666 > show #!25.4 models
    45667 
    45668 > show #!25.5 models
    45669 
    45670 > hide #!25.4 models
    45671 
    45672 > show #!25.6 models
    45673 
    45674 > hide #!25.5 models
    45675 
    45676 > show #!25.5 models
    45677 
    45678 > hide #!25.6 models
    45679 
    45680 > show #!25.4 models
    45681 
    45682 > hide #!25.5 models
    45683 
    45684 > show #!25.3 models
    45685 
    45686 > hide #!25.4 models
    45687 
    45688 > show #!25.4 models
    45689 
    45690 > hide #!25.3 models
    45691 
    45692 > hide #!25.4 models
    45693 
    45694 > show #!25.3 models
    45695 
    45696 > hide #25.3
    45697 
    45698 > color #25.3/Y maroon
    45699 
    45700 > color #25.3/Z rebecca purple
    45701 
    45702 > color #25.3/a:2058-2064 cornflower blue
    45703 
    45704 > color #25.3/a:2447-2451 gold
    45705 
    45706 > color #25.3/a:2499-2506 green yellow
    45707 
    45708 > color #25.3/a:2499-2506 green yellow target c
    45709 
    45710 > ~show #25.3
    45711 
    45712 > ~hbonds #25.3
    45713 
    45714 > name to_show
    45715 > #25.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45716 
    45717 > show to_show
    45718 
    45719 > ~cartoon #25.3
    45720 
    45721 > cartoon #25.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45722 
    45723 > transparency #25.3 60 target c
    45724 
    45725 > volume # color black transparency 0.8
    45726 
    45727 Expected a density maps specifier or a keyword 
    45728 
    45729 > volume zone # nearAtoms #25.3/a:2058-2064,2499-2506,2447,2450,2451 &
    45730 > sideonly range 2
    45731 
    45732 Missing or invalid "volumes" argument: invalid density maps specifier 
    45733 
    45734 > hide #!25.3 models
    45735 
    45736 > hide #!23.3 models
    45737 
    45738 > show #!25.4 models
    45739 
    45740 > hide #25.4
    45741 
    45742 > color #25.4/Y maroon
    45743 
    45744 > color #25.4/Z rebecca purple
    45745 
    45746 > color #25.4/a:2058-2064 cornflower blue
    45747 
    45748 > color #25.4/a:2447-2451 gold
    45749 
    45750 > color #25.4/a:2499-2506 green yellow
    45751 
    45752 > color #25.4/a:2499-2506 green yellow target c
    45753 
    45754 > ~show #25.4
    45755 
    45756 > ~hbonds #25.4
    45757 
    45758 > name to_show
    45759 > #25.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45760 
    45761 > show to_show
    45762 
    45763 > ~cartoon #25.4
    45764 
    45765 > cartoon #25.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45766 
    45767 > transparency #25.4 60 target c
    45768 
    45769 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J243_c4.png height
    45770 > 600 width 600 supersample 3
    45771 
    45772 > hide #!25.4 models
    45773 
    45774 > hide #!23.4 models
    45775 
    45776 > hide #25.5
    45777 
    45778 > color #25.5/Y maroon
    45779 
    45780 > color #25.5/Z rebecca purple
    45781 
    45782 > color #25.5/a:2058-2064 cornflower blue
    45783 
    45784 > color #25.5/a:2447-2451 gold
    45785 
    45786 > color #25.5/a:2499-2506 green yellow
    45787 
    45788 > color #25.5/a:2499-2506 green yellow target c
    45789 
    45790 > ~show #25.5
    45791 
    45792 > ~hbonds #25.5
    45793 
    45794 > name to_show
    45795 > #25.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45796 
    45797 > show to_show
    45798 
    45799 > ~cartoon #25.5
    45800 
    45801 > cartoon #25.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45802 
    45803 > transparency #25.5 60 target c
    45804 
    45805 > show #!25.5 models
    45806 
    45807 [Repeated 1 time(s)]
    45808 
    45809 > hide #25.5
    45810 
    45811 > color #25.5/Y maroon
    45812 
    45813 > color #25.5/Z rebecca purple
    45814 
    45815 > color #25.5/a:2058-2064 cornflower blue
    45816 
    45817 > color #25.5/a:2447-2451 gold
    45818 
    45819 > color #25.5/a:2499-2506 green yellow
    45820 
    45821 > color #25.5/a:2499-2506 green yellow target c
    45822 
    45823 > ~show #25.5
    45824 
    45825 > ~hbonds #25.5
    45826 
    45827 > name to_show
    45828 > #25.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45829 
    45830 > show to_show
    45831 
    45832 > ~cartoon #25.5
    45833 
    45834 > cartoon #25.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45835 
    45836 > transparency #25.5 60 target c
    45837 
    45838 > volume # color black transparency 0.8
    45839 
    45840 Expected a density maps specifier or a keyword 
    45841 
    45842 > volume zone # nearAtoms #25.5/a:2058-2064,2499-2506,2447,2450,2451 &
    45843 > sideonly range 2
    45844 
    45845 Missing or invalid "volumes" argument: invalid density maps specifier 
    45846 
    45847 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J244_c5.png height
    45848 > 600 width 600 supersample 3
    45849 
    45850 > hide #!25.5 models
    45851 
    45852 > hide #!23.5 models
    45853 
    45854 > show #!25.6 models
    45855 
    45856 > hide #25.6
    45857 
    45858 > color #25.6/Y maroon
    45859 
    45860 > color #25.6/Z rebecca purple
    45861 
    45862 > color #25.6/a:2058-2064 cornflower blue
    45863 
    45864 > color #25.6/a:2447-2451 gold
    45865 
    45866 > color #25.6/a:2499-2506 green yellow
    45867 
    45868 > color #25.6/a:2499-2506 green yellow target c
    45869 
    45870 > ~show #25.6
    45871 
    45872 > ~hbonds #25.6
    45873 
    45874 > name to_show
    45875 > #25.6/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45876 
    45877 > show to_show
    45878 
    45879 > ~cartoon #25.6
    45880 
    45881 > cartoon #25.6/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45882 
    45883 > transparency #25.6 60 target c
    45884 
    45885 > volume # color black transparency 0.8
    45886 
    45887 Expected a density maps specifier or a keyword 
    45888 
    45889 > volume zone # nearAtoms #25.6/a:2058-2064,2499-2506,2447,2450,2451 &
    45890 > sideonly range 2
    45891 
    45892 Missing or invalid "volumes" argument: invalid density maps specifier 
    45893 
    45894 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J245_c6.png height
    45895 > 600 width 600 supersample 3
    45896 
    45897 > hide #!25.6 models
    45898 
    45899 > hide #!23.6 models
    45900 
    45901 > show #!25.7 models
    45902 
    45903 > hide #25.7
    45904 
    45905 > color #25.7/Y maroon
    45906 
    45907 > color #25.7/Z rebecca purple
    45908 
    45909 > color #25.7/a:2058-2064 cornflower blue
    45910 
    45911 > color #25.7/a:2447-2451 gold
    45912 
    45913 > color #25.7/a:2499-2506 green yellow
    45914 
    45915 > color #25.7/a:2499-2506 green yellow target c
    45916 
    45917 > ~show #25.7
    45918 
    45919 > ~hbonds #25.7
    45920 
    45921 > name to_show
    45922 > #25.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45923 
    45924 > show to_show
    45925 
    45926 > ~cartoon #25.7
    45927 
    45928 > cartoon #25.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45929 
    45930 > transparency #25.7 60 target c
    45931 
    45932 > volume # color black transparency 0.8
    45933 
    45934 Expected a density maps specifier or a keyword 
    45935 
    45936 > volume zone # nearAtoms #25.7/a:2058-2064,2499-2506,2447,2450,2451 &
    45937 > sideonly range 2
    45938 
    45939 Missing or invalid "volumes" argument: invalid density maps specifier 
    45940 
    45941 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J246_c7.png height
    45942 > 600 width 600 supersample 3
    45943 
    45944 > hide #!25.7 models
    45945 
    45946 > hide #!23.7 models
    45947 
    45948 > show #!25.8 models
    45949 
    45950 > hide #25.8
    45951 
    45952 > color #25.8/Y maroon
    45953 
    45954 > color #25.8/Z rebecca purple
    45955 
    45956 > color #25.8/a:2058-2064 cornflower blue
    45957 
    45958 > color #25.8/a:2447-2451 gold
    45959 
    45960 > color #25.8/a:2499-2506 green yellow
    45961 
    45962 > color #25.8/a:2499-2506 green yellow target c
    45963 
    45964 > ~show #25.8
    45965 
    45966 > ~hbonds #25.8
    45967 
    45968 > name to_show
    45969 > #25.8/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    45970 
    45971 > show to_show
    45972 
    45973 > ~cartoon #25.8
    45974 
    45975 > cartoon #25.8/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    45976 
    45977 > transparency #25.8 60 target c
    45978 
    45979 > volume # color black transparency 0.8
    45980 
    45981 Expected a density maps specifier or a keyword 
    45982 
    45983 > volume zone # nearAtoms #25.8/a:2058-2064,2499-2506,2447,2450,2451 &
    45984 > sideonly range 2
    45985 
    45986 Missing or invalid "volumes" argument: invalid density maps specifier 
    45987 
    45988 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J247_c8.png height
    45989 > 600 width 600 supersample 3
    45990 
    45991 > hide #!25.8 models
    45992 
    45993 > hide #!23.8 models
    45994 
    45995 > show #!25.9 models
    45996 
    45997 > hide #25.9
    45998 
    45999 > color #25.9/Y maroon
    46000 
    46001 > color #25.9/Z rebecca purple
    46002 
    46003 > color #25.9/a:2058-2064 cornflower blue
    46004 
    46005 > color #25.9/a:2447-2451 gold
    46006 
    46007 > color #25.9/a:2499-2506 green yellow
    46008 
    46009 > color #25.9/a:2499-2506 green yellow target c
    46010 
    46011 > ~show #25.9
    46012 
    46013 > ~hbonds #25.9
    46014 
    46015 > name to_show
    46016 > #25.9/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46017 
    46018 > show to_show
    46019 
    46020 > ~cartoon #25.9
    46021 
    46022 > cartoon #25.9/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46023 
    46024 > transparency #25.9 60 target c
    46025 
    46026 > volume # color black transparency 0.8
    46027 
    46028 Expected a density maps specifier or a keyword 
    46029 
    46030 > volume zone # nearAtoms #25.9/a:2058-2064,2499-2506,2447,2450,2451 &
    46031 > sideonly range 2
    46032 
    46033 Missing or invalid "volumes" argument: invalid density maps specifier 
    46034 
    46035 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J248_c9.png height
    46036 > 600 width 600 supersample 3
    46037 
    46038 > hide #!25.9 models
    46039 
    46040 > hide #!23.9 models
    46041 
    46042 > view list
    46043 
    46044 Named views: A2503_view4_map, A2503_view5_map 
    46045 
    46046 > view A2503_view5_map
    46047 
    46048 > show #!25.1 models
    46049 
    46050 > hide #!25.1 models
    46051 
    46052 > show #!25.1 models
    46053 
    46054 > hide #!25.1 models
    46055 
    46056 > show #!1.2 models
    46057 
    46058 > show #!1.1 models
    46059 
    46060 > volume #1.1 level 0.015
    46061 
    46062 > hide #1.2
    46063 
    46064 > color #1.2/Y maroon
    46065 
    46066 > color #1.2/Z rebecca purple
    46067 
    46068 > color #1.2/a:2058-2064 cornflower blue
    46069 
    46070 > color #1.2/a:2447-2451 gold
    46071 
    46072 > color #1.2/a:2499-2506 green yellow
    46073 
    46074 > color #1.2/a:2499-2506 green yellow target c
    46075 
    46076 > ~show #1.2
    46077 
    46078 > ~hbonds #1.2
    46079 
    46080 > name to_show
    46081 > #1.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46082 
    46083 > show to_show
    46084 
    46085 > ~cartoon #1.2
    46086 
    46087 > cartoon #1.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46088 
    46089 > transparency #1.2 60 target c
    46090 
    46091 > volume #1.1 color black transparency 0.8
    46092 
    46093 > volume zone #1.1 nearAtoms #1.2/a:2058-2064,2499-2506,2447,2450,2451 &
    46094 > sideonly range 2
    46095 
    46096 > bond #1.2/Y:76@N3':101@C
    46097 
    46098 Created 0 bonds 
    46099 
    46100 > bond #1.2/Z:76@N3':101@C
    46101 
    46102 Created 0 bonds 
    46103 
    46104 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    46105 
    46106 > style #1.2/Y:101 ball
    46107 
    46108 Changed 8 atom styles 
    46109 
    46110 > style #1.2/Z:101 ball
    46111 
    46112 Changed 8 atom styles 
    46113 
    46114 > size #1.2/Y:101:76@N3' ballScale 0.10 stickRadius 0.06
    46115 
    46116 Changed 8 bond radii, 1 ball scales 
    46117 
    46118 > size #1.2/Z:101:76@N3' ballScale 0.10 stickRadius 0.06
    46119 
    46120 Changed 8 bond radii, 1 ball scales 
    46121 
    46122 > save /Users/dalar193/Desktop/A2503_view5/A2503_view5_8emm.png height 600
    46123 > width 600 supersample 3
    46124 
    46125 Directory "/Users/dalar193/Desktop/A2503_view5" does not exist 
    46126 
    46127 > hide #!1.2 models
    46128 
    46129 > hide #!1.1 models
    46130 
    46131 > show #!1.7 models
    46132 
    46133 > show #!1.6 models
    46134 
    46135 > volume #1.6 level 0.01
    46136 
    46137 > hide #1.7
    46138 
    46139 > color #1.7/Y maroon
    46140 
    46141 > color #1.7/Z rebecca purple
    46142 
    46143 > color #1.7/a:2058-2064 cornflower blue
    46144 
    46145 > color #1.7/a:2447-2451 gold
    46146 
    46147 > color #1.7/a:2499-2506 green yellow
    46148 
    46149 > color #1.7/a:2499-2506 green yellow target c
    46150 
    46151 > ~show #1.7
    46152 
    46153 > ~hbonds #1.7
    46154 
    46155 > name to_show
    46156 > #1.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46157 
    46158 > show to_show
    46159 
    46160 > ~cartoon #1.7
    46161 
    46162 > cartoon #1.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46163 
    46164 > transparency #1.7 60 target c
    46165 
    46166 > volume #1.6 color black transparency 0.8
    46167 
    46168 > volume zone #1.6 nearAtoms #1.7/a:2058-2064,2499-2506,2447,2450,2451 &
    46169 > sideonly range 2
    46170 
    46171 > save /Users/dalar193/Desktop/A2503_view5/A2503_view5_8cgk.png height 600
    46172 > width 600 supersample 3
    46173 
    46174 Directory "/Users/dalar193/Desktop/A2503_view5" does not exist 
    46175 
    46176 > hide #!1.7 models
    46177 
    46178 > hide #!1.6 models
    46179 
    46180 > show #!1.9 models
    46181 
    46182 > show #!1.8 models
    46183 
    46184 > volume #1.8 level 0.11
    46185 
    46186 > hide #1.9
    46187 
    46188 > color #1.9/Y maroon
    46189 
    46190 > color #1.9/Z rebecca purple
    46191 
    46192 > color #1.9/A:2058-2064 cornflower blue
    46193 
    46194 > color #1.9/A:2447-2451 gold
    46195 
    46196 > color #1.9/A:2499-2506 green yellow
    46197 
    46198 > color #1.9/A:2499-2506 green yellow target c
    46199 
    46200 > ~show #1.9
    46201 
    46202 > ~hbonds #1.9
    46203 
    46204 > name to_show
    46205 > #1.9/A:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46206 
    46207 > show to_show
    46208 
    46209 > ~cartoon #1.9
    46210 
    46211 > cartoon #1.9/A:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46212 
    46213 > transparency #1.9 60 target c
    46214 
    46215 > volume #1.8 color black transparency 0.8
    46216 
    46217 > volume zone #1.8 nearAtoms #1.9/A:2058-2064,2499-2506,2447,2450,2451 &
    46218 > sideonly range 2
    46219 
    46220 > save /Users/dalar193/Desktop/A2503_view5/A2503_view5_7bv8.png height 600
    46221 > width 600 supersample 3
    46222 
    46223 Directory "/Users/dalar193/Desktop/A2503_view5" does not exist 
    46224 
    46225 > hide #!1.9 models
    46226 
    46227 > hide #!1.8 models
    46228 
    46229 > show #!1.11 models
    46230 
    46231 > show #!1.10 models
    46232 
    46233 > volume #1.10 level 0.025
    46234 
    46235 > hide #1.11
    46236 
    46237 > color #1.11/Y maroon
    46238 
    46239 > color #1.11/B8 rebecca purple
    46240 
    46241 > color #1.11/BA:2058-2064 cornflower blue
    46242 
    46243 > color #1.11/BA:2447-2451 gold
    46244 
    46245 > color #1.11/BA:2499-2506 green yellow
    46246 
    46247 > color #1.11/BA:2499-2506 green yellow target c
    46248 
    46249 > ~show #1.11
    46250 
    46251 > ~hbonds #1.11
    46252 
    46253 > name to_show
    46254 > #1.11/BA:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/B8:73-76,101
    46255 
    46256 > show to_show
    46257 
    46258 > ~cartoon #1.11
    46259 
    46260 > cartoon #1.11/BA:2058-2064,2499-2506,2447-2451/Y:73-76/B8:73-76
    46261 
    46262 > transparency #1.11 60 target c
    46263 
    46264 > volume #1.10 color black transparency 0.8
    46265 
    46266 > volume zone #1.10 nearAtoms #1.11/BA:2058-2064,2499-2506,2447,2450,2451 &
    46267 > sideonly range 2
    46268 
    46269 > bond #1.11/B5:24@C/B8:76@O3'
    46270 
    46271 Created 0 bonds 
    46272 
    46273 > cartoon #1.11/B5
    46274 
    46275 > style #1.11/B5' ball
    46276 
    46277 Changed 0 atom styles 
    46278 
    46279 > size #1.11/B5/B8:76@O3' ballScale 0.10 stickRadius 0.06
    46280 
    46281 Changed 152 bond radii, 1 ball scales 
    46282 
    46283 > save /Users/dalar193/Desktop/A2503_view5/A2503_view5_7o1a.png height 600
    46284 > width 600 supersample 3
    46285 
    46286 Directory "/Users/dalar193/Desktop/A2503_view5" does not exist 
    46287 
    46288 > hide #!1.11 models
    46289 
    46290 > hide #!1.10 models
    46291 
    46292 > show #!1.14 models
    46293 
    46294 > show #!1.13 models
    46295 
    46296 > volume #1.13 level 0.01
    46297 
    46298 > hide #1.14
    46299 
    46300 > color #1.14/Y maroon
    46301 
    46302 > color #1.14/Z rebecca purple
    46303 
    46304 > color #1.14/a:2058-2064 cornflower blue
    46305 
    46306 > color #1.14/a:2447-2451 gold
    46307 
    46308 > color #1.14/a:2499-2506 green yellow
    46309 
    46310 > color #1.14/a:2499-2506 green yellow target c
    46311 
    46312 > ~show #1.14
    46313 
    46314 > ~hbonds #1.14
    46315 
    46316 > name to_show
    46317 > #1.14/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46318 
    46319 > show to_show
    46320 
    46321 > ~cartoon #1.14
    46322 
    46323 > cartoon #1.14/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46324 
    46325 > transparency #1.14 60 target c
    46326 
    46327 > volume #1.13 color black transparency 0.8
    46328 
    46329 > volume zone #1.13 nearAtoms #1.14/a:2058-2064,2499-2506,2447,2450,2451 &
    46330 > sideonly range 2
    46331 
    46332 > save /Users/dalar193/Desktop/A2503_view5/A2503_view5_8cam.png height 600
    46333 > width 600 supersample 3
    46334 
    46335 Directory "/Users/dalar193/Desktop/A2503_view5" does not exist 
    46336 
    46337 > hide #!1.14 models
    46338 
    46339 > hide #!1.13 models
    46340 
    46341 > show #!1.2 models
    46342 
    46343 > show #!1.1 models
    46344 
    46345 > volume #1.1 level 0.015
    46346 
    46347 > hide #1.2
    46348 
    46349 > color #1.2/Y maroon
    46350 
    46351 > color #1.2/Z rebecca purple
    46352 
    46353 > color #1.2/a:2058-2064 cornflower blue
    46354 
    46355 > color #1.2/a:2447-2451 gold
    46356 
    46357 > color #1.2/a:2499-2506 green yellow
    46358 
    46359 > color #1.2/a:2499-2506 green yellow target c
    46360 
    46361 > ~show #1.2
    46362 
    46363 > ~hbonds #1.2
    46364 
    46365 > name to_show
    46366 > #1.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46367 
    46368 > show to_show
    46369 
    46370 > ~cartoon #1.2
    46371 
    46372 > cartoon #1.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46373 
    46374 > transparency #1.2 60 target c
    46375 
    46376 > volume #1.1 color black transparency 0.8
    46377 
    46378 > volume zone #1.1 nearAtoms #1.2/a:2058-2064,2499-2506,2447,2450,2451 &
    46379 > sideonly range 2
    46380 
    46381 > bond #1.2/Y:76@N3':101@C
    46382 
    46383 Created 0 bonds 
    46384 
    46385 > bond #1.2/Z:76@N3':101@C
    46386 
    46387 Created 0 bonds 
    46388 
    46389 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    46390 
    46391 > style #1.2/Y:101 ball
    46392 
    46393 Changed 8 atom styles 
    46394 
    46395 > style #1.2/Z:101 ball
    46396 
    46397 Changed 8 atom styles 
    46398 
    46399 > size #1.2/Y:101:76@N3' ballScale 0.10 stickRadius 0.06
    46400 
    46401 Changed 8 bond radii, 1 ball scales 
    46402 
    46403 > size #1.2/Z:101:76@N3' ballScale 0.10 stickRadius 0.06
    46404 
    46405 Changed 8 bond radii, 1 ball scales 
    46406 
    46407 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_8emm.png height
    46408 > 600 width 600 supersample 3
    46409 
    46410 > hide #!1.2 models
    46411 
    46412 > hide #!1.1 models
    46413 
    46414 > show #!1.7 models
    46415 
    46416 > show #!1.6 models
    46417 
    46418 > volume #1.6 level 0.01
    46419 
    46420 > hide #1.7
    46421 
    46422 > color #1.7/Y maroon
    46423 
    46424 > color #1.7/Z rebecca purple
    46425 
    46426 > color #1.7/a:2058-2064 cornflower blue
    46427 
    46428 > color #1.7/a:2447-2451 gold
    46429 
    46430 > color #1.7/a:2499-2506 green yellow
    46431 
    46432 > color #1.7/a:2499-2506 green yellow target c
    46433 
    46434 > ~show #1.7
    46435 
    46436 > ~hbonds #1.7
    46437 
    46438 > name to_show
    46439 > #1.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46440 
    46441 > show to_show
    46442 
    46443 > ~cartoon #1.7
    46444 
    46445 > cartoon #1.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46446 
    46447 > transparency #1.7 60 target c
    46448 
    46449 > volume #1.6 color black transparency 0.8
    46450 
    46451 > volume zone #1.6 nearAtoms #1.7/a:2058-2064,2499-2506,2447,2450,2451 &
    46452 > sideonly range 2
    46453 
    46454 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_8cgk.png height
    46455 > 600 width 600 supersample 3
    46456 
    46457 > hide #!1.7 models
    46458 
    46459 > hide #!1.6 models
    46460 
    46461 > show #!1.9 models
    46462 
    46463 > show #!1.8 models
    46464 
    46465 > volume #1.8 level 0.11
    46466 
    46467 > hide #1.9
    46468 
    46469 > color #1.9/Y maroon
    46470 
    46471 > color #1.9/Z rebecca purple
    46472 
    46473 > color #1.9/A:2058-2064 cornflower blue
    46474 
    46475 > color #1.9/A:2447-2451 gold
    46476 
    46477 > color #1.9/A:2499-2506 green yellow
    46478 
    46479 > color #1.9/A:2499-2506 green yellow target c
    46480 
    46481 > ~show #1.9
    46482 
    46483 > ~hbonds #1.9
    46484 
    46485 > name to_show
    46486 > #1.9/A:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46487 
    46488 > show to_show
    46489 
    46490 > ~cartoon #1.9
    46491 
    46492 > cartoon #1.9/A:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46493 
    46494 > transparency #1.9 60 target c
    46495 
    46496 > volume #1.8 color black transparency 0.8
    46497 
    46498 > volume zone #1.8 nearAtoms #1.9/A:2058-2064,2499-2506,2447,2450,2451 &
    46499 > sideonly range 2
    46500 
    46501 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_7bv8.png height
    46502 > 600 width 600 supersample 3
    46503 
    46504 > hide #!1.9 models
    46505 
    46506 > hide #!1.8 models
    46507 
    46508 > show #!1.11 models
    46509 
    46510 > show #!1.10 models
    46511 
    46512 > volume #1.10 level 0.025
    46513 
    46514 > hide #1.11
    46515 
    46516 > color #1.11/Y maroon
    46517 
    46518 > color #1.11/B8 rebecca purple
    46519 
    46520 > color #1.11/BA:2058-2064 cornflower blue
    46521 
    46522 > color #1.11/BA:2447-2451 gold
    46523 
    46524 > color #1.11/BA:2499-2506 green yellow
    46525 
    46526 > color #1.11/BA:2499-2506 green yellow target c
    46527 
    46528 > ~show #1.11
    46529 
    46530 > ~hbonds #1.11
    46531 
    46532 > name to_show
    46533 > #1.11/BA:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/B8:73-76,101
    46534 
    46535 > show to_show
    46536 
    46537 > ~cartoon #1.11
    46538 
    46539 > cartoon #1.11/BA:2058-2064,2499-2506,2447-2451/Y:73-76/B8:73-76
    46540 
    46541 > transparency #1.11 60 target c
    46542 
    46543 > volume #1.10 color black transparency 0.8
    46544 
    46545 > volume zone #1.10 nearAtoms #1.11/BA:2058-2064,2499-2506,2447,2450,2451 &
    46546 > sideonly range 2
    46547 
    46548 > bond #1.11/B5:24@C/B8:76@O3'
    46549 
    46550 Created 0 bonds 
    46551 
    46552 > cartoon #1.11/B5
    46553 
    46554 > style #1.11/B5' ball
    46555 
    46556 Changed 0 atom styles 
    46557 
    46558 > size #1.11/B5/B8:76@O3' ballScale 0.10 stickRadius 0.06
    46559 
    46560 Changed 152 bond radii, 1 ball scales 
    46561 
    46562 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_7o1a.png height
    46563 > 600 width 600 supersample 3
    46564 
    46565 > hide #!1.11 models
    46566 
    46567 > hide #!1.10 models
    46568 
    46569 > show #!1.14 models
    46570 
    46571 > show #!1.13 models
    46572 
    46573 > volume #1.13 level 0.01
    46574 
    46575 > hide #1.14
    46576 
    46577 > color #1.14/Y maroon
    46578 
    46579 > color #1.14/Z rebecca purple
    46580 
    46581 > color #1.14/a:2058-2064 cornflower blue
    46582 
    46583 > color #1.14/a:2447-2451 gold
    46584 
    46585 > color #1.14/a:2499-2506 green yellow
    46586 
    46587 > color #1.14/a:2499-2506 green yellow target c
    46588 
    46589 > ~show #1.14
    46590 
    46591 > ~hbonds #1.14
    46592 
    46593 > name to_show
    46594 > #1.14/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46595 
    46596 > show to_show
    46597 
    46598 > ~cartoon #1.14
    46599 
    46600 > cartoon #1.14/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46601 
    46602 > transparency #1.14 60 target c
    46603 
    46604 > volume #1.13 color black transparency 0.8
    46605 
    46606 > volume zone #1.13 nearAtoms #1.14/a:2058-2064,2499-2506,2447,2450,2451 &
    46607 > sideonly range 2
    46608 
    46609 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_8cam.png height
    46610 > 600 width 600 supersample 3
    46611 
    46612 > hide #!1.14 models
    46613 
    46614 > hide #!1.13 models
    46615 
    46616 > show #!6.10 models
    46617 
    46618 > show #!4.10 models
    46619 
    46620 > volume #4.10 level 0.55
    46621 
    46622 > hide #6.10
    46623 
    46624 > color #6.10/Y maroon
    46625 
    46626 > color #6.10/Z rebecca purple
    46627 
    46628 > color #6.10/a:2058-2064 cornflower blue
    46629 
    46630 > color #6.10/a:2447-2451 gold
    46631 
    46632 > color #6.10/a:2499-2506 green yellow
    46633 
    46634 > color #6.10/a:2499-2506 green yellow target c
    46635 
    46636 > ~show #6.10
    46637 
    46638 > ~hbonds #6.10
    46639 
    46640 > name to_show
    46641 > #6.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46642 
    46643 > show to_show
    46644 
    46645 > ~cartoon #6.10
    46646 
    46647 > cartoon #6.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46648 
    46649 > transparency #6.10 60 target c
    46650 
    46651 > volume #4.10 color black transparency 0.8
    46652 
    46653 > volume zone #4.10 nearAtoms #6.10/a:2058-2064,2499-2506,2447,2450,2451 &
    46654 > sideonly range 2
    46655 
    46656 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d9_J83_cl0.png
    46657 > height 600 width 600 supersample 3
    46658 
    46659 > hide #!6.10 models
    46660 
    46661 > hide #!4.10 models
    46662 
    46663 > show #!6.1 models
    46664 
    46665 > show #!4.1 models
    46666 
    46667 > volume #4.1 level 0.6
    46668 
    46669 > hide #6.1
    46670 
    46671 > color #6.1/Y maroon
    46672 
    46673 > color #6.1/Z rebecca purple
    46674 
    46675 > color #6.1/a:2058-2064 cornflower blue
    46676 
    46677 > color #6.1/a:2447-2451 gold
    46678 
    46679 > color #6.1/a:2499-2506 green yellow
    46680 
    46681 > color #6.1/a:2499-2506 green yellow target c
    46682 
    46683 > ~show #6.1
    46684 
    46685 > ~hbonds #6.1
    46686 
    46687 > name to_show
    46688 > #6.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46689 
    46690 > show to_show
    46691 
    46692 > ~cartoon #6.1
    46693 
    46694 > cartoon #6.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46695 
    46696 > transparency #6.1 60 target c
    46697 
    46698 > volume #4.1 color black transparency 0.8
    46699 
    46700 > volume zone #4.1 nearAtoms #6.1/a:2058-2064,2499-2506,2447,2450,2451 &
    46701 > sideonly range 2
    46702 
    46703 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d9_J84_cl1.png
    46704 > height 600 width 600 supersample 3
    46705 
    46706 > hide #!6.1 models
    46707 
    46708 > hide #!4.1 models
    46709 
    46710 > show #!6.2 models
    46711 
    46712 > show #!4.2 models
    46713 
    46714 > volume #4.2 level 0.7
    46715 
    46716 > hide #6.2
    46717 
    46718 > color #6.2/Y maroon
    46719 
    46720 > color #6.2/Z rebecca purple
    46721 
    46722 > color #6.2/a:2058-2064 cornflower blue
    46723 
    46724 > color #6.2/a:2447-2451 gold
    46725 
    46726 > color #6.2/a:2499-2506 green yellow
    46727 
    46728 > color #6.2/a:2499-2506 green yellow target c
    46729 
    46730 > ~show #6.2
    46731 
    46732 > ~hbonds #6.2
    46733 
    46734 > name to_show
    46735 > #6.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46736 
    46737 > show to_show
    46738 
    46739 > ~cartoon #6.2
    46740 
    46741 > cartoon #6.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46742 
    46743 > transparency #6.2 60 target c
    46744 
    46745 > volume #4.2 color black transparency 0.8
    46746 
    46747 > volume zone #4.2 nearAtoms #6.2/a:2058-2064,2499-2506,2447,2450,2451 &
    46748 > sideonly range 2
    46749 
    46750 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d9_J85_cl2.png
    46751 > height 600 width 600 supersample 3
    46752 
    46753 > hide #!6.2 models
    46754 
    46755 > hide #!4.2 models
    46756 
    46757 > show #!6.3 models
    46758 
    46759 > show #!4.3 models
    46760 
    46761 > volume #4.3 level 0.6
    46762 
    46763 > hide #6.3
    46764 
    46765 > color #6.3/Y maroon
    46766 
    46767 > color #6.3/Z rebecca purple
    46768 
    46769 > color #6.3/a:2058-2064 cornflower blue
    46770 
    46771 > color #6.3/a:2447-2451 gold
    46772 
    46773 > color #6.3/a:2499-2506 green yellow
    46774 
    46775 > color #6.3/a:2499-2506 green yellow target c
    46776 
    46777 > ~show #6.3
    46778 
    46779 > ~hbonds #6.3
    46780 
    46781 > name to_show
    46782 > #6.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46783 
    46784 > show to_show
    46785 
    46786 > ~cartoon #6.3
    46787 
    46788 > cartoon #6.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46789 
    46790 > transparency #6.3 60 target c
    46791 
    46792 > volume #4.3 color black transparency 0.8
    46793 
    46794 > volume zone #4.3 nearAtoms #6.3/a:2058-2064,2499-2506,2447,2450,2451 &
    46795 > sideonly range 2
    46796 
    46797 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d9_J86_cl3.png
    46798 > height 600 width 600 supersample 3
    46799 
    46800 > hide #!6.3 models
    46801 
    46802 > hide #!4.3 models
    46803 
    46804 > show #!6.4 models
    46805 
    46806 > show #!4.4 models
    46807 
    46808 > volume #4.4 level 0.65
    46809 
    46810 > hide #6.4
    46811 
    46812 > color #6.4/Y maroon
    46813 
    46814 > color #6.4/Z rebecca purple
    46815 
    46816 > color #6.4/a:2058-2064 cornflower blue
    46817 
    46818 > color #6.4/a:2447-2451 gold
    46819 
    46820 > color #6.4/a:2499-2506 green yellow
    46821 
    46822 > color #6.4/a:2499-2506 green yellow target c
    46823 
    46824 > ~show #6.4
    46825 
    46826 > ~hbonds #6.4
    46827 
    46828 > name to_show
    46829 > #6.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46830 
    46831 > show to_show
    46832 
    46833 > ~cartoon #6.4
    46834 
    46835 > cartoon #6.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46836 
    46837 > transparency #6.4 60 target c
    46838 
    46839 > volume #4.4 color black transparency 0.8
    46840 
    46841 > volume zone #4.4 nearAtoms #6.4/a:2058-2064,2499-2506,2447,2450,2451 &
    46842 > sideonly range 2
    46843 
    46844 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d9_J87_cl4.png
    46845 > height 600 width 600 supersample 3
    46846 
    46847 > hide #!6.4 models
    46848 
    46849 > hide #!4.4 models
    46850 
    46851 > show #!6.5 models
    46852 
    46853 > show #!4.5 models
    46854 
    46855 > volume #4.5 level 0.65
    46856 
    46857 > hide #6.5
    46858 
    46859 > color #6.5/Y maroon
    46860 
    46861 > color #6.5/Z rebecca purple
    46862 
    46863 > color #6.5/a:2058-2064 cornflower blue
    46864 
    46865 > color #6.5/a:2447-2451 gold
    46866 
    46867 > color #6.5/a:2499-2506 green yellow
    46868 
    46869 > color #6.5/a:2499-2506 green yellow target c
    46870 
    46871 > ~show #6.5
    46872 
    46873 > ~hbonds #6.5
    46874 
    46875 > name to_show
    46876 > #6.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46877 
    46878 > show to_show
    46879 
    46880 > ~cartoon #6.5
    46881 
    46882 > cartoon #6.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46883 
    46884 > transparency #6.5 60 target c
    46885 
    46886 > volume #4.5 color black transparency 0.8
    46887 
    46888 > volume zone #4.5 nearAtoms #6.5/a:2058-2064,2499-2506,2447,2450,2451 &
    46889 > sideonly range 2
    46890 
    46891 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d9_J88_cl5.png
    46892 > height 600 width 600 supersample 3
    46893 
    46894 > hide #!6.5 models
    46895 
    46896 > hide #!4.5 models
    46897 
    46898 > show #!6.6 models
    46899 
    46900 > show #!4.6 models
    46901 
    46902 > volume #4.6 level 0.6
    46903 
    46904 > hide #6.6
    46905 
    46906 > color #6.6/Y maroon
    46907 
    46908 > color #6.6/Z rebecca purple
    46909 
    46910 > color #6.6/a:2058-2064 cornflower blue
    46911 
    46912 > color #6.6/a:2447-2451 gold
    46913 
    46914 > color #6.6/a:2499-2506 green yellow
    46915 
    46916 > color #6.6/a:2499-2506 green yellow target c
    46917 
    46918 > ~show #6.6
    46919 
    46920 > ~hbonds #6.6
    46921 
    46922 > name to_show
    46923 > #6.6/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46924 
    46925 > show to_show
    46926 
    46927 > ~cartoon #6.6
    46928 
    46929 > cartoon #6.6/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46930 
    46931 > transparency #6.6 60 target c
    46932 
    46933 > volume #4.6 color black transparency 0.8
    46934 
    46935 > volume zone #4.6 nearAtoms #6.6/a:2058-2064,2499-2506,2447,2450,2451 &
    46936 > sideonly range 2
    46937 
    46938 > ~show #6.6/a:2059-2060
    46939 
    46940 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d9_J89_cl6.png
    46941 > height 600 width 600 supersample 3
    46942 
    46943 > hide #!6.6 models
    46944 
    46945 > hide #!4.6 models
    46946 
    46947 > show #!6.7 models
    46948 
    46949 > show #!4.7 models
    46950 
    46951 > volume #4.7 level 0.65
    46952 
    46953 > hide #6.7
    46954 
    46955 > color #6.7/Y maroon
    46956 
    46957 > color #6.7/Z rebecca purple
    46958 
    46959 > color #6.7/a:2058-2064 cornflower blue
    46960 
    46961 > color #6.7/a:2447-2451 gold
    46962 
    46963 > color #6.7/a:2499-2506 green yellow
    46964 
    46965 > color #6.7/a:2499-2506 green yellow target c
    46966 
    46967 > ~show #6.7
    46968 
    46969 > ~hbonds #6.7
    46970 
    46971 > name to_show
    46972 > #6.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    46973 
    46974 > show to_show
    46975 
    46976 > ~cartoon #6.7
    46977 
    46978 > cartoon #6.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    46979 
    46980 > transparency #6.7 60 target c
    46981 
    46982 > volume #4.7 color black transparency 0.8
    46983 
    46984 > volume zone #4.7 nearAtoms #6.7/a:2058-2064,2499-2506,2447,2450,2451 &
    46985 > sideonly range 2
    46986 
    46987 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d9_J90_cl7.png
    46988 > height 600 width 600 supersample 3
    46989 
    46990 > hide #!6.7 models
    46991 
    46992 > hide #!4.7 models
    46993 
    46994 > show #!6.8 models
    46995 
    46996 > show #!4.8 models
    46997 
    46998 > volume #4.8 level 0.55
    46999 
    47000 > hide #6.8
    47001 
    47002 > color #6.8/Y maroon
    47003 
    47004 > color #6.8/Z rebecca purple
    47005 
    47006 > color #6.8/a:2058-2064 cornflower blue
    47007 
    47008 > color #6.8/a:2447-2451 gold
    47009 
    47010 > color #6.8/a:2499-2506 green yellow
    47011 
    47012 > color #6.8/a:2499-2506 green yellow target c
    47013 
    47014 > ~show #6.8
    47015 
    47016 > ~hbonds #6.8
    47017 
    47018 > name to_show
    47019 > #6.8/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47020 
    47021 > show to_show
    47022 
    47023 > ~cartoon #6.8
    47024 
    47025 > cartoon #6.8/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47026 
    47027 > transparency #6.8 60 target c
    47028 
    47029 > volume #4.8 color black transparency 0.8
    47030 
    47031 > volume zone #4.8 nearAtoms #6.8/a:2058-2064,2499-2506,2447,2450,2451 &
    47032 > sideonly range 2
    47033 
    47034 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d9_J91_cl8.png
    47035 > height 600 width 600 supersample 3
    47036 
    47037 > hide #!6.8 models
    47038 
    47039 > hide #!4.8 models
    47040 
    47041 > show #!6.9 models
    47042 
    47043 > show #!4.9 models
    47044 
    47045 > volume #4.9 level 0.55
    47046 
    47047 > hide #6.9
    47048 
    47049 > color #6.9/Y maroon
    47050 
    47051 > color #6.9/Z rebecca purple
    47052 
    47053 > color #6.9/a:2058-2064 cornflower blue
    47054 
    47055 > color #6.9/a:2447-2451 gold
    47056 
    47057 > color #6.9/a:2499-2506 green yellow
    47058 
    47059 > color #6.9/a:2499-2506 green yellow target c
    47060 
    47061 > ~show #6.9
    47062 
    47063 > ~hbonds #6.9
    47064 
    47065 > name to_show
    47066 > #6.9/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47067 
    47068 > show to_show
    47069 
    47070 > ~cartoon #6.9
    47071 
    47072 > cartoon #6.9/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47073 
    47074 > transparency #6.9 60 target c
    47075 
    47076 > volume #4.9 color black transparency 0.8
    47077 
    47078 > volume zone #4.9 nearAtoms #6.9/a:2058-2064,2499-2506,2447,2450,2451 &
    47079 > sideonly range 2
    47080 
    47081 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d9_J92_cl9.png
    47082 > height 600 width 600 supersample 3
    47083 
    47084 > hide #!6.9 models
    47085 
    47086 > hide #!4.9 models
    47087 
    47088 > show #!14.10 models
    47089 
    47090 > show #!12.10 models
    47091 
    47092 > volume #12.10 level 0.5
    47093 
    47094 > hide #14.10
    47095 
    47096 > color #14.10/Y maroon
    47097 
    47098 > color #14.10/Z rebecca purple
    47099 
    47100 > color #14.10/a:2058-2064 cornflower blue
    47101 
    47102 > color #14.10/a:2447-2451 gold
    47103 
    47104 > color #14.10/a:2499-2506 green yellow
    47105 
    47106 > color #14.10/a:2499-2506 green yellow target c
    47107 
    47108 > ~show #14.10
    47109 
    47110 > ~hbonds #14.10
    47111 
    47112 > name to_show
    47113 > #14.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47114 
    47115 > show to_show
    47116 
    47117 > ~cartoon #14.10
    47118 
    47119 > cartoon #14.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47120 
    47121 > transparency #14.10 60 target c
    47122 
    47123 > volume #12.10 color black transparency 0.8
    47124 
    47125 > volume zone #12.10 nearAtoms #14.10/a:2058-2064,2499-2506,2447,2450,2451 &
    47126 > sideonly range 2
    47127 
    47128 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d10_J53_c0.png
    47129 > height 600 width 600 supersample 3
    47130 
    47131 > hide #!14.10 models
    47132 
    47133 > hide #!12.10 models
    47134 
    47135 > show #!14.1 models
    47136 
    47137 > show #!12.1 models
    47138 
    47139 > volume #12.1 level 0.5
    47140 
    47141 > hide #14.1
    47142 
    47143 > color #14.1/Y maroon
    47144 
    47145 > color #14.1/Z rebecca purple
    47146 
    47147 > color #14.1/a:2058-2064 cornflower blue
    47148 
    47149 > color #14.1/a:2447-2451 gold
    47150 
    47151 > color #14.1/a:2499-2506 green yellow
    47152 
    47153 > color #14.1/a:2499-2506 green yellow target c
    47154 
    47155 > ~show #14.1
    47156 
    47157 > ~hbonds #14.1
    47158 
    47159 > name to_show
    47160 > #14.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47161 
    47162 > show to_show
    47163 
    47164 > ~cartoon #14.1
    47165 
    47166 > cartoon #14.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47167 
    47168 > transparency #14.1 60 target c
    47169 
    47170 > volume #12.1 color black transparency 0.8
    47171 
    47172 > volume zone #12.1 nearAtoms #14.1/a:2058-2064,2499-2506,2447,2450,2451 &
    47173 > sideonly range 2
    47174 
    47175 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d10_J54_c1.png
    47176 > height 600 width 600 supersample 3
    47177 
    47178 > hide #!14.1 models
    47179 
    47180 > hide #!12.1 models
    47181 
    47182 > show #!14.2 models
    47183 
    47184 > show #!12.2 models
    47185 
    47186 > volume #12.2 level 0.5
    47187 
    47188 > hide #14.2
    47189 
    47190 > color #14.2/Y maroon
    47191 
    47192 > color #14.2/Z rebecca purple
    47193 
    47194 > color #14.2/a:2058-2064 cornflower blue
    47195 
    47196 > color #14.2/a:2447-2451 gold
    47197 
    47198 > color #14.2/a:2499-2506 green yellow
    47199 
    47200 > color #14.2/a:2499-2506 green yellow target c
    47201 
    47202 > ~show #14.2
    47203 
    47204 > ~hbonds #14.2
    47205 
    47206 > name to_show
    47207 > #14.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47208 
    47209 > show to_show
    47210 
    47211 > ~cartoon #14.2
    47212 
    47213 > cartoon #14.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47214 
    47215 > transparency #14.2 60 target c
    47216 
    47217 > volume #12.2 color black transparency 0.8
    47218 
    47219 > volume zone #12.2 nearAtoms #14.2/a:2058-2064,2499-2506,2447,2450,2451 &
    47220 > sideonly range 2
    47221 
    47222 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d10_J55_c2.png
    47223 > height 600 width 600 supersample 3
    47224 
    47225 > hide #!14.2 models
    47226 
    47227 > hide #!12.2 models
    47228 
    47229 > show #!14.3 models
    47230 
    47231 > show #!12.3 models
    47232 
    47233 > volume #12.3 level 0.5
    47234 
    47235 > hide #14.3
    47236 
    47237 > color #14.3/Y maroon
    47238 
    47239 > color #14.3/Z rebecca purple
    47240 
    47241 > color #14.3/a:2058-2064 cornflower blue
    47242 
    47243 > color #14.3/a:2447-2451 gold
    47244 
    47245 > color #14.3/a:2499-2506 green yellow
    47246 
    47247 > color #14.3/a:2499-2506 green yellow target c
    47248 
    47249 > ~show #14.3
    47250 
    47251 > ~hbonds #14.3
    47252 
    47253 > name to_show
    47254 > #14.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47255 
    47256 > show to_show
    47257 
    47258 > ~cartoon #14.3
    47259 
    47260 > cartoon #14.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47261 
    47262 > transparency #14.3 60 target c
    47263 
    47264 > volume #12.3 color black transparency 0.8
    47265 
    47266 > volume zone #12.3 nearAtoms #14.3/a:2058-2064,2499-2506,2447,2450,2451 &
    47267 > sideonly range 2
    47268 
    47269 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d10_J56_c3.png
    47270 > height 600 width 600 supersample 3
    47271 
    47272 > hide #!14.3 models
    47273 
    47274 > hide #!12.3 models
    47275 
    47276 > show #!14.4 models
    47277 
    47278 > show #!12.4 models
    47279 
    47280 > volume #12.4 level 0.5
    47281 
    47282 > hide #14.4
    47283 
    47284 > color #14.4/Y maroon
    47285 
    47286 > color #14.4/Z rebecca purple
    47287 
    47288 > color #14.4/a:2058-2064 cornflower blue
    47289 
    47290 > color #14.4/a:2447-2451 gold
    47291 
    47292 > color #14.4/a:2499-2506 green yellow
    47293 
    47294 > color #14.4/a:2499-2506 green yellow target c
    47295 
    47296 > ~show #14.4
    47297 
    47298 > ~hbonds #14.4
    47299 
    47300 > name to_show
    47301 > #14.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47302 
    47303 > show to_show
    47304 
    47305 > ~cartoon #14.4
    47306 
    47307 > cartoon #14.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47308 
    47309 > transparency #14.4 60 target c
    47310 
    47311 > volume #12.4 color black transparency 0.8
    47312 
    47313 > volume zone #12.4 nearAtoms #14.4/a:2058-2064,2499-2506,2447,2450,2451 &
    47314 > sideonly range 2
    47315 
    47316 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d10_J57_c4.png
    47317 > height 600 width 600 supersample 3
    47318 
    47319 > hide #!14.4 models
    47320 
    47321 > hide #!12.4 models
    47322 
    47323 > show #!14.5 models
    47324 
    47325 > show #!12.5 models
    47326 
    47327 > volume #12.5 level 0.5
    47328 
    47329 > hide #14.5
    47330 
    47331 > color #14.5/Y maroon
    47332 
    47333 > color #14.5/Z rebecca purple
    47334 
    47335 > color #14.5/a:2058-2064 cornflower blue
    47336 
    47337 > color #14.5/a:2447-2451 gold
    47338 
    47339 > color #14.5/a:2499-2506 green yellow
    47340 
    47341 > color #14.5/a:2499-2506 green yellow target c
    47342 
    47343 > ~show #14.5
    47344 
    47345 > ~hbonds #14.5
    47346 
    47347 > name to_show
    47348 > #14.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47349 
    47350 > show to_show
    47351 
    47352 > ~cartoon #14.5
    47353 
    47354 > cartoon #14.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47355 
    47356 > transparency #14.5 60 target c
    47357 
    47358 > volume #12.5 color black transparency 0.8
    47359 
    47360 > volume zone #12.5 nearAtoms #14.5/a:2058-2064,2499-2506,2447,2450,2451 &
    47361 > sideonly range 2
    47362 
    47363 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d10_J58_c5.png
    47364 > height 600 width 600 supersample 3
    47365 
    47366 > hide #!14.5 models
    47367 
    47368 > hide #!12.5 models
    47369 
    47370 > show #!14.6 models
    47371 
    47372 > show #!12.6 models
    47373 
    47374 > volume #12.6 level 0.5
    47375 
    47376 > hide #14.6
    47377 
    47378 > color #14.6/Y maroon
    47379 
    47380 > color #14.6/Z rebecca purple
    47381 
    47382 > color #14.6/a:2058-2064 cornflower blue
    47383 
    47384 > color #14.6/a:2447-2451 gold
    47385 
    47386 > color #14.6/a:2499-2506 green yellow
    47387 
    47388 > color #14.6/a:2499-2506 green yellow target c
    47389 
    47390 > ~show #14.6
    47391 
    47392 > ~hbonds #14.6
    47393 
    47394 > name to_show
    47395 > #14.6/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47396 
    47397 > show to_show
    47398 
    47399 > ~cartoon #14.6
    47400 
    47401 > cartoon #14.6/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47402 
    47403 > transparency #14.6 60 target c
    47404 
    47405 > volume #12.6 color black transparency 0.8
    47406 
    47407 > volume zone #12.6 nearAtoms #14.6/a:2058-2064,2499-2506,2447,2450,2451 &
    47408 > sideonly range 2
    47409 
    47410 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d10_J59_c6.png
    47411 > height 600 width 600 supersample 3
    47412 
    47413 > hide #!14.6 models
    47414 
    47415 > hide #!12.6 models
    47416 
    47417 > show #!14.7 models
    47418 
    47419 > show #!12.7 models
    47420 
    47421 > volume #12.7 level 0.5
    47422 
    47423 > hide #14.7
    47424 
    47425 > color #14.7/Y maroon
    47426 
    47427 > color #14.7/Z rebecca purple
    47428 
    47429 > color #14.7/a:2058-2064 cornflower blue
    47430 
    47431 > color #14.7/a:2447-2451 gold
    47432 
    47433 > color #14.7/a:2499-2506 green yellow
    47434 
    47435 > color #14.7/a:2499-2506 green yellow target c
    47436 
    47437 > ~show #14.7
    47438 
    47439 > ~hbonds #14.7
    47440 
    47441 > name to_show
    47442 > #14.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47443 
    47444 > show to_show
    47445 
    47446 > ~cartoon #14.7
    47447 
    47448 > cartoon #14.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47449 
    47450 > transparency #14.7 60 target c
    47451 
    47452 > volume #12.7 color black transparency 0.8
    47453 
    47454 > volume zone #12.7 nearAtoms #14.7/a:2058-2064,2499-2506,2447,2450,2451 &
    47455 > sideonly range 2
    47456 
    47457 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d10_J60_c7.png
    47458 > height 600 width 600 supersample 3
    47459 
    47460 > hide #!14.7 models
    47461 
    47462 > hide #!12.7 models
    47463 
    47464 > show #!14.8 models
    47465 
    47466 > show #!12.8 models
    47467 
    47468 > volume #12.8 level 0.5
    47469 
    47470 > hide #14.8
    47471 
    47472 > color #14.8/Y maroon
    47473 
    47474 > color #14.8/Z rebecca purple
    47475 
    47476 > color #14.8/a:2058-2064 cornflower blue
    47477 
    47478 > color #14.8/a:2447-2451 gold
    47479 
    47480 > color #14.8/a:2499-2506 green yellow
    47481 
    47482 > color #14.8/a:2499-2506 green yellow target c
    47483 
    47484 > ~show #14.8
    47485 
    47486 > ~hbonds #14.8
    47487 
    47488 > name to_show
    47489 > #14.8/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47490 
    47491 > show to_show
    47492 
    47493 > ~cartoon #14.8
    47494 
    47495 > cartoon #14.8/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47496 
    47497 > transparency #14.8 60 target c
    47498 
    47499 > volume #12.8 color black transparency 0.8
    47500 
    47501 > volume zone #12.8 nearAtoms #14.8/a:2058-2064,2499-2506,2447,2450,2451 &
    47502 > sideonly range 2
    47503 
    47504 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d10_J61_c8.png
    47505 > height 600 width 600 supersample 3
    47506 
    47507 > hide #!14.8 models
    47508 
    47509 > hide #!12.8 models
    47510 
    47511 > show #!14.9 models
    47512 
    47513 > show #!12.9 models
    47514 
    47515 > volume #12.9 level 0.5
    47516 
    47517 > hide #14.9
    47518 
    47519 > color #14.9/Y maroon
    47520 
    47521 > color #14.9/Z rebecca purple
    47522 
    47523 > color #14.9/a:2058-2064 cornflower blue
    47524 
    47525 > color #14.9/a:2447-2451 gold
    47526 
    47527 > color #14.9/a:2499-2506 green yellow
    47528 
    47529 > color #14.9/a:2499-2506 green yellow target c
    47530 
    47531 > ~show #14.9
    47532 
    47533 > ~hbonds #14.9
    47534 
    47535 > name to_show
    47536 > #14.9/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47537 
    47538 > show to_show
    47539 
    47540 > ~cartoon #14.9
    47541 
    47542 > cartoon #14.9/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47543 
    47544 > transparency #14.9 60 target c
    47545 
    47546 > volume #12.9 color black transparency 0.8
    47547 
    47548 > volume zone #12.9 nearAtoms #14.9/a:2058-2064,2499-2506,2447,2450,2451 &
    47549 > sideonly range 2
    47550 
    47551 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_d10_J62_c9.png
    47552 > height 600 width 600 supersample 3
    47553 
    47554 > hide #!14.9 models
    47555 
    47556 > hide #!12.9 models
    47557 
    47558 > show #!22.1 models
    47559 
    47560 > show #!21.1 models
    47561 
    47562 > volume #21.1 level 0.4
    47563 
    47564 > hide #22.1
    47565 
    47566 > color #22.1/Y maroon
    47567 
    47568 > color #22.1/Z rebecca purple
    47569 
    47570 > color #22.1/a:2058-2064 cornflower blue
    47571 
    47572 > color #22.1/a:2447-2451 gold
    47573 
    47574 > color #22.1/a:2499-2506 green yellow
    47575 
    47576 > color #22.1/a:2499-2506 green yellow target c
    47577 
    47578 > ~show #22.1
    47579 
    47580 > ~hbonds #22.1
    47581 
    47582 > name to_show
    47583 > #22.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47584 
    47585 > show to_show
    47586 
    47587 > ~cartoon #22.1
    47588 
    47589 > cartoon #22.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47590 
    47591 > transparency #22.1 60 target c
    47592 
    47593 > volume #21.1 color black transparency 0.8
    47594 
    47595 > volume zone #21.1 nearAtoms #22.1/a:2058-2064,2499-2506,2447,2450,2451 &
    47596 > sideonly range 2
    47597 
    47598 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J111_ape.png
    47599 > height 600 width 600 supersample 3
    47600 
    47601 > hide #!22.1 models
    47602 
    47603 > hide #!21.1 models
    47604 
    47605 > show #!22.2 models
    47606 
    47607 > show #!21.2 models
    47608 
    47609 > volume #21.2 level 0.4
    47610 
    47611 > hide #22.2
    47612 
    47613 > color #22.2/Y maroon
    47614 
    47615 > color #22.2/Z rebecca purple
    47616 
    47617 > color #22.2/a:2058-2064 cornflower blue
    47618 
    47619 > color #22.2/a:2447-2451 gold
    47620 
    47621 > color #22.2/a:2499-2506 green yellow
    47622 
    47623 > color #22.2/a:2499-2506 green yellow target c
    47624 
    47625 > ~show #22.2
    47626 
    47627 > ~hbonds #22.2
    47628 
    47629 > name to_show
    47630 > #22.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47631 
    47632 > show to_show
    47633 
    47634 > ~cartoon #22.2
    47635 
    47636 > cartoon #22.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47637 
    47638 > transparency #22.2 60 target c
    47639 
    47640 > volume #21.2 color black transparency 0.8
    47641 
    47642 > volume zone #21.2 nearAtoms #22.2/a:2058-2064,2499-2506,2447,2450,2451 &
    47643 > sideonly range 2
    47644 
    47645 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J112_ap.png
    47646 > height 600 width 600 supersample 3
    47647 
    47648 > hide #!22.2 models
    47649 
    47650 > hide #!21.2 models
    47651 
    47652 > show #!22.3 models
    47653 
    47654 > show #!21.3 models
    47655 
    47656 > volume #21.3 level 0.4
    47657 
    47658 > hide #22.3
    47659 
    47660 > color #22.3/Y maroon
    47661 
    47662 > color #22.3/Z rebecca purple
    47663 
    47664 > color #22.3/a:2058-2064 cornflower blue
    47665 
    47666 > color #22.3/a:2447-2451 gold
    47667 
    47668 > color #22.3/a:2499-2506 green yellow
    47669 
    47670 > color #22.3/a:2499-2506 green yellow target c
    47671 
    47672 > ~show #22.3
    47673 
    47674 > ~hbonds #22.3
    47675 
    47676 > name to_show
    47677 > #22.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47678 
    47679 > show to_show
    47680 
    47681 > ~cartoon #22.3
    47682 
    47683 > cartoon #22.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47684 
    47685 > transparency #22.3 60 target c
    47686 
    47687 > volume #21.3 color black transparency 0.8
    47688 
    47689 > volume zone #21.3 nearAtoms #22.3/a:2058-2064,2499-2506,2447,2450,2451 &
    47690 > sideonly range 2
    47691 
    47692 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J113_pe.png
    47693 > height 600 width 600 supersample 3
    47694 
    47695 > hide #!22.3 models
    47696 
    47697 > hide #!21.3 models
    47698 
    47699 > show #!22.4 models
    47700 
    47701 > show #!21.4 models
    47702 
    47703 > volume #21.4 level 0.4
    47704 
    47705 > hide #22.4
    47706 
    47707 > color #22.4/Y maroon
    47708 
    47709 > color #22.4/Z rebecca purple
    47710 
    47711 > color #22.4/a:2058-2064 cornflower blue
    47712 
    47713 > color #22.4/a:2447-2451 gold
    47714 
    47715 > color #22.4/a:2499-2506 green yellow
    47716 
    47717 > color #22.4/a:2499-2506 green yellow target c
    47718 
    47719 > ~show #22.4
    47720 
    47721 > ~hbonds #22.4
    47722 
    47723 > name to_show
    47724 > #22.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47725 
    47726 > show to_show
    47727 
    47728 > ~cartoon #22.4
    47729 
    47730 > cartoon #22.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47731 
    47732 > transparency #22.4 60 target c
    47733 
    47734 > volume #21.4 color black transparency 0.8
    47735 
    47736 > volume zone #21.4 nearAtoms #22.4/a:2058-2064,2499-2506,2447,2450,2451 &
    47737 > sideonly range 2
    47738 
    47739 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J124_e.png
    47740 > height 600 width 600 supersample 3
    47741 
    47742 > hide #!22.4 models
    47743 
    47744 > hide #!21.4 models
    47745 
    47746 > show #!25.10 models
    47747 
    47748 > show #!23.10 models
    47749 
    47750 > volume #23.10 level 0.1
    47751 
    47752 > hide #25.10
    47753 
    47754 > color #25.10/Y maroon
    47755 
    47756 > color #25.10/Z rebecca purple
    47757 
    47758 > color #25.10/a:2058-2064 cornflower blue
    47759 
    47760 > color #25.10/a:2447-2451 gold
    47761 
    47762 > color #25.10/a:2499-2506 green yellow
    47763 
    47764 > color #25.10/a:2499-2506 green yellow target c
    47765 
    47766 > ~show #25.10
    47767 
    47768 > ~hbonds #25.10
    47769 
    47770 > name to_show
    47771 > #25.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47772 
    47773 > show to_show
    47774 
    47775 > ~cartoon #25.10
    47776 
    47777 > cartoon #25.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47778 
    47779 > transparency #25.10 60 target c
    47780 
    47781 > volume #23.10 color black transparency 0.8
    47782 
    47783 > volume zone #23.10 nearAtoms #25.10/a:2058-2064,2499-2506,2447,2450,2451 &
    47784 > sideonly range 2
    47785 
    47786 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J239_c0.png
    47787 > height 600 width 600 supersample 3
    47788 
    47789 > hide #!25.10 models
    47790 
    47791 > hide #!23.10 models
    47792 
    47793 > show #!25.1 models
    47794 
    47795 > show #!23.1 models
    47796 
    47797 > volume #23.1 level 0.1
    47798 
    47799 > hide #25.1
    47800 
    47801 > color #25.1/Y maroon
    47802 
    47803 > color #25.1/Z rebecca purple
    47804 
    47805 > color #25.1/a:2058-2064 cornflower blue
    47806 
    47807 > color #25.1/a:2447-2451 gold
    47808 
    47809 > color #25.1/a:2499-2506 green yellow
    47810 
    47811 > color #25.1/a:2499-2506 green yellow target c
    47812 
    47813 > ~show #25.1
    47814 
    47815 > ~hbonds #25.1
    47816 
    47817 > name to_show
    47818 > #25.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47819 
    47820 > show to_show
    47821 
    47822 > ~cartoon #25.1
    47823 
    47824 > cartoon #25.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47825 
    47826 > transparency #25.1 60 target c
    47827 
    47828 > volume #23.1 color black transparency 0.8
    47829 
    47830 > volume zone #23.1 nearAtoms #25.1/a:2058-2064,2499-2506,2447,2450,2451 &
    47831 > sideonly range 2
    47832 
    47833 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J240_c1.png
    47834 > height 600 width 600 supersample 3
    47835 
    47836 > hide #!25.1 models
    47837 
    47838 > hide #!23.1 models
    47839 
    47840 > show #!25.2 models
    47841 
    47842 > show #!23.2 models
    47843 
    47844 > volume #23.2 level 0.1
    47845 
    47846 > hide #25.2
    47847 
    47848 > color #25.2/Y maroon
    47849 
    47850 > color #25.2/Z rebecca purple
    47851 
    47852 > color #25.2/a:2058-2064 cornflower blue
    47853 
    47854 > color #25.2/a:2447-2451 gold
    47855 
    47856 > color #25.2/a:2499-2506 green yellow
    47857 
    47858 > color #25.2/a:2499-2506 green yellow target c
    47859 
    47860 > ~show #25.2
    47861 
    47862 > ~hbonds #25.2
    47863 
    47864 > name to_show
    47865 > #25.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47866 
    47867 > show to_show
    47868 
    47869 > ~cartoon #25.2
    47870 
    47871 > cartoon #25.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47872 
    47873 > transparency #25.2 60 target c
    47874 
    47875 > volume #23.2 color black transparency 0.8
    47876 
    47877 > volume zone #23.2 nearAtoms #25.2/a:2058-2064,2499-2506,2447,2450,2451 &
    47878 > sideonly range 2
    47879 
    47880 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J241_c2.png
    47881 > height 600 width 600 supersample 3
    47882 
    47883 > hide #!25.2 models
    47884 
    47885 > hide #!23.2 models
    47886 
    47887 > show #!25.3 models
    47888 
    47889 > show #!23.3 models
    47890 
    47891 > volume #23.3 level 0.1
    47892 
    47893 > hide #25.3
    47894 
    47895 > color #25.3/Y maroon
    47896 
    47897 > color #25.3/Z rebecca purple
    47898 
    47899 > color #25.3/a:2058-2064 cornflower blue
    47900 
    47901 > color #25.3/a:2447-2451 gold
    47902 
    47903 > color #25.3/a:2499-2506 green yellow
    47904 
    47905 > color #25.3/a:2499-2506 green yellow target c
    47906 
    47907 > ~show #25.3
    47908 
    47909 > ~hbonds #25.3
    47910 
    47911 > name to_show
    47912 > #25.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47913 
    47914 > show to_show
    47915 
    47916 > ~cartoon #25.3
    47917 
    47918 > cartoon #25.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47919 
    47920 > transparency #25.3 60 target c
    47921 
    47922 > volume #23.3 color black transparency 0.8
    47923 
    47924 > volume zone #23.3 nearAtoms #25.3/a:2058-2064,2499-2506,2447,2450,2451 &
    47925 > sideonly range 2
    47926 
    47927 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J242_c3.png
    47928 > height 600 width 600 supersample 3
    47929 
    47930 > hide #!25.3 models
    47931 
    47932 > hide #!23.3 models
    47933 
    47934 > show #!25.4 models
    47935 
    47936 > show #!23.4 models
    47937 
    47938 > volume #23.4 level 0.1
    47939 
    47940 > hide #25.4
    47941 
    47942 > color #25.4/Y maroon
    47943 
    47944 > color #25.4/Z rebecca purple
    47945 
    47946 > color #25.4/a:2058-2064 cornflower blue
    47947 
    47948 > color #25.4/a:2447-2451 gold
    47949 
    47950 > color #25.4/a:2499-2506 green yellow
    47951 
    47952 > color #25.4/a:2499-2506 green yellow target c
    47953 
    47954 > ~show #25.4
    47955 
    47956 > ~hbonds #25.4
    47957 
    47958 > name to_show
    47959 > #25.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    47960 
    47961 > show to_show
    47962 
    47963 > ~cartoon #25.4
    47964 
    47965 > cartoon #25.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    47966 
    47967 > transparency #25.4 60 target c
    47968 
    47969 > volume #23.4 color black transparency 0.8
    47970 
    47971 > volume zone #23.4 nearAtoms #25.4/a:2058-2064,2499-2506,2447,2450,2451 &
    47972 > sideonly range 2
    47973 
    47974 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J243_c4.png
    47975 > height 600 width 600 supersample 3
    47976 
    47977 > hide #!25.4 models
    47978 
    47979 > hide #!23.4 models
    47980 
    47981 > show #!25.5 models
    47982 
    47983 > show #!23.5 models
    47984 
    47985 > volume #23.5 level 0.1
    47986 
    47987 > hide #25.5
    47988 
    47989 > color #25.5/Y maroon
    47990 
    47991 > color #25.5/Z rebecca purple
    47992 
    47993 > color #25.5/a:2058-2064 cornflower blue
    47994 
    47995 > color #25.5/a:2447-2451 gold
    47996 
    47997 > color #25.5/a:2499-2506 green yellow
    47998 
    47999 > color #25.5/a:2499-2506 green yellow target c
    48000 
    48001 > ~show #25.5
    48002 
    48003 > ~hbonds #25.5
    48004 
    48005 > name to_show
    48006 > #25.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    48007 
    48008 > show to_show
    48009 
    48010 > ~cartoon #25.5
    48011 
    48012 > cartoon #25.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    48013 
    48014 > transparency #25.5 60 target c
    48015 
    48016 > volume #23.5 color black transparency 0.8
    48017 
    48018 > volume zone #23.5 nearAtoms #25.5/a:2058-2064,2499-2506,2447,2450,2451 &
    48019 > sideonly range 2
    48020 
    48021 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J244_c5.png
    48022 > height 600 width 600 supersample 3
    48023 
    48024 > hide #!25.5 models
    48025 
    48026 > hide #!23.5 models
    48027 
    48028 > show #!25.6 models
    48029 
    48030 > show #!23.6 models
    48031 
    48032 > volume #23.6 level 0.1
    48033 
    48034 > hide #25.6
    48035 
    48036 > color #25.6/Y maroon
    48037 
    48038 > color #25.6/Z rebecca purple
    48039 
    48040 > color #25.6/a:2058-2064 cornflower blue
    48041 
    48042 > color #25.6/a:2447-2451 gold
    48043 
    48044 > color #25.6/a:2499-2506 green yellow
    48045 
    48046 > color #25.6/a:2499-2506 green yellow target c
    48047 
    48048 > ~show #25.6
    48049 
    48050 > ~hbonds #25.6
    48051 
    48052 > name to_show
    48053 > #25.6/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    48054 
    48055 > show to_show
    48056 
    48057 > ~cartoon #25.6
    48058 
    48059 > cartoon #25.6/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    48060 
    48061 > transparency #25.6 60 target c
    48062 
    48063 > volume #23.6 color black transparency 0.8
    48064 
    48065 > volume zone #23.6 nearAtoms #25.6/a:2058-2064,2499-2506,2447,2450,2451 &
    48066 > sideonly range 2
    48067 
    48068 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J245_c6.png
    48069 > height 600 width 600 supersample 3
    48070 
    48071 > hide #!25.6 models
    48072 
    48073 > hide #!23.6 models
    48074 
    48075 > show #!25.7 models
    48076 
    48077 > show #!23.7 models
    48078 
    48079 > volume #23.7 level 0.1
    48080 
    48081 > hide #25.7
    48082 
    48083 > color #25.7/Y maroon
    48084 
    48085 > color #25.7/Z rebecca purple
    48086 
    48087 > color #25.7/a:2058-2064 cornflower blue
    48088 
    48089 > color #25.7/a:2447-2451 gold
    48090 
    48091 > color #25.7/a:2499-2506 green yellow
    48092 
    48093 > color #25.7/a:2499-2506 green yellow target c
    48094 
    48095 > ~show #25.7
    48096 
    48097 > ~hbonds #25.7
    48098 
    48099 > name to_show
    48100 > #25.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    48101 
    48102 > show to_show
    48103 
    48104 > ~cartoon #25.7
    48105 
    48106 > cartoon #25.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    48107 
    48108 > transparency #25.7 60 target c
    48109 
    48110 > volume #23.7 color black transparency 0.8
    48111 
    48112 > volume zone #23.7 nearAtoms #25.7/a:2058-2064,2499-2506,2447,2450,2451 &
    48113 > sideonly range 2
    48114 
    48115 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J246_c7.png
    48116 > height 600 width 600 supersample 3
    48117 
    48118 > hide #!25.7 models
    48119 
    48120 > hide #!23.7 models
    48121 
    48122 > show #!25.8 models
    48123 
    48124 > show #!23.8 models
    48125 
    48126 > volume #23.8 level 0.1
    48127 
    48128 > hide #25.8
    48129 
    48130 > color #25.8/Y maroon
    48131 
    48132 > color #25.8/Z rebecca purple
    48133 
    48134 > color #25.8/a:2058-2064 cornflower blue
    48135 
    48136 > color #25.8/a:2447-2451 gold
    48137 
    48138 > color #25.8/a:2499-2506 green yellow
    48139 
    48140 > color #25.8/a:2499-2506 green yellow target c
    48141 
    48142 > ~show #25.8
    48143 
    48144 > ~hbonds #25.8
    48145 
    48146 > name to_show
    48147 > #25.8/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    48148 
    48149 > show to_show
    48150 
    48151 > ~cartoon #25.8
    48152 
    48153 > cartoon #25.8/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    48154 
    48155 > transparency #25.8 60 target c
    48156 
    48157 > volume #23.8 color black transparency 0.8
    48158 
    48159 > volume zone #23.8 nearAtoms #25.8/a:2058-2064,2499-2506,2447,2450,2451 &
    48160 > sideonly range 2
    48161 
    48162 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J247_c8.png
    48163 > height 600 width 600 supersample 3
    48164 
    48165 > hide #!25.8 models
    48166 
    48167 > hide #!23.8 models
    48168 
    48169 > show #!25.9 models
    48170 
    48171 > show #!23.9 models
    48172 
    48173 > volume #23.9 level 0.1
    48174 
    48175 > hide #25.9
    48176 
    48177 > color #25.9/Y maroon
    48178 
    48179 > color #25.9/Z rebecca purple
    48180 
    48181 > color #25.9/a:2058-2064 cornflower blue
    48182 
    48183 > color #25.9/a:2447-2451 gold
    48184 
    48185 > color #25.9/a:2499-2506 green yellow
    48186 
    48187 > color #25.9/a:2499-2506 green yellow target c
    48188 
    48189 > ~show #25.9
    48190 
    48191 > ~hbonds #25.9
    48192 
    48193 > name to_show
    48194 > #25.9/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    48195 
    48196 > show to_show
    48197 
    48198 > ~cartoon #25.9
    48199 
    48200 > cartoon #25.9/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    48201 
    48202 > transparency #25.9 60 target c
    48203 
    48204 > volume #23.9 color black transparency 0.8
    48205 
    48206 > volume zone #23.9 nearAtoms #25.9/a:2058-2064,2499-2506,2447,2450,2451 &
    48207 > sideonly range 2
    48208 
    48209 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J248_c9.png
    48210 > height 600 width 600 supersample 3
    48211 
    48212 > hide #!25.9 models
    48213 
    48214 > hide #!23.9 models
    48215 
    48216 > close #25.1-10
    48217 
    48218 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48219 > PTC/dEc0-J239-coot-3-self-restr.pdb id 25.10 name dE_J239_c0
    48220 
    48221 Summary of feedback from opening
    48222 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48223 PTC/dEc0-J239-coot-3-self-restr.pdb 
    48224 --- 
    48225 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    48226 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    48227 6 
    48228 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    48229 8 
    48230 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    48231 23 
    48232 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    48233 13 
    48234 320 messages similar to the above omitted 
    48235 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    48236 -1 N LEU l 102 O LEU l 33 
    48237 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    48238 0 
    48239 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    48240 -1 N LYS l 133 O SER l 30 
    48241 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    48242 0 
    48243 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    48244 115 -1 N ILE m 113 O ILE m 34 
    48245 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    48246 103 -1 N CYS m 100 O MET m 110 
    48247 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    48248 0 
    48249 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    48250 -1 N VAL n 39 O VAL n 49 
    48251 55 messages similar to the above omitted 
    48252 Cannot find LINK/SSBOND residue ZN (101 ) 
    48253 Cannot find LINK/SSBOND residue ZN (101 ) 
    48254 Cannot find LINK/SSBOND residue ZN (101 ) 
    48255 Cannot find LINK/SSBOND residue ZN (101 ) 
    48256  
    48257 Chain information for dE_J239_c0 #7 
    48258 --- 
    48259 Chain | Description 
    48260 3 | No description available 
    48261 Y | No description available 
    48262 Z | No description available 
    48263 a | No description available 
    48264 b | No description available 
    48265 c | No description available 
    48266 e | No description available 
    48267 l | No description available 
    48268 v | No description available 
    48269  
    48270 
    48271 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48272 > PTC/dEc1-J240-coot-3-self-restr.pdb id 25.1 name dE_J240_c1
    48273 
    48274 Summary of feedback from opening
    48275 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48276 PTC/dEc1-J240-coot-3-self-restr.pdb 
    48277 --- 
    48278 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    48279 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    48280 6 
    48281 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    48282 8 
    48283 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    48284 23 
    48285 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    48286 13 
    48287 320 messages similar to the above omitted 
    48288 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    48289 -1 N LEU l 102 O LEU l 33 
    48290 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    48291 0 
    48292 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    48293 -1 N LYS l 133 O SER l 30 
    48294 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    48295 0 
    48296 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    48297 115 -1 N ILE m 113 O ILE m 34 
    48298 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    48299 103 -1 N CYS m 100 O MET m 110 
    48300 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    48301 0 
    48302 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    48303 -1 N VAL n 39 O VAL n 49 
    48304 55 messages similar to the above omitted 
    48305 Cannot find LINK/SSBOND residue ZN (101 ) 
    48306 Cannot find LINK/SSBOND residue ZN (101 ) 
    48307 Cannot find LINK/SSBOND residue ZN (101 ) 
    48308 Cannot find LINK/SSBOND residue ZN (101 ) 
    48309  
    48310 Chain information for dE_J240_c1 #7 
    48311 --- 
    48312 Chain | Description 
    48313 3 | No description available 
    48314 Y | No description available 
    48315 Z | No description available 
    48316 a | No description available 
    48317 b | No description available 
    48318 c | No description available 
    48319 e | No description available 
    48320 l | No description available 
    48321 v | No description available 
    48322  
    48323 
    48324 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48325 > PTC/dEc2-J241-coot-3-self-restr.pdb id 25.2 name dE_J241_c2
    48326 
    48327 Summary of feedback from opening
    48328 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48329 PTC/dEc2-J241-coot-3-self-restr.pdb 
    48330 --- 
    48331 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    48332 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    48333 6 
    48334 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    48335 8 
    48336 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    48337 23 
    48338 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    48339 13 
    48340 320 messages similar to the above omitted 
    48341 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    48342 -1 N LEU l 102 O LEU l 33 
    48343 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    48344 0 
    48345 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    48346 -1 N LYS l 133 O SER l 30 
    48347 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    48348 0 
    48349 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    48350 115 -1 N ILE m 113 O ILE m 34 
    48351 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    48352 103 -1 N CYS m 100 O MET m 110 
    48353 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    48354 0 
    48355 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    48356 -1 N VAL n 39 O VAL n 49 
    48357 55 messages similar to the above omitted 
    48358 Cannot find LINK/SSBOND residue ZN (101 ) 
    48359 Cannot find LINK/SSBOND residue ZN (101 ) 
    48360 Cannot find LINK/SSBOND residue ZN (101 ) 
    48361 Cannot find LINK/SSBOND residue ZN (101 ) 
    48362  
    48363 Chain information for dE_J241_c2 #7 
    48364 --- 
    48365 Chain | Description 
    48366 3 | No description available 
    48367 Y | No description available 
    48368 Z | No description available 
    48369 a | No description available 
    48370 b | No description available 
    48371 c | No description available 
    48372 e | No description available 
    48373 l | No description available 
    48374 v | No description available 
    48375  
    48376 
    48377 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48378 > PTC/dEc3-J242-coot-3-self-restr.pdb id 25.3 name dE_J242_c3
    48379 
    48380 Summary of feedback from opening
    48381 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48382 PTC/dEc3-J242-coot-3-self-restr.pdb 
    48383 --- 
    48384 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    48385 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    48386 6 
    48387 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    48388 8 
    48389 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    48390 23 
    48391 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    48392 13 
    48393 320 messages similar to the above omitted 
    48394 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    48395 -1 N LEU l 102 O LEU l 33 
    48396 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    48397 0 
    48398 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    48399 -1 N LYS l 133 O SER l 30 
    48400 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    48401 0 
    48402 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    48403 115 -1 N ILE m 113 O ILE m 34 
    48404 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    48405 103 -1 N CYS m 100 O MET m 110 
    48406 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    48407 0 
    48408 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    48409 -1 N VAL n 39 O VAL n 49 
    48410 55 messages similar to the above omitted 
    48411 Cannot find LINK/SSBOND residue ZN (101 ) 
    48412 Cannot find LINK/SSBOND residue ZN (101 ) 
    48413 Cannot find LINK/SSBOND residue ZN (101 ) 
    48414 Cannot find LINK/SSBOND residue ZN (101 ) 
    48415  
    48416 Chain information for dE_J242_c3 #7 
    48417 --- 
    48418 Chain | Description 
    48419 3 | No description available 
    48420 Z | No description available 
    48421 a | No description available 
    48422 b | No description available 
    48423 c | No description available 
    48424 e | No description available 
    48425 l | No description available 
    48426 v | No description available 
    48427  
    48428 
    48429 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48430 > PTC/dEc4-J243-coot-3-self-restr.pdb id 25.4 name dE_J243_c4
    48431 
    48432 Summary of feedback from opening
    48433 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48434 PTC/dEc4-J243-coot-3-self-restr.pdb 
    48435 --- 
    48436 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    48437 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    48438 6 
    48439 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    48440 8 
    48441 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    48442 23 
    48443 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    48444 13 
    48445 320 messages similar to the above omitted 
    48446 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    48447 -1 N LEU l 102 O LEU l 33 
    48448 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    48449 0 
    48450 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    48451 -1 N LYS l 133 O SER l 30 
    48452 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    48453 0 
    48454 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    48455 115 -1 N ILE m 113 O ILE m 34 
    48456 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    48457 103 -1 N CYS m 100 O MET m 110 
    48458 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    48459 0 
    48460 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    48461 -1 N VAL n 39 O VAL n 49 
    48462 55 messages similar to the above omitted 
    48463 Cannot find LINK/SSBOND residue ZN (101 ) 
    48464 Cannot find LINK/SSBOND residue ZN (101 ) 
    48465 Cannot find LINK/SSBOND residue ZN (101 ) 
    48466 Cannot find LINK/SSBOND residue ZN (101 ) 
    48467  
    48468 Chain information for dE_J243_c4 #7 
    48469 --- 
    48470 Chain | Description 
    48471 3 | No description available 
    48472 Y | No description available 
    48473 Z | No description available 
    48474 a | No description available 
    48475 b | No description available 
    48476 c | No description available 
    48477 e | No description available 
    48478 l | No description available 
    48479 v | No description available 
    48480  
    48481 
    48482 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48483 > PTC/dEc5-J244-coot-3-self-restr.pdb id 25.5 name dE_J244_c5
    48484 
    48485 Summary of feedback from opening
    48486 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48487 PTC/dEc5-J244-coot-3-self-restr.pdb 
    48488 --- 
    48489 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    48490 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    48491 6 
    48492 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    48493 8 
    48494 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    48495 23 
    48496 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    48497 13 
    48498 320 messages similar to the above omitted 
    48499 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    48500 -1 N LEU l 102 O LEU l 33 
    48501 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    48502 0 
    48503 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    48504 -1 N LYS l 133 O SER l 30 
    48505 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    48506 0 
    48507 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    48508 115 -1 N ILE m 113 O ILE m 34 
    48509 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    48510 103 -1 N CYS m 100 O MET m 110 
    48511 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    48512 0 
    48513 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    48514 -1 N VAL n 39 O VAL n 49 
    48515 55 messages similar to the above omitted 
    48516 Cannot find LINK/SSBOND residue ZN (101 ) 
    48517 Cannot find LINK/SSBOND residue ZN (101 ) 
    48518 Cannot find LINK/SSBOND residue ZN (101 ) 
    48519 Cannot find LINK/SSBOND residue ZN (101 ) 
    48520  
    48521 Chain information for dE_J244_c5 #7 
    48522 --- 
    48523 Chain | Description 
    48524 3 | No description available 
    48525 Y | No description available 
    48526 Z | No description available 
    48527 a | No description available 
    48528 b | No description available 
    48529 c | No description available 
    48530 e | No description available 
    48531 l | No description available 
    48532 v | No description available 
    48533  
    48534 
    48535 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48536 > PTC/dEc6-J245-coot-3-self-restr.pdb id 25.6 name dE_J245_c6
    48537 
    48538 Summary of feedback from opening
    48539 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48540 PTC/dEc6-J245-coot-3-self-restr.pdb 
    48541 --- 
    48542 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    48543 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    48544 6 
    48545 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    48546 8 
    48547 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    48548 23 
    48549 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    48550 13 
    48551 320 messages similar to the above omitted 
    48552 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    48553 -1 N LEU l 102 O LEU l 33 
    48554 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    48555 0 
    48556 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    48557 -1 N LYS l 133 O SER l 30 
    48558 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    48559 0 
    48560 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    48561 115 -1 N ILE m 113 O ILE m 34 
    48562 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    48563 103 -1 N CYS m 100 O MET m 110 
    48564 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    48565 0 
    48566 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    48567 -1 N VAL n 39 O VAL n 49 
    48568 55 messages similar to the above omitted 
    48569 Cannot find LINK/SSBOND residue ZN (101 ) 
    48570 Cannot find LINK/SSBOND residue ZN (101 ) 
    48571 Cannot find LINK/SSBOND residue ZN (101 ) 
    48572 Cannot find LINK/SSBOND residue ZN (101 ) 
    48573  
    48574 Chain information for dE_J245_c6 #7 
    48575 --- 
    48576 Chain | Description 
    48577 3 | No description available 
    48578 Z | No description available 
    48579 a | No description available 
    48580 b | No description available 
    48581 c | No description available 
    48582 e | No description available 
    48583 l | No description available 
    48584 v | No description available 
    48585  
    48586 
    48587 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48588 > PTC/dEc7-J246-coot-3-self-restr.pdb id 25.7 name dE_J246_c7
    48589 
    48590 Summary of feedback from opening
    48591 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48592 PTC/dEc7-J246-coot-3-self-restr.pdb 
    48593 --- 
    48594 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    48595 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    48596 6 
    48597 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    48598 8 
    48599 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    48600 23 
    48601 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    48602 13 
    48603 320 messages similar to the above omitted 
    48604 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    48605 -1 N LEU l 102 O LEU l 33 
    48606 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    48607 0 
    48608 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    48609 -1 N LYS l 133 O SER l 30 
    48610 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    48611 0 
    48612 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    48613 115 -1 N ILE m 113 O ILE m 34 
    48614 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    48615 103 -1 N CYS m 100 O MET m 110 
    48616 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    48617 0 
    48618 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    48619 -1 N VAL n 39 O VAL n 49 
    48620 55 messages similar to the above omitted 
    48621 Cannot find LINK/SSBOND residue ZN (101 ) 
    48622 Cannot find LINK/SSBOND residue ZN (101 ) 
    48623 Cannot find LINK/SSBOND residue ZN (101 ) 
    48624 Cannot find LINK/SSBOND residue ZN (101 ) 
    48625  
    48626 Chain information for dE_J246_c7 #7 
    48627 --- 
    48628 Chain | Description 
    48629 3 | No description available 
    48630 Y | No description available 
    48631 Z | No description available 
    48632 a | No description available 
    48633 b | No description available 
    48634 c | No description available 
    48635 e | No description available 
    48636 l | No description available 
    48637 v | No description available 
    48638  
    48639 
    48640 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48641 > PTC/dEc8-J247-coot-3-self-restr.pdb id 25.8 name dE_J247_c8
    48642 
    48643 Summary of feedback from opening
    48644 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48645 PTC/dEc8-J247-coot-3-self-restr.pdb 
    48646 --- 
    48647 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    48648 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    48649 6 
    48650 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    48651 8 
    48652 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    48653 23 
    48654 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    48655 13 
    48656 320 messages similar to the above omitted 
    48657 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    48658 -1 N LEU l 102 O LEU l 33 
    48659 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    48660 0 
    48661 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    48662 -1 N LYS l 133 O SER l 30 
    48663 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    48664 0 
    48665 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    48666 115 -1 N ILE m 113 O ILE m 34 
    48667 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    48668 103 -1 N CYS m 100 O MET m 110 
    48669 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    48670 0 
    48671 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    48672 -1 N VAL n 39 O VAL n 49 
    48673 55 messages similar to the above omitted 
    48674 Cannot find LINK/SSBOND residue ZN (101 ) 
    48675 Cannot find LINK/SSBOND residue ZN (101 ) 
    48676 Cannot find LINK/SSBOND residue ZN (101 ) 
    48677 Cannot find LINK/SSBOND residue ZN (101 ) 
    48678  
    48679 Chain information for dE_J247_c8 #7 
    48680 --- 
    48681 Chain | Description 
    48682 3 | No description available 
    48683 Z | No description available 
    48684 a | No description available 
    48685 b | No description available 
    48686 c | No description available 
    48687 e | No description available 
    48688 l | No description available 
    48689 v | No description available 
    48690  
    48691 
    48692 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48693 > PTC/dEc9-J248-coot-3-self-restr.pdb id 25.9 name dE_J248_c9
    48694 
    48695 Summary of feedback from opening
    48696 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    48697 PTC/dEc9-J248-coot-3-self-restr.pdb 
    48698 --- 
    48699 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    48700 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    48701 6 
    48702 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    48703 8 
    48704 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    48705 23 
    48706 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    48707 13 
    48708 320 messages similar to the above omitted 
    48709 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    48710 -1 N LEU l 102 O LEU l 33 
    48711 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    48712 0 
    48713 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    48714 -1 N LYS l 133 O SER l 30 
    48715 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    48716 0 
    48717 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    48718 115 -1 N ILE m 113 O ILE m 34 
    48719 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    48720 103 -1 N CYS m 100 O MET m 110 
    48721 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    48722 0 
    48723 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    48724 -1 N VAL n 39 O VAL n 49 
    48725 55 messages similar to the above omitted 
    48726 Cannot find LINK/SSBOND residue ZN (101 ) 
    48727 Cannot find LINK/SSBOND residue ZN (101 ) 
    48728 Cannot find LINK/SSBOND residue ZN (101 ) 
    48729 Cannot find LINK/SSBOND residue ZN (101 ) 
    48730  
    48731 Chain information for dE_J248_c9 #7 
    48732 --- 
    48733 Chain | Description 
    48734 3 | No description available 
    48735 Y | No description available 
    48736 Z | No description available 
    48737 a | No description available 
    48738 b | No description available 
    48739 c | No description available 
    48740 e | No description available 
    48741 l | No description available 
    48742 v | No description available 
    48743  
    48744 
    48745 > rename #25 dE-PTC-models
    48746 
    48747 > style #!25.1-10 stick
    48748 
    48749 Changed 102995 atom styles 
    48750 
    48751 > hide #!25.10 models
    48752 
    48753 > hide #!25.9 models
    48754 
    48755 > hide #!25.8 models
    48756 
    48757 > hide #!25.7 models
    48758 
    48759 > hide #!25.6 models
    48760 
    48761 > hide #!25.5 models
    48762 
    48763 > hide #!25.4 models
    48764 
    48765 > hide #!25.3 models
    48766 
    48767 > hide #!25.2 models
    48768 
    48769 > hide #!25.1 models
    48770 
    48771 > show #!25.10 models
    48772 
    48773 > show #!23.10 models
    48774 
    48775 > volume #23.10 level 0.1
    48776 
    48777 > hide #25.10
    48778 
    48779 > color #25.10/Y maroon
    48780 
    48781 > color #25.10/Z rebecca purple
    48782 
    48783 > color #25.10/a:2058-2064 cornflower blue
    48784 
    48785 > color #25.10/a:2447-2451 gold
    48786 
    48787 > color #25.10/a:2499-2506 green yellow
    48788 
    48789 > color #25.10/a:2499-2506 green yellow target c
    48790 
    48791 > ~show #25.10
    48792 
    48793 > ~hbonds #25.10
    48794 
    48795 > name to_show
    48796 > #25.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    48797 
    48798 > show to_show
    48799 
    48800 > ~cartoon #25.10
    48801 
    48802 > cartoon #25.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    48803 
    48804 > transparency #25.10 60 target c
    48805 
    48806 > volume #23.10 color black transparency 0.8
    48807 
    48808 > volume zone #23.10 nearAtoms #25.10/a:2058-2064,2499-2506,2447,2450,2451 &
    48809 > sideonly range 2
    48810 
    48811 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J239_c0.png
    48812 > height 600 width 600 supersample 3
    48813 
    48814 > hide #!25.10 models
    48815 
    48816 > hide #!23.10 models
    48817 
    48818 > show #!25.1 models
    48819 
    48820 > show #!23.1 models
    48821 
    48822 > volume #23.1 level 0.1
    48823 
    48824 > hide #25.1
    48825 
    48826 > color #25.1/Y maroon
    48827 
    48828 > color #25.1/Z rebecca purple
    48829 
    48830 > color #25.1/a:2058-2064 cornflower blue
    48831 
    48832 > color #25.1/a:2447-2451 gold
    48833 
    48834 > color #25.1/a:2499-2506 green yellow
    48835 
    48836 > color #25.1/a:2499-2506 green yellow target c
    48837 
    48838 > ~show #25.1
    48839 
    48840 > ~hbonds #25.1
    48841 
    48842 > name to_show
    48843 > #25.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    48844 
    48845 > show to_show
    48846 
    48847 > ~cartoon #25.1
    48848 
    48849 > cartoon #25.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    48850 
    48851 > transparency #25.1 60 target c
    48852 
    48853 > volume #23.1 color black transparency 0.8
    48854 
    48855 > volume zone #23.1 nearAtoms #25.1/a:2058-2064,2499-2506,2447,2450,2451 &
    48856 > sideonly range 2
    48857 
    48858 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J240_c1.png
    48859 > height 600 width 600 supersample 3
    48860 
    48861 > hide #!25.1 models
    48862 
    48863 > hide #!23.1 models
    48864 
    48865 > show #!25.2 models
    48866 
    48867 > show #!23.2 models
    48868 
    48869 > volume #23.2 level 0.1
    48870 
    48871 > hide #25.2
    48872 
    48873 > color #25.2/Y maroon
    48874 
    48875 > color #25.2/Z rebecca purple
    48876 
    48877 > color #25.2/a:2058-2064 cornflower blue
    48878 
    48879 > color #25.2/a:2447-2451 gold
    48880 
    48881 > color #25.2/a:2499-2506 green yellow
    48882 
    48883 > color #25.2/a:2499-2506 green yellow target c
    48884 
    48885 > ~show #25.2
    48886 
    48887 > ~hbonds #25.2
    48888 
    48889 > name to_show
    48890 > #25.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    48891 
    48892 > show to_show
    48893 
    48894 > ~cartoon #25.2
    48895 
    48896 > cartoon #25.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    48897 
    48898 > transparency #25.2 60 target c
    48899 
    48900 > volume #23.2 color black transparency 0.8
    48901 
    48902 > volume zone #23.2 nearAtoms #25.2/a:2058-2064,2499-2506,2447,2450,2451 &
    48903 > sideonly range 2
    48904 
    48905 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J241_c2.png
    48906 > height 600 width 600 supersample 3
    48907 
    48908 > hide #!25.2 models
    48909 
    48910 > hide #!23.2 models
    48911 
    48912 > show #!25.3 models
    48913 
    48914 > show #!23.3 models
    48915 
    48916 > volume #23.3 level 0.1
    48917 
    48918 > hide #25.3
    48919 
    48920 > color #25.3/Y maroon
    48921 
    48922 > color #25.3/Z rebecca purple
    48923 
    48924 > color #25.3/a:2058-2064 cornflower blue
    48925 
    48926 > color #25.3/a:2447-2451 gold
    48927 
    48928 > color #25.3/a:2499-2506 green yellow
    48929 
    48930 > color #25.3/a:2499-2506 green yellow target c
    48931 
    48932 > ~show #25.3
    48933 
    48934 > ~hbonds #25.3
    48935 
    48936 > name to_show
    48937 > #25.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    48938 
    48939 > show to_show
    48940 
    48941 > ~cartoon #25.3
    48942 
    48943 > cartoon #25.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    48944 
    48945 > transparency #25.3 60 target c
    48946 
    48947 > volume #23.3 color black transparency 0.8
    48948 
    48949 > volume zone #23.3 nearAtoms #25.3/a:2058-2064,2499-2506,2447,2450,2451 &
    48950 > sideonly range 2
    48951 
    48952 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J242_c3.png
    48953 > height 600 width 600 supersample 3
    48954 
    48955 > hide #!25.3 models
    48956 
    48957 > hide #!23.3 models
    48958 
    48959 > show #!25.4 models
    48960 
    48961 > show #!23.4 models
    48962 
    48963 > volume #23.4 level 0.1
    48964 
    48965 > hide #25.4
    48966 
    48967 > color #25.4/Y maroon
    48968 
    48969 > color #25.4/Z rebecca purple
    48970 
    48971 > color #25.4/a:2058-2064 cornflower blue
    48972 
    48973 > color #25.4/a:2447-2451 gold
    48974 
    48975 > color #25.4/a:2499-2506 green yellow
    48976 
    48977 > color #25.4/a:2499-2506 green yellow target c
    48978 
    48979 > ~show #25.4
    48980 
    48981 > ~hbonds #25.4
    48982 
    48983 > name to_show
    48984 > #25.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    48985 
    48986 > show to_show
    48987 
    48988 > ~cartoon #25.4
    48989 
    48990 > cartoon #25.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    48991 
    48992 > transparency #25.4 60 target c
    48993 
    48994 > volume #23.4 color black transparency 0.8
    48995 
    48996 > volume zone #23.4 nearAtoms #25.4/a:2058-2064,2499-2506,2447,2450,2451 &
    48997 > sideonly range 2
    48998 
    48999 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J243_c4.png
    49000 > height 600 width 600 supersample 3
    49001 
    49002 > hide #!25.4 models
    49003 
    49004 > hide #!23.4 models
    49005 
    49006 > show #!25.5 models
    49007 
    49008 > show #!23.5 models
    49009 
    49010 > volume #23.5 level 0.1
    49011 
    49012 > hide #25.5
    49013 
    49014 > color #25.5/Y maroon
    49015 
    49016 > color #25.5/Z rebecca purple
    49017 
    49018 > color #25.5/a:2058-2064 cornflower blue
    49019 
    49020 > color #25.5/a:2447-2451 gold
    49021 
    49022 > color #25.5/a:2499-2506 green yellow
    49023 
    49024 > color #25.5/a:2499-2506 green yellow target c
    49025 
    49026 > ~show #25.5
    49027 
    49028 > ~hbonds #25.5
    49029 
    49030 > name to_show
    49031 > #25.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49032 
    49033 > show to_show
    49034 
    49035 > ~cartoon #25.5
    49036 
    49037 > cartoon #25.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49038 
    49039 > transparency #25.5 60 target c
    49040 
    49041 > volume #23.5 color black transparency 0.8
    49042 
    49043 > volume zone #23.5 nearAtoms #25.5/a:2058-2064,2499-2506,2447,2450,2451 &
    49044 > sideonly range 2
    49045 
    49046 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J244_c5.png
    49047 > height 600 width 600 supersample 3
    49048 
    49049 > hide #!25.5 models
    49050 
    49051 > hide #!23.5 models
    49052 
    49053 > show #!25.6 models
    49054 
    49055 > show #!23.6 models
    49056 
    49057 > volume #23.6 level 0.1
    49058 
    49059 > hide #25.6
    49060 
    49061 > color #25.6/Y maroon
    49062 
    49063 > color #25.6/Z rebecca purple
    49064 
    49065 > color #25.6/a:2058-2064 cornflower blue
    49066 
    49067 > color #25.6/a:2447-2451 gold
    49068 
    49069 > color #25.6/a:2499-2506 green yellow
    49070 
    49071 > color #25.6/a:2499-2506 green yellow target c
    49072 
    49073 > ~show #25.6
    49074 
    49075 > ~hbonds #25.6
    49076 
    49077 > name to_show
    49078 > #25.6/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49079 
    49080 > show to_show
    49081 
    49082 > ~cartoon #25.6
    49083 
    49084 > cartoon #25.6/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49085 
    49086 > transparency #25.6 60 target c
    49087 
    49088 > volume #23.6 color black transparency 0.8
    49089 
    49090 > volume zone #23.6 nearAtoms #25.6/a:2058-2064,2499-2506,2447,2450,2451 &
    49091 > sideonly range 2
    49092 
    49093 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J245_c6.png
    49094 > height 600 width 600 supersample 3
    49095 
    49096 > hide #!25.6 models
    49097 
    49098 > hide #!23.6 models
    49099 
    49100 > show #!25.7 models
    49101 
    49102 > show #!23.7 models
    49103 
    49104 > volume #23.7 level 0.1
    49105 
    49106 > hide #25.7
    49107 
    49108 > color #25.7/Y maroon
    49109 
    49110 > color #25.7/Z rebecca purple
    49111 
    49112 > color #25.7/a:2058-2064 cornflower blue
    49113 
    49114 > color #25.7/a:2447-2451 gold
    49115 
    49116 > color #25.7/a:2499-2506 green yellow
    49117 
    49118 > color #25.7/a:2499-2506 green yellow target c
    49119 
    49120 > ~show #25.7
    49121 
    49122 > ~hbonds #25.7
    49123 
    49124 > name to_show
    49125 > #25.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49126 
    49127 > show to_show
    49128 
    49129 > ~cartoon #25.7
    49130 
    49131 > cartoon #25.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49132 
    49133 > transparency #25.7 60 target c
    49134 
    49135 > volume #23.7 color black transparency 0.8
    49136 
    49137 > volume zone #23.7 nearAtoms #25.7/a:2058-2064,2499-2506,2447,2450,2451 &
    49138 > sideonly range 2
    49139 
    49140 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J246_c7.png
    49141 > height 600 width 600 supersample 3
    49142 
    49143 > hide #!25.7 models
    49144 
    49145 > hide #!23.7 models
    49146 
    49147 > show #!25.8 models
    49148 
    49149 > show #!23.8 models
    49150 
    49151 > volume #23.8 level 0.1
    49152 
    49153 > hide #25.8
    49154 
    49155 > color #25.8/Y maroon
    49156 
    49157 > color #25.8/Z rebecca purple
    49158 
    49159 > color #25.8/a:2058-2064 cornflower blue
    49160 
    49161 > color #25.8/a:2447-2451 gold
    49162 
    49163 > color #25.8/a:2499-2506 green yellow
    49164 
    49165 > color #25.8/a:2499-2506 green yellow target c
    49166 
    49167 > ~show #25.8
    49168 
    49169 > ~hbonds #25.8
    49170 
    49171 > name to_show
    49172 > #25.8/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49173 
    49174 > show to_show
    49175 
    49176 > ~cartoon #25.8
    49177 
    49178 > cartoon #25.8/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49179 
    49180 > transparency #25.8 60 target c
    49181 
    49182 > volume #23.8 color black transparency 0.8
    49183 
    49184 > volume zone #23.8 nearAtoms #25.8/a:2058-2064,2499-2506,2447,2450,2451 &
    49185 > sideonly range 2
    49186 
    49187 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J247_c8.png
    49188 > height 600 width 600 supersample 3
    49189 
    49190 > hide #!25.8 models
    49191 
    49192 > hide #!23.8 models
    49193 
    49194 > show #!25.9 models
    49195 
    49196 > show #!23.9 models
    49197 
    49198 > volume #23.9 level 0.1
    49199 
    49200 > hide #25.9
    49201 
    49202 > color #25.9/Y maroon
    49203 
    49204 > color #25.9/Z rebecca purple
    49205 
    49206 > color #25.9/a:2058-2064 cornflower blue
    49207 
    49208 > color #25.9/a:2447-2451 gold
    49209 
    49210 > color #25.9/a:2499-2506 green yellow
    49211 
    49212 > color #25.9/a:2499-2506 green yellow target c
    49213 
    49214 > ~show #25.9
    49215 
    49216 > ~hbonds #25.9
    49217 
    49218 > name to_show
    49219 > #25.9/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49220 
    49221 > show to_show
    49222 
    49223 > ~cartoon #25.9
    49224 
    49225 > cartoon #25.9/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49226 
    49227 > transparency #25.9 60 target c
    49228 
    49229 > volume #23.9 color black transparency 0.8
    49230 
    49231 > volume zone #23.9 nearAtoms #25.9/a:2058-2064,2499-2506,2447,2450,2451 &
    49232 > sideonly range 2
    49233 
    49234 > save /Users/dalar193/Desktop/A2503_view5_map/A2503_view5_map_dE_J248_c9.png
    49235 > height 600 width 600 supersample 3
    49236 
    49237 > hide #!25.9 models
    49238 
    49239 > hide #!23.9 models
    49240 
    49241 > show #!25.1 models
    49242 
    49243 > view list
    49244 
    49245 Named views: A2503_view4_map, A2503_view5_map 
    49246 
    49247 > view A2503_view4_map
    49248 
    49249 > hide #!25.1 models
    49250 
    49251 > show #!25.10 models
    49252 
    49253 > show #!23.10 models
    49254 
    49255 > volume #23.10 level 0.1
    49256 
    49257 > hide #25.10
    49258 
    49259 > color #25.10/Y maroon
    49260 
    49261 > color #25.10/Z rebecca purple
    49262 
    49263 > color #25.10/a:2058-2064 cornflower blue
    49264 
    49265 > color #25.10/a:2447-2451 gold
    49266 
    49267 > color #25.10/a:2499-2506 green yellow
    49268 
    49269 > color #25.10/a:2499-2506 green yellow target c
    49270 
    49271 > ~show #25.10
    49272 
    49273 > ~hbonds #25.10
    49274 
    49275 > name to_show
    49276 > #25.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49277 
    49278 > show to_show
    49279 
    49280 > ~cartoon #25.10
    49281 
    49282 > cartoon #25.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49283 
    49284 > transparency #25.10 60 target c
    49285 
    49286 > volume #23.10 color black transparency 0.8
    49287 
    49288 > volume zone #23.10 nearAtoms #25.10/a:2058-2064,2499-2506,2447,2450,2451 &
    49289 > sideonly range 2
    49290 
    49291 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J239_c0.png height
    49292 > 600 width 600 supersample 3
    49293 
    49294 > hide #!25.10 models
    49295 
    49296 > hide #!23.10 models
    49297 
    49298 > show #!25.1 models
    49299 
    49300 > show #!23.1 models
    49301 
    49302 > volume #23.1 level 0.1
    49303 
    49304 > hide #25.1
    49305 
    49306 > color #25.1/Y maroon
    49307 
    49308 > color #25.1/Z rebecca purple
    49309 
    49310 > color #25.1/a:2058-2064 cornflower blue
    49311 
    49312 > color #25.1/a:2447-2451 gold
    49313 
    49314 > color #25.1/a:2499-2506 green yellow
    49315 
    49316 > color #25.1/a:2499-2506 green yellow target c
    49317 
    49318 > ~show #25.1
    49319 
    49320 > ~hbonds #25.1
    49321 
    49322 > name to_show
    49323 > #25.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49324 
    49325 > show to_show
    49326 
    49327 > ~cartoon #25.1
    49328 
    49329 > cartoon #25.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49330 
    49331 > transparency #25.1 60 target c
    49332 
    49333 > volume #23.1 color black transparency 0.8
    49334 
    49335 > volume zone #23.1 nearAtoms #25.1/a:2058-2064,2499-2506,2447,2450,2451 &
    49336 > sideonly range 2
    49337 
    49338 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J240_c1.png height
    49339 > 600 width 600 supersample 3
    49340 
    49341 > hide #!25.1 models
    49342 
    49343 > hide #!23.1 models
    49344 
    49345 > show #!25.2 models
    49346 
    49347 > show #!23.2 models
    49348 
    49349 > volume #23.2 level 0.1
    49350 
    49351 > hide #25.2
    49352 
    49353 > color #25.2/Y maroon
    49354 
    49355 > color #25.2/Z rebecca purple
    49356 
    49357 > color #25.2/a:2058-2064 cornflower blue
    49358 
    49359 > color #25.2/a:2447-2451 gold
    49360 
    49361 > color #25.2/a:2499-2506 green yellow
    49362 
    49363 > color #25.2/a:2499-2506 green yellow target c
    49364 
    49365 > ~show #25.2
    49366 
    49367 > ~hbonds #25.2
    49368 
    49369 > name to_show
    49370 > #25.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49371 
    49372 > show to_show
    49373 
    49374 > ~cartoon #25.2
    49375 
    49376 > cartoon #25.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49377 
    49378 > transparency #25.2 60 target c
    49379 
    49380 > volume #23.2 color black transparency 0.8
    49381 
    49382 > volume zone #23.2 nearAtoms #25.2/a:2058-2064,2499-2506,2447,2450,2451 &
    49383 > sideonly range 2
    49384 
    49385 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J241_c2.png height
    49386 > 600 width 600 supersample 3
    49387 
    49388 > hide #!25.2 models
    49389 
    49390 > hide #!23.2 models
    49391 
    49392 > show #!25.3 models
    49393 
    49394 > show #!23.3 models
    49395 
    49396 > volume #23.3 level 0.1
    49397 
    49398 > hide #25.3
    49399 
    49400 > color #25.3/Y maroon
    49401 
    49402 > color #25.3/Z rebecca purple
    49403 
    49404 > color #25.3/a:2058-2064 cornflower blue
    49405 
    49406 > color #25.3/a:2447-2451 gold
    49407 
    49408 > color #25.3/a:2499-2506 green yellow
    49409 
    49410 > color #25.3/a:2499-2506 green yellow target c
    49411 
    49412 > ~show #25.3
    49413 
    49414 > ~hbonds #25.3
    49415 
    49416 > name to_show
    49417 > #25.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49418 
    49419 > show to_show
    49420 
    49421 > ~cartoon #25.3
    49422 
    49423 > cartoon #25.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49424 
    49425 > transparency #25.3 60 target c
    49426 
    49427 > volume #23.3 color black transparency 0.8
    49428 
    49429 > volume zone #23.3 nearAtoms #25.3/a:2058-2064,2499-2506,2447,2450,2451 &
    49430 > sideonly range 2
    49431 
    49432 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J242_c3.png height
    49433 > 600 width 600 supersample 3
    49434 
    49435 > hide #!25.3 models
    49436 
    49437 > hide #!23.3 models
    49438 
    49439 > show #!25.4 models
    49440 
    49441 > show #!23.4 models
    49442 
    49443 > volume #23.4 level 0.1
    49444 
    49445 > hide #25.4
    49446 
    49447 > color #25.4/Y maroon
    49448 
    49449 > color #25.4/Z rebecca purple
    49450 
    49451 > color #25.4/a:2058-2064 cornflower blue
    49452 
    49453 > color #25.4/a:2447-2451 gold
    49454 
    49455 > color #25.4/a:2499-2506 green yellow
    49456 
    49457 > color #25.4/a:2499-2506 green yellow target c
    49458 
    49459 > ~show #25.4
    49460 
    49461 > ~hbonds #25.4
    49462 
    49463 > name to_show
    49464 > #25.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49465 
    49466 > show to_show
    49467 
    49468 > ~cartoon #25.4
    49469 
    49470 > cartoon #25.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49471 
    49472 > transparency #25.4 60 target c
    49473 
    49474 > volume #23.4 color black transparency 0.8
    49475 
    49476 > volume zone #23.4 nearAtoms #25.4/a:2058-2064,2499-2506,2447,2450,2451 &
    49477 > sideonly range 2
    49478 
    49479 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J243_c4.png height
    49480 > 600 width 600 supersample 3
    49481 
    49482 > hide #!25.4 models
    49483 
    49484 > hide #!23.4 models
    49485 
    49486 > show #!25.5 models
    49487 
    49488 > show #!23.5 models
    49489 
    49490 > volume #23.5 level 0.1
    49491 
    49492 > hide #25.5
    49493 
    49494 > color #25.5/Y maroon
    49495 
    49496 > color #25.5/Z rebecca purple
    49497 
    49498 > color #25.5/a:2058-2064 cornflower blue
    49499 
    49500 > color #25.5/a:2447-2451 gold
    49501 
    49502 > color #25.5/a:2499-2506 green yellow
    49503 
    49504 > color #25.5/a:2499-2506 green yellow target c
    49505 
    49506 > ~show #25.5
    49507 
    49508 > ~hbonds #25.5
    49509 
    49510 > name to_show
    49511 > #25.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49512 
    49513 > show to_show
    49514 
    49515 > ~cartoon #25.5
    49516 
    49517 > cartoon #25.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49518 
    49519 > transparency #25.5 60 target c
    49520 
    49521 > volume #23.5 color black transparency 0.8
    49522 
    49523 > volume zone #23.5 nearAtoms #25.5/a:2058-2064,2499-2506,2447,2450,2451 &
    49524 > sideonly range 2
    49525 
    49526 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J244_c5.png height
    49527 > 600 width 600 supersample 3
    49528 
    49529 > hide #!25.5 models
    49530 
    49531 > hide #!23.5 models
    49532 
    49533 > show #!25.6 models
    49534 
    49535 > show #!23.6 models
    49536 
    49537 > volume #23.6 level 0.1
    49538 
    49539 > hide #25.6
    49540 
    49541 > color #25.6/Y maroon
    49542 
    49543 > color #25.6/Z rebecca purple
    49544 
    49545 > color #25.6/a:2058-2064 cornflower blue
    49546 
    49547 > color #25.6/a:2447-2451 gold
    49548 
    49549 > color #25.6/a:2499-2506 green yellow
    49550 
    49551 > color #25.6/a:2499-2506 green yellow target c
    49552 
    49553 > ~show #25.6
    49554 
    49555 > ~hbonds #25.6
    49556 
    49557 > name to_show
    49558 > #25.6/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49559 
    49560 > show to_show
    49561 
    49562 > ~cartoon #25.6
    49563 
    49564 > cartoon #25.6/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49565 
    49566 > transparency #25.6 60 target c
    49567 
    49568 > volume #23.6 color black transparency 0.8
    49569 
    49570 > volume zone #23.6 nearAtoms #25.6/a:2058-2064,2499-2506,2447,2450,2451 &
    49571 > sideonly range 2
    49572 
    49573 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J245_c6.png height
    49574 > 600 width 600 supersample 3
    49575 
    49576 > hide #!25.6 models
    49577 
    49578 > hide #!23.6 models
    49579 
    49580 > show #!25.7 models
    49581 
    49582 > show #!23.7 models
    49583 
    49584 > volume #23.7 level 0.1
    49585 
    49586 > hide #25.7
    49587 
    49588 > color #25.7/Y maroon
    49589 
    49590 > color #25.7/Z rebecca purple
    49591 
    49592 > color #25.7/a:2058-2064 cornflower blue
    49593 
    49594 > color #25.7/a:2447-2451 gold
    49595 
    49596 > color #25.7/a:2499-2506 green yellow
    49597 
    49598 > color #25.7/a:2499-2506 green yellow target c
    49599 
    49600 > ~show #25.7
    49601 
    49602 > ~hbonds #25.7
    49603 
    49604 > name to_show
    49605 > #25.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49606 
    49607 > show to_show
    49608 
    49609 > ~cartoon #25.7
    49610 
    49611 > cartoon #25.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49612 
    49613 > transparency #25.7 60 target c
    49614 
    49615 > volume #23.7 color black transparency 0.8
    49616 
    49617 > volume zone #23.7 nearAtoms #25.7/a:2058-2064,2499-2506,2447,2450,2451 &
    49618 > sideonly range 2
    49619 
    49620 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J246_c7.png height
    49621 > 600 width 600 supersample 3
    49622 
    49623 > hide #!25.7 models
    49624 
    49625 > hide #!23.7 models
    49626 
    49627 > show #!25.8 models
    49628 
    49629 > show #!23.8 models
    49630 
    49631 > volume #23.8 level 0.1
    49632 
    49633 > hide #25.8
    49634 
    49635 > color #25.8/Y maroon
    49636 
    49637 > color #25.8/Z rebecca purple
    49638 
    49639 > color #25.8/a:2058-2064 cornflower blue
    49640 
    49641 > color #25.8/a:2447-2451 gold
    49642 
    49643 > color #25.8/a:2499-2506 green yellow
    49644 
    49645 > color #25.8/a:2499-2506 green yellow target c
    49646 
    49647 > ~show #25.8
    49648 
    49649 > ~hbonds #25.8
    49650 
    49651 > name to_show
    49652 > #25.8/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49653 
    49654 > show to_show
    49655 
    49656 > ~cartoon #25.8
    49657 
    49658 > cartoon #25.8/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49659 
    49660 > transparency #25.8 60 target c
    49661 
    49662 > volume #23.8 color black transparency 0.8
    49663 
    49664 > volume zone #23.8 nearAtoms #25.8/a:2058-2064,2499-2506,2447,2450,2451 &
    49665 > sideonly range 2
    49666 
    49667 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J247_c8.png height
    49668 > 600 width 600 supersample 3
    49669 
    49670 > hide #!25.8 models
    49671 
    49672 > hide #!23.8 models
    49673 
    49674 > show #!25.9 models
    49675 
    49676 > show #!23.9 models
    49677 
    49678 > volume #23.9 level 0.1
    49679 
    49680 > hide #25.9
    49681 
    49682 > color #25.9/Y maroon
    49683 
    49684 > color #25.9/Z rebecca purple
    49685 
    49686 > color #25.9/a:2058-2064 cornflower blue
    49687 
    49688 > color #25.9/a:2447-2451 gold
    49689 
    49690 > color #25.9/a:2499-2506 green yellow
    49691 
    49692 > color #25.9/a:2499-2506 green yellow target c
    49693 
    49694 > ~show #25.9
    49695 
    49696 > ~hbonds #25.9
    49697 
    49698 > name to_show
    49699 > #25.9/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49700 
    49701 > show to_show
    49702 
    49703 > ~cartoon #25.9
    49704 
    49705 > cartoon #25.9/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49706 
    49707 > transparency #25.9 60 target c
    49708 
    49709 > volume #23.9 color black transparency 0.8
    49710 
    49711 > volume zone #23.9 nearAtoms #25.9/a:2058-2064,2499-2506,2447,2450,2451 &
    49712 > sideonly range 2
    49713 
    49714 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J248_c9.png height
    49715 > 600 width 600 supersample 3
    49716 
    49717 > hide #!25.9 models
    49718 
    49719 > hide #!23.9 models
    49720 
    49721 > show #!25.10 models
    49722 
    49723 > hide #25.10
    49724 
    49725 > color #25.10/Y maroon
    49726 
    49727 > color #25.10/Z rebecca purple
    49728 
    49729 > color #25.10/a:2058-2064 cornflower blue
    49730 
    49731 > color #25.10/a:2447-2451 gold
    49732 
    49733 > color #25.10/a:2499-2506 green yellow
    49734 
    49735 > color #25.10/a:2499-2506 green yellow target c
    49736 
    49737 > ~show #25.10
    49738 
    49739 > ~hbonds #25.10
    49740 
    49741 > name to_show
    49742 > #25.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49743 
    49744 > show to_show
    49745 
    49746 > ~cartoon #25.10
    49747 
    49748 > cartoon #25.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49749 
    49750 > transparency #25.10 60 target c
    49751 
    49752 > volume # color black transparency 0.8
    49753 
    49754 Expected a density maps specifier or a keyword 
    49755 
    49756 > volume zone # nearAtoms #25.10/a:2058-2064,2499-2506,2447,2450,2451 &
    49757 > sideonly range 2
    49758 
    49759 Missing or invalid "volumes" argument: invalid density maps specifier 
    49760 
    49761 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J239_c0.png height
    49762 > 600 width 600 supersample 3
    49763 
    49764 > hide #!25.10 models
    49765 
    49766 > hide #!23.10 models
    49767 
    49768 > show #!25.1 models
    49769 
    49770 > hide #25.1
    49771 
    49772 > color #25.1/Y maroon
    49773 
    49774 > color #25.1/Z rebecca purple
    49775 
    49776 > color #25.1/a:2058-2064 cornflower blue
    49777 
    49778 > color #25.1/a:2447-2451 gold
    49779 
    49780 > color #25.1/a:2499-2506 green yellow
    49781 
    49782 > color #25.1/a:2499-2506 green yellow target c
    49783 
    49784 > ~show #25.1
    49785 
    49786 > ~hbonds #25.1
    49787 
    49788 > name to_show
    49789 > #25.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49790 
    49791 > show to_show
    49792 
    49793 > ~cartoon #25.1
    49794 
    49795 > cartoon #25.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49796 
    49797 > transparency #25.1 60 target c
    49798 
    49799 > volume # color black transparency 0.8
    49800 
    49801 Expected a density maps specifier or a keyword 
    49802 
    49803 > volume zone # nearAtoms #25.1/a:2058-2064,2499-2506,2447,2450,2451 &
    49804 > sideonly range 2
    49805 
    49806 Missing or invalid "volumes" argument: invalid density maps specifier 
    49807 
    49808 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J240_c1.png height
    49809 > 600 width 600 supersample 3
    49810 
    49811 > hide #!25.1 models
    49812 
    49813 > hide #!23.1 models
    49814 
    49815 > show #!25.2 models
    49816 
    49817 > hide #25.2
    49818 
    49819 > color #25.2/Y maroon
    49820 
    49821 > color #25.2/Z rebecca purple
    49822 
    49823 > color #25.2/a:2058-2064 cornflower blue
    49824 
    49825 > color #25.2/a:2447-2451 gold
    49826 
    49827 > color #25.2/a:2499-2506 green yellow
    49828 
    49829 > color #25.2/a:2499-2506 green yellow target c
    49830 
    49831 > ~show #25.2
    49832 
    49833 > ~hbonds #25.2
    49834 
    49835 > name to_show
    49836 > #25.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49837 
    49838 > show to_show
    49839 
    49840 > ~cartoon #25.2
    49841 
    49842 > cartoon #25.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49843 
    49844 > transparency #25.2 60 target c
    49845 
    49846 > volume # color black transparency 0.8
    49847 
    49848 Expected a density maps specifier or a keyword 
    49849 
    49850 > volume zone # nearAtoms #25.2/a:2058-2064,2499-2506,2447,2450,2451 &
    49851 > sideonly range 2
    49852 
    49853 Missing or invalid "volumes" argument: invalid density maps specifier 
    49854 
    49855 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J241_c2.png height
    49856 > 600 width 600 supersample 3
    49857 
    49858 > hide #!25.2 models
    49859 
    49860 > hide #!23.2 models
    49861 
    49862 > show #!25.3 models
    49863 
    49864 > hide #25.3
    49865 
    49866 > color #25.3/Y maroon
    49867 
    49868 > color #25.3/Z rebecca purple
    49869 
    49870 > color #25.3/a:2058-2064 cornflower blue
    49871 
    49872 > color #25.3/a:2447-2451 gold
    49873 
    49874 > color #25.3/a:2499-2506 green yellow
    49875 
    49876 > color #25.3/a:2499-2506 green yellow target c
    49877 
    49878 > ~show #25.3
    49879 
    49880 > ~hbonds #25.3
    49881 
    49882 > name to_show
    49883 > #25.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49884 
    49885 > show to_show
    49886 
    49887 > ~cartoon #25.3
    49888 
    49889 > cartoon #25.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49890 
    49891 > transparency #25.3 60 target c
    49892 
    49893 > volume # color black transparency 0.8
    49894 
    49895 Expected a density maps specifier or a keyword 
    49896 
    49897 > volume zone # nearAtoms #25.3/a:2058-2064,2499-2506,2447,2450,2451 &
    49898 > sideonly range 2
    49899 
    49900 Missing or invalid "volumes" argument: invalid density maps specifier 
    49901 
    49902 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J242_c3.png height
    49903 > 600 width 600 supersample 3
    49904 
    49905 > hide #!25.3 models
    49906 
    49907 > hide #!23.3 models
    49908 
    49909 > show #!25.4 models
    49910 
    49911 > hide #25.4
    49912 
    49913 > color #25.4/Y maroon
    49914 
    49915 > color #25.4/Z rebecca purple
    49916 
    49917 > color #25.4/a:2058-2064 cornflower blue
    49918 
    49919 > color #25.4/a:2447-2451 gold
    49920 
    49921 > color #25.4/a:2499-2506 green yellow
    49922 
    49923 > color #25.4/a:2499-2506 green yellow target c
    49924 
    49925 > ~show #25.4
    49926 
    49927 > ~hbonds #25.4
    49928 
    49929 > name to_show
    49930 > #25.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49931 
    49932 > show to_show
    49933 
    49934 > ~cartoon #25.4
    49935 
    49936 > cartoon #25.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49937 
    49938 > transparency #25.4 60 target c
    49939 
    49940 > volume # color black transparency 0.8
    49941 
    49942 Expected a density maps specifier or a keyword 
    49943 
    49944 > volume zone # nearAtoms #25.4/a:2058-2064,2499-2506,2447,2450,2451 &
    49945 > sideonly range 2
    49946 
    49947 Missing or invalid "volumes" argument: invalid density maps specifier 
    49948 
    49949 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J243_c4.png height
    49950 > 600 width 600 supersample 3
    49951 
    49952 > hide #!25.4 models
    49953 
    49954 > hide #!23.4 models
    49955 
    49956 > show #!25.5 models
    49957 
    49958 > hide #25.5
    49959 
    49960 > color #25.5/Y maroon
    49961 
    49962 > color #25.5/Z rebecca purple
    49963 
    49964 > color #25.5/a:2058-2064 cornflower blue
    49965 
    49966 > color #25.5/a:2447-2451 gold
    49967 
    49968 > color #25.5/a:2499-2506 green yellow
    49969 
    49970 > color #25.5/a:2499-2506 green yellow target c
    49971 
    49972 > ~show #25.5
    49973 
    49974 > ~hbonds #25.5
    49975 
    49976 > name to_show
    49977 > #25.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    49978 
    49979 > show to_show
    49980 
    49981 > ~cartoon #25.5
    49982 
    49983 > cartoon #25.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    49984 
    49985 > transparency #25.5 60 target c
    49986 
    49987 > volume # color black transparency 0.8
    49988 
    49989 Expected a density maps specifier or a keyword 
    49990 
    49991 > volume zone # nearAtoms #25.5/a:2058-2064,2499-2506,2447,2450,2451 &
    49992 > sideonly range 2
    49993 
    49994 Missing or invalid "volumes" argument: invalid density maps specifier 
    49995 
    49996 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J244_c5.png height
    49997 > 600 width 600 supersample 3
    49998 
    49999 > hide #!25.5 models
    50000 
    50001 > hide #!23.5 models
    50002 
    50003 > show #!25.6 models
    50004 
    50005 > hide #25.6
    50006 
    50007 > color #25.6/Y maroon
    50008 
    50009 > color #25.6/Z rebecca purple
    50010 
    50011 > color #25.6/a:2058-2064 cornflower blue
    50012 
    50013 > color #25.6/a:2447-2451 gold
    50014 
    50015 > color #25.6/a:2499-2506 green yellow
    50016 
    50017 > color #25.6/a:2499-2506 green yellow target c
    50018 
    50019 > ~show #25.6
    50020 
    50021 > ~hbonds #25.6
    50022 
    50023 > name to_show
    50024 > #25.6/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    50025 
    50026 > show to_show
    50027 
    50028 > ~cartoon #25.6
    50029 
    50030 > cartoon #25.6/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    50031 
    50032 > transparency #25.6 60 target c
    50033 
    50034 > volume # color black transparency 0.8
    50035 
    50036 Expected a density maps specifier or a keyword 
    50037 
    50038 > volume zone # nearAtoms #25.6/a:2058-2064,2499-2506,2447,2450,2451 &
    50039 > sideonly range 2
    50040 
    50041 Missing or invalid "volumes" argument: invalid density maps specifier 
    50042 
    50043 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J245_c6.png height
    50044 > 600 width 600 supersample 3
    50045 
    50046 > hide #!25.6 models
    50047 
    50048 > hide #!23.6 models
    50049 
    50050 > show #!25.7 models
    50051 
    50052 > hide #25.7
    50053 
    50054 > color #25.7/Y maroon
    50055 
    50056 > color #25.7/Z rebecca purple
    50057 
    50058 > color #25.7/a:2058-2064 cornflower blue
    50059 
    50060 > color #25.7/a:2447-2451 gold
    50061 
    50062 > color #25.7/a:2499-2506 green yellow
    50063 
    50064 > color #25.7/a:2499-2506 green yellow target c
    50065 
    50066 > ~show #25.7
    50067 
    50068 > ~hbonds #25.7
    50069 
    50070 > name to_show
    50071 > #25.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    50072 
    50073 > show to_show
    50074 
    50075 > ~cartoon #25.7
    50076 
    50077 > cartoon #25.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    50078 
    50079 > transparency #25.7 60 target c
    50080 
    50081 > volume # color black transparency 0.8
    50082 
    50083 Expected a density maps specifier or a keyword 
    50084 
    50085 > volume zone # nearAtoms #25.7/a:2058-2064,2499-2506,2447,2450,2451 &
    50086 > sideonly range 2
    50087 
    50088 Missing or invalid "volumes" argument: invalid density maps specifier 
    50089 
    50090 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J246_c7.png height
    50091 > 600 width 600 supersample 3
    50092 
    50093 > hide #!25.7 models
    50094 
    50095 > hide #!23.7 models
    50096 
    50097 > show #!25.8 models
    50098 
    50099 > hide #25.8
    50100 
    50101 > color #25.8/Y maroon
    50102 
    50103 > color #25.8/Z rebecca purple
    50104 
    50105 > color #25.8/a:2058-2064 cornflower blue
    50106 
    50107 > color #25.8/a:2447-2451 gold
    50108 
    50109 > color #25.8/a:2499-2506 green yellow
    50110 
    50111 > color #25.8/a:2499-2506 green yellow target c
    50112 
    50113 > ~show #25.8
    50114 
    50115 > ~hbonds #25.8
    50116 
    50117 > name to_show
    50118 > #25.8/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    50119 
    50120 > show to_show
    50121 
    50122 > ~cartoon #25.8
    50123 
    50124 > cartoon #25.8/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    50125 
    50126 > transparency #25.8 60 target c
    50127 
    50128 > volume # color black transparency 0.8
    50129 
    50130 Expected a density maps specifier or a keyword 
    50131 
    50132 > volume zone # nearAtoms #25.8/a:2058-2064,2499-2506,2447,2450,2451 &
    50133 > sideonly range 2
    50134 
    50135 Missing or invalid "volumes" argument: invalid density maps specifier 
    50136 
    50137 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J247_c8.png height
    50138 > 600 width 600 supersample 3
    50139 
    50140 > hide #!25.8 models
    50141 
    50142 > hide #!23.8 models
    50143 
    50144 > show #!25.9 models
    50145 
    50146 > hide #25.9
    50147 
    50148 > color #25.9/Y maroon
    50149 
    50150 > color #25.9/Z rebecca purple
    50151 
    50152 > color #25.9/a:2058-2064 cornflower blue
    50153 
    50154 > color #25.9/a:2447-2451 gold
    50155 
    50156 > color #25.9/a:2499-2506 green yellow
    50157 
    50158 > color #25.9/a:2499-2506 green yellow target c
    50159 
    50160 > ~show #25.9
    50161 
    50162 > ~hbonds #25.9
    50163 
    50164 > name to_show
    50165 > #25.9/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    50166 
    50167 > show to_show
    50168 
    50169 > ~cartoon #25.9
    50170 
    50171 > cartoon #25.9/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    50172 
    50173 > transparency #25.9 60 target c
    50174 
    50175 > volume # color black transparency 0.8
    50176 
    50177 Expected a density maps specifier or a keyword 
    50178 
    50179 > volume zone # nearAtoms #25.9/a:2058-2064,2499-2506,2447,2450,2451 &
    50180 > sideonly range 2
    50181 
    50182 Missing or invalid "volumes" argument: invalid density maps specifier 
    50183 
    50184 > save /Users/dalar193/Desktop/A2503_view4/A2503_view4_dE_J248_c9.png height
    50185 > 600 width 600 supersample 3
    50186 
    50187 > hide #!25.9 models
    50188 
    50189 > hide #!23.9 models
    50190 
    50191 > show #!25.10 models
    50192 
    50193 > show #!23.10 models
    50194 
    50195 > volume #23.10 level 0.1
    50196 
    50197 > hide #25.10
    50198 
    50199 > color #25.10/Y maroon
    50200 
    50201 > color #25.10/Z rebecca purple
    50202 
    50203 > color #25.10/a:2058-2064 cornflower blue
    50204 
    50205 > color #25.10/a:2447-2451 gold
    50206 
    50207 > color #25.10/a:2499-2506 green yellow
    50208 
    50209 > color #25.10/a:2499-2506 green yellow target c
    50210 
    50211 > ~show #25.10
    50212 
    50213 > ~hbonds #25.10
    50214 
    50215 > name to_show
    50216 > #25.10/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    50217 
    50218 > show to_show
    50219 
    50220 > ~cartoon #25.10
    50221 
    50222 > cartoon #25.10/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    50223 
    50224 > transparency #25.10 60 target c
    50225 
    50226 > volume #23.10 color black transparency 0.8
    50227 
    50228 > volume zone #23.10 nearAtoms #25.10/a:2058-2064,2499-2506,2447,2450,2451 &
    50229 > sideonly range 2
    50230 
    50231 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J239_c0.png
    50232 > height 600 width 600 supersample 3
    50233 
    50234 > hide #!25.10 models
    50235 
    50236 > hide #!23.10 models
    50237 
    50238 > show #!25.1 models
    50239 
    50240 > show #!23.1 models
    50241 
    50242 > volume #23.1 level 0.1
    50243 
    50244 > hide #25.1
    50245 
    50246 > color #25.1/Y maroon
    50247 
    50248 > color #25.1/Z rebecca purple
    50249 
    50250 > color #25.1/a:2058-2064 cornflower blue
    50251 
    50252 > color #25.1/a:2447-2451 gold
    50253 
    50254 > color #25.1/a:2499-2506 green yellow
    50255 
    50256 > color #25.1/a:2499-2506 green yellow target c
    50257 
    50258 > ~show #25.1
    50259 
    50260 > ~hbonds #25.1
    50261 
    50262 > name to_show
    50263 > #25.1/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    50264 
    50265 > show to_show
    50266 
    50267 > ~cartoon #25.1
    50268 
    50269 > cartoon #25.1/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    50270 
    50271 > transparency #25.1 60 target c
    50272 
    50273 > volume #23.1 color black transparency 0.8
    50274 
    50275 > volume zone #23.1 nearAtoms #25.1/a:2058-2064,2499-2506,2447,2450,2451 &
    50276 > sideonly range 2
    50277 
    50278 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J240_c1.png
    50279 > height 600 width 600 supersample 3
    50280 
    50281 > hide #!25.1 models
    50282 
    50283 > hide #!23.1 models
    50284 
    50285 > show #!25.2 models
    50286 
    50287 > show #!23.2 models
    50288 
    50289 > volume #23.2 level 0.1
    50290 
    50291 > hide #25.2
    50292 
    50293 > color #25.2/Y maroon
    50294 
    50295 > color #25.2/Z rebecca purple
    50296 
    50297 > color #25.2/a:2058-2064 cornflower blue
    50298 
    50299 > color #25.2/a:2447-2451 gold
    50300 
    50301 > color #25.2/a:2499-2506 green yellow
    50302 
    50303 > color #25.2/a:2499-2506 green yellow target c
    50304 
    50305 > ~show #25.2
    50306 
    50307 > ~hbonds #25.2
    50308 
    50309 > name to_show
    50310 > #25.2/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    50311 
    50312 > show to_show
    50313 
    50314 > ~cartoon #25.2
    50315 
    50316 > cartoon #25.2/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    50317 
    50318 > transparency #25.2 60 target c
    50319 
    50320 > volume #23.2 color black transparency 0.8
    50321 
    50322 > volume zone #23.2 nearAtoms #25.2/a:2058-2064,2499-2506,2447,2450,2451 &
    50323 > sideonly range 2
    50324 
    50325 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J241_c2.png
    50326 > height 600 width 600 supersample 3
    50327 
    50328 > hide #!25.2 models
    50329 
    50330 > hide #!23.2 models
    50331 
    50332 > show #!25.3 models
    50333 
    50334 > show #!23.3 models
    50335 
    50336 > volume #23.3 level 0.1
    50337 
    50338 > hide #25.3
    50339 
    50340 > color #25.3/Y maroon
    50341 
    50342 > color #25.3/Z rebecca purple
    50343 
    50344 > color #25.3/a:2058-2064 cornflower blue
    50345 
    50346 > color #25.3/a:2447-2451 gold
    50347 
    50348 > color #25.3/a:2499-2506 green yellow
    50349 
    50350 > color #25.3/a:2499-2506 green yellow target c
    50351 
    50352 > ~show #25.3
    50353 
    50354 > ~hbonds #25.3
    50355 
    50356 > name to_show
    50357 > #25.3/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    50358 
    50359 > show to_show
    50360 
    50361 > ~cartoon #25.3
    50362 
    50363 > cartoon #25.3/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    50364 
    50365 > transparency #25.3 60 target c
    50366 
    50367 > volume #23.3 color black transparency 0.8
    50368 
    50369 > volume zone #23.3 nearAtoms #25.3/a:2058-2064,2499-2506,2447,2450,2451 &
    50370 > sideonly range 2
    50371 
    50372 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J242_c3.png
    50373 > height 600 width 600 supersample 3
    50374 
    50375 > hide #!25.3 models
    50376 
    50377 > hide #!23.3 models
    50378 
    50379 > show #!25.4 models
    50380 
    50381 > show #!23.4 models
    50382 
    50383 > volume #23.4 level 0.1
    50384 
    50385 > hide #25.4
    50386 
    50387 > color #25.4/Y maroon
    50388 
    50389 > color #25.4/Z rebecca purple
    50390 
    50391 > color #25.4/a:2058-2064 cornflower blue
    50392 
    50393 > color #25.4/a:2447-2451 gold
    50394 
    50395 > color #25.4/a:2499-2506 green yellow
    50396 
    50397 > color #25.4/a:2499-2506 green yellow target c
    50398 
    50399 > ~show #25.4
    50400 
    50401 > ~hbonds #25.4
    50402 
    50403 > name to_show
    50404 > #25.4/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    50405 
    50406 > show to_show
    50407 
    50408 > ~cartoon #25.4
    50409 
    50410 > cartoon #25.4/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    50411 
    50412 > transparency #25.4 60 target c
    50413 
    50414 > volume #23.4 color black transparency 0.8
    50415 
    50416 > volume zone #23.4 nearAtoms #25.4/a:2058-2064,2499-2506,2447,2450,2451 &
    50417 > sideonly range 2
    50418 
    50419 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J243_c4.png
    50420 > height 600 width 600 supersample 3
    50421 
    50422 > hide #!25.4 models
    50423 
    50424 > hide #!23.4 models
    50425 
    50426 > show #!25.5 models
    50427 
    50428 > show #!23.5 models
    50429 
    50430 > volume #23.5 level 0.1
    50431 
    50432 > hide #25.5
    50433 
    50434 > color #25.5/Y maroon
    50435 
    50436 > color #25.5/Z rebecca purple
    50437 
    50438 > color #25.5/a:2058-2064 cornflower blue
    50439 
    50440 > color #25.5/a:2447-2451 gold
    50441 
    50442 > color #25.5/a:2499-2506 green yellow
    50443 
    50444 > color #25.5/a:2499-2506 green yellow target c
    50445 
    50446 > ~show #25.5
    50447 
    50448 > ~hbonds #25.5
    50449 
    50450 > name to_show
    50451 > #25.5/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    50452 
    50453 > show to_show
    50454 
    50455 > ~cartoon #25.5
    50456 
    50457 > cartoon #25.5/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    50458 
    50459 > transparency #25.5 60 target c
    50460 
    50461 > volume #23.5 color black transparency 0.8
    50462 
    50463 > volume zone #23.5 nearAtoms #25.5/a:2058-2064,2499-2506,2447,2450,2451 &
    50464 > sideonly range 2
    50465 
    50466 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J244_c5.png
    50467 > height 600 width 600 supersample 3
    50468 
    50469 > hide #!25.5 models
    50470 
    50471 > hide #!23.5 models
    50472 
    50473 > show #!25.6 models
    50474 
    50475 > show #!23.6 models
    50476 
    50477 > volume #23.6 level 0.1
    50478 
    50479 > hide #25.6
    50480 
    50481 > color #25.6/Y maroon
    50482 
    50483 > color #25.6/Z rebecca purple
    50484 
    50485 > color #25.6/a:2058-2064 cornflower blue
    50486 
    50487 > color #25.6/a:2447-2451 gold
    50488 
    50489 > color #25.6/a:2499-2506 green yellow
    50490 
    50491 > color #25.6/a:2499-2506 green yellow target c
    50492 
    50493 > ~show #25.6
    50494 
    50495 > ~hbonds #25.6
    50496 
    50497 > name to_show
    50498 > #25.6/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    50499 
    50500 > show to_show
    50501 
    50502 > ~cartoon #25.6
    50503 
    50504 > cartoon #25.6/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    50505 
    50506 > transparency #25.6 60 target c
    50507 
    50508 > volume #23.6 color black transparency 0.8
    50509 
    50510 > volume zone #23.6 nearAtoms #25.6/a:2058-2064,2499-2506,2447,2450,2451 &
    50511 > sideonly range 2
    50512 
    50513 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J245_c6.png
    50514 > height 600 width 600 supersample 3
    50515 
    50516 > hide #!25.6 models
    50517 
    50518 > hide #!23.6 models
    50519 
    50520 > show #!25.7 models
    50521 
    50522 > show #!23.7 models
    50523 
    50524 > volume #23.7 level 0.1
    50525 
    50526 > hide #25.7
    50527 
    50528 > color #25.7/Y maroon
    50529 
    50530 > color #25.7/Z rebecca purple
    50531 
    50532 > color #25.7/a:2058-2064 cornflower blue
    50533 
    50534 > color #25.7/a:2447-2451 gold
    50535 
    50536 > color #25.7/a:2499-2506 green yellow
    50537 
    50538 > color #25.7/a:2499-2506 green yellow target c
    50539 
    50540 > ~show #25.7
    50541 
    50542 > ~hbonds #25.7
    50543 
    50544 > name to_show
    50545 > #25.7/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    50546 
    50547 > show to_show
    50548 
    50549 > ~cartoon #25.7
    50550 
    50551 > cartoon #25.7/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    50552 
    50553 > transparency #25.7 60 target c
    50554 
    50555 > volume #23.7 color black transparency 0.8
    50556 
    50557 > volume zone #23.7 nearAtoms #25.7/a:2058-2064,2499-2506,2447,2450,2451 &
    50558 > sideonly range 2
    50559 
    50560 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J246_c7.png
    50561 > height 600 width 600 supersample 3
    50562 
    50563 > hide #!25.7 models
    50564 
    50565 > hide #!23.7 models
    50566 
    50567 > show #!25.8 models
    50568 
    50569 > show #!23.8 models
    50570 
    50571 > volume #23.8 level 0.1
    50572 
    50573 > hide #25.8
    50574 
    50575 > color #25.8/Y maroon
    50576 
    50577 > color #25.8/Z rebecca purple
    50578 
    50579 > color #25.8/a:2058-2064 cornflower blue
    50580 
    50581 > color #25.8/a:2447-2451 gold
    50582 
    50583 > color #25.8/a:2499-2506 green yellow
    50584 
    50585 > color #25.8/a:2499-2506 green yellow target c
    50586 
    50587 > ~show #25.8
    50588 
    50589 > ~hbonds #25.8
    50590 
    50591 > name to_show
    50592 > #25.8/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    50593 
    50594 > show to_show
    50595 
    50596 > ~cartoon #25.8
    50597 
    50598 > cartoon #25.8/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    50599 
    50600 > transparency #25.8 60 target c
    50601 
    50602 > volume #23.8 color black transparency 0.8
    50603 
    50604 > volume zone #23.8 nearAtoms #25.8/a:2058-2064,2499-2506,2447,2450,2451 &
    50605 > sideonly range 2
    50606 
    50607 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J247_c8.png
    50608 > height 600 width 600 supersample 3
    50609 
    50610 > hide #!25.8 models
    50611 
    50612 > hide #!23.8 models
    50613 
    50614 > show #!25.9 models
    50615 
    50616 > show #!23.9 models
    50617 
    50618 > volume #23.9 level 0.1
    50619 
    50620 > hide #25.9
    50621 
    50622 > color #25.9/Y maroon
    50623 
    50624 > color #25.9/Z rebecca purple
    50625 
    50626 > color #25.9/a:2058-2064 cornflower blue
    50627 
    50628 > color #25.9/a:2447-2451 gold
    50629 
    50630 > color #25.9/a:2499-2506 green yellow
    50631 
    50632 > color #25.9/a:2499-2506 green yellow target c
    50633 
    50634 > ~show #25.9
    50635 
    50636 > ~hbonds #25.9
    50637 
    50638 > name to_show
    50639 > #25.9/a:2058-2064,2499-2506,2447,2450-2451/Y:73-76,101/Z:73-76,101
    50640 
    50641 > show to_show
    50642 
    50643 > ~cartoon #25.9
    50644 
    50645 > cartoon #25.9/a:2058-2064,2499-2506,2447-2451/Y:73-76/Z:73-76
    50646 
    50647 > transparency #25.9 60 target c
    50648 
    50649 > volume #23.9 color black transparency 0.8
    50650 
    50651 > volume zone #23.9 nearAtoms #25.9/a:2058-2064,2499-2506,2447,2450,2451 &
    50652 > sideonly range 2
    50653 
    50654 > save /Users/dalar193/Desktop/A2503_view4_map/A2503_view4_map_dE_J248_c9.png
    50655 > height 600 width 600 supersample 3
    50656 
    50657 > hide #!25.9 models
    50658 
    50659 > hide #!23.9 models
    50660 
    50661 > show #!25.2 models
    50662 
    50663 > hide #!25.2 models
    50664 
    50665 > show #!25.3 models
    50666 
    50667 > hide #!25.3 models
    50668 
    50669 > show #!25.4 models
    50670 
    50671 > show #!23.4 models
    50672 
    50673 > hide #!25.4 models
    50674 
    50675 > show #!25.4 models
    50676 
    50677 > hide #!25.4 models
    50678 
    50679 > show #!25.4 models
    50680 
    50681 > show #!25.3 models
    50682 
    50683 > hide #!25.3 models
    50684 
    50685 > show #!25.3 models
    50686 
    50687 > hide #!25.3 models
    50688 
    50689 > show #!25.3 models
    50690 
    50691 > hide #!25.3 models
    50692 
    50693 > hide #!23.4 models
    50694 
    50695 > hide #!25.4 models
    50696 
    50697 > show #!6.1 models
    50698 
    50699 > show #!25.1 models
    50700 
    50701 > hide #!25.1 models
    50702 
    50703 > show #!25.1 models
    50704 
    50705 > hide #!25.1 models
    50706 
    50707 > show #!25.1 models
    50708 
    50709 > hide #!25.1 models
    50710 
    50711 > show #!25.2 models
    50712 
    50713 > hide #!25.2 models
    50714 
    50715 > show #!25.2 models
    50716 
    50717 > hide #!25.2 models
    50718 
    50719 > show #!25.2 models
    50720 
    50721 > hide #!6.1 models
    50722 
    50723 > show #!23.2 models
    50724 
    50725 > hide #!25.2 models
    50726 
    50727 > hide #!23.2 models
    50728 
    50729 > show #!6.1 models
    50730 
    50731 > show #!4.1 models
    50732 
    50733 > view #6.1/Y:76
    50734 
    50735 > show #6.1/a:2602
    50736 
    50737 [Repeated 1 time(s)]
    50738 
    50739 > show #6.1/a:2601-2603 target c
    50740 
    50741 > show #6.1/a:2602/Y:75-76
    50742 
    50743 > show #6.1/a:2601-2603 target c
    50744 
    50745 > volume zone #4.1 nearAtoms #6.1/a:2602/Y:75-76
    50746 
    50747 > show #6.1/a:2602/Y:75-76/v:2-4
    50748 
    50749 > show #6.1/a:2601-2603 target c
    50750 
    50751 > volume zone #4.1 nearAtoms #6.1/a:2602/Y:75-76
    50752 
    50753 > name to_show_a #6.1/a:2602/Y:75-76/v:2-4
    50754 
    50755 > show to_show_a
    50756 
    50757 > show #6.1/a:2601-2603 target c
    50758 
    50759 > volume zone #4.1 nearAtoms to_show_a
    50760 
    50761 > hide #6.1
    50762 
    50763 > name to_show_a #6.1/a:2602/Y:75-76/v:2-4
    50764 
    50765 > show to_show_a
    50766 
    50767 > show #6.1/a:2601-2603 target c
    50768 
    50769 > volume zone #4.1 nearAtoms to_show_a
    50770 
    50771 > hide #6.1
    50772 
    50773 > ~cartoon
    50774 
    50775 > name to_show_a #6.1/a:2602/Y:75-76/v:2-4
    50776 
    50777 > show to_show_a
    50778 
    50779 > show #6.1/a:2601-2603 target c
    50780 
    50781 > volume zone #4.1 nearAtoms to_show_a
    50782 
    50783 > hide #6.1
    50784 
    50785 > ~cartoon
    50786 
    50787 > name to_show_a #6.1/a:2602/Y:75-76/v:2-4
    50788 
    50789 > show to_show_a
    50790 
    50791 > show #6.1/a:2601-2603/Y:74-76 target c
    50792 
    50793 > volume zone #4.1 nearAtoms to_show_a
    50794 
    50795 > hide #6.1
    50796 
    50797 > ~cartoon
    50798 
    50799 > name to_show_a #6.1/a:2602/Y:75-76/v:2-4
    50800 
    50801 > show to_show_a
    50802 
    50803 > show #6.1/a:2601-2603/Y:74-76/v:2-5 target c
    50804 
    50805 > volume zone #4.1 nearAtoms to_show_a
    50806 
    50807 > hide #6.1
    50808 
    50809 > ~cartoon
    50810 
    50811 > name to_show_a #6.1/a:2602/Y:75-76/v:2-4
    50812 
    50813 > show to_show_a
    50814 
    50815 > show #6.1/a:2601-2603/Y:74-76/v:2-5 target c
    50816 
    50817 > volume zone #4.1 nearAtoms to_show_a range 2
    50818 
    50819 > hide #6.1
    50820 
    50821 > ~cartoon
    50822 
    50823 > name to_show_a #6.1/a:2602/Y:75-76/v:2-4
    50824 
    50825 > show to_show_a
    50826 
    50827 > show #6.1/a:2601-2603/Y:74-76/v:2-5 target a
    50828 
    50829 > volume zone #4.1 nearAtoms to_show_a range 2
    50830 
    50831 > hide #6.1
    50832 
    50833 > ~cartoon
    50834 
    50835 > show #6.1/a:2601-2603/Y:74-76/v:2-5
    50836 
    50837 > volume zone #4.1 range 2 nearAtoms #6.1/a:2602/Y:75-76/v:2-4
    50838 
    50839 > hide #6.1
    50840 
    50841 > ~cartoon
    50842 
    50843 > show #6.1/a:2601-2603/Y:74-76/v:2-5
    50844 
    50845 > volume zone #4.1 range 2 nearAtoms #6.1/a:2602/Y:75-76/v:2-3
    50846 
    50847 > hide #6.1
    50848 
    50849 > ~cartoon
    50850 
    50851 > show #6.1/a:2601-2603/Y:74-76/v:2-5
    50852 
    50853 > volume zone #4.1 range 2 nearAtoms #6.1/a:2602/Y:76/v:2-3
    50854 
    50855 > hide #6.1
    50856 
    50857 > ~cartoon
    50858 
    50859 > show #6.1/a:2601-2603/Y:74-76/v:2-5
    50860 
    50861 > volume zone #4.1 range 2 nearAtoms #6.1/a:2602/v:2-3 | #6.1/Y:76 sidechain
    50862 
    50863 Expected a keyword 
    50864 
    50865 > hide #6.1
    50866 
    50867 > ~cartoon
    50868 
    50869 > show #6.1/a:2601-2603/Y:74-76/v:2-5
    50870 
    50871 > volume zone #4.1 range 2 nearAtoms #6.1/Y:76 sidechain
    50872 
    50873 Expected a keyword 
    50874 
    50875 > hide #6.1
    50876 
    50877 > ~cartoon
    50878 
    50879 > show #6.1/a:2601-2603/Y:74-76/v:2-5
    50880 
    50881 > volume zone #4.1 range 2 nearAtoms #6.1/Y:76 & sidechain
    50882 
    50883 > hide #6.1
    50884 
    50885 > ~cartoon
    50886 
    50887 > show #6.1/a:2601-2603/Y:74-76/v:2-5
    50888 
    50889 > volume zone #4.1 range 2 nearAtoms #6.1/a:2602/v:2-3 | #6.1/Y:76 & sidechain
    50890 
    50891 > hide #6.1
    50892 
    50893 > ~cartoon
    50894 
    50895 > show #6.1/a:2601-2603/Y:74-76/v:2-5
    50896 
    50897 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/a:2602/Y:76 & sidechain
    50898 
    50899 > hide #6.1#1.2
    50900 
    50901 > ~cartoon
    50902 
    50903 > show #6.1/a:2601-2603/Y:74-76/v:2-5
    50904 
    50905 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/a:2602/Y:76 & sidechain
    50906 
    50907 > show #1.2/Y:76
    50908 
    50909 > view matrix
    50910 
    50911 view matrix camera
    50912 0.22239,0.85399,0.47035,156.1,-0.59722,-0.26201,0.75808,209.36,0.77063,-0.44949,0.45176,156 
    50913 view matrix models
    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#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0 
    50915  
    50916 
    50917 > show #1.2/Y:76
    50918 
    50919 > show #!1.2 models
    50920 
    50921 > hide #!1.2 models
    50922 
    50923 > show #!1.2 models
    50924 
    50925 > hide #!1.2 models
    50926 
    50927 > show #1.2
    50928 
    50929 > hide #1.2
    50930 
    50931 > show #!1.2 models
    50932 
    50933 > show #1.2/Y:76
    50934 
    50935 > show #1.2/Y:74-76
    50936 
    50937 > show #1.2/Y:71-76
    50938 
    50939 > hide #6.1#1.2
    50940 
    50941 > ~cartoon
    50942 
    50943 > show #6.1/a:2601-2603/Y:73-76/v:2-5
    50944 
    50945 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/a:2602/Y:76 & sidechain
    50946 
    50947 > show #1.2/Y:73-76
    50948 
    50949 > hide #6.1#1.2
    50950 
    50951 > ~cartoon
    50952 
    50953 > show #6.1/a:2601-2603/Y:72-76/v:2-5
    50954 
    50955 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/a:2602/Y:76 & sidechain
    50956 
    50957 > show #1.2/Y:72-76
    50958 
    50959 > hide #6.1#1.2
    50960 
    50961 > ~cartoon
    50962 
    50963 > show #6.1/a:2601-2603/Y:72-76/v:2-5
    50964 
    50965 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/a:2602/Y:76 & sidechain
    50966 
    50967 > show #1.2/Y:72-76
    50968 
    50969 > show #1.2/Y:72-76#6.1/Y:72-76 target c
    50970 
    50971 > cartoon suppressBackboneDisplay false
    50972 
    50973 > transparency 60 target c
    50974 
    50975 > cartoon suppressBackboneDisplay false
    50976 
    50977 > transparency 80 target c
    50978 
    50979 > hide #6.1#1.2
    50980 
    50981 > ~cartoon
    50982 
    50983 > show #6.1/a:2601-2603/Y:72-76/v:2-5
    50984 
    50985 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/a:2602/Y:76 & sidechain
    50986 
    50987 > show #1.2/Y:72-76
    50988 
    50989 > show #1.2/Y:72-76#6.1/Y:72-76 target c
    50990 
    50991 > hide #6.1#1.2
    50992 
    50993 > ~cartoon
    50994 
    50995 > show #6.1/a:2601-2603/Y:72-76/v:2-5
    50996 
    50997 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/a:2602/Y:76 & sidechain
    50998 
    50999 > show #1.2/Y:72-76
    51000 
    51001 > show #1.2/Y:72-76#6.1/Y:72-76 target c
    51002 
    51003 > color #1.2 white
    51004 
    51005 > hide #6.1#1.2
    51006 
    51007 > ~cartoon
    51008 
    51009 > show #6.1/a:2601-2603/Y:72-76/v:2-5
    51010 
    51011 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/a:2602/Y:76 & sidechain
    51012 
    51013 > show #1.2/Y:72-76
    51014 
    51015 > show #1.2/Y:72-76#6.1/Y:72-76 target c
    51016 
    51017 > color #1.2 white
    51018 
    51019 > hide #1.2.3
    51020 
    51021 > hide #6.1#1.2
    51022 
    51023 > ~cartoon
    51024 
    51025 > show #6.1/a:2601-2603/Y:72-76/v:2-5
    51026 
    51027 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/a:2602/Y:76 & sidechain
    51028 
    51029 > show #1.2/Y:72-76
    51030 
    51031 > show #1.2/Y:72-76#6.1/Y:72-76 target c
    51032 
    51033 > color #1.2 white
    51034 
    51035 > hide #1.2.2
    51036 
    51037 > hide #6.1#1.2
    51038 
    51039 > ~cartoon
    51040 
    51041 > show #6.1/a:2601-2603/Y:72-76/v:2-5
    51042 
    51043 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/a:2602/Y:76 & sidechain
    51044 
    51045 > show #1.2/Y:72-76
    51046 
    51047 > color #1.2 white
    51048 
    51049 > hide #1.2.2
    51050 
    51051 > hide #6.1#1.2
    51052 
    51053 > ~cartoon
    51054 
    51055 > show #6.1/a:2601-2603/Y:72-76/v:2-5
    51056 
    51057 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/a:2602/Y:76 & sidechain
    51058 
    51059 > show #1.2/Y:72-76
    51060 
    51061 > color #1.2 white
    51062 
    51063 > hide #1.2.2
    51064 
    51065 > show #1.2/Y:72-76#6.1/Y:72-76 target c
    51066 
    51067 > volume #4.1 level 0.5
    51068 
    51069 > show #!5.1 models
    51070 
    51071 > hide #!5.1 models
    51072 
    51073 > show #!4.1 models
    51074 
    51075 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/a:2602/Y:76
    51076 
    51077 > ~cartoon
    51078 
    51079 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-5 | #6.1/a:2602/Y:76
    51080 
    51081 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-4 | #6.1/a:2602/Y:76
    51082 
    51083 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-4 | #6.1/a:2602/Y:75-76
    51084 
    51085 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-4 | #6.1/a:2602/Y:76 | #6.1/Y:75 & sidechain
    51086 
    51087 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-4 | #6.1/Y:76 | #6.1/a:2602/Y:75 & sidechain
    51088 
    51089 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-5 | #6.1/Y:76 | #6.1/a:2602/Y:75 & sidechain
    51090 
    51091 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-4 | #6.1/Y:76 | #6.1/a:2602/Y:75 & sidechain
    51092 
    51093 > hide #!1.2 models
    51094 
    51095 > show #!1.2 models
    51096 
    51097 > hide #!1.2 models
    51098 
    51099 > show #!1.2 models
    51100 
    51101 > transparency #1.2 50
    51102 
    51103 > transparency #1.2 50 target a
    51104 
    51105 > color #1.2/Y maroon
    51106 
    51107 > transparency #1.2 80 target a
    51108 
    51109 > transparency #1.2 90 target a
    51110 
    51111 > transparency #1.2 95 target a
    51112 
    51113 > view matrix
    51114 
    51115 view matrix camera
    51116 0.36563,0.76249,0.53378,157.06,-0.22955,-0.4819,0.84563,212.87,0.90201,-0.43171,-0.0011696,135.63 
    51117 view matrix models
    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#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0 
    51119  
    51120 
    51121 > clip list
    51122 
    51123 Using 2 clip planes: 
    51124 near offset -19.642, axis -0.534,-0.846,0.001, point 142.3,189.1,135.7) 
    51125 far offset 6.0401, axis 0.534,0.846,-0.001, point 128.6,167.4,135.7) 
    51126 
    51127 > ~clip
    51128 
    51129 > clip near -19.642 far 6.0401
    51130 
    51131 > ~clip
    51132 
    51133 > clip near point 142.3,189.1,135.7 far point 128.6,167.4,135.7
    51134 
    51135 Invalid "near" argument: Expected 'off' or a number 
    51136 
    51137 > ~clip
    51138 
    51139 > clip near -19.642 far 6.0401
    51140 
    51141 > save /Users/dalar193/Desktop/tmp.png supersample 4
    51142 
    51143 > volume #4.1 level 0.55
    51144 
    51145 > volume #4.1 level 0.6
    51146 
    51147 > volume #4.1 level 0.65
    51148 
    51149 > volume #4.1 level 0.45
    51150 
    51151 > volume #4.1 level 0.5
    51152 
    51153 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-4 | #6.1/Y:74-76 | #6.1/a:2602/Y:75 & sidechain
    51154 
    51155 > view matrix camera
    51156 > 0.36563,0.76249,0.53378,157.06,-0.22955,-0.4819,0.84563,212.87,0.90201,-0.43171,-0.0011696,135.63
    51157 
    51158 > color #6.1/a powder blue
    51159 
    51160 > color #6.1/a light steel blue
    51161 
    51162 > color #6.1/a cornflower blue
    51163 
    51164 > color #6.1/a royal blue
    51165 
    51166 > color #6.1/a steel blue
    51167 
    51168 [Repeated 1 time(s)]
    51169 
    51170 > color #6.1/v medium slate blue
    51171 
    51172 > color #6.1/a steel blue
    51173 
    51174 > color #6.1/v medium purple
    51175 
    51176 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #a281e6ff
    51177 
    51178 [Repeated 1 time(s)]
    51179 
    51180 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #a788e6ff
    51181 
    51182 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #ae92e6ff
    51183 
    51184 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #b59de6ff
    51185 
    51186 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #bca7e6ff
    51187 
    51188 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #beabe6ff
    51189 
    51190 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #b8a2e6ff
    51191 
    51192 [Repeated 1 time(s)]
    51193 
    51194 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #a390ccff
    51195 
    51196 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #796b97ff
    51197 
    51198 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #6d5f87ff
    51199 
    51200 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #7c6d9aff
    51201 
    51202 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #8878aaff
    51203 
    51204 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #9381b7ff
    51205 
    51206 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #9785bdff
    51207 
    51208 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #9e8bc5ff
    51209 
    51210 [Repeated 1 time(s)]
    51211 
    51212 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #917fb5ff
    51213 
    51214 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #907fb5ff
    51215 
    51216 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #8670b5ff
    51217 
    51218 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #866fb5ff
    51219 
    51220 [Repeated 1 time(s)]
    51221 
    51222 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #8066b5ff
    51223 
    51224 [Repeated 2 time(s)]
    51225 
    51226 > color #6.1/a steel blue
    51227 
    51228 > color #6.1/v #8066B5
    51229 
    51230 > color #6.1 maroon
    51231 
    51232 > color #6.1/a steel blue
    51233 
    51234 > color #6.1/v #8066B5
    51235 
    51236 > color #1.2/Y maroon
    51237 
    51238 > color #6.1/Y maroon
    51239 
    51240 > color #6.1/a steel blue
    51241 
    51242 > color #6.1/v #8066B5
    51243 
    51244 > color #1.2/Y maroon
    51245 
    51246 > color #6.1/Y maroon
    51247 
    51248 > color #6.1/a steel blue
    51249 
    51250 > color #6.1/v #8066B5
    51251 
    51252 > transparency #1.2 95 target a
    51253 
    51254 > color #1.2/Y maroon
    51255 
    51256 > color #6.1/Y maroon
    51257 
    51258 > color #6.1/a steel blue
    51259 
    51260 > color #6.1/v #8066B5
    51261 
    51262 > transparency #1.2 95 target a
    51263 
    51264 > volume color gray
    51265 
    51266 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #89b6dbff
    51267 
    51268 [Repeated 1 time(s)]
    51269 
    51270 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #80aacdff
    51271 
    51272 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #7ca4c6ff
    51273 
    51274 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #7ba3c4ff
    51275 
    51276 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #79a1c2ff
    51277 
    51278 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #79a1c1ff
    51279 
    51280 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #779fbfff
    51281 
    51282 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #789fbfff
    51283 
    51284 [Repeated 1 time(s)]
    51285 
    51286 > color #1.2/Y maroon
    51287 
    51288 > color #6.1/Y maroon
    51289 
    51290 > color #6.1/a 789FBF; color #6.1/v #8066B5;transparency #1.2 95 target a; vol
    51291 > color gray
    51292 
    51293 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    51294 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    51295 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    51296 
    51297 > color #1.2/Y maroon
    51298 
    51299 > color #6.1/Y maroon
    51300 
    51301 > color #6.1/a #789FBF
    51302 
    51303 > color #6.1/v #8066B5
    51304 
    51305 > transparency #1.2 95 target a
    51306 
    51307 > volume color gray
    51308 
    51309 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #8066b5ff
    51310 
    51311 [Repeated 1 time(s)]
    51312 
    51313 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #866fb5ff
    51314 
    51315 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #8b77b5ff
    51316 
    51317 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #856cb5ff
    51318 
    51319 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #856db5ff
    51320 
    51321 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #8770b5ff
    51322 
    51323 [Repeated 1 time(s)]
    51324 
    51325 > color #1.2/Y maroon
    51326 
    51327 > color #6.1/Y maroon
    51328 
    51329 > color #6.1/a #789FBF
    51330 
    51331 > color #6.1/v #8770B5
    51332 
    51333 > transparency #1.2 95 target a
    51334 
    51335 > volume color gray
    51336 
    51337 > color #1.2#4.1#6.1.1#!1-6,10-14,20-23,25#!6.1 #000efeff
    51338 
    51339 > color #1.2/Y maroon
    51340 
    51341 > color #6.1/Y maroon
    51342 
    51343 > color #6.1/a #789FBF
    51344 
    51345 > color #6.1/v #8770B5
    51346 
    51347 > transparency #1.2 95 target a
    51348 
    51349 > volume color gray
    51350 
    51351 > color #1.2/Y maroon
    51352 
    51353 > color #6.1/Y maroon
    51354 
    51355 > color #6.1/a #789FBF
    51356 
    51357 > color #6.1/v #8770B5
    51358 
    51359 > transparency #1.2 90 target a
    51360 
    51361 > volume color gray
    51362 
    51363 > color #1.2/Y maroon
    51364 
    51365 > color #6.1/Y maroon
    51366 
    51367 > color #6.1/a #789FBF
    51368 
    51369 > color #6.1/v #8770B5
    51370 
    51371 > volume color gray
    51372 
    51373 > color #1.2/Y maroon
    51374 
    51375 > color #6.1/Y maroon
    51376 
    51377 > color #6.1/a #789FBF
    51378 
    51379 > color #6.1/v #8770B5
    51380 
    51381 > transparency #1.2 90 target a
    51382 
    51383 > volume color gray
    51384 
    51385 > hide #!1.2 models
    51386 
    51387 > show #!1.2 models
    51388 
    51389 > hide #!1.2 models
    51390 
    51391 > show #!1.2 models
    51392 
    51393 > hide #!1.2 models
    51394 
    51395 > show #!1.2 models
    51396 
    51397 > hide #!1.2 models
    51398 
    51399 > show #!1.2 models
    51400 
    51401 > hide #!1.2 models
    51402 
    51403 > show #!1.2 models
    51404 
    51405 > hide #!1.2 models
    51406 
    51407 > show #!1.2 models
    51408 
    51409 > hide #!1.2 models
    51410 
    51411 > lighting soft
    51412 
    51413 > lighting full
    51414 
    51415 > lighting simple
    51416 
    51417 > lighting full
    51418 
    51419 [Repeated 1 time(s)]
    51420 
    51421 > lighting simple
    51422 
    51423 > lighting full
    51424 
    51425 > save /Users/dalar193/Desktop/tmp.png supersample 4
    51426 
    51427 > windowsize 800 600
    51428 
    51429 > lighting full
    51430 
    51431 [Repeated 1 time(s)]
    51432 
    51433 > lightning full
    51434 
    51435 Unknown command: lightning full 
    51436 
    51437 > windowsize 800 600
    51438 
    51439 > save /Users/dalar193/Desktop/tmp.png width 800 height 600 supersample 4
    51440 
    51441 > lighting full
    51442 
    51443 > save /Users/dalar193/Desktop/tmp.png width 800 height 600 supersample 4
    51444 
    51445 > show #!1.2 models
    51446 
    51447 > save /Users/dalar193/Desktop/tmp.png width 800 height 600 supersample 4
    51448 
    51449 [Repeated 1 time(s)]
    51450 
    51451 > show #6.1/a:2601-2603/Y:72-76/v:2-6
    51452 
    51453 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:76 | #6.1/a:2602/Y:75 & sidechain
    51454 
    51455 > save /Users/dalar193/Desktop/tmp.png width 800 height 600 supersample 4
    51456 
    51457 [Repeated 1 time(s)]
    51458 
    51459 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:75-76 | #6.1/a:2602/Y:45 & sidechain
    51460 
    51461 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:76 | #6.1/a:2602/Y:75 & sidechain
    51462 
    51463 > view matrix
    51464 
    51465 view matrix camera
    51466 0.33419,0.64191,0.69012,165.63,-0.30645,-0.61842,0.72364,208.44,0.89129,-0.45331,-0.0099557,135.91 
    51467 view matrix models
    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#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0 
    51469  
    51470 
    51471 > clip list
    51472 
    51473 Using 2 clip planes: 
    51474 near offset -17.283, axis -0.690,-0.724,0.010, point 144.8,184.2,137.4) 
    51475 far offset 6.1765, axis 0.690,0.724,-0.010, point 128.6,167.2,137.6) 
    51476 
    51477 > view matrix camera
    51478 > 0.33419,0.64191,0.69012,165.63,-0.30645,-0.61842,0.72364,208.44,0.89129,-0.45331,-0.0099557,135.91
    51479 
    51480 > show #6.1/a:2601-2603/Y:72-76/v:2-6
    51481 
    51482 > show #1.2/Y:72-76
    51483 
    51484 > show #1.2/Y:72-76#6.1/Y:72-76 target c
    51485 
    51486 > color #1.2 white
    51487 
    51488 > hide #1.2.2
    51489 
    51490 > ~cartoon #6.1#1.2
    51491 
    51492 > hide #6.1#1.2
    51493 
    51494 > ~cartoon #6.1#1.2
    51495 
    51496 > show #6.1/a:2601-2603/Y:72-76/v:2-6
    51497 
    51498 > show #1.2/Y:72-76
    51499 
    51500 > show #1.2/Y:72-76#6.1/Y:72-76 target c
    51501 
    51502 > color #1.2 maroon
    51503 
    51504 > hide #1.2.2
    51505 
    51506 > hide #6.1#1.2
    51507 
    51508 > ~cartoon #6.1#1.2
    51509 
    51510 > show #6.1/a:2601-2603/Y:72-76/v:2-6
    51511 
    51512 > show #1.2/Y:72-76
    51513 
    51514 > color #1.2 maroon
    51515 
    51516 > hide #1.2.2
    51517 
    51518 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:76 | #6.1/a:2602/Y:75 & sidechain
    51519 
    51520 > volume #4.1 level 0.5
    51521 
    51522 > transparency #1.2 95 target a
    51523 
    51524 > transparency #1.2 90 target a
    51525 
    51526 > color #1.2/Y maroon
    51527 
    51528 > color #6.1/Y maroon
    51529 
    51530 > color #6.1/a #789FBF
    51531 
    51532 > color #6.1/v #8770B5
    51533 
    51534 > transparency #1.2 90 target a
    51535 
    51536 > volume color gray
    51537 
    51538 > color #1.2/Y maroon
    51539 
    51540 > color #6.1/Y maroon
    51541 
    51542 > color #6.1/a #8770B5
    51543 
    51544 > color #6.1/v #789FBF
    51545 
    51546 > transparency #1.2 90 target a
    51547 
    51548 > volume color gray
    51549 
    51550 > save /Users/dalar193/Desktop/tmp.png width 800 height 600 supersample 4
    51551 
    51552 > show #6.1/a:2551-2557
    51553 
    51554 > show #6.1/a:2551-2557 target c
    51555 
    51556 > show #6.1/a:2550-2558 target c
    51557 
    51558 > show #6.1/Y:73-76 target c
    51559 
    51560 > hide #6.1/a:2603
    51561 
    51562 > transparency #6.1 70 target c
    51563 
    51564 > transparency #6.1 60 target c
    51565 
    51566 > transparency #6.1 70 target c
    51567 
    51568 > show #6.1/a:2550-2558 target c
    51569 
    51570 > color #6.1/a:2550-2558 orange
    51571 
    51572 > color #6.1/a:2550-2558 coral
    51573 
    51574 > color #6.1/a:2550-2558 dark orange
    51575 
    51576 > color #6.1/a:2550-2558 light salmon
    51577 
    51578 > color #6.1/a:2550-2558 forest green
    51579 
    51580 > color #6.1/a:2550-2558 sea green
    51581 
    51582 > color #6.1/a:2550-2558 medium sea green
    51583 
    51584 > color #6.1/a:2550-2558 dark sea green
    51585 
    51586 > color #6.1/a:2550-2558 cadet blue
    51587 
    51588 > show #6.1/a:2580-2584 target ac
    51589 
    51590 > show #6.1/a:2580-2586 target ac
    51591 
    51592 > show #6.1/a:2580-2585 target ac
    51593 
    51594 > ~show #6.1/a:2580-2585 target ac
    51595 
    51596 > ~show #6.1/a:2580-2586 target ac
    51597 
    51598 > show #6.1/a:2580-2585 target ac
    51599 
    51600 > color #6.1/a:2580-2585 crimson
    51601 
    51602 > hide #!1.2 models
    51603 
    51604 > show #!1.2 models
    51605 
    51606 > view matrix
    51607 
    51608 view matrix camera
    51609 -0.82773,0.56075,0.02019,139.21,0.27475,0.43641,-0.85678,115.93,-0.48925,-0.70362,-0.51531,111.22 
    51610 view matrix models
    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#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0 
    51612  
    51613 
    51614 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:74-76 | #6.1/a:2602/Y:75 & sidechain
    51615 
    51616 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:73-76 | #6.1/a:2602/Y:75 & sidechain
    51617 
    51618 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2602/Y:75 & sidechain
    51619 
    51620 > volume zone #4.1 range 3 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2602/Y:75 & sidechain
    51621 
    51622 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2602/Y:75 & sidechain
    51623 
    51624 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2602/Y:75 & sidechain | #6.1/a:2551-2557 & sideonly
    51625 
    51626 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2602/Y:75 & sidechain | #6.1/a:2551-2557
    51627 
    51628 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2602/Y:75&sidechain | #6.1/a:2551-2557
    51629 
    51630 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | (#6.1/a:2602/Y:75&sidechain) | #6.1/a:2551-2557
    51631 
    51632 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2551-2557
    51633 
    51634 > ~cartoon
    51635 
    51636 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2551-2557 | (#6.1/a:2602&sideonly)
    51637 
    51638 > hide #!1.2 models
    51639 
    51640 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2551-2557 | (#6.1/a:2602&sideonly) | #6.1/a:2580-2585
    51641 
    51642 > show #6.1
    51643 
    51644 > show #6.1/a:3019
    51645 
    51646 > ~show #6.1/a:3019
    51647 
    51648 > ~show #6.1
    51649 
    51650 > show #6.1/a:2551-2557
    51651 
    51652 > show #6.1/a:2550-2558 target c
    51653 
    51654 > show #6.1/Y:73-76 target c
    51655 
    51656 > hide #6.1/a:2603
    51657 
    51658 > transparency #6.1 70 target c
    51659 
    51660 > color #6.1/a:2550-2558 cadet blue
    51661 
    51662 > show #6.1/a:2580-2585 target ac
    51663 
    51664 > color #6.1/a:2580-2585 crimson
    51665 
    51666 > volume #4.1 level 0.5
    51667 
    51668 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2551-2557 | (#6.1/a:2602&sideonly) | #6.1/a:2580-2585
    51669 
    51670 > ~cartoon
    51671 
    51672 > show #6.1/a:2602-2603
    51673 
    51674 > ~show #6.1/a:2602-2603
    51675 
    51676 > show #6.1/a:2602
    51677 
    51678 > show #6.1/a:2602 & sidechain
    51679 
    51680 > ~show #6.1/a:2602
    51681 
    51682 > show #6.1/a:2602 & sidechain
    51683 
    51684 > show #6.1/a:2601
    51685 
    51686 > ~show #6.1/a:2601
    51687 
    51688 > show #6.1/a:2603
    51689 
    51690 > ~show #6.1/a:2603
    51691 
    51692 > show #6.1/a:2602
    51693 
    51694 > show #6.1/a:2602&sideonly | #6.1/a:2602@C5',O3'
    51695 
    51696 > ~show #6.1/a:2602
    51697 
    51698 > show #6.1/a:2602&sideonly | #6.1/a:2602@C5',O3'
    51699 
    51700 > show #6.1/a:2602&sidechain | #6.1/a:2602@C5',O3'
    51701 
    51702 > ~show #6.1/a:2602&sidechain | #6.1/a:2602@C5',O3'
    51703 
    51704 > show #6.1/a:2602&sidechain | #6.1/a:2602@C5'
    51705 
    51706 > show #6.1/a:2602&sidechain | #6.1/a:2602@C5',O5'
    51707 
    51708 > show #6.1/a:2602&sidechain | #6.1/a:2602@C5',O5',O3'
    51709 
    51710 > ~show #6.1/a:2602&sidechain | #6.1/a:2602@C5',O5',O3'
    51711 
    51712 > show #6.1/a:2602&sidechain | #6.1/a:2602@C5',O3'
    51713 
    51714 > show #6.1/Y:72-76/v:2-6
    51715 
    51716 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2551-2557 | (#6.1/a:2602&sidechain) | #6.1/a:2580-2585
    51717 
    51718 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2551-2557 | (#6.1/a:2602&sidechain) | #6.1/a:2580-2585 | #6.1/a:3019
    51719 
    51720 > show #6.1/a:2580-2585,3019
    51721 
    51722 > color #6.1/a:2580-2585,3019 crimson
    51723 
    51724 > show #6.1/a:2550-2558
    51725 
    51726 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2550-2558 | (#6.1/a:2602&sidechain) | #6.1/a:2580-2585 | #6.1/a:3019
    51727 
    51728 > lighting soft
    51729 
    51730 > lighting full
    51731 
    51732 > show #6.1/a:1672
    51733 
    51734 > show #6.1/a:1671-1673
    51735 
    51736 > show #1.12/a:1671-1673
    51737 
    51738 > show #!1.12 models
    51739 
    51740 > hide #1.12
    51741 
    51742 > show #1.12/a:1671-1673
    51743 
    51744 > show #1.12/a:1670-1674
    51745 
    51746 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2550-2558 | (#6.1/a:2602&sidechain) | #6.1/a:2580-2585 | #6.1/a:3019 | #1.12/a:1671
    51747 
    51748 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2550-2558 | (#6.1/a:2602&sidechain) | #6.1/a:2580-2585 | #6.1/a:3019 | #1.12/a:1672
    51749 
    51750 > view matrix camera
    51751 > -0.82773,0.56075,0.02019,139.21,0.27475,0.43641,-0.85678,115.93,-0.48925,-0.70362,-0.51531,111.22
    51752 
    51753 > view matrix
    51754 
    51755 view matrix camera
    51756 -0.80327,0.55343,-0.22016,125.45,0.45245,0.3266,-0.82984,121.86,-0.38735,-0.76617,-0.51276,115.69 
    51757 view matrix models
    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#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0 
    51759  
    51760 
    51761 > color #6.1/a:2549-2559 cadet blue
    51762 
    51763 > color #6.1/a:2602 #8770B5
    51764 
    51765 > color #6.1/a:2580-2585,3019 crimson
    51766 
    51767 > volume #4.1 level 0.5
    51768 
    51769 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-3 | #6.1/Y:72-76 | #6.1/a:2549-2559 | (#6.1/a:2602&sidechain) | #6.1/a:2580-2585 | #6.1/a:3019 | #1.12/a:1672
    51770 
    51771 > color #1.12 gray
    51772 
    51773 > view matrix
    51774 
    51775 view matrix camera
    51776 -0.82811,0.53756,-0.1589,128.3,0.3332,0.24409,-0.91072,112.05,-0.45078,-0.80711,-0.38126,121.73 
    51777 view matrix models
    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#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0 
    51779  
    51780 
    51781 > view matrix camera
    51782 > -0.80327,0.55343,-0.22016,125.45,0.45245,0.3266,-0.82984,121.86,-0.38735,-0.76617,-0.51276,115.69
    51783 
    51784 > view matrix camera
    51785 > -0.82811,0.53756,-0.1589,128.3,0.3332,0.24409,-0.91072,112.05,-0.45078,-0.80711,-0.38126,121.73
    51786 
    51787 > view matrix
    51788 
    51789 view matrix camera
    51790 -0.82811,0.53756,-0.1589,128.3,0.3332,0.24409,-0.91072,112.05,-0.45078,-0.80711,-0.38126,121.73 
    51791 view matrix models
    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#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0 
    51793  
    51794 
    51795 > view matrix
    51796 
    51797 view matrix camera
    51798 -0.77481,0.61188,-0.1589,128.12,0.35436,0.21221,-0.91072,112.16,-0.52353,-0.76194,-0.38126,121.53 
    51799 view matrix models
    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#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0 
    51801  
    51802 
    51803 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-5 | #6.1/Y:72-76 | #6.1/a:2549-2559 | (#6.1/a:2602&sidechain) | #6.1/a:2580-2585 | #6.1/a:3019 | #1.12/a:1672
    51804 
    51805 > hide #!6.1 models
    51806 
    51807 > hide #!4.1 models
    51808 
    51809 > show #!1.1 models
    51810 
    51811 > show #!1.2 models
    51812 
    51813 > hide #!1.2 models
    51814 
    51815 > hide #!1.1 models
    51816 
    51817 > ~transparency #1.2
    51818 
    51819 Unknown command: ~transparency #1.2 
    51820 
    51821 > ~transparancy #1.2
    51822 
    51823 Unknown command: ~transparancy #1.2 
    51824 
    51825 > transparancy #1.2
    51826 
    51827 Unknown command: transparancy #1.2 
    51828 
    51829 > transparency #1.2 0
    51830 
    51831 > show #!1.2 models
    51832 
    51833 > hide #!1.12 models
    51834 
    51835 > hide #1.2
    51836 
    51837 > show #1.2/a:2550-2558
    51838 
    51839 > show #1.2/a:2602&sidechain | #1.2/a:2602@C5',O3'
    51840 
    51841 > show #1.2/a:2580-2585,3019
    51842 
    51843 > show #1.2/Y:72-76/v:2-6
    51844 
    51845 > show #1.2/a:1670-1674
    51846 
    51847 > color #1.2/a:2549-2559 cadet blue
    51848 
    51849 > color #1.2/a:2602 #8770B5
    51850 
    51851 > color #1.2/a:2580-2585,3019 crimson
    51852 
    51853 > color #1.12 gray
    51854 
    51855 > volume zone #1.1 range 2 nearAtoms #1.2/v:2-5 | #1.2/Y:72-76 | #1.2/a:2549-2559 | (#1.2/a:2602&sidechain) | #1.2/a:2580-2585 | #1.2/a:3019 | #1.2/a:1672
    51856 
    51857 > transparency #1.2 0
    51858 
    51859 > transparency #1.2 0 target a
    51860 
    51861 > show #!1.1 models
    51862 
    51863 > volume #1.1 level 0.012
    51864 
    51865 > volume #1.1 level 0.011
    51866 
    51867 > volume #1.1 level 0.014
    51868 
    51869 > volume #1.1 level 0.013
    51870 
    51871 > volume #1.1 level 0.014
    51872 
    51873 > volume #1.1 level 0.015
    51874 
    51875 [Repeated 1 time(s)]
    51876 
    51877 > volume zone #1.1 range 2 nearAtoms #1.2/v:2-5 | #1.2/Y:72-76 | #1.2/a:2549-2559 | (#1.2/a:2602&sidechain) | #1.2/a:2580-2585 | #1.2/a:3019 | #1.2/a:1672
    51878 
    51879 > show #!1.12 models
    51880 
    51881 > show #!1.12#!4.1 models
    51882 
    51883 > show #!1.12#!4.1#!6.1 models
    51884 
    51885 > hide #!1.12#!4.1#!6.1 models
    51886 
    51887 > hide #!1.1#!1.2 models
    51888 
    51889 > show #!1.12#!4.1#!6.1 models
    51890 
    51891 > volume #4.1 level 0.5
    51892 
    51893 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-5 | #6.1/Y:72-76 | #6.1/a:2549-2559 | (#6.1/a:2602&sideonly) | #6.1/a:2580-2585 | #6.1/a:3019 | #1.12/a:1672
    51894 
    51895 > hide #!1.1#!1.2 models
    51896 
    51897 > hide #!1.12#!4.1#!6.1 models
    51898 
    51899 > show #!1.12#!4.2#!6.2 models
    51900 
    51901 > show #6.2/a:2550-2558
    51902 
    51903 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
    51904 
    51905 > show #6.2/a:2580-2585,3019
    51906 
    51907 > show #6.2/Y:72-76/v:2-6
    51908 
    51909 > show #1.12/a:1670-1674
    51910 
    51911 > color #6.2/a:2549-2559 cadet blue
    51912 
    51913 > color #6.2/a:2602 #8770B5
    51914 
    51915 > color #6.2/a:2580-2585,3019 crimson
    51916 
    51917 > color #1.12 gray
    51918 
    51919 > volume #4.2 level 0.5
    51920 
    51921 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | #6.2/a:2549-2559 | (#6.2/a:2602&sideonly) | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    51922 
    51923 > hide #!1.12#!4.2#!6.2 models
    51924 
    51925 > show #!1.12#!4.2#!6.2 models
    51926 
    51927 > show #6.2/a:2550-2558
    51928 
    51929 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
    51930 
    51931 > show #6.2/a:2580-2585,3019
    51932 
    51933 > show #6.2/Y:72-76/v:2-6
    51934 
    51935 > show #1.12/a:1670-1674
    51936 
    51937 > color #6.2/a:2549-2559 cadet blue
    51938 
    51939 > color #6.2/a:2602 #8770B5
    51940 
    51941 > color #6.2/a:2580-2585,3019 crimson
    51942 
    51943 > color #1.12 gray
    51944 
    51945 > volume #4.2 level 0.5
    51946 
    51947 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | #6.2/a:2549-2559 | (#6.2/a:2602&sideonly) | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    51948 
    51949 > volume #4.2 level 0.3
    51950 
    51951 > volume #4.2 level 0.5
    51952 
    51953 > volume #4.2 level 0.3
    51954 
    51955 > hide #!6.2 models
    51956 
    51957 > hide #!4.2 models
    51958 
    51959 > show #!1.12#!4.1#!6.1 models
    51960 
    51961 > show #6.1/a:2550-2558
    51962 
    51963 > show #6.1/a:2602&sidechain | #6.1/a:2602@C5',O3'
    51964 
    51965 > show #6.1/a:2580-2585,3019
    51966 
    51967 > show #6.1/Y:72-76/v:2-6
    51968 
    51969 > show #1.12/a:1670-1674
    51970 
    51971 > color #6.1/a:2549-2559 cadet blue
    51972 
    51973 > color #6.1/a:2602 #8770B5
    51974 
    51975 > color #6.1/a:2580-2585,3019 crimson
    51976 
    51977 > color #1.12 gray
    51978 
    51979 > volume #4.1 level 0.5
    51980 
    51981 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-5 | #6.1/Y:72-76 | #6.1/a:2549-2559 | (#6.1/a:2602&sideonly) | #6.1/a:2580-2585 | #6.1/a:3019 | #1.12/a:1672
    51982 
    51983 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.1.png width 800
    51984 > height 600 supersample 4
    51985 
    51986 > hide #!1.12#!4.1#!6.1 models
    51987 
    51988 > show #!1.12#!4.2#!6.2 models
    51989 
    51990 > show #6.2/a:2550-2558
    51991 
    51992 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
    51993 
    51994 > show #6.2/a:2580-2585,3019
    51995 
    51996 > show #6.2/Y:72-76/v:2-6
    51997 
    51998 > show #1.12/a:1670-1674
    51999 
    52000 > color #6.2/a:2549-2559 cadet blue
    52001 
    52002 > color #6.2/a:2602 #8770B5
    52003 
    52004 > color #6.2/a:2580-2585,3019 crimson
    52005 
    52006 > color #1.12 gray
    52007 
    52008 > volume #4.2 level 0.5
    52009 
    52010 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | #6.2/a:2549-2559 | (#6.2/a:2602&sideonly) | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    52011 
    52012 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.2.png width 800
    52013 > height 600 supersample 4
    52014 
    52015 > hide #!1.12#!4.2#!6.2 models
    52016 
    52017 > show #!1.12#!4.3#!6.3 models
    52018 
    52019 > show #6.3/a:2550-2558
    52020 
    52021 > show #6.3/a:2602&sidechain | #6.3/a:2602@C5',O3'
    52022 
    52023 > show #6.3/a:2580-2585,3019
    52024 
    52025 > show #6.3/Y:72-76/v:2-6
    52026 
    52027 > show #1.12/a:1670-1674
    52028 
    52029 > color #6.3/a:2549-2559 cadet blue
    52030 
    52031 > color #6.3/a:2602 #8770B5
    52032 
    52033 > color #6.3/a:2580-2585,3019 crimson
    52034 
    52035 > color #1.12 gray
    52036 
    52037 > volume #4.3 level 0.5
    52038 
    52039 > volume zone #4.3 range 2 nearAtoms #6.3/v:2-5 | #6.3/Y:72-76 | #6.3/a:2549-2559 | (#6.3/a:2602&sideonly) | #6.3/a:2580-2585 | #6.3/a:3019 | #1.12/a:1672
    52040 
    52041 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.3.png width 800
    52042 > height 600 supersample 4
    52043 
    52044 > hide #!1.12#!4.3#!6.3 models
    52045 
    52046 > show #!1.12#!4.4#!6.4 models
    52047 
    52048 > show #6.4/a:2550-2558
    52049 
    52050 > show #6.4/a:2602&sidechain | #6.4/a:2602@C5',O3'
    52051 
    52052 > show #6.4/a:2580-2585,3019
    52053 
    52054 > show #6.4/Y:72-76/v:2-6
    52055 
    52056 > show #1.12/a:1670-1674
    52057 
    52058 > color #6.4/a:2549-2559 cadet blue
    52059 
    52060 > color #6.4/a:2602 #8770B5
    52061 
    52062 > color #6.4/a:2580-2585,3019 crimson
    52063 
    52064 > color #1.12 gray
    52065 
    52066 > volume #4.4 level 0.5
    52067 
    52068 > volume zone #4.4 range 2 nearAtoms #6.4/v:2-5 | #6.4/Y:72-76 | #6.4/a:2549-2559 | (#6.4/a:2602&sideonly) | #6.4/a:2580-2585 | #6.4/a:3019 | #1.12/a:1672
    52069 
    52070 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.4.png width 800
    52071 > height 600 supersample 4
    52072 
    52073 > hide #!1.12#!4.4#!6.4 models
    52074 
    52075 > show #!1.12#!4.5#!6.5 models
    52076 
    52077 > show #6.5/a:2550-2558
    52078 
    52079 > show #6.5/a:2602&sidechain | #6.5/a:2602@C5',O3'
    52080 
    52081 > show #6.5/a:2580-2585,3019
    52082 
    52083 > show #6.5/Y:72-76/v:2-6
    52084 
    52085 > show #1.12/a:1670-1674
    52086 
    52087 > color #6.5/a:2549-2559 cadet blue
    52088 
    52089 > color #6.5/a:2602 #8770B5
    52090 
    52091 > color #6.5/a:2580-2585,3019 crimson
    52092 
    52093 > color #1.12 gray
    52094 
    52095 > volume #4.5 level 0.5
    52096 
    52097 > volume zone #4.5 range 2 nearAtoms #6.5/v:2-5 | #6.5/Y:72-76 | #6.5/a:2549-2559 | (#6.5/a:2602&sideonly) | #6.5/a:2580-2585 | #6.5/a:3019 | #1.12/a:1672
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    52099 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.5.png width 800
    52100 > height 600 supersample 4
    52101 
    52102 > hide #!1.12#!4.5#!6.5 models
    52103 
    52104 > show #!1.12#!4.6#!6.6 models
    52105 
    52106 > show #6.6/a:2550-2558
    52107 
    52108 > show #6.6/a:2602&sidechain | #6.6/a:2602@C5',O3'
    52109 
    52110 > show #6.6/a:2580-2585,3019
    52111 
    52112 > show #6.6/Y:72-76/v:2-6
    52113 
    52114 > show #1.12/a:1670-1674
    52115 
    52116 > color #6.6/a:2549-2559 cadet blue
    52117 
    52118 > color #6.6/a:2602 #8770B5
    52119 
    52120 > color #6.6/a:2580-2585,3019 crimson
    52121 
    52122 > color #1.12 gray
    52123 
    52124 > volume #4.6 level 0.5
    52125 
    52126 > volume zone #4.6 range 2 nearAtoms #6.6/v:2-5 | #6.6/Y:72-76 | #6.6/a:2549-2559 | (#6.6/a:2602&sideonly) | #6.6/a:2580-2585 | #6.6/a:3019 | #1.12/a:1672
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    52128 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.6.png width 800
    52129 > height 600 supersample 4
    52130 
    52131 > hide #!1.12#!4.6#!6.6 models
    52132 
    52133 > show #!1.12#!4.7#!6.7 models
    52134 
    52135 > show #6.7/a:2550-2558
    52136 
    52137 > show #6.7/a:2602&sidechain | #6.7/a:2602@C5',O3'
    52138 
    52139 > show #6.7/a:2580-2585,3019
    52140 
    52141 > show #6.7/Y:72-76/v:2-6
    52142 
    52143 > show #1.12/a:1670-1674
    52144 
    52145 > color #6.7/a:2549-2559 cadet blue
    52146 
    52147 > color #6.7/a:2602 #8770B5
    52148 
    52149 > color #6.7/a:2580-2585,3019 crimson
    52150 
    52151 > color #1.12 gray
    52152 
    52153 > volume #4.7 level 0.5
    52154 
    52155 > volume zone #4.7 range 2 nearAtoms #6.7/v:2-5 | #6.7/Y:72-76 | #6.7/a:2549-2559 | (#6.7/a:2602&sideonly) | #6.7/a:2580-2585 | #6.7/a:3019 | #1.12/a:1672
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    52157 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.7.png width 800
    52158 > height 600 supersample 4
    52159 
    52160 > hide #!1.12#!4.7#!6.7 models
    52161 
    52162 > show #!1.12#!4.8#!6.8 models
    52163 
    52164 > show #6.8/a:2550-2558
    52165 
    52166 > show #6.8/a:2602&sidechain | #6.8/a:2602@C5',O3'
    52167 
    52168 > show #6.8/a:2580-2585,3019
    52169 
    52170 > show #6.8/Y:72-76/v:2-6
    52171 
    52172 > show #1.12/a:1670-1674
    52173 
    52174 > color #6.8/a:2549-2559 cadet blue
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    52176 > color #6.8/a:2602 #8770B5
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    52178 > color #6.8/a:2580-2585,3019 crimson
    52179 
    52180 > color #1.12 gray
    52181 
    52182 > volume #4.8 level 0.5
    52183 
    52184 > volume zone #4.8 range 2 nearAtoms #6.8/v:2-5 | #6.8/Y:72-76 | #6.8/a:2549-2559 | (#6.8/a:2602&sideonly) | #6.8/a:2580-2585 | #6.8/a:3019 | #1.12/a:1672
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    52186 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.8.png width 800
    52187 > height 600 supersample 4
    52188 
    52189 > hide #!1.12#!4.8#!6.8 models
    52190 
    52191 > show #!1.12#!4.9#!6.9 models
    52192 
    52193 > show #6.9/a:2550-2558
    52194 
    52195 > show #6.9/a:2602&sidechain | #6.9/a:2602@C5',O3'
    52196 
    52197 > show #6.9/a:2580-2585,3019
    52198 
    52199 > show #6.9/Y:72-76/v:2-6
    52200 
    52201 > show #1.12/a:1670-1674
    52202 
    52203 > color #6.9/a:2549-2559 cadet blue
    52204 
    52205 > color #6.9/a:2602 #8770B5
    52206 
    52207 > color #6.9/a:2580-2585,3019 crimson
    52208 
    52209 > color #1.12 gray
    52210 
    52211 > volume #4.9 level 0.5
    52212 
    52213 > volume zone #4.9 range 2 nearAtoms #6.9/v:2-5 | #6.9/Y:72-76 | #6.9/a:2549-2559 | (#6.9/a:2602&sideonly) | #6.9/a:2580-2585 | #6.9/a:3019 | #1.12/a:1672
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    52215 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.9.png width 800
    52216 > height 600 supersample 4
    52217 
    52218 > hide #!1.12#!4.9#!6.9 models
    52219 
    52220 > show #!1.12#!4.10#!6.10 models
    52221 
    52222 > show #6.10/a:2550-2558
    52223 
    52224 > show #6.10/a:2602&sidechain | #6.10/a:2602@C5',O3'
    52225 
    52226 > show #6.10/a:2580-2585,3019
    52227 
    52228 > show #6.10/Y:72-76/v:2-6
    52229 
    52230 > show #1.12/a:1670-1674
    52231 
    52232 > color #6.10/a:2549-2559 cadet blue
    52233 
    52234 > color #6.10/a:2602 #8770B5
    52235 
    52236 > color #6.10/a:2580-2585,3019 crimson
    52237 
    52238 > color #1.12 gray
    52239 
    52240 > volume #4.10 level 0.5
    52241 
    52242 > volume zone #4.10 range 2 nearAtoms #6.10/v:2-5 | #6.10/Y:72-76 | #6.10/a:2549-2559 | (#6.10/a:2602&sideonly) | #6.10/a:2580-2585 | #6.10/a:3019 | #1.12/a:1672
    52243 
    52244 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.0.png width 800
    52245 > height 600 supersample 4
    52246 
    52247 > hide #!1.12#!4.10#!6.10 models
    52248 
    52249 > show #!1.12#!4.5#!6.5 models
    52250 
    52251 > show #6.5/a:2550-2558
    52252 
    52253 > show #6.5/a:2602&sidechain | #6.5/a:2602@C5',O3'
    52254 
    52255 > show #6.5/a:2580-2585,3019
    52256 
    52257 > show #6.5/Y:72-76/v:2-6
    52258 
    52259 > show #1.12/a:1670-1674
    52260 
    52261 > color #6.5/a:2549-2559 cadet blue
    52262 
    52263 > color #6.5/a:2602 #8770B5
    52264 
    52265 > color #6.5/a:2580-2585,3019 crimson
    52266 
    52267 > color #1.12 gray
    52268 
    52269 > volume #4.5 level 0.5
    52270 
    52271 > volume zone #4.5 range 2 nearAtoms #6.5/v:2-5 | #6.5/Y:72-76 | #6.5/a:2549-2559 | (#6.5/a:2602&sideonly) | #6.5/a:2580-2585 | #6.5/a:3019 | #1.12/a:1672
    52272 
    52273 > hide #!1.12#!4.5#!6.5 models
    52274 
    52275 > show #!1.12#!4.5#!6.5 models
    52276 
    52277 > show #6.5/a:2550-2558
    52278 
    52279 > show #6.5/a:2602&sidechain | #6.5/a:2602@C5',O3'
    52280 
    52281 > show #6.5/a:2506&sidechain
    52282 
    52283 > show #6.5/a:2580-2585,3019
    52284 
    52285 > show #6.5/Y:72-76/v:2-6
    52286 
    52287 > show #1.12/a:1670-1674
    52288 
    52289 > color #6.5/a:2549-2559 cadet blue
    52290 
    52291 > color #6.5/a:2602 #8770B5
    52292 
    52293 > color #6.5/a:2580-2585,3019 crimson
    52294 
    52295 > color #1.12 gray
    52296 
    52297 > volume #4.5 level 0.5
    52298 
    52299 > volume zone #4.5 range 2 nearAtoms #6.5/v:2-5 | #6.5/Y:72-76 | #6.5/a:2549-2559 | (#6.5/a:2602,2506&sideonly) | #6.5/a:2580-2585 | #6.5/a:3019 | #1.12/a:1672
    52300 
    52301 > hide #6.*
    52302 
    52303 > show #!1.12#!4.1#!6.1 models
    52304 
    52305 > show #6.1/a:2550-2558
    52306 
    52307 > show #6.1/a:2602&sidechain | #6.1/a:2602@C5',O3'
    52308 
    52309 > show #6.1/a:2506&sidechain
    52310 
    52311 > show #6.1/a:2580-2585,3019
    52312 
    52313 > show #6.1/Y:72-76/v:2-6
    52314 
    52315 > show #1.12/a:1670-1674
    52316 
    52317 > color #6.1/a:2549-2559 cadet blue
    52318 
    52319 > color #6.1/a:2602 #8770B5
    52320 
    52321 > color #6.1/a:2580-2585,3019 crimson
    52322 
    52323 > color #1.12 gray
    52324 
    52325 > volume #4.1 level 0.5
    52326 
    52327 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-5 | #6.1/Y:72-76 | #6.1/a:2549-2559 | (#6.1/a:2602,2506&sideonly) | #6.1/a:2580-2585 | #6.1/a:3019 | #1.12/a:1672
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    52329 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.1.png width 800
    52330 > height 600 supersample 4
    52331 
    52332 > hide #!1.12#!4.1#!6.1 models
    52333 
    52334 > show #!1.12#!4.2#!6.2 models
    52335 
    52336 > show #6.2/a:2550-2558
    52337 
    52338 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
    52339 
    52340 > show #6.2/a:2506&sidechain
    52341 
    52342 > show #6.2/a:2580-2585,3019
    52343 
    52344 > show #6.2/Y:72-76/v:2-6
    52345 
    52346 > show #1.12/a:1670-1674
    52347 
    52348 > color #6.2/a:2549-2559 cadet blue
    52349 
    52350 > color #6.2/a:2602 #8770B5
    52351 
    52352 > color #6.2/a:2580-2585,3019 crimson
    52353 
    52354 > color #1.12 gray
    52355 
    52356 > volume #4.2 level 0.5
    52357 
    52358 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | #6.2/a:2549-2559 | (#6.2/a:2602,2506&sideonly) | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
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    52360 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.2.png width 800
    52361 > height 600 supersample 4
    52362 
    52363 > hide #!1.12#!4.2#!6.2 models
    52364 
    52365 > show #!1.12#!4.3#!6.3 models
    52366 
    52367 > show #6.3/a:2550-2558
    52368 
    52369 > show #6.3/a:2602&sidechain | #6.3/a:2602@C5',O3'
    52370 
    52371 > show #6.3/a:2506&sidechain
    52372 
    52373 > show #6.3/a:2580-2585,3019
    52374 
    52375 > show #6.3/Y:72-76/v:2-6
    52376 
    52377 > show #1.12/a:1670-1674
    52378 
    52379 > color #6.3/a:2549-2559 cadet blue
    52380 
    52381 > color #6.3/a:2602 #8770B5
    52382 
    52383 > color #6.3/a:2580-2585,3019 crimson
    52384 
    52385 > color #1.12 gray
    52386 
    52387 > volume #4.3 level 0.5
    52388 
    52389 > volume zone #4.3 range 2 nearAtoms #6.3/v:2-5 | #6.3/Y:72-76 | #6.3/a:2549-2559 | (#6.3/a:2602,2506&sideonly) | #6.3/a:2580-2585 | #6.3/a:3019 | #1.12/a:1672
    52390 
    52391 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.3.png width 800
    52392 > height 600 supersample 4
    52393 
    52394 > hide #!1.12#!4.3#!6.3 models
    52395 
    52396 > show #!1.12#!4.4#!6.4 models
    52397 
    52398 > show #6.4/a:2550-2558
    52399 
    52400 > show #6.4/a:2602&sidechain | #6.4/a:2602@C5',O3'
    52401 
    52402 > show #6.4/a:2506&sidechain
    52403 
    52404 > show #6.4/a:2580-2585,3019
    52405 
    52406 > show #6.4/Y:72-76/v:2-6
    52407 
    52408 > show #1.12/a:1670-1674
    52409 
    52410 > color #6.4/a:2549-2559 cadet blue
    52411 
    52412 > color #6.4/a:2602 #8770B5
    52413 
    52414 > color #6.4/a:2580-2585,3019 crimson
    52415 
    52416 > color #1.12 gray
    52417 
    52418 > volume #4.4 level 0.5
    52419 
    52420 > volume zone #4.4 range 2 nearAtoms #6.4/v:2-5 | #6.4/Y:72-76 | #6.4/a:2549-2559 | (#6.4/a:2602,2506&sideonly) | #6.4/a:2580-2585 | #6.4/a:3019 | #1.12/a:1672
    52421 
    52422 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.4.png width 800
    52423 > height 600 supersample 4
    52424 
    52425 > hide #!1.12#!4.4#!6.4 models
    52426 
    52427 > show #!1.12#!4.5#!6.5 models
    52428 
    52429 > show #6.5/a:2550-2558
    52430 
    52431 > show #6.5/a:2602&sidechain | #6.5/a:2602@C5',O3'
    52432 
    52433 > show #6.5/a:2506&sidechain
    52434 
    52435 > show #6.5/a:2580-2585,3019
    52436 
    52437 > show #6.5/Y:72-76/v:2-6
    52438 
    52439 > show #1.12/a:1670-1674
    52440 
    52441 > color #6.5/a:2549-2559 cadet blue
    52442 
    52443 > color #6.5/a:2602 #8770B5
    52444 
    52445 > color #6.5/a:2580-2585,3019 crimson
    52446 
    52447 > color #1.12 gray
    52448 
    52449 > volume #4.5 level 0.5
    52450 
    52451 > volume zone #4.5 range 2 nearAtoms #6.5/v:2-5 | #6.5/Y:72-76 | #6.5/a:2549-2559 | (#6.5/a:2602,2506&sideonly) | #6.5/a:2580-2585 | #6.5/a:3019 | #1.12/a:1672
    52452 
    52453 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.5.png width 800
    52454 > height 600 supersample 4
    52455 
    52456 > hide #!1.12#!4.5#!6.5 models
    52457 
    52458 > show #!1.12#!4.6#!6.6 models
    52459 
    52460 > show #6.6/a:2550-2558
    52461 
    52462 > show #6.6/a:2602&sidechain | #6.6/a:2602@C5',O3'
    52463 
    52464 > show #6.6/a:2506&sidechain
    52465 
    52466 > show #6.6/a:2580-2585,3019
    52467 
    52468 > show #6.6/Y:72-76/v:2-6
    52469 
    52470 > show #1.12/a:1670-1674
    52471 
    52472 > color #6.6/a:2549-2559 cadet blue
    52473 
    52474 > color #6.6/a:2602 #8770B5
    52475 
    52476 > color #6.6/a:2580-2585,3019 crimson
    52477 
    52478 > color #1.12 gray
    52479 
    52480 > volume #4.6 level 0.5
    52481 
    52482 > volume zone #4.6 range 2 nearAtoms #6.6/v:2-5 | #6.6/Y:72-76 | #6.6/a:2549-2559 | (#6.6/a:2602,2506&sideonly) | #6.6/a:2580-2585 | #6.6/a:3019 | #1.12/a:1672
    52483 
    52484 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.6.png width 800
    52485 > height 600 supersample 4
    52486 
    52487 > hide #!1.12#!4.6#!6.6 models
    52488 
    52489 > show #!1.12#!4.7#!6.7 models
    52490 
    52491 > show #6.7/a:2550-2558
    52492 
    52493 > show #6.7/a:2602&sidechain | #6.7/a:2602@C5',O3'
    52494 
    52495 > show #6.7/a:2506&sidechain
    52496 
    52497 > show #6.7/a:2580-2585,3019
    52498 
    52499 > show #6.7/Y:72-76/v:2-6
    52500 
    52501 > show #1.12/a:1670-1674
    52502 
    52503 > color #6.7/a:2549-2559 cadet blue
    52504 
    52505 > color #6.7/a:2602 #8770B5
    52506 
    52507 > color #6.7/a:2580-2585,3019 crimson
    52508 
    52509 > color #1.12 gray
    52510 
    52511 > volume #4.7 level 0.5
    52512 
    52513 > volume zone #4.7 range 2 nearAtoms #6.7/v:2-5 | #6.7/Y:72-76 | #6.7/a:2549-2559 | (#6.7/a:2602,2506&sideonly) | #6.7/a:2580-2585 | #6.7/a:3019 | #1.12/a:1672
    52514 
    52515 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.7.png width 800
    52516 > height 600 supersample 4
    52517 
    52518 > hide #!1.12#!4.7#!6.7 models
    52519 
    52520 > show #!1.12#!4.8#!6.8 models
    52521 
    52522 > show #6.8/a:2550-2558
    52523 
    52524 > show #6.8/a:2602&sidechain | #6.8/a:2602@C5',O3'
    52525 
    52526 > show #6.8/a:2506&sidechain
    52527 
    52528 > show #6.8/a:2580-2585,3019
    52529 
    52530 > show #6.8/Y:72-76/v:2-6
    52531 
    52532 > show #1.12/a:1670-1674
    52533 
    52534 > color #6.8/a:2549-2559 cadet blue
    52535 
    52536 > color #6.8/a:2602 #8770B5
    52537 
    52538 > color #6.8/a:2580-2585,3019 crimson
    52539 
    52540 > color #1.12 gray
    52541 
    52542 > volume #4.8 level 0.5
    52543 
    52544 > volume zone #4.8 range 2 nearAtoms #6.8/v:2-5 | #6.8/Y:72-76 | #6.8/a:2549-2559 | (#6.8/a:2602,2506&sideonly) | #6.8/a:2580-2585 | #6.8/a:3019 | #1.12/a:1672
    52545 
    52546 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.8.png width 800
    52547 > height 600 supersample 4
    52548 
    52549 > hide #!1.12#!4.8#!6.8 models
    52550 
    52551 > show #!1.12#!4.9#!6.9 models
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    52777 > show #6.5/a:2602&sidechain | #6.5/a:2602@C5',O3'
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    52783 > show #6.5/Y:72-76/v:2-6
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    52795 > color #1.12 gray
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    52797 > volume #4.5 level 0.5
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    52799 > volume zone #4.5 range 2 nearAtoms #6.5/v:2-5 | #6.5/Y:72-76 | #6.5/a:2549-2559 | (#6.5/a:2602,2506&sideonly) | #6.5/a:2580-2585 | #6.5/a:3019 | #1.12/a:1672
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    52810 > show #6.6/a:2602&sidechain | #6.6/a:2602@C5',O3'
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    52812 > show #6.6/a:2506&sidechain
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    52826 > color #6.6/a:2580-2585,3019 crimson
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    52828 > color #1.12 gray
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    52830 > volume #4.6 level 0.5
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    52832 > volume zone #4.6 range 2 nearAtoms #6.6/v:2-5 | #6.6/Y:72-76 | #6.6/a:2549-2559 | (#6.6/a:2602,2506&sideonly) | #6.6/a:2580-2585 | #6.6/a:3019 | #1.12/a:1672
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    52843 > show #6.7/a:2602&sidechain | #6.7/a:2602@C5',O3'
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    52859 > color #6.7/a:2580-2585,3019 crimson
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    52861 > color #1.12 gray
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    52863 > volume #4.7 level 0.5
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    52865 > volume zone #4.7 range 2 nearAtoms #6.7/v:2-5 | #6.7/Y:72-76 | #6.7/a:2549-2559 | (#6.7/a:2602,2506&sideonly) | #6.7/a:2580-2585 | #6.7/a:3019 | #1.12/a:1672
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    52869 
    52870 > hide #!1.12#!4.7#!6.7 models
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    52872 > show #!1.12#!4.8#!6.8 models
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    52874 > show #6.8/a:2550-2558
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    52876 > show #6.8/a:2602&sidechain | #6.8/a:2602@C5',O3'
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    52878 > show #6.8/a:2506&sidechain
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    52880 > show #6.8/a:2580-2585,3019
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    52882 > show #6.8/Y:72-76/v:2-6
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    52884 > show #1.12/a:1670-1674
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    52894 > color #1.12 gray
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    52896 > volume #4.8 level 0.5
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    52898 > volume zone #4.8 range 2 nearAtoms #6.8/v:2-5 | #6.8/Y:72-76 | #6.8/a:2549-2559 | (#6.8/a:2602,2506&sideonly) | #6.8/a:2580-2585 | #6.8/a:3019 | #1.12/a:1672
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    52905 > show #!1.12#!4.9#!6.9 models
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    52907 > show #6.9/a:2550-2558
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    52909 > show #6.9/a:2602&sidechain | #6.9/a:2602@C5',O3'
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    52911 > show #6.9/a:2506&sidechain
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    52913 > show #6.9/a:2580-2585,3019
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    52915 > show #6.9/Y:72-76/v:2-6
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    52919 > color #6.9/a:2549-2559 cadet blue
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    52925 > color #6.9/a:2580-2585,3019 crimson
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    52927 > color #1.12 gray
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    52929 > volume #4.9 level 0.5
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    52931 > volume zone #4.9 range 2 nearAtoms #6.9/v:2-5 | #6.9/Y:72-76 | #6.9/a:2549-2559 | (#6.9/a:2602,2506&sideonly) | #6.9/a:2580-2585 | #6.9/a:3019 | #1.12/a:1672
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    52935 
    52936 > hide #!1.12#!4.9#!6.9 models
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    52938 > show #!1.12#!4.10#!6.10 models
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    52940 > show #6.10/a:2550-2558
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    52942 > show #6.10/a:2602&sidechain | #6.10/a:2602@C5',O3'
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    52958 > color #6.10/a:2580-2585,3019 crimson
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    52960 > color #1.12 gray
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    52962 > volume #4.10 level 0.5
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    52964 > volume zone #4.10 range 2 nearAtoms #6.10/v:2-5 | #6.10/Y:72-76 | #6.10/a:2549-2559 | (#6.10/a:2602,2506&sideonly) | #6.10/a:2580-2585 | #6.10/a:3019 | #1.12/a:1672
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    52975 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
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    52979 > show #6.2/Y:72-76/v:2-6
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    52983 > color #6.2/a:2549-2559 cadet blue
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    52989 > color #6.2/a:2580-2585,3019 crimson
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    52995 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | #6.2/a:2549-2559 | (#6.2/a:2602,2506&sideonly) | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
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    53012 > show #1.12/a:1670-1674
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    53014 > color #6.2/a:2549-2559 cadet blue
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    53018 > color #6.2/a:2506 green yellow
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    53020 > color #6.2/a:2580-2585,3019 crimson
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    53022 > color #1.12 gray
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    53024 > volume #4.2 level 0.5
    53025 
    53026 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | #6.2/a:2549-2559 | (#6.2/a:2602,2506&sideonly) | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    53027 
    53028 > volume #4.2 level 0.5,0.3
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    53030 Surface level must be a single value 
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    53032 > volume #4.2 level 0.5:0.3
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    53034 Invalid "level" argument: Expected a number 
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    53036 > volume #4.2 level 0.5 level 0.3
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    53038 > volume #4.2 level 0.5 level 0.3 meshLighting
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    53040 Missing "meshLighting" keyword's argument 
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    53042 > volume #4.2 level 0.5 style mesh level 0.3 style mesh
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    53044 Repeated keyword argument "style" 
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    53046 > volume #4.2 level 0.5 style mesh level 0.3
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    53048 > volume #4.2 level 0.5
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    53050 > volume #4.2 level 0.5 style mesh
    53051 
    53052 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | #6.2/a:2549-2559 | (#6.2/a:2602,2506&sideonly) | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    53053 
    53054 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly)
    53055 
    53056 [Repeated 1 time(s)]
    53057 
    53058 > volume #4.2 level 0.3
    53059 
    53060 > ~show #6.2/a:2506&sidechain
    53061 
    53062 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly)
    53063 
    53064 > volume #4.2 level 0.25
    53065 
    53066 > view matrix camera
    53067 > -0.82811,0.53756,-0.1589,128.3,0.3332,0.24409,-0.91072,112.05,-0.45078,-0.80711,-0.38126,121.73
    53068 
    53069 [Repeated 2 time(s)]
    53070 
    53071 > clip list
    53072 
    53073 Using 2 clip planes: 
    53074 far offset 8.0092, axis -0.159,-0.911,-0.381, point 139,179.5,148) 
    53075 near offset -8.5302, axis 0.159,0.911,0.381, point 137.3,163.6,143.3) 
    53076 
    53077 > ~clip
    53078 
    53079 > clip near -17.283 far 6.1765
    53080 
    53081 > ~clip
    53082 
    53083 > clip near -8.5302 far 8.0092
    53084 
    53085 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | #6.2/a:2549-2559 | (#6.2/a:2602,2506&sideonly) | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    53086 
    53087 > volume #4.2 level 0.5
    53088 
    53089 > view matrix camera
    53090 > -0.80327,0.55343,-0.22016,125.45,0.45245,0.3266,-0.82984,121.86,-0.38735,-0.76617,-0.51276,115.69
    53091 
    53092 > ~clip
    53093 
    53094 > clip near -8.5302 far 8.0092
    53095 
    53096 > ~clip
    53097 
    53098 > clip near -17.283 far 6.1765
    53099 
    53100 > view matrix
    53101 
    53102 view matrix camera
    53103 -0.80327,0.55343,-0.22016,125.45,0.45245,0.3266,-0.82984,121.86,-0.38735,-0.76617,-0.51276,115.69 
    53104 view matrix models
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#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0 
    53106  
    53107 
    53108 > view matrix camera
    53109 > -0.77481,0.61188,-0.1589,128.12,0.35436,0.21221,-0.91072,112.16,-0.52353,-0.76194,-0.38126,121.53
    53110 
    53111 > view matrix camera
    53112 > -0.82811,0.53756,-0.1589,128.3,0.3332,0.24409,-0.91072,112.05,-0.45078,-0.80711,-0.38126,121.73
    53113 
    53114 > view matrix
    53115 
    53116 view matrix camera
    53117 -0.82811,0.53756,-0.1589,129.71,0.3332,0.24409,-0.91072,115.62,-0.45078,-0.80711,-0.38126,123.29 
    53118 view matrix models
    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    53427 > show #6.5/a:2602&sidechain | #6.5/a:2602@C5',O3'
    53428 
    53429 > show #6.5/a:2506&sidechain
    53430 
    53431 > show #6.5/a:2580-2585,3019
    53432 
    53433 > show #6.5/Y:72-76/v:2-6
    53434 
    53435 > show #1.12/a:1670-1674
    53436 
    53437 > style #6.5/a:2552@CM2 sphere
    53438 
    53439 Changed 1 atom style 
    53440 
    53441 > size #6.2/a:2552@CM2 atomRadius 0.9
    53442 
    53443 Changed 1 atom radii 
    53444 
    53445 > color #6.5/a:2549-2559 cadet blue
    53446 
    53447 > color #6.5/a:2602 #8770B5
    53448 
    53449 > color #6.5/a:2506 green yellow
    53450 
    53451 > color #6.5/a:2580-2585,3019 crimson
    53452 
    53453 > color #1.12 gray
    53454 
    53455 > volume #4.5 level 0.5
    53456 
    53457 > volume zone #4.5 range 2 nearAtoms #6.5/v:2-5 | #6.5/Y:72-76 | #6.5/a:2549-2559 | (#6.5/a:2602,2506&sideonly) | #6.5/a:2580-2585 | #6.5/a:3019 | #1.12/a:1672
    53458 
    53459 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.5.png width 800
    53460 > height 600 supersample 4
    53461 
    53462 > hide #!1.12#!4.5#!6.5 models
    53463 
    53464 > show #!1.12#!4.6#!6.6 models
    53465 
    53466 > show #6.6/a:2550-2558
    53467 
    53468 > show #6.6/a:2602&sidechain | #6.6/a:2602@C5',O3'
    53469 
    53470 > show #6.6/a:2506&sidechain
    53471 
    53472 > show #6.6/a:2580-2585,3019
    53473 
    53474 > show #6.6/Y:72-76/v:2-6
    53475 
    53476 > show #1.12/a:1670-1674
    53477 
    53478 > style #6.6/a:2552@CM2 sphere
    53479 
    53480 Changed 1 atom style 
    53481 
    53482 > size #6.2/a:2552@CM2 atomRadius 0.9
    53483 
    53484 Changed 1 atom radii 
    53485 
    53486 > color #6.6/a:2549-2559 cadet blue
    53487 
    53488 > color #6.6/a:2602 #8770B5
    53489 
    53490 > color #6.6/a:2506 green yellow
    53491 
    53492 > color #6.6/a:2580-2585,3019 crimson
    53493 
    53494 > color #1.12 gray
    53495 
    53496 > volume #4.6 level 0.5
    53497 
    53498 > volume zone #4.6 range 2 nearAtoms #6.6/v:2-5 | #6.6/Y:72-76 | #6.6/a:2549-2559 | (#6.6/a:2602,2506&sideonly) | #6.6/a:2580-2585 | #6.6/a:3019 | #1.12/a:1672
    53499 
    53500 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.6.png width 800
    53501 > height 600 supersample 4
    53502 
    53503 > hide #!1.12#!4.6#!6.6 models
    53504 
    53505 > show #!1.12#!4.7#!6.7 models
    53506 
    53507 > show #6.7/a:2550-2558
    53508 
    53509 > show #6.7/a:2602&sidechain | #6.7/a:2602@C5',O3'
    53510 
    53511 > show #6.7/a:2506&sidechain
    53512 
    53513 > show #6.7/a:2580-2585,3019
    53514 
    53515 > show #6.7/Y:72-76/v:2-6
    53516 
    53517 > show #1.12/a:1670-1674
    53518 
    53519 > style #6.7/a:2552@CM2 sphere
    53520 
    53521 Changed 1 atom style 
    53522 
    53523 > size #6.2/a:2552@CM2 atomRadius 0.9
    53524 
    53525 Changed 1 atom radii 
    53526 
    53527 > color #6.7/a:2549-2559 cadet blue
    53528 
    53529 > color #6.7/a:2602 #8770B5
    53530 
    53531 > color #6.7/a:2506 green yellow
    53532 
    53533 > color #6.7/a:2580-2585,3019 crimson
    53534 
    53535 > color #1.12 gray
    53536 
    53537 > volume #4.7 level 0.5
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    53539 > volume zone #4.7 range 2 nearAtoms #6.7/v:2-5 | #6.7/Y:72-76 | #6.7/a:2549-2559 | (#6.7/a:2602,2506&sideonly) | #6.7/a:2580-2585 | #6.7/a:3019 | #1.12/a:1672
    53540 
    53541 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.7.png width 800
    53542 > height 600 supersample 4
    53543 
    53544 > hide #!1.12#!4.7#!6.7 models
    53545 
    53546 > show #!1.12#!4.8#!6.8 models
    53547 
    53548 > show #6.8/a:2550-2558
    53549 
    53550 > show #6.8/a:2602&sidechain | #6.8/a:2602@C5',O3'
    53551 
    53552 > show #6.8/a:2506&sidechain
    53553 
    53554 > show #6.8/a:2580-2585,3019
    53555 
    53556 > show #6.8/Y:72-76/v:2-6
    53557 
    53558 > show #1.12/a:1670-1674
    53559 
    53560 > style #6.8/a:2552@CM2 sphere
    53561 
    53562 Changed 1 atom style 
    53563 
    53564 > size #6.2/a:2552@CM2 atomRadius 0.9
    53565 
    53566 Changed 1 atom radii 
    53567 
    53568 > color #6.8/a:2549-2559 cadet blue
    53569 
    53570 > color #6.8/a:2602 #8770B5
    53571 
    53572 > color #6.8/a:2506 green yellow
    53573 
    53574 > color #6.8/a:2580-2585,3019 crimson
    53575 
    53576 > color #1.12 gray
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    53578 > volume #4.8 level 0.5
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    53580 > volume zone #4.8 range 2 nearAtoms #6.8/v:2-5 | #6.8/Y:72-76 | #6.8/a:2549-2559 | (#6.8/a:2602,2506&sideonly) | #6.8/a:2580-2585 | #6.8/a:3019 | #1.12/a:1672
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    53582 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.8.png width 800
    53583 > height 600 supersample 4
    53584 
    53585 > hide #!1.12#!4.8#!6.8 models
    53586 
    53587 > show #!1.12#!4.9#!6.9 models
    53588 
    53589 > show #6.9/a:2550-2558
    53590 
    53591 > show #6.9/a:2602&sidechain | #6.9/a:2602@C5',O3'
    53592 
    53593 > show #6.9/a:2506&sidechain
    53594 
    53595 > show #6.9/a:2580-2585,3019
    53596 
    53597 > show #6.9/Y:72-76/v:2-6
    53598 
    53599 > show #1.12/a:1670-1674
    53600 
    53601 > style #6.9/a:2552@CM2 sphere
    53602 
    53603 Changed 1 atom style 
    53604 
    53605 > size #6.2/a:2552@CM2 atomRadius 0.9
    53606 
    53607 Changed 1 atom radii 
    53608 
    53609 > color #6.9/a:2549-2559 cadet blue
    53610 
    53611 > color #6.9/a:2602 #8770B5
    53612 
    53613 > color #6.9/a:2506 green yellow
    53614 
    53615 > color #6.9/a:2580-2585,3019 crimson
    53616 
    53617 > color #1.12 gray
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    53619 > volume #4.9 level 0.5
    53620 
    53621 > volume zone #4.9 range 2 nearAtoms #6.9/v:2-5 | #6.9/Y:72-76 | #6.9/a:2549-2559 | (#6.9/a:2602,2506&sideonly) | #6.9/a:2580-2585 | #6.9/a:3019 | #1.12/a:1672
    53622 
    53623 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.9.png width 800
    53624 > height 600 supersample 4
    53625 
    53626 > hide #!1.12#!4.9#!6.9 models
    53627 
    53628 > show #!1.12#!4.10#!6.10 models
    53629 
    53630 > show #6.10/a:2550-2558
    53631 
    53632 > show #6.10/a:2602&sidechain | #6.10/a:2602@C5',O3'
    53633 
    53634 > show #6.10/a:2506&sidechain
    53635 
    53636 > show #6.10/a:2580-2585,3019
    53637 
    53638 > show #6.10/Y:72-76/v:2-6
    53639 
    53640 > show #1.12/a:1670-1674
    53641 
    53642 > style #6.10/a:2552@CM2 sphere
    53643 
    53644 Changed 1 atom style 
    53645 
    53646 > size #6.2/a:2552@CM2 atomRadius 0.9
    53647 
    53648 Changed 1 atom radii 
    53649 
    53650 > color #6.10/a:2549-2559 cadet blue
    53651 
    53652 > color #6.10/a:2602 #8770B5
    53653 
    53654 > color #6.10/a:2506 green yellow
    53655 
    53656 > color #6.10/a:2580-2585,3019 crimson
    53657 
    53658 > color #1.12 gray
    53659 
    53660 > volume #4.10 level 0.5
    53661 
    53662 > volume zone #4.10 range 2 nearAtoms #6.10/v:2-5 | #6.10/Y:72-76 | #6.10/a:2549-2559 | (#6.10/a:2602,2506&sideonly) | #6.10/a:2580-2585 | #6.10/a:3019 | #1.12/a:1672
    53663 
    53664 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.0.png width 800
    53665 > height 600 supersample 4
    53666 
    53667 > hide #!1.12#!4.10#!6.10 models
    53668 
    53669 > show #!1.12#!4.1#!6.1 models
    53670 
    53671 > show #6.1/a:2550-2558
    53672 
    53673 > show #6.1/a:2602&sidechain | #6.1/a:2602@C5',O3'
    53674 
    53675 > show #6.1/a:2506&sidechain
    53676 
    53677 > show #6.1/a:2580-2585,3019
    53678 
    53679 > show #6.1/Y:72-76/v:2-6
    53680 
    53681 > show #1.12/a:1670-1674
    53682 
    53683 > style #6.1/a:2552@CM2 sphere
    53684 
    53685 Changed 1 atom style 
    53686 
    53687 > size #6.1/a:2552@CM2 atomRadius 0.9
    53688 
    53689 Changed 1 atom radii 
    53690 
    53691 > color #6.1/a:2549-2559 cadet blue
    53692 
    53693 > color #6.1/a:2602 #8770B5
    53694 
    53695 > color #6.1/a:2506 green yellow
    53696 
    53697 > color #6.1/a:2580-2585,3019 crimson
    53698 
    53699 > color #1.12 gray
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    53701 > volume #4.1 level 0.5
    53702 
    53703 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-5 | #6.1/Y:72-76 | #6.1/a:2549-2559 | (#6.1/a:2602,2506&sideonly) | #6.1/a:2580-2585 | #6.1/a:3019 | #1.12/a:1672
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    53705 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.1.png width 800
    53706 > height 600 supersample 4
    53707 
    53708 > hide #!1.12#!4.1#!6.1 models
    53709 
    53710 > show #!1.12#!4.2#!6.2 models
    53711 
    53712 > show #6.2/a:2550-2558
    53713 
    53714 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
    53715 
    53716 > show #6.2/a:2580-2585,3019
    53717 
    53718 > show #6.2/Y:72-76/v:2-6
    53719 
    53720 > show #1.12/a:1670-1674
    53721 
    53722 > style #6.2/a:2552@CM2 sphere
    53723 
    53724 Changed 1 atom style 
    53725 
    53726 > size #6.2/a:2552@CM2 atomRadius 0.9
    53727 
    53728 Changed 1 atom radii 
    53729 
    53730 > color #6.2/a:2549-2559 cadet blue
    53731 
    53732 > color #6.2/a:2602 #8770B5
    53733 
    53734 > color #6.2/a:2506 green yellow
    53735 
    53736 > color #6.2/a:2580-2585,3019 crimson
    53737 
    53738 > color #1.12 gray
    53739 
    53740 > volume #4.2 level 0.5
    53741 
    53742 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | #6.2/a:2549-2559 | (#6.2/a:2602,2506&sideonly) | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
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    53744 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.2.png width 800
    53745 > height 600 supersample 4
    53746 
    53747 > hide #!1.12#!4.2#!6.2 models
    53748 
    53749 > show #!1.12#!4.3#!6.3 models
    53750 
    53751 > show #6.3/a:2550-2558
    53752 
    53753 > show #6.3/a:2602&sidechain | #6.3/a:2602@C5',O3'
    53754 
    53755 > show #6.3/a:2506&sidechain
    53756 
    53757 > show #6.3/a:2580-2585,3019
    53758 
    53759 > show #6.3/Y:72-76/v:2-6
    53760 
    53761 > show #1.12/a:1670-1674
    53762 
    53763 > style #6.3/a:2552@CM2 sphere
    53764 
    53765 Changed 1 atom style 
    53766 
    53767 > size #6.3/a:2552@CM2 atomRadius 0.9
    53768 
    53769 Changed 1 atom radii 
    53770 
    53771 > color #6.3/a:2549-2559 cadet blue
    53772 
    53773 > color #6.3/a:2602 #8770B5
    53774 
    53775 > color #6.3/a:2506 green yellow
    53776 
    53777 > color #6.3/a:2580-2585,3019 crimson
    53778 
    53779 > color #1.12 gray
    53780 
    53781 > volume #4.3 level 0.5
    53782 
    53783 > volume zone #4.3 range 2 nearAtoms #6.3/v:2-5 | #6.3/Y:72-76 | #6.3/a:2549-2559 | (#6.3/a:2602,2506&sideonly) | #6.3/a:2580-2585 | #6.3/a:3019 | #1.12/a:1672
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    53785 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.3.png width 800
    53786 > height 600 supersample 4
    53787 
    53788 > hide #!1.12#!4.3#!6.3 models
    53789 
    53790 > show #!1.12#!4.4#!6.4 models
    53791 
    53792 > show #6.4/a:2550-2558
    53793 
    53794 > show #6.4/a:2602&sidechain | #6.4/a:2602@C5',O3'
    53795 
    53796 > show #6.4/a:2506&sidechain
    53797 
    53798 > show #6.4/a:2580-2585,3019
    53799 
    53800 > show #6.4/Y:72-76/v:2-6
    53801 
    53802 > show #1.12/a:1670-1674
    53803 
    53804 > style #6.4/a:2552@CM2 sphere
    53805 
    53806 Changed 1 atom style 
    53807 
    53808 > size #6.4/a:2552@CM2 atomRadius 0.9
    53809 
    53810 Changed 1 atom radii 
    53811 
    53812 > color #6.4/a:2549-2559 cadet blue
    53813 
    53814 > color #6.4/a:2602 #8770B5
    53815 
    53816 > color #6.4/a:2506 green yellow
    53817 
    53818 > color #6.4/a:2580-2585,3019 crimson
    53819 
    53820 > color #1.12 gray
    53821 
    53822 > volume #4.4 level 0.5
    53823 
    53824 > volume zone #4.4 range 2 nearAtoms #6.4/v:2-5 | #6.4/Y:72-76 | #6.4/a:2549-2559 | (#6.4/a:2602,2506&sideonly) | #6.4/a:2580-2585 | #6.4/a:3019 | #1.12/a:1672
    53825 
    53826 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.4.png width 800
    53827 > height 600 supersample 4
    53828 
    53829 > hide #!1.12#!4.4#!6.4 models
    53830 
    53831 > show #!1.12#!4.5#!6.5 models
    53832 
    53833 > show #6.5/a:2550-2558
    53834 
    53835 > show #6.5/a:2602&sidechain | #6.5/a:2602@C5',O3'
    53836 
    53837 > show #6.5/a:2506&sidechain
    53838 
    53839 > show #6.5/a:2580-2585,3019
    53840 
    53841 > show #6.5/Y:72-76/v:2-6
    53842 
    53843 > show #1.12/a:1670-1674
    53844 
    53845 > style #6.5/a:2552@CM2 sphere
    53846 
    53847 Changed 1 atom style 
    53848 
    53849 > size #6.5/a:2552@CM2 atomRadius 0.9
    53850 
    53851 Changed 1 atom radii 
    53852 
    53853 > color #6.5/a:2549-2559 cadet blue
    53854 
    53855 > color #6.5/a:2602 #8770B5
    53856 
    53857 > color #6.5/a:2506 green yellow
    53858 
    53859 > color #6.5/a:2580-2585,3019 crimson
    53860 
    53861 > color #1.12 gray
    53862 
    53863 > volume #4.5 level 0.5
    53864 
    53865 > volume zone #4.5 range 2 nearAtoms #6.5/v:2-5 | #6.5/Y:72-76 | #6.5/a:2549-2559 | (#6.5/a:2602,2506&sideonly) | #6.5/a:2580-2585 | #6.5/a:3019 | #1.12/a:1672
    53866 
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    53868 > height 600 supersample 4
    53869 
    53870 > hide #!1.12#!4.5#!6.5 models
    53871 
    53872 > show #!1.12#!4.6#!6.6 models
    53873 
    53874 > show #6.6/a:2550-2558
    53875 
    53876 > show #6.6/a:2602&sidechain | #6.6/a:2602@C5',O3'
    53877 
    53878 > show #6.6/a:2506&sidechain
    53879 
    53880 > show #6.6/a:2580-2585,3019
    53881 
    53882 > show #6.6/Y:72-76/v:2-6
    53883 
    53884 > show #1.12/a:1670-1674
    53885 
    53886 > style #6.6/a:2552@CM2 sphere
    53887 
    53888 Changed 1 atom style 
    53889 
    53890 > size #6.6/a:2552@CM2 atomRadius 0.9
    53891 
    53892 Changed 1 atom radii 
    53893 
    53894 > color #6.6/a:2549-2559 cadet blue
    53895 
    53896 > color #6.6/a:2602 #8770B5
    53897 
    53898 > color #6.6/a:2506 green yellow
    53899 
    53900 > color #6.6/a:2580-2585,3019 crimson
    53901 
    53902 > color #1.12 gray
    53903 
    53904 > volume #4.6 level 0.5
    53905 
    53906 > volume zone #4.6 range 2 nearAtoms #6.6/v:2-5 | #6.6/Y:72-76 | #6.6/a:2549-2559 | (#6.6/a:2602,2506&sideonly) | #6.6/a:2580-2585 | #6.6/a:3019 | #1.12/a:1672
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    53909 > height 600 supersample 4
    53910 
    53911 > hide #!1.12#!4.6#!6.6 models
    53912 
    53913 > show #!1.12#!4.7#!6.7 models
    53914 
    53915 > show #6.7/a:2550-2558
    53916 
    53917 > show #6.7/a:2602&sidechain | #6.7/a:2602@C5',O3'
    53918 
    53919 > show #6.7/a:2506&sidechain
    53920 
    53921 > show #6.7/a:2580-2585,3019
    53922 
    53923 > show #6.7/Y:72-76/v:2-6
    53924 
    53925 > show #1.12/a:1670-1674
    53926 
    53927 > style #6.7/a:2552@CM2 sphere
    53928 
    53929 Changed 1 atom style 
    53930 
    53931 > size #6.7/a:2552@CM2 atomRadius 0.9
    53932 
    53933 Changed 1 atom radii 
    53934 
    53935 > color #6.7/a:2549-2559 cadet blue
    53936 
    53937 > color #6.7/a:2602 #8770B5
    53938 
    53939 > color #6.7/a:2506 green yellow
    53940 
    53941 > color #6.7/a:2580-2585,3019 crimson
    53942 
    53943 > color #1.12 gray
    53944 
    53945 > volume #4.7 level 0.5
    53946 
    53947 > volume zone #4.7 range 2 nearAtoms #6.7/v:2-5 | #6.7/Y:72-76 | #6.7/a:2549-2559 | (#6.7/a:2602,2506&sideonly) | #6.7/a:2580-2585 | #6.7/a:3019 | #1.12/a:1672
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    53950 > height 600 supersample 4
    53951 
    53952 > hide #!1.12#!4.7#!6.7 models
    53953 
    53954 > show #!1.12#!4.8#!6.8 models
    53955 
    53956 > show #6.8/a:2550-2558
    53957 
    53958 > show #6.8/a:2602&sidechain | #6.8/a:2602@C5',O3'
    53959 
    53960 > show #6.8/a:2506&sidechain
    53961 
    53962 > show #6.8/a:2580-2585,3019
    53963 
    53964 > show #6.8/Y:72-76/v:2-6
    53965 
    53966 > show #1.12/a:1670-1674
    53967 
    53968 > style #6.8/a:2552@CM2 sphere
    53969 
    53970 Changed 1 atom style 
    53971 
    53972 > size #6.8/a:2552@CM2 atomRadius 0.9
    53973 
    53974 Changed 1 atom radii 
    53975 
    53976 > color #6.8/a:2549-2559 cadet blue
    53977 
    53978 > color #6.8/a:2602 #8770B5
    53979 
    53980 > color #6.8/a:2506 green yellow
    53981 
    53982 > color #6.8/a:2580-2585,3019 crimson
    53983 
    53984 > color #1.12 gray
    53985 
    53986 > volume #4.8 level 0.5
    53987 
    53988 > volume zone #4.8 range 2 nearAtoms #6.8/v:2-5 | #6.8/Y:72-76 | #6.8/a:2549-2559 | (#6.8/a:2602,2506&sideonly) | #6.8/a:2580-2585 | #6.8/a:3019 | #1.12/a:1672
    53989 
    53990 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.8.png width 800
    53991 > height 600 supersample 4
    53992 
    53993 > hide #!1.12#!4.8#!6.8 models
    53994 
    53995 > show #!1.12#!4.9#!6.9 models
    53996 
    53997 > show #6.9/a:2550-2558
    53998 
    53999 > show #6.9/a:2602&sidechain | #6.9/a:2602@C5',O3'
    54000 
    54001 > show #6.9/a:2506&sidechain
    54002 
    54003 > show #6.9/a:2580-2585,3019
    54004 
    54005 > show #6.9/Y:72-76/v:2-6
    54006 
    54007 > show #1.12/a:1670-1674
    54008 
    54009 > style #6.9/a:2552@CM2 sphere
    54010 
    54011 Changed 1 atom style 
    54012 
    54013 > size #6.9/a:2552@CM2 atomRadius 0.9
    54014 
    54015 Changed 1 atom radii 
    54016 
    54017 > color #6.9/a:2549-2559 cadet blue
    54018 
    54019 > color #6.9/a:2602 #8770B5
    54020 
    54021 > color #6.9/a:2506 green yellow
    54022 
    54023 > color #6.9/a:2580-2585,3019 crimson
    54024 
    54025 > color #1.12 gray
    54026 
    54027 > volume #4.9 level 0.5
    54028 
    54029 > volume zone #4.9 range 2 nearAtoms #6.9/v:2-5 | #6.9/Y:72-76 | #6.9/a:2549-2559 | (#6.9/a:2602,2506&sideonly) | #6.9/a:2580-2585 | #6.9/a:3019 | #1.12/a:1672
    54030 
    54031 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.9.png width 800
    54032 > height 600 supersample 4
    54033 
    54034 > hide #!1.12#!4.9#!6.9 models
    54035 
    54036 > show #!1.12#!4.10#!6.10 models
    54037 
    54038 > show #6.10/a:2550-2558
    54039 
    54040 > show #6.10/a:2602&sidechain | #6.10/a:2602@C5',O3'
    54041 
    54042 > show #6.10/a:2506&sidechain
    54043 
    54044 > show #6.10/a:2580-2585,3019
    54045 
    54046 > show #6.10/Y:72-76/v:2-6
    54047 
    54048 > show #1.12/a:1670-1674
    54049 
    54050 > style #6.10/a:2552@CM2 sphere
    54051 
    54052 Changed 1 atom style 
    54053 
    54054 > size #6.10/a:2552@CM2 atomRadius 0.9
    54055 
    54056 Changed 1 atom radii 
    54057 
    54058 > color #6.10/a:2549-2559 cadet blue
    54059 
    54060 > color #6.10/a:2602 #8770B5
    54061 
    54062 > color #6.10/a:2506 green yellow
    54063 
    54064 > color #6.10/a:2580-2585,3019 crimson
    54065 
    54066 > color #1.12 gray
    54067 
    54068 > volume #4.10 level 0.5
    54069 
    54070 > volume zone #4.10 range 2 nearAtoms #6.10/v:2-5 | #6.10/Y:72-76 | #6.10/a:2549-2559 | (#6.10/a:2602,2506&sideonly) | #6.10/a:2580-2585 | #6.10/a:3019 | #1.12/a:1672
    54071 
    54072 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.0.png width 800
    54073 > height 600 supersample 4
    54074 
    54075 > hide #!1.12#!4.10#!6.10 models
    54076 
    54077 > show #!1.12#!4.2#!6.2 models
    54078 
    54079 > show #6.2/a:2550-2558
    54080 
    54081 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
    54082 
    54083 > show #6.2/a:2580-2585,3019
    54084 
    54085 > show #6.2/Y:72-76/v:2-6
    54086 
    54087 > show #1.12/a:1670-1674
    54088 
    54089 > style #6.2/a:2552@CM2 sphere
    54090 
    54091 Changed 1 atom style 
    54092 
    54093 > size #6.2/a:2552@CM2 atomRadius 0.9
    54094 
    54095 Changed 1 atom radii 
    54096 
    54097 > color #6.2/a:2549-2559 cadet blue
    54098 
    54099 > color #6.2/a:2602 #8770B5
    54100 
    54101 > color #6.2/a:2506 green yellow
    54102 
    54103 > color #6.2/a:2580-2585,3019 crimson
    54104 
    54105 > color #1.12 gray
    54106 
    54107 > volume #4.2 level 0.5
    54108 
    54109 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | #6.2/a:2549-2559 | (#6.2/a:2602,2506&sideonly) | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    54110 
    54111 > volume #4.2 level 0.3
    54112 
    54113 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly)
    54114 
    54115 > volume #4.2 level 0.25
    54116 
    54117 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly)
    54118 
    54119 > volume #4.2 level 0.25
    54120 
    54121 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly) modelId 999
    54122 
    54123 > volume #4.2 level 0.25
    54124 
    54125 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly) newMap true modelId 999
    54126 
    54127 Opened d9_J85_cl2 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    54128 shown at step 1, values float32 
    54129 
    54130 > volume #4.2 level 0.25
    54131 
    54132 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly) newMap true modelId 999
    54133 
    54134 Tried to create model #999 which already exists 
    54135 
    54136 > close #999
    54137 
    54138 > volume #4.2 level 0.25
    54139 
    54140 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly) newMap true modelId 999
    54141 
    54142 Opened d9_J85_cl2 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    54143 shown at step 1, values float32 
    54144 
    54145 > color #999 gray
    54146 
    54147 > close #999
    54148 
    54149 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly) newMap true modelId 999
    54150 
    54151 Opened d9_J85_cl2 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    54152 shown at step 1, values float32 
    54153 
    54154 > color #999 gray
    54155 
    54156 > volume #999 level 0.25
    54157 
    54158 > close #999
    54159 
    54160 > hide #!1.12#!4.2#!6.2 models
    54161 
    54162 > show #!1.12#!4.2#!6.2 models
    54163 
    54164 > show #6.2/a:2550-2558
    54165 
    54166 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
    54167 
    54168 > show #6.2/a:2580-2585,3019
    54169 
    54170 > show #6.2/Y:72-76/v:2-6
    54171 
    54172 > show #1.12/a:1670-1674
    54173 
    54174 > style #6.2/a:2552@CM2 sphere
    54175 
    54176 Changed 1 atom style 
    54177 
    54178 > size #6.2/a:2552@CM2 atomRadius 0.6
    54179 
    54180 Changed 1 atom radii 
    54181 
    54182 > color #6.2/a:2549-2559 cadet blue
    54183 
    54184 > color #6.2/a:2602 #8770B5
    54185 
    54186 > color #6.2/a:2506 green yellow
    54187 
    54188 > color #6.2/a:2580-2585,3019 crimson
    54189 
    54190 > color #1.12 gray
    54191 
    54192 > volume #4.2 level 0.5
    54193 
    54194 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | #6.2/a:2549-2559 | (#6.2/a:2602,2506&sideonly) | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    54195 
    54196 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly) newMap true modelId 999
    54197 
    54198 Opened d9_J85_cl2 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    54199 shown at step 1, values float32 
    54200 
    54201 > color #999 gray
    54202 
    54203 > volume #999 level 0.25
    54204 
    54205 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.2.png width 800
    54206 > height 600 supersample 4
    54207 
    54208 > show #!4.2 models
    54209 
    54210 > hide #!4.2 models
    54211 
    54212 > show #!4.2 models
    54213 
    54214 > hide #!4.2 models
    54215 
    54216 > show #!4.2 models
    54217 
    54218 > close #999
    54219 
    54220 > hide #!1.12#!4.2#!6.2 models
    54221 
    54222 > show #!1.12#!4.2#!6.2 models
    54223 
    54224 > show #6.2/a:2550-2558
    54225 
    54226 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
    54227 
    54228 > show #6.2/a:2580-2585,3019
    54229 
    54230 > show #6.2/Y:72-76/v:2-6
    54231 
    54232 > show #1.12/a:1670-1674
    54233 
    54234 > style #6.2/a:2552@CM2 sphere
    54235 
    54236 Changed 1 atom style 
    54237 
    54238 > size #6.2/a:2552@CM2 atomRadius 0.6
    54239 
    54240 Changed 1 atom radii 
    54241 
    54242 > color #6.2/a:2549-2559 cadet blue
    54243 
    54244 > color #6.2/a:2602 #8770B5
    54245 
    54246 > color #6.2/a:2506 green yellow
    54247 
    54248 > color #6.2/a:2580-2585,3019 crimson
    54249 
    54250 > color #1.12 gray
    54251 
    54252 > volume #4.2 level 0.5
    54253 
    54254 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | #6.2/a:2549-2559 | (#6.2/a:2602,2506&sideonly) | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    54255 
    54256 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly) newMap true modelId 999
    54257 
    54258 Opened d9_J85_cl2 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    54259 shown at step 1, values float32 
    54260 
    54261 > color #999 gray
    54262 
    54263 > volume #999 level 0.25
    54264 
    54265 > show #!4.2 models
    54266 
    54267 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.2.png width 800
    54268 > height 600 supersample 4
    54269 
    54270 > close #999
    54271 
    54272 > hide #!1.12#!4.2#!6.2 models
    54273 
    54274 > show #!1.12#!4.4#!6.4 models
    54275 
    54276 > show #6.4/a:2550-2558
    54277 
    54278 > show #6.4/a:2602&sidechain | #6.4/a:2602@C5',O3'
    54279 
    54280 > show #6.4/a:2506&sidechain
    54281 
    54282 > show #6.4/a:2580-2585,3019
    54283 
    54284 > show #6.4/Y:72-76/v:2-6
    54285 
    54286 > show #1.12/a:1670-1674
    54287 
    54288 > style #6.4/a:2552@CM2 sphere
    54289 
    54290 Changed 1 atom style 
    54291 
    54292 > size #6.4/a:2552@CM2 atomRadius 0.6
    54293 
    54294 Changed 1 atom radii 
    54295 
    54296 > color #6.4/a:2549-2559 cadet blue
    54297 
    54298 > color #6.4/a:2602 #8770B5
    54299 
    54300 > color #6.4/a:2506 green yellow
    54301 
    54302 > color #6.4/a:2580-2585,3019 crimson
    54303 
    54304 > color #1.12 gray
    54305 
    54306 > volume #4.4 level 0.5
    54307 
    54308 > volume zone #4.4 range 2 nearAtoms #6.4/v:2-5 | #6.4/Y:72-76 | #6.4/a:2549-2559 | (#6.4/a:2602,2506&sideonly) | #6.4/a:2580-2585 | #6.4/a:3019 | #1.12/a:1672
    54309 
    54310 > volume #4.4 level 0.3
    54311 
    54312 > volume #4.4 level 0.4
    54313 
    54314 > volume #4.4 level 0.45
    54315 
    54316 > show #!2.2 models
    54317 
    54318 > hide #!2.2 models
    54319 
    54320 > show #!2.2 models
    54321 
    54322 > hide #!2.2 models
    54323 
    54324 > show #!2.3 models
    54325 
    54326 > hide #!2.3 models
    54327 
    54328 > show #!2.4 models
    54329 
    54330 > hide #!2.4 models
    54331 
    54332 > hide #!1.12#!4.4#!6.4 models
    54333 
    54334 > show #!1.12#!4.6#!6.6 models
    54335 
    54336 > show #6.6/a:2550-2558
    54337 
    54338 > show #6.6/a:2602&sidechain | #6.6/a:2602@C5',O3'
    54339 
    54340 > show #6.6/a:2506&sidechain
    54341 
    54342 > show #6.6/a:2580-2585,3019
    54343 
    54344 > show #6.6/Y:72-76/v:2-6
    54345 
    54346 > show #1.12/a:1670-1674
    54347 
    54348 > style #6.6/a:2552@CM2 sphere
    54349 
    54350 Changed 1 atom style 
    54351 
    54352 > size #6.6/a:2552@CM2 atomRadius 0.6
    54353 
    54354 Changed 1 atom radii 
    54355 
    54356 > color #6.6/a:2549-2559 cadet blue
    54357 
    54358 > color #6.6/a:2602 #8770B5
    54359 
    54360 > color #6.6/a:2506 green yellow
    54361 
    54362 > color #6.6/a:2580-2585,3019 crimson
    54363 
    54364 > color #1.12 gray
    54365 
    54366 > volume #4.6 level 0.5
    54367 
    54368 > volume zone #4.6 range 2 nearAtoms #6.6/v:2-5 | #6.6/Y:72-76 | #6.6/a:2549-2559 | (#6.6/a:2602,2506&sideonly) | #6.6/a:2580-2585 | #6.6/a:3019 | #1.12/a:1672
    54369 
    54370 > volume #4.6 level 0.3
    54371 
    54372 > volume #4.6 level 0.35
    54373 
    54374 > volume #4.6 level 0.25
    54375 
    54376 > volume #4.6 level 0.3
    54377 
    54378 > volume #4.6 level 0.25
    54379 
    54380 > volume #4.6 level 0.5
    54381 
    54382 > hide #!6.6 models
    54383 
    54384 > hide #!1.12 models
    54385 
    54386 > hide #!4.6 models
    54387 
    54388 > show #!1.12#!4.2#!6.2 models
    54389 
    54390 > show #6.2/a:2550-2558
    54391 
    54392 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
    54393 
    54394 > show #6.2/a:2580-2585,3019
    54395 
    54396 > show #6.2/Y:72-76/v:2-6
    54397 
    54398 > show #1.12/a:1670-1674
    54399 
    54400 > style #6.2/a:2552@CM2 sphere
    54401 
    54402 Changed 1 atom style 
    54403 
    54404 > size #6.2/a:2552@CM2 atomRadius 0.6
    54405 
    54406 Changed 1 atom radii 
    54407 
    54408 > color #6.2/a:2549-2559 cadet blue
    54409 
    54410 > color #6.2/a:2602 #8770B5
    54411 
    54412 > color #6.2/a:2506 green yellow
    54413 
    54414 > color #6.2/a:2580-2585,3019 crimson
    54415 
    54416 > color #1.12 gray
    54417 
    54418 > volume #4.2 level 0.5
    54419 
    54420 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | #6.2/a:2549-2559 | (#6.2/a:2602,2506&sideonly) | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    54421 
    54422 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly) newMap true modelId 999
    54423 
    54424 Opened d9_J85_cl2 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    54425 shown at step 1, values float32 
    54426 
    54427 > color #999 bisque
    54428 
    54429 > volume #999 level 0.25
    54430 
    54431 > show #!4.2 models
    54432 
    54433 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.2.png width 800
    54434 > height 600 supersample 4
    54435 
    54436 > close #999
    54437 
    54438 > hide #!1.12#!4.2#!6.2 models
    54439 
    54440 > show #!1.12#!4.2#!6.2 models
    54441 
    54442 > show #6.2/a:2550-2558
    54443 
    54444 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
    54445 
    54446 > show #6.2/a:2580-2585,3019
    54447 
    54448 > show #6.2/Y:72-76/v:2-6
    54449 
    54450 > show #1.12/a:1670-1674
    54451 
    54452 > style #6.2/a:2552@CM2 sphere
    54453 
    54454 Changed 1 atom style 
    54455 
    54456 > size #6.2/a:2552@CM2 atomRadius 0.6
    54457 
    54458 Changed 1 atom radii 
    54459 
    54460 > color #6.2/a:2549-2559 cadet blue
    54461 
    54462 > color #6.2/a:2602 #8770B5
    54463 
    54464 > color #6.2/a:2506 green yellow
    54465 
    54466 > color #6.2/a:2580-2585,3019 crimson
    54467 
    54468 > color #1.12 gray
    54469 
    54470 > volume #4.2 level 0.5
    54471 
    54472 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | #6.2/a:2549-2559 | (#6.2/a:2602,2506&sideonly) | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    54473 
    54474 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly) newMap true modelId 999
    54475 
    54476 Opened d9_J85_cl2 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    54477 shown at step 1, values float32 
    54478 
    54479 > color #999 bisque
    54480 
    54481 > volume #999 level 0.25
    54482 
    54483 > show #!4.2 models
    54484 
    54485 > color #999 sandy brown
    54486 
    54487 > volume #999 level 0.25
    54488 
    54489 > show #!4.2 models
    54490 
    54491 > color #999 peru
    54492 
    54493 > volume #999 level 0.25
    54494 
    54495 > show #!4.2 models
    54496 
    54497 > color #999 peach puff
    54498 
    54499 > volume #999 level 0.25
    54500 
    54501 > show #!4.2 models
    54502 
    54503 > color #999 navajo white
    54504 
    54505 > volume #999 level 0.25
    54506 
    54507 > show #!4.2 models
    54508 
    54509 > color #999 bisque
    54510 
    54511 > volume #999 level 0.25
    54512 
    54513 > show #!4.2 models
    54514 
    54515 > color #999 tan
    54516 
    54517 > volume #999 level 0.25
    54518 
    54519 > show #!4.2 models
    54520 
    54521 > color #999 cornflower blue
    54522 
    54523 > volume #999 level 0.25
    54524 
    54525 > show #!4.2 models
    54526 
    54527 > color #999 light steel blue
    54528 
    54529 > volume #999 level 0.25
    54530 
    54531 > show #!4.2 models
    54532 
    54533 > color #999 steel blue
    54534 
    54535 > volume #999 level 0.25
    54536 
    54537 > show #!4.2 models
    54538 
    54539 > show #!1.12#!4.2#!6.2 models
    54540 
    54541 > show #6.2/a:2550-2558
    54542 
    54543 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
    54544 
    54545 > show #6.2/a:2580-2585,3019
    54546 
    54547 > show #6.2/Y:72-76/v:2-6
    54548 
    54549 > show #1.12/a:1670-1674
    54550 
    54551 > style #6.2/a:2552@CM2 sphere
    54552 
    54553 Changed 1 atom style 
    54554 
    54555 > size #6.2/a:2552@CM2 atomRadius 0.6
    54556 
    54557 Changed 1 atom radii 
    54558 
    54559 > color #6.2/a:2549-2559 cadet blue
    54560 
    54561 > color #6.2/a:2602 #8770B5
    54562 
    54563 > color #6.2/a:2506 green yellow
    54564 
    54565 > color #6.2/a:2580-2585,3019 crimson
    54566 
    54567 > color #1.12 gray
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    54569 > volume #4.2 level 0.5
    54570 
    54571 > volume zone #4.2 range 2 nearAtoms #6.2/a:2549-2559 | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    54572 
    54573 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly) newMap true modelId 999
    54574 
    54575 Tried to create model #999 which already exists 
    54576 
    54577 > color #999 steel blue
    54578 
    54579 > volume #999 level 0.25
    54580 
    54581 > show #!4.2 models
    54582 
    54583 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.2.png width 800
    54584 > height 600 supersample 4
    54585 
    54586 > close #999
    54587 
    54588 > hide #!1.12#!4.2#!6.2 models
    54589 
    54590 > show #!1.12#!4.2#!6.2 models
    54591 
    54592 > show #6.2/a:2550-2558
    54593 
    54594 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
    54595 
    54596 > show #6.2/a:2580-2585,3019
    54597 
    54598 > show #6.2/Y:72-76/v:2-6
    54599 
    54600 > show #1.12/a:1670-1674
    54601 
    54602 > style #6.2/a:2552@CM2 sphere
    54603 
    54604 Changed 1 atom style 
    54605 
    54606 > size #6.2/a:2552@CM2 atomRadius 0.6
    54607 
    54608 Changed 1 atom radii 
    54609 
    54610 > color #6.2/a:2549-2559 cadet blue
    54611 
    54612 > color #6.2/a:2602 #8770B5
    54613 
    54614 > color #6.2/a:2506 green yellow
    54615 
    54616 > color #6.2/a:2580-2585,3019 crimson
    54617 
    54618 > color #1.12 gray
    54619 
    54620 > volume #4.2 level 0.5
    54621 
    54622 > volume zone #4.2 range 2 nearAtoms #6.2/a:2549-2559 | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    54623 
    54624 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly) newMap true modelId 999
    54625 
    54626 Opened d9_J85_cl2 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
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    54628 
    54629 > color #999 steel blue
    54630 
    54631 > volume #999 level 0.25
    54632 
    54633 > show #!4.2 models
    54634 
    54635 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.2.png width 800
    54636 > height 600 supersample 4
    54637 
    54638 > close #999
    54639 
    54640 > hide #!1.12#!4.2#!6.2 models
    54641 
    54642 > show #!1.12#!4.6#!6.6 models
    54643 
    54644 > show #6.6/a:2550-2558
    54645 
    54646 > show #6.6/a:2602&sidechain | #6.6/a:2602@C5',O3'
    54647 
    54648 > show #6.6/a:2506&sidechain
    54649 
    54650 > show #6.6/a:2580-2585,3019
    54651 
    54652 > show #6.6/Y:72-76/v:2-6
    54653 
    54654 > show #1.12/a:1670-1674
    54655 
    54656 > style #6.6/a:2552@CM2 sphere
    54657 
    54658 Changed 1 atom style 
    54659 
    54660 > size #6.6/a:2552@CM2 atomRadius 0.6
    54661 
    54662 Changed 1 atom radii 
    54663 
    54664 > color #6.6/a:2549-2559 cadet blue
    54665 
    54666 > color #6.6/a:2602 #8770B5
    54667 
    54668 > color #6.6/a:2506 green yellow
    54669 
    54670 > color #6.6/a:2580-2585,3019 crimson
    54671 
    54672 > color #1.12 gray
    54673 
    54674 > volume #4.6 level 0.5
    54675 
    54676 > volume zone #4.6 range 2 nearAtoms #6.6/a:2549-2559 | #6.6/a:2580-2585 | #6.6/a:3019 | #1.12/a:1672
    54677 
    54678 > volume zone #4.6 range 2 nearAtoms #6.6/v:2-5 | #6.6/Y:72-76 | (#6.6/a:2602&sideonly) newMap true modelId 999
    54679 
    54680 Opened d9_J89_cl6 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    54681 shown at step 1, values float32 
    54682 
    54683 > color #999 gray
    54684 
    54685 > volume #999 level 0.25
    54686 
    54687 > show #!4.6 models
    54688 
    54689 > color #999 steel blue
    54690 
    54691 > volume #999 level 0.25
    54692 
    54693 > show #!4.6 models
    54694 
    54695 > close #999
    54696 
    54697 > volume zone #4.6 range 2 nearAtoms #6.6/v:2-5 | #6.6/Y:72-76 | (#6.6/a:2506,2602&sideonly) newMap true modelId 999
    54698 
    54699 Opened d9_J89_cl6 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    54700 shown at step 1, values float32 
    54701 
    54702 > color #999 steel blue
    54703 
    54704 > volume #999 level 0.25
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    54706 > show #!4.6 models
    54707 
    54708 > color #999 steel blue
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    54710 > volume #999 level 0.30
    54711 
    54712 > show #!4.6 models
    54713 
    54714 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.6.png width 800
    54715 > height 600 supersample 4
    54716 
    54717 > close #999
    54718 
    54719 > hide #!1.12#!4.6#!6.6 models
    54720 
    54721 > show #!1.12#!4.7#!6.7 models
    54722 
    54723 > show #6.7/a:2550-2558
    54724 
    54725 > show #6.7/a:2602&sidechain | #6.7/a:2602@C5',O3'
    54726 
    54727 > show #6.7/a:2580-2585,3019
    54728 
    54729 > show #6.7/Y:72-76/v:2-6
    54730 
    54731 > show #1.12/a:1670-1674
    54732 
    54733 > style #6.7/a:2552@CM2 sphere
    54734 
    54735 Changed 1 atom style 
    54736 
    54737 > size #6.7/a:2552@CM2 atomRadius 0.6
    54738 
    54739 Changed 1 atom radii 
    54740 
    54741 > color #6.7/a:2549-2559 cadet blue
    54742 
    54743 > color #6.7/a:2602 #8770B5
    54744 
    54745 > color #6.7/a:2506 green yellow
    54746 
    54747 > color #6.7/a:2580-2585,3019 crimson
    54748 
    54749 > color #1.12 gray
    54750 
    54751 > volume #4.7 level 0.5
    54752 
    54753 > volume zone #4.7 range 2 nearAtoms #6.7/v:2-5 | #6.7/Y:72-76 | #6.7/a:2549-2559 | (#6.7/a:2602,2506&sideonly) | #6.7/a:2580-2585 | #6.7/a:3019 | #1.12/a:1672
    54754 
    54755 > volume zone #4.7 range 2 nearAtoms #6.7/v:2-5 | #6.7/Y:72-76 | (#6.7/a:2506,2602&sideonly) newMap true modelId 999
    54756 
    54757 Opened d9_J90_cl7 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    54758 shown at step 1, values float32 
    54759 
    54760 > color #999 steel blue
    54761 
    54762 > volume #999 level 0.30
    54763 
    54764 > show #!4.7 models
    54765 
    54766 > color #999 light steel blue
    54767 
    54768 > volume #999 level 0.30
    54769 
    54770 > show #!4.7 models
    54771 
    54772 > color #999 azure
    54773 
    54774 > volume #999 level 0.30
    54775 
    54776 > show #!4.7 models
    54777 
    54778 > color #999 gainsboro
    54779 
    54780 > volume #999 level 0.30
    54781 
    54782 > show #!4.7 models
    54783 
    54784 > color #999 silver
    54785 
    54786 > volume #999 level 0.30
    54787 
    54788 > show #!4.7 models
    54789 
    54790 > color #999 light cyan
    54791 
    54792 > volume #999 level 0.30
    54793 
    54794 > show #!4.7 models
    54795 
    54796 > color #999 light sky blue
    54797 
    54798 > volume #999 level 0.30
    54799 
    54800 > show #!4.7 models
    54801 
    54802 > color #999 light sky blue
    54803 
    54804 > volume #999 level 0.4
    54805 
    54806 > show #!4.7 models
    54807 
    54808 > color #999 light sky blue
    54809 
    54810 > volume #999 level 0.35
    54811 
    54812 > show #!4.7 models
    54813 
    54814 > color #999 light sky blue
    54815 
    54816 > volume #999 level 0.38
    54817 
    54818 > show #!4.7 models
    54819 
    54820 > color #999 light sky blue
    54821 
    54822 > volume #999 level 0.39
    54823 
    54824 > show #!4.7 models
    54825 
    54826 > close #999
    54827 
    54828 > show #!1.12#!4.7#!6.7 models
    54829 
    54830 > show #6.7/a:2550-2558
    54831 
    54832 > show #6.7/a:2602&sidechain | #6.7/a:2602@C5',O3'
    54833 
    54834 > show #6.7/a:2580-2585,3019
    54835 
    54836 > show #6.7/Y:72-76/v:2-6
    54837 
    54838 > show #1.12/a:1670-1674
    54839 
    54840 > style #6.7/a:2552@CM2 sphere
    54841 
    54842 Changed 1 atom style 
    54843 
    54844 > size #6.7/a:2552@CM2 atomRadius 0.6
    54845 
    54846 Changed 1 atom radii 
    54847 
    54848 > color #6.7/a:2549-2559 cadet blue
    54849 
    54850 > color #6.7/a:2602 #8770B5
    54851 
    54852 > color #6.7/a:2506 green yellow
    54853 
    54854 > color #6.7/a:2580-2585,3019 crimson
    54855 
    54856 > color #1.12 gray
    54857 
    54858 > volume #4.7 level 0.5
    54859 
    54860 > volume zone #4.7 range 2 nearAtoms #6.7/a:2549-2559 | #6.7/a:2580-2585 | #6.7/a:3019 | #1.12/a:1672
    54861 
    54862 > volume zone #4.7 range 2 nearAtoms #6.7/v:2-5 | #6.7/Y:72-76 | (#6.7/a:2506,2602&sideonly) newMap true modelId 999
    54863 
    54864 Opened d9_J90_cl7 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    54865 shown at step 1, values float32 
    54866 
    54867 > color #999 light sky blue
    54868 
    54869 > volume #999 level 0.39
    54870 
    54871 > show #!4.7 models
    54872 
    54873 > close #999
    54874 
    54875 > hide #!1.12#!4.7#!6.7 models
    54876 
    54877 > show #!1.12#!4.8#!6.8 models
    54878 
    54879 > show #6.8/a:2550-2558
    54880 
    54881 > show #6.8/a:2602&sidechain | #6.8/a:2602@C5',O3'
    54882 
    54883 > show #6.8/a:2506&sidechain
    54884 
    54885 > show #6.8/a:2580-2585,3019
    54886 
    54887 > show #6.8/Y:72-76/v:2-6
    54888 
    54889 > show #1.12/a:1670-1674
    54890 
    54891 > style #6.8/a:2552@CM2 sphere
    54892 
    54893 Changed 1 atom style 
    54894 
    54895 > size #6.8/a:2552@CM2 atomRadius 0.6
    54896 
    54897 Changed 1 atom radii 
    54898 
    54899 > color #6.8/a:2549-2559 cadet blue
    54900 
    54901 > color #6.8/a:2602 #8770B5
    54902 
    54903 > color #6.8/a:2506 green yellow
    54904 
    54905 > color #6.8/a:2580-2585,3019 crimson
    54906 
    54907 > color #1.12 gray
    54908 
    54909 > volume #4.8 level 0.5
    54910 
    54911 > volume zone #4.8 range 2 nearAtoms #6.8/v:2-5 | #6.8/Y:72-76 | #6.8/a:2549-2559 | #6.8/a:2580-2585 | #6.8/a:3019 | #1.12/a:1672
    54912 
    54913 > volume zone #4.7 range 2 nearAtoms (#6.8/a:2602,2506&sideonly) newMap true
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    54915 
    54916 Opened d9_J90_cl7 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    54917 shown at step 1, values float32 
    54918 
    54919 > color #999 light sky blue
    54920 
    54921 > volume #999 level 0.30
    54922 
    54923 > show #!4.8 models
    54924 
    54925 > volume #999 level 0.25
    54926 
    54927 > close #999
    54928 
    54929 > hide #!1.12#!4.8#!6.8 models
    54930 
    54931 > show #!1.12#!4.9#!6.9 models
    54932 
    54933 > show #6.9/a:2550-2558
    54934 
    54935 > show #6.9/a:2602&sidechain | #6.9/a:2602@C5',O3'
    54936 
    54937 > show #6.9/a:2580-2585,3019
    54938 
    54939 > show #6.9/Y:72-76/v:2-6
    54940 
    54941 > show #1.12/a:1670-1674
    54942 
    54943 > style #6.9/a:2552@CM2 sphere
    54944 
    54945 Changed 1 atom style 
    54946 
    54947 > size #6.9/a:2552@CM2 atomRadius 0.6
    54948 
    54949 Changed 1 atom radii 
    54950 
    54951 > color #6.9/a:2549-2559 cadet blue
    54952 
    54953 > color #6.9/a:2602 #8770B5
    54954 
    54955 > color #6.9/a:2506 green yellow
    54956 
    54957 > color #6.9/a:2580-2585,3019 crimson
    54958 
    54959 > color #1.12 gray
    54960 
    54961 > volume #4.9 level 0.5
    54962 
    54963 > volume zone #4.9 range 2 nearAtoms #6.9/v:2-5 | #6.9/Y:72-76 | #6.9/a:2549-2559 | (#6.9/a:2602,2506&sideonly) | #6.9/a:2580-2585 | #6.9/a:3019 | #1.12/a:1672
    54964 
    54965 > hide #6.*/a:2506
    54966 
    54967 > volume zone #4.9 range 2 nearAtoms #6.9/a:2549-2559 | #6.9/a:2580-2585 | #6.9/a:3019 | #1.12/a:1672
    54968 
    54969 > volume zone #4.9 range 2 nearAtoms #6.9/v:2-5 | #6.9/Y:72-76 | (#6.9/a:2602&sideonly) newMap true modelId 999
    54970 
    54971 Opened d9_J92_cl9 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    54972 shown at step 1, values float32 
    54973 
    54974 > color #999 light sky blue
    54975 
    54976 > volume #999 level 0.25
    54977 
    54978 > show #!4.9 models
    54979 
    54980 > color #999 light sky blue
    54981 
    54982 > volume #999 level 0.35
    54983 
    54984 > show #!4.9 models
    54985 
    54986 > color #999 light sky blue
    54987 
    54988 > volume #999 level 0.4
    54989 
    54990 > show #!4.9 models
    54991 
    54992 > color #999 light sky blue
    54993 
    54994 > volume #999 level 0.3
    54995 
    54996 > show #!4.9 models
    54997 
    54998 > close #999
    54999 
    55000 > hide #!1.12#!4.9#!6.9 models
    55001 
    55002 > show #!1.12#!4.1#!6.1 models
    55003 
    55004 > show #6.1/a:2550-2558
    55005 
    55006 > show #6.1/a:2602&sidechain | #6.1/a:2602@C5',O3'
    55007 
    55008 > show #6.1/a:2580-2585,3019
    55009 
    55010 > show #6.1/Y:72-76/v:2-6
    55011 
    55012 > show #1.12/a:1670-1674
    55013 
    55014 > style #6.1/a:2552@CM2 sphere
    55015 
    55016 Changed 1 atom style 
    55017 
    55018 > size #6.1/a:2552@CM2 atomRadius 0.6
    55019 
    55020 Changed 1 atom radii 
    55021 
    55022 > color #6.1/a:2549-2559 cadet blue
    55023 
    55024 > color #6.1/a:2602 #8770B5
    55025 
    55026 > color #6.1/a:2506 green yellow
    55027 
    55028 > color #6.1/a:2580-2585,3019 crimson
    55029 
    55030 > color #1.12 gray
    55031 
    55032 > volume #4.1 level 0.5
    55033 
    55034 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-5 | #6.1/Y:72-76 | #6.1/a:2549-2559 | (#6.1/a:2602,2506&sideonly) | #6.1/a:2580-2585 | #6.1/a:3019 | #1.12/a:1672
    55035 
    55036 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.1.png width 800
    55037 > height 600 supersample 4
    55038 
    55039 > hide #!1.12#!4.1#!6.1 models
    55040 
    55041 > show #!1.12#!4.2#!6.2 models
    55042 
    55043 > show #6.2/a:2550-2558
    55044 
    55045 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
    55046 
    55047 > show #6.2/a:2580-2585,3019
    55048 
    55049 > show #6.2/Y:72-76/v:2-6
    55050 
    55051 > show #1.12/a:1670-1674
    55052 
    55053 > style #6.2/a:2552@CM2 sphere
    55054 
    55055 Changed 1 atom style 
    55056 
    55057 > size #6.2/a:2552@CM2 atomRadius 0.6
    55058 
    55059 Changed 1 atom radii 
    55060 
    55061 > color #6.2/a:2549-2559 cadet blue
    55062 
    55063 > color #6.2/a:2602 #8770B5
    55064 
    55065 > color #6.2/a:2506 green yellow
    55066 
    55067 > color #6.2/a:2580-2585,3019 crimson
    55068 
    55069 > color #1.12 gray
    55070 
    55071 > volume #4.2 level 0.5
    55072 
    55073 > volume zone #4.2 range 2 nearAtoms #6.2/a:2549-2559 | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    55074 
    55075 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly) newMap true modelId 999
    55076 
    55077 Opened d9_J85_cl2 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
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    55079 
    55080 > color #999 light sky blue
    55081 
    55082 > volume #999 level 0.25
    55083 
    55084 > show #!4.2 models
    55085 
    55086 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.2.png width 800
    55087 > height 600 supersample 4
    55088 
    55089 > close #999
    55090 
    55091 > hide #!1.12#!4.2#!6.2 models
    55092 
    55093 > show #!1.12#!4.3#!6.3 models
    55094 
    55095 > show #6.3/a:2550-2558
    55096 
    55097 > show #6.3/a:2580-2585,3019
    55098 
    55099 > show #6.3/Y:72-76/v:2-6
    55100 
    55101 > show #1.12/a:1670-1674
    55102 
    55103 > style #6.3/a:2552@CM2 sphere
    55104 
    55105 Changed 1 atom style 
    55106 
    55107 > size #6.3/a:2552@CM2 atomRadius 0.6
    55108 
    55109 Changed 1 atom radii 
    55110 
    55111 > color #6.3/a:2549-2559 cadet blue
    55112 
    55113 > color #6.3/a:2602 #8770B5
    55114 
    55115 > color #6.3/a:2506 green yellow
    55116 
    55117 > color #6.3/a:2580-2585,3019 crimson
    55118 
    55119 > color #1.12 gray
    55120 
    55121 > volume #4.3 level 0.5
    55122 
    55123 > volume zone #4.3 range 2 nearAtoms #6.3/v:2-5 | #6.3/Y:72-76 | #6.3/a:2549-2559 | (#6.3/a:2602,2506&sideonly) | #6.3/a:2580-2585 | #6.3/a:3019 | #1.12/a:1672
    55124 
    55125 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.3.png width 800
    55126 > height 600 supersample 4
    55127 
    55128 > hide #!1.12#!4.3#!6.3 models
    55129 
    55130 > show #!1.12#!4.4#!6.4 models
    55131 
    55132 > show #6.4/a:2550-2558
    55133 
    55134 > show #6.4/a:2602&sidechain | #6.4/a:2602@C5',O3'
    55135 
    55136 > show #6.4/a:2506&sidechain
    55137 
    55138 > show #6.4/a:2580-2585,3019
    55139 
    55140 > show #6.4/Y:72-76/v:2-6
    55141 
    55142 > show #1.12/a:1670-1674
    55143 
    55144 > style #6.4/a:2552@CM2 sphere
    55145 
    55146 Changed 1 atom style 
    55147 
    55148 > size #6.4/a:2552@CM2 atomRadius 0.6
    55149 
    55150 Changed 1 atom radii 
    55151 
    55152 > color #6.4/a:2549-2559 cadet blue
    55153 
    55154 > color #6.4/a:2602 #8770B5
    55155 
    55156 > color #6.4/a:2506 green yellow
    55157 
    55158 > color #6.4/a:2580-2585,3019 crimson
    55159 
    55160 > color #1.12 gray
    55161 
    55162 > volume #4.4 level 0.5
    55163 
    55164 > volume zone #4.4 range 2 nearAtoms #6.4/v:2-5 | #6.4/Y:72-76 | #6.4/a:2549-2559 | (#6.4/a:2602,2506&sideonly) | #6.4/a:2580-2585 | #6.4/a:3019 | #1.12/a:1672
    55165 
    55166 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.4.png width 800
    55167 > height 600 supersample 4
    55168 
    55169 > hide #!1.12#!4.4#!6.4 models
    55170 
    55171 > show #!1.12#!4.5#!6.5 models
    55172 
    55173 > show #6.5/a:2550-2558
    55174 
    55175 > show #6.5/a:2602&sidechain | #6.5/a:2602@C5',O3'
    55176 
    55177 > show #6.5/a:2506&sidechain
    55178 
    55179 > show #6.5/a:2580-2585,3019
    55180 
    55181 > show #6.5/Y:72-76/v:2-6
    55182 
    55183 > show #1.12/a:1670-1674
    55184 
    55185 > style #6.5/a:2552@CM2 sphere
    55186 
    55187 Changed 1 atom style 
    55188 
    55189 > size #6.5/a:2552@CM2 atomRadius 0.6
    55190 
    55191 Changed 1 atom radii 
    55192 
    55193 > color #6.5/a:2549-2559 cadet blue
    55194 
    55195 > color #6.5/a:2602 #8770B5
    55196 
    55197 > color #6.5/a:2506 green yellow
    55198 
    55199 > color #6.5/a:2580-2585,3019 crimson
    55200 
    55201 > color #1.12 gray
    55202 
    55203 > volume #4.5 level 0.5
    55204 
    55205 > volume zone #4.5 range 2 nearAtoms #6.5/v:2-5 | #6.5/Y:72-76 | #6.5/a:2549-2559 | (#6.5/a:2602,2506&sideonly) | #6.5/a:2580-2585 | #6.5/a:3019 | #1.12/a:1672
    55206 
    55207 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.5.png width 800
    55208 > height 600 supersample 4
    55209 
    55210 > hide #!1.12#!4.5#!6.5 models
    55211 
    55212 > show #!1.12#!4.6#!6.6 models
    55213 
    55214 > show #6.6/a:2550-2558
    55215 
    55216 > show #6.6/a:2602&sidechain | #6.6/a:2602@C5',O3'
    55217 
    55218 > show #6.6/a:2506&sidechain
    55219 
    55220 > show #6.6/a:2580-2585,3019
    55221 
    55222 > show #6.6/Y:72-76/v:2-6
    55223 
    55224 > show #1.12/a:1670-1674
    55225 
    55226 > style #6.6/a:2552@CM2 sphere
    55227 
    55228 Changed 1 atom style 
    55229 
    55230 > size #6.6/a:2552@CM2 atomRadius 0.6
    55231 
    55232 Changed 1 atom radii 
    55233 
    55234 > color #6.6/a:2549-2559 cadet blue
    55235 
    55236 > color #6.6/a:2602 #8770B5
    55237 
    55238 > color #6.6/a:2506 green yellow
    55239 
    55240 > color #6.6/a:2580-2585,3019 crimson
    55241 
    55242 > color #1.12 gray
    55243 
    55244 > volume #4.6 level 0.5
    55245 
    55246 > volume zone #4.6 range 2 nearAtoms #6.6/a:2549-2559 | #6.6/a:2580-2585 | #6.6/a:3019 | #1.12/a:1672
    55247 
    55248 > volume zone #4.6 range 2 nearAtoms #6.6/v:2-5 | #6.6/Y:72-76 | (#6.6/a:2506,2602&sideonly) newMap true modelId 999
    55249 
    55250 Opened d9_J89_cl6 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    55251 shown at step 1, values float32 
    55252 
    55253 > color #999 light sky blue
    55254 
    55255 > volume #999 level 0.30
    55256 
    55257 > show #!4.6 models
    55258 
    55259 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.6.png width 800
    55260 > height 600 supersample 4
    55261 
    55262 > close #999
    55263 
    55264 > hide #!1.12#!4.6#!6.6 models
    55265 
    55266 > show #!1.12#!4.7#!6.7 models
    55267 
    55268 > show #6.7/a:2550-2558
    55269 
    55270 > show #6.7/a:2602&sidechain | #6.7/a:2602@C5',O3'
    55271 
    55272 > show #6.7/a:2580-2585,3019
    55273 
    55274 > show #6.7/Y:72-76/v:2-6
    55275 
    55276 > show #1.12/a:1670-1674
    55277 
    55278 > style #6.7/a:2552@CM2 sphere
    55279 
    55280 Changed 1 atom style 
    55281 
    55282 > size #6.7/a:2552@CM2 atomRadius 0.6
    55283 
    55284 Changed 1 atom radii 
    55285 
    55286 > color #6.7/a:2549-2559 cadet blue
    55287 
    55288 > color #6.7/a:2602 #8770B5
    55289 
    55290 > color #6.7/a:2506 green yellow
    55291 
    55292 > color #6.7/a:2580-2585,3019 crimson
    55293 
    55294 > color #1.12 gray
    55295 
    55296 > volume #4.7 level 0.5
    55297 
    55298 > volume zone #4.7 range 2 nearAtoms #6.7/a:2549-2559 | #6.7/a:2580-2585 | #6.7/a:3019 | #1.12/a:1672
    55299 
    55300 > volume zone #4.7 range 2 nearAtoms #6.7/v:2-5 | #6.7/Y:72-76 | (#6.7/a:2506,2602&sideonly) newMap true modelId 999
    55301 
    55302 Opened d9_J90_cl7 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    55303 shown at step 1, values float32 
    55304 
    55305 > color #999 light sky blue
    55306 
    55307 > volume #999 level 0.39
    55308 
    55309 > show #!4.7 models
    55310 
    55311 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.7.png width 800
    55312 > height 600 supersample 4
    55313 
    55314 > close #999
    55315 
    55316 > hide #!1.12#!4.7#!6.7 models
    55317 
    55318 > show #!1.12#!4.8#!6.8 models
    55319 
    55320 > show #6.8/a:2550-2558
    55321 
    55322 > show #6.8/a:2602&sidechain | #6.8/a:2602@C5',O3'
    55323 
    55324 > show #6.8/a:2506&sidechain
    55325 
    55326 > show #6.8/a:2580-2585,3019
    55327 
    55328 > show #6.8/Y:72-76/v:2-6
    55329 
    55330 > show #1.12/a:1670-1674
    55331 
    55332 > style #6.8/a:2552@CM2 sphere
    55333 
    55334 Changed 1 atom style 
    55335 
    55336 > size #6.8/a:2552@CM2 atomRadius 0.6
    55337 
    55338 Changed 1 atom radii 
    55339 
    55340 > color #6.8/a:2549-2559 cadet blue
    55341 
    55342 > color #6.8/a:2602 #8770B5
    55343 
    55344 > color #6.8/a:2506 green yellow
    55345 
    55346 > color #6.8/a:2580-2585,3019 crimson
    55347 
    55348 > color #1.12 gray
    55349 
    55350 > volume #4.8 level 0.5
    55351 
    55352 > volume zone #4.8 range 2 nearAtoms #6.8/v:2-5 | #6.8/Y:72-76 | #6.8/a:2549-2559 | #6.8/a:2580-2585 | #6.8/a:3019 | #1.12/a:1672
    55353 
    55354 > volume zone #4.7 range 2 nearAtoms (#6.8/a:2602,2506&sideonly) newMap true
    55355 > modelId 999
    55356 
    55357 Opened d9_J90_cl7 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    55358 shown at step 1, values float32 
    55359 
    55360 > color #999 light sky blue
    55361 
    55362 > volume #999 level 0.25
    55363 
    55364 > show #!4.8 models
    55365 
    55366 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.8.png width 800
    55367 > height 600 supersample 4
    55368 
    55369 > close #999
    55370 
    55371 > hide #!1.12#!4.8#!6.8 models
    55372 
    55373 > show #!1.12#!4.9#!6.9 models
    55374 
    55375 > show #6.9/a:2550-2558
    55376 
    55377 > show #6.9/a:2602&sidechain | #6.9/a:2602@C5',O3'
    55378 
    55379 > show #6.9/a:2580-2585,3019
    55380 
    55381 > show #6.9/Y:72-76/v:2-6
    55382 
    55383 > show #1.12/a:1670-1674
    55384 
    55385 > style #6.9/a:2552@CM2 sphere
    55386 
    55387 Changed 1 atom style 
    55388 
    55389 > size #6.9/a:2552@CM2 atomRadius 0.6
    55390 
    55391 Changed 1 atom radii 
    55392 
    55393 > color #6.9/a:2549-2559 cadet blue
    55394 
    55395 > color #6.9/a:2602 #8770B5
    55396 
    55397 > color #6.9/a:2506 green yellow
    55398 
    55399 > color #6.9/a:2580-2585,3019 crimson
    55400 
    55401 > color #1.12 gray
    55402 
    55403 > volume #4.9 level 0.5
    55404 
    55405 > volume zone #4.9 range 2 nearAtoms #6.9/a:2549-2559 | #6.9/a:2580-2585 | #6.9/a:3019 | #1.12/a:1672
    55406 
    55407 > volume zone #4.9 range 2 nearAtoms #6.9/v:2-5 | #6.9/Y:72-76 | (#6.9/a:2602&sideonly) newMap true modelId 999
    55408 
    55409 Opened d9_J92_cl9 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    55410 shown at step 1, values float32 
    55411 
    55412 > color #999 light sky blue
    55413 
    55414 > volume #999 level 0.30
    55415 
    55416 > show #!4.9 models
    55417 
    55418 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.9.png width 800
    55419 > height 600 supersample 4
    55420 
    55421 > close #999
    55422 
    55423 > hide #!1.12#!4.9#!6.9 models
    55424 
    55425 > show #!1.12#!4.10#!6.10 models
    55426 
    55427 > show #6.10/a:2550-2558
    55428 
    55429 > show #6.10/a:2602&sidechain | #6.10/a:2602@C5',O3'
    55430 
    55431 > show #6.10/a:2506&sidechain
    55432 
    55433 > show #6.10/a:2580-2585,3019
    55434 
    55435 > show #6.10/Y:72-76/v:2-6
    55436 
    55437 > show #1.12/a:1670-1674
    55438 
    55439 > style #6.10/a:2552@CM2 sphere
    55440 
    55441 Changed 1 atom style 
    55442 
    55443 > size #6.10/a:2552@CM2 atomRadius 0.6
    55444 
    55445 Changed 1 atom radii 
    55446 
    55447 > color #6.10/a:2549-2559 cadet blue
    55448 
    55449 > color #6.10/a:2602 #8770B5
    55450 
    55451 > color #6.10/a:2506 green yellow
    55452 
    55453 > color #6.10/a:2580-2585,3019 crimson
    55454 
    55455 > color #1.12 gray
    55456 
    55457 > volume #4.10 level 0.5
    55458 
    55459 > volume zone #4.10 range 2 nearAtoms #6.10/v:2-5 | #6.10/Y:72-76 | #6.10/a:2549-2559 | (#6.10/a:2602,2506&sideonly) | #6.10/a:2580-2585 | #6.10/a:3019 | #1.12/a:1672
    55460 
    55461 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta9_class.0.png width 800
    55462 > height 600 supersample 4
    55463 
    55464 > hide #!1.12#!4.10#!6.10 models
    55465 
    55466 > windowsize 800 600
    55467 
    55468 > show #!1.12#!12.1#!14.1 models
    55469 
    55470 > show #14.1/a:2550-2558
    55471 
    55472 > show #14.1/a:2602&sidechain | #14.1/a:2602@C5',O3'
    55473 
    55474 > show #14.1/a:2506&sidechain
    55475 
    55476 > show #14.1/a:2580-2585,3019
    55477 
    55478 > show #14.1/Y:72-76/v:2-6
    55479 
    55480 > show #1.12/a:1670-1674
    55481 
    55482 > style #14.1/a:2552@CM2 sphere
    55483 
    55484 Changed 0 atom styles 
    55485 
    55486 > size #14.1/a:2552@CM2 atomRadius 0.6
    55487 
    55488 Changed 0 atom radii 
    55489 
    55490 > color #14.1/a:2549-2559 cadet blue
    55491 
    55492 > color #14.1/a:2602 #8770B5
    55493 
    55494 > color #14.1/a:2506 green yellow
    55495 
    55496 > color #14.1/a:2580-2585,3019 crimson
    55497 
    55498 > color #1.12 gray
    55499 
    55500 > volume #12.1 level 0.5
    55501 
    55502 > volume zone #12.1 range 2 nearAtoms #14.1/v:2-5 | #14.1/Y:72-76 | #14.1/a:2549-2559 | (#14.1/a:2602,2506&sideonly) | #14.1/a:2580-2585 | #14.1/a:3019 | #1.12/a:1672
    55503 
    55504 > view matrix camera
    55505 > -0.82811,0.53756,-0.1589,129.71,0.3332,0.24409,-0.91072,115.62,-0.45078,-0.80711,-0.38126,123.29
    55506 
    55507 > ~clip
    55508 
    55509 > clip near -8.5302 far 8.0092
    55510 
    55511 > view matrix camera
    55512 > -0.82811,0.53756,-0.1589,129.71,0.3332,0.24409,-0.91072,115.62,-0.45078,-0.80711,-0.38126,123.29
    55513 
    55514 > ~clip
    55515 
    55516 > clip near -8.5302 far 8.0092
    55517 
    55518 > hide #!1.12#!12.1#!14.1 models
    55519 
    55520 > show #!1.12#!4.2#!6.2 models
    55521 
    55522 > show #6.2/a:2550-2558
    55523 
    55524 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
    55525 
    55526 > show #6.2/a:2580-2585,3019
    55527 
    55528 > show #6.2/Y:72-76/v:2-6
    55529 
    55530 > show #1.12/a:1670-1674
    55531 
    55532 > style #6.2/a:2552@CM2 sphere
    55533 
    55534 Changed 1 atom style 
    55535 
    55536 > size #6.2/a:2552@CM2 atomRadius 0.6
    55537 
    55538 Changed 1 atom radii 
    55539 
    55540 > color #6.2/a:2549-2559 cadet blue
    55541 
    55542 > color #6.2/a:2602 #8770B5
    55543 
    55544 > color #6.2/a:2506 green yellow
    55545 
    55546 > color #6.2/a:2580-2585,3019 crimson
    55547 
    55548 > color #1.12 gray
    55549 
    55550 > volume #4.2 level 0.5
    55551 
    55552 > volume zone #4.2 range 2 nearAtoms #6.2/a:2549-2559 | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    55553 
    55554 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly) newMap true modelId 999
    55555 
    55556 Opened d9_J85_cl2 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    55557 shown at step 1, values float32 
    55558 
    55559 > color #999 light sky blue
    55560 
    55561 > volume #999 level 0.25
    55562 
    55563 > show #!4.2 models
    55564 
    55565 > windowsize 400 300
    55566 
    55567 > windowsize 600 450
    55568 
    55569 > windowsize 800 450
    55570 
    55571 > windowsize 800 600
    55572 
    55573 > view matrix camera
    55574 > -0.82811,0.53756,-0.1589,129.71,0.3332,0.24409,-0.91072,115.62,-0.45078,-0.80711,-0.38126,123.29
    55575 
    55576 > ~clip
    55577 
    55578 > clip near -8.5302 far 8.0092
    55579 
    55580 > close #999
    55581 
    55582 > hide #!1.12#!4.2#!6.2 models
    55583 
    55584 > show #!1.12#!12.1#!14.1 models
    55585 
    55586 > show #14.1/a:2550-2558
    55587 
    55588 > show #14.1/a:2602&sidechain | #14.1/a:2602@C5',O3'
    55589 
    55590 > show #14.1/a:2506&sidechain
    55591 
    55592 > show #14.1/a:2580-2585,3019
    55593 
    55594 > show #14.1/Y:72-76/v:2-6
    55595 
    55596 > show #1.12/a:1670-1674
    55597 
    55598 > color #14.1/a:2549-2559 cadet blue
    55599 
    55600 > color #14.1/a:2602 #8770B5
    55601 
    55602 > color #14.1/a:2506 green yellow
    55603 
    55604 > color #14.1/a:2580-2585,3019 crimson
    55605 
    55606 > color #1.12 gray
    55607 
    55608 > volume #12.1 level 0.5
    55609 
    55610 > volume zone #12.1 range 2 nearAtoms #14.1/v:2-5 | #14.1/Y:72-76 | #14.1/a:2549-2559 | (#14.1/a:2602,2506&sideonly) | #14.1/a:2580-2585 | #14.1/a:3019 | #1.12/a:1672
    55611 
    55612 > hide #14.*
    55613 
    55614 > show #!1.12#!12.1#!14.1 models
    55615 
    55616 > show #14.1/a:2550-2558
    55617 
    55618 > show #14.1/a:2602&sidechain | #14.1/a:2602@C5',O3'
    55619 
    55620 > show #14.1/a:2506&sidechain
    55621 
    55622 > show #14.1/a:2580-2585,3019
    55623 
    55624 > show #14.1/Y:72-76/v:2-6
    55625 
    55626 > show #1.12/a:1670-1674
    55627 
    55628 > color #14.1/a:2549-2559 cadet blue
    55629 
    55630 > color #14.1/a:2602 #8770B5
    55631 
    55632 > color #14.1/a:2506 green yellow
    55633 
    55634 > color #14.1/a:2580-2585,3019 crimson
    55635 
    55636 > color #1.12 gray
    55637 
    55638 > volume #12.1 level 0.5
    55639 
    55640 > volume zone #12.1 range 2 nearAtoms #14.1/v:2-5 | #14.1/Y:72-76 | #14.1/a:2549-2559 | (#14.1/a:2602,2506&sideonly) | #14.1/a:2580-2585 | #14.1/a:3019 | #1.12/a:1672
    55641 
    55642 > view matrix camera
    55643 > -0.82811,0.53756,-0.1589,129.71,0.3332,0.24409,-0.91072,115.62,-0.45078,-0.80711,-0.38126,123.29
    55644 
    55645 > ~clip
    55646 
    55647 > clip near -8.5302 far 8.0092
    55648 
    55649 > hide #!1.12#!12.1#!14.1 models
    55650 
    55651 > show #!1.12#!4.2#!6.2 models
    55652 
    55653 > show #6.2/a:2550-2558
    55654 
    55655 > show #6.2/a:2602&sidechain | #6.2/a:2602@C5',O3'
    55656 
    55657 > show #6.2/a:2580-2585,3019
    55658 
    55659 > show #6.2/Y:72-76/v:2-6
    55660 
    55661 > show #1.12/a:1670-1674
    55662 
    55663 > style #6.2/a:2552@CM2 sphere
    55664 
    55665 Changed 1 atom style 
    55666 
    55667 > size #6.2/a:2552@CM2 atomRadius 0.6
    55668 
    55669 Changed 1 atom radii 
    55670 
    55671 > color #6.2/a:2549-2559 cadet blue
    55672 
    55673 > color #6.2/a:2602 #8770B5
    55674 
    55675 > color #6.2/a:2506 green yellow
    55676 
    55677 > color #6.2/a:2580-2585,3019 crimson
    55678 
    55679 > color #1.12 gray
    55680 
    55681 > volume #4.2 level 0.5
    55682 
    55683 > volume zone #4.2 range 2 nearAtoms #6.2/a:2549-2559 | #6.2/a:2580-2585 | #6.2/a:3019 | #1.12/a:1672
    55684 
    55685 > volume zone #4.2 range 2 nearAtoms #6.2/v:2-5 | #6.2/Y:72-76 | (#6.2/a:2602&sideonly) newMap true modelId 999
    55686 
    55687 Opened d9_J85_cl2 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    55688 shown at step 1, values float32 
    55689 
    55690 > color #999 light sky blue
    55691 
    55692 > volume #999 level 0.25
    55693 
    55694 > show #!4.2 models
    55695 
    55696 > view matrix camera
    55697 > -0.82811,0.53756,-0.1589,129.71,0.3332,0.24409,-0.91072,115.62,-0.45078,-0.80711,-0.38126,123.29
    55698 
    55699 > ~clip
    55700 
    55701 > clip near -8.5302 far 8.0092
    55702 
    55703 > size #6.2/a:2552@CM2 atomRadius 0.9
    55704 
    55705 Changed 1 atom radii 
    55706 
    55707 > size #6.2/a:2552@CM2 atomRadius 0.8
    55708 
    55709 Changed 1 atom radii 
    55710 
    55711 > close #999
    55712 
    55713 > hide #!1.12#!4.2#!6.2 models
    55714 
    55715 > show #!1.12#!12.1#!14.1 models
    55716 
    55717 > show #14.1/a:2550-2558
    55718 
    55719 > show #14.1/a:2602&sidechain | #14.1/a:2602@C5',O3'
    55720 
    55721 > show #14.1/a:2506&sidechain
    55722 
    55723 > show #14.1/a:2580-2585,3019
    55724 
    55725 > show #14.1/Y:72-76/v:2-6
    55726 
    55727 > show #1.12/a:1670-1674
    55728 
    55729 > color #14.1/a:2549-2559 cadet blue
    55730 
    55731 > color #14.1/a:2602 #8770B5
    55732 
    55733 > color #14.1/a:2506 green yellow
    55734 
    55735 > color #14.1/a:2580-2585,3019 crimson
    55736 
    55737 > color #1.12 gray
    55738 
    55739 > volume #12.1 level 0.5
    55740 
    55741 > volume zone #12.1 range 2 nearAtoms #14.1/v:2-5 | #14.1/Y:72-76 | #14.1/a:2549-2559 | (#14.1/a:2602,2506&sideonly) | #14.1/a:2580-2585 | #14.1/a:3019 | #1.12/a:1672
    55742 
    55743 > clip list
    55744 
    55745 Using 2 clip planes: 
    55746 near offset -12.809, axis 0.159,0.911,0.381, point 140.9,164.2,141.5) 
    55747 far offset 3.7309, axis -0.159,-0.911,-0.381, point 143.5,179.3,147.8) 
    55748 
    55749 > clip list
    55750 
    55751 Using 2 clip planes: 
    55752 near offset -15.724, axis 0.159,0.911,0.381, point 140.4,161.6,140.4) 
    55753 far offset 3.7309, axis -0.159,-0.911,-0.381, point 143.5,179.3,147.8) 
    55754 
    55755 > ~clip
    55756 
    55757 > clip near -12.809 far 3.7309
    55758 
    55759 > clip list
    55760 
    55761 Using 2 clip planes: 
    55762 near offset -15.225, axis 0.159,0.911,0.381, point 144.3,160.6,142.4) 
    55763 far offset 5.1725, axis -0.159,-0.911,-0.381, point 147.6,179.2,150.2) 
    55764 
    55765 > ~clip
    55766 
    55767 > clip near -15.724 far 5.1725
    55768 
    55769 > volume #12.1 level 0.4
    55770 
    55771 > volume #12.1 level 0.3
    55772 
    55773 > view matrix camera
    55774 > -0.82811,0.53756,-0.1589,129.71,0.3332,0.24409,-0.91072,115.62,-0.45078,-0.80711,-0.38126,123.29
    55775 
    55776 > ~clip
    55777 
    55778 > clip near -8.5302 far 8.0092
    55779 
    55780 > ~clip
    55781 
    55782 > clip near -12.809 far 3.7309
    55783 
    55784 > ~clip
    55785 
    55786 > clip near -15.724 far 5.1725
    55787 
    55788 > volume #12.1 level 0.3
    55789 
    55790 > volume #12.1 level 0.5
    55791 
    55792 > volume zone #12.1 range 2 nearAtoms #14.1/a:2553 newMap true modelId 999
    55793 
    55794 Opened d10_J54_c1 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    55795 shown at step 1, values float32 
    55796 
    55797 > color #999 light sky blue
    55798 
    55799 > volume #999 level 0.30
    55800 
    55801 > show #!12.1 models
    55802 
    55803 > color #999 light sky blue
    55804 
    55805 > volume #999 level 0.35
    55806 
    55807 > show #!12.1 models
    55808 
    55809 > close #999
    55810 
    55811 > view matrix camera
    55812 > -0.82811,0.53756,-0.1589,129.71,0.3332,0.24409,-0.91072,115.62,-0.45078,-0.80711,-0.38126,123.29
    55813 
    55814 > ~clip
    55815 
    55816 > clip near -15.724 far 5.1725
    55817 
    55818 > show #!1.12#!12.1#!14.1 models
    55819 
    55820 > show #14.1/a:2550-2558
    55821 
    55822 > show #14.1/a:2602&sidechain | #14.1/a:2602@C5',O3'
    55823 
    55824 > show #14.1/a:2506&sidechain
    55825 
    55826 > show #14.1/a:2580-2585,3019
    55827 
    55828 > show #14.1/Y:72-76/v:2-6
    55829 
    55830 > show #1.12/a:1670-1674
    55831 
    55832 > color #14.1/a:2549-2559 cadet blue
    55833 
    55834 > color #14.1/a:2602 #8770B5
    55835 
    55836 > color #14.1/a:2506 green yellow
    55837 
    55838 > color #14.1/a:2580-2585,3019 crimson
    55839 
    55840 > color #1.12 gray
    55841 
    55842 > volume #12.1 level 0.5
    55843 
    55844 > volume zone #12.1 range 2 nearAtoms #14.1/v:2-5 | #14.1/Y:72-76 | #14.1/a:2549-2559 | (#14.1/a:2602,2506&sideonly) | #14.1/a:2580-2585 | #14.1/a:3019 | #1.12/a:1672
    55845 
    55846 > volume zone #12.1 range 2 nearAtoms #14.1/a:2553&sidechain newMap true
    55847 > modelId 999
    55848 
    55849 Opened d10_J54_c1 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    55850 shown at step 1, values float32 
    55851 
    55852 > color #999 light sky blue
    55853 
    55854 > volume #999 level 0.30
    55855 
    55856 > show #!12.1 models
    55857 
    55858 > close #999
    55859 
    55860 > hide #!1.12#!12.1#!14.1 models
    55861 
    55862 > show #!1.12#!12.2#!14.2 models
    55863 
    55864 > show #14.2/a:2550-2558
    55865 
    55866 > show #14.2/a:2602&sidechain | #14.2/a:2602@C5',O3'
    55867 
    55868 > show #14.2/a:2506&sidechain
    55869 
    55870 > show #14.2/a:2580-2585,3019
    55871 
    55872 > show #14.2/Y:72-76/v:2-6
    55873 
    55874 > show #1.12/a:1670-1674
    55875 
    55876 > color #14.2/a:2549-2559 cadet blue
    55877 
    55878 > color #14.2/a:2602 #8770B5
    55879 
    55880 > color #14.2/a:2506 green yellow
    55881 
    55882 > color #14.2/a:2580-2585,3019 crimson
    55883 
    55884 > color #1.12 gray
    55885 
    55886 > volume #12.2 level 0.5
    55887 
    55888 > volume zone #12.2 range 2 nearAtoms #14.2/v:2-5 | #14.2/Y:72-76 | #14.2/a:2549-2559 | (#14.2/a:2602,2506&sideonly) | #14.2/a:2580-2585 | #14.2/a:3019 | #1.22/a:1672
    55889 
    55890 > volume #12.2 level 0.4
    55891 
    55892 > volume zone #12.2 range 2 nearAtoms #14.2/v:2-5 | #14.2/Y:72-76 | #14.2/a:2549-2559 | (#14.2/a:2602,2506&sidechain) | #14.2/a:2580-2585 | #14.2/a:3019 | #1.22/a:1672
    55893 
    55894 > view matrix camera
    55895 > -0.82811,0.53756,-0.1589,129.71,0.3332,0.24409,-0.91072,115.62,-0.45078,-0.80711,-0.38126,123.29
    55896 
    55897 > ~clip
    55898 
    55899 > clip near -15.724 far 5.1725
    55900 
    55901 > hide #!1.12#!12.2#!14.2 models
    55902 
    55903 > show #!1.12#!4.1#!6.1 models
    55904 
    55905 > show #6.1/a:2550-2558
    55906 
    55907 > show #6.1/a:2602&sidechain | #6.1/a:2602@C5',O3'
    55908 
    55909 > show #6.1/a:2580-2585,3019
    55910 
    55911 > show #6.1/Y:72-76/v:2-6
    55912 
    55913 > show #1.12/a:1670-1674
    55914 
    55915 > style #6.1/a:2552@CM2 sphere
    55916 
    55917 Changed 1 atom style 
    55918 
    55919 > size #6.1/a:2552@CM2 atomRadius 0.6
    55920 
    55921 Changed 1 atom radii 
    55922 
    55923 > color #6.1/a:2549-2559 cadet blue
    55924 
    55925 > color #6.1/a:2602 #8770B5
    55926 
    55927 > color #6.1/a:2506 green yellow
    55928 
    55929 > color #6.1/a:2580-2585,3019 crimson
    55930 
    55931 > color #1.12 gray
    55932 
    55933 > volume #4.1 level 0.5
    55934 
    55935 > volume zone #4.1 range 2 nearAtoms #6.1/v:2-5 | #6.1/Y:72-76 | #6.1/a:2549-2559 | (#6.1/a:2602,2506&sideonly) | #6.1/a:2580-2585 | #6.1/a:3019 | #1.12/a:1672
    55936 
    55937 > view matrix camera
    55938 > -0.82811,0.53756,-0.1589,129.71,0.3332,0.24409,-0.91072,115.62,-0.45078,-0.80711,-0.38126,123.29
    55939 
    55940 > ~clip
    55941 
    55942 > clip near -8.5302 far 8.0092
    55943 
    55944 > view name A-loop-d9
    55945 
    55946 > view A-loop-d9
    55947 
    55948 > hide #!1.12#!4.1#!6.1 models
    55949 
    55950 > show #!1.12#!12.1#!14.1 models
    55951 
    55952 > show #14.1/a:2550-2558
    55953 
    55954 > show #14.1/a:2602&sidechain | #14.1/a:2602@C5',O3'
    55955 
    55956 > show #14.1/a:2506&sidechain
    55957 
    55958 > show #14.1/a:2580-2585,3019
    55959 
    55960 > show #14.1/Y:72-76/v:2-6
    55961 
    55962 > show #1.12/a:1670-1674
    55963 
    55964 > color #14.1/a:2549-2559 cadet blue
    55965 
    55966 > color #14.1/a:2602 #8770B5
    55967 
    55968 > color #14.1/a:2506 green yellow
    55969 
    55970 > color #14.1/a:2580-2585,3019 crimson
    55971 
    55972 > color #1.12 gray
    55973 
    55974 > volume #12.1 level 0.5
    55975 
    55976 > volume zone #12.1 range 2 nearAtoms #14.1/v:2-5 | #14.1/Y:72-76 | #14.1/a:2549-2559 | (#14.1/a:2602,2506&sideonly) | #14.1/a:2580-2585 | #14.1/a:3019 | #1.12/a:1672
    55977 
    55978 > view matrix camera
    55979 > -0.82811,0.53756,-0.1589,129.71,0.3332,0.24409,-0.91072,115.62,-0.45078,-0.80711,-0.38126,123.29
    55980 
    55981 > ~clip
    55982 
    55983 > clip near -15.724 far 5.1725
    55984 
    55985 > view A-loop-d10
    55986 
    55987 Expected an objects specifier or a view name or a keyword 
    55988 
    55989 > view name A-loop-d10
    55990 
    55991 > save /Users/dalar193/wd/deltaRibosomes/figure_A-loop_new.cxs
    55992 
    55993 ——— End of log from Thu Jul 3 21:26:40 2025 ———
    55994 
    55995 opened ChimeraX session 
    55996 
    55997 > hide #!14.1 models
    55998 
    55999 > hide #!12.1 models
    56000 
    56001 > hide #!1.12 models
    56002 
    56003 > view A-loop-d10
    56004 
    56005 > show #!1.12#!12.9#!14.9 models
    56006 
    56007 > show #14.9/a:2550-2558
    56008 
    56009 > show #14.9/a:2602&sidechain | #14.9/a:2602@C5',O3'
    56010 
    56011 > show #14.9/a:2506&sidechain
    56012 
    56013 > show #14.9/a:2580-2585,3019
    56014 
    56015 > show #14.9/Y:72-76/v:2-6
    56016 
    56017 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    56018 
    56019 > color #14.9/a:2549-2559 cadet blue
    56020 
    56021 > color #14.9/a:2602 #0FAB7E
    56022 
    56023 > color #14.9/a:2506 green yellow
    56024 
    56025 > color #14.9/a:2580-2585,3019 crimson
    56026 
    56027 > color #14.9/Y maroon
    56028 
    56029 > color #14.9/v orange
    56030 
    56031 > color #1.12 gray
    56032 
    56033 > volume #12.9 level 0.5
    56034 
    56035 > volume zone #12.9 range 2 nearAtoms #14.9/a:2549-2559 | #14.9/a:2580-2585 | #14.9/a:3019 | #1.12/a:1672
    56036 
    56037 > volume zone #12.9 range 3.5 nearAtoms #14.9/v:2-5 | #14.9/Y:72-76 | (#14.9/a:2602,2506&sidechain) newMap true modelId 999
    56038 
    56039 Opened d10_J62_c9 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    56040 shown at step 1, values float32 
    56041 
    56042 > color #999 light sky blue
    56043 
    56044 > volume #999 level 0.25
    56045 
    56046 > show #!12.9 models
    56047 
    56048 > show #14.9/W:36
    56049 
    56050 > close #25.9
    56051 
    56052 > open
    56053 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J62-coot-5.pdb
    56054 > id 14.9 name d10_J62_c9
    56055 
    56056 Summary of feedback from opening
    56057 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J62-coot-5.pdb 
    56058 --- 
    56059 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    56060 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    56061 6 
    56062 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    56063 8 
    56064 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    56065 23 
    56066 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    56067 13 
    56068 320 messages similar to the above omitted 
    56069 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    56070 -1 N LEU l 102 O LEU l 33 
    56071 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    56072 0 
    56073 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    56074 -1 N LYS l 133 O SER l 30 
    56075 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    56076 0 
    56077 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    56078 115 -1 N ILE m 113 O ILE m 34 
    56079 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    56080 103 -1 N CYS m 100 O MET m 110 
    56081 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    56082 0 
    56083 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    56084 -1 N VAL n 39 O VAL n 49 
    56085 55 messages similar to the above omitted 
    56086 Cannot find LINK/SSBOND residue ZN (101 ) 
    56087 Cannot find LINK/SSBOND residue ZN (101 ) 
    56088 Cannot find LINK/SSBOND residue ZN (101 ) 
    56089 Cannot find LINK/SSBOND residue ZN (101 ) 
    56090  
    56091 Chain information for d10_J62_c9 #7 
    56092 --- 
    56093 Chain | Description 
    56094 3 | No description available 
    56095 Y | No description available 
    56096 Z | No description available 
    56097 a | No description available 
    56098 b | No description available 
    56099 c | No description available 
    56100 e | No description available 
    56101 l | No description available 
    56102 v | No description available 
    56103  
    56104 
    56105 > style #!1.12#!14.9#!14.9.3 stick
    56106 
    56107 Changed 157870 atom styles 
    56108 
    56109 > close #14.9
    56110 
    56111 > open
    56112 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J62-coot-5.pdb
    56113 > id 14.9 name d10_J62_c9
    56114 
    56115 Summary of feedback from opening
    56116 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J62-coot-5.pdb 
    56117 --- 
    56118 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    56119 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    56120 6 
    56121 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    56122 8 
    56123 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    56124 23 
    56125 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    56126 13 
    56127 320 messages similar to the above omitted 
    56128 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    56129 -1 N LEU l 102 O LEU l 33 
    56130 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    56131 0 
    56132 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    56133 -1 N LYS l 133 O SER l 30 
    56134 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    56135 0 
    56136 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    56137 115 -1 N ILE m 113 O ILE m 34 
    56138 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    56139 103 -1 N CYS m 100 O MET m 110 
    56140 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    56141 0 
    56142 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    56143 -1 N VAL n 39 O VAL n 49 
    56144 55 messages similar to the above omitted 
    56145 Cannot find LINK/SSBOND residue ZN (101 ) 
    56146 Cannot find LINK/SSBOND residue ZN (101 ) 
    56147 Cannot find LINK/SSBOND residue ZN (101 ) 
    56148 Cannot find LINK/SSBOND residue ZN (101 ) 
    56149  
    56150 Chain information for d10_J62_c9 #7 
    56151 --- 
    56152 Chain | Description 
    56153 3 | No description available 
    56154 Y | No description available 
    56155 Z | No description available 
    56156 a | No description available 
    56157 b | No description available 
    56158 c | No description available 
    56159 e | No description available 
    56160 l | No description available 
    56161 v | No description available 
    56162  
    56163 
    56164 > style #!1.12#!14.9 stick
    56165 
    56166 Changed 147574 atom styles 
    56167 
    56168 > style #!1.12#!14.9 stick
    56169 
    56170 Changed 147574 atom styles 
    56171 
    56172 > open /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    56173 > PTC/dEc9-J248-coot-3-self-restr.pdb id 25.9 name dE_J248_c9
    56174 
    56175 Summary of feedback from opening
    56176 /Users/dalar193/wd/deltaRibosomes/modelling/deltaE/CS-
    56177 PTC/dEc9-J248-coot-3-self-restr.pdb 
    56178 --- 
    56179 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    56180 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    56181 6 
    56182 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    56183 8 
    56184 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    56185 23 
    56186 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    56187 13 
    56188 320 messages similar to the above omitted 
    56189 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    56190 -1 N LEU l 102 O LEU l 33 
    56191 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    56192 0 
    56193 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    56194 -1 N LYS l 133 O SER l 30 
    56195 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    56196 0 
    56197 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    56198 115 -1 N ILE m 113 O ILE m 34 
    56199 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    56200 103 -1 N CYS m 100 O MET m 110 
    56201 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    56202 0 
    56203 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    56204 -1 N VAL n 39 O VAL n 49 
    56205 55 messages similar to the above omitted 
    56206 Cannot find LINK/SSBOND residue ZN (101 ) 
    56207 Cannot find LINK/SSBOND residue ZN (101 ) 
    56208 Cannot find LINK/SSBOND residue ZN (101 ) 
    56209 Cannot find LINK/SSBOND residue ZN (101 ) 
    56210  
    56211 Chain information for dE_J248_c9 #7 
    56212 --- 
    56213 Chain | Description 
    56214 3 | No description available 
    56215 Y | No description available 
    56216 Z | No description available 
    56217 a | No description available 
    56218 b | No description available 
    56219 c | No description available 
    56220 e | No description available 
    56221 l | No description available 
    56222 v | No description available 
    56223  
    56224 
    56225 > style #!1.12#!14.9#!25.9 stick
    56226 
    56227 Changed 157967 atom styles 
    56228 
    56229 > hide #!25.9 models
    56230 
    56231 > hide #!12.9 models
    56232 
    56233 > hide #!14.9 models
    56234 
    56235 > close #999
    56236 
    56237 > hide #!1.12 models
    56238 
    56239 > hide #14.9
    56240 
    56241 > hide #25.9
    56242 
    56243 > view A-loop-d10
    56244 
    56245 > show #!1.12#!12.9#!14.9 models
    56246 
    56247 > show #14.9/a:2550-2558
    56248 
    56249 > show #14.9/a:2602&sidechain | #14.9/a:2602@C5',O3'
    56250 
    56251 > show #14.9/a:2506&sidechain
    56252 
    56253 > show #14.9/a:2580-2585,3019
    56254 
    56255 > show #14.9/Y:72-76/v:2-6
    56256 
    56257 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    56258 
    56259 > color #14.9/a:2549-2559 cadet blue
    56260 
    56261 > color #14.9/a:2602 #0FAB7E
    56262 
    56263 > color #14.9/a:2506 green yellow
    56264 
    56265 > color #14.9/a:2580-2585,3019 crimson
    56266 
    56267 > color #14.9/Y maroon
    56268 
    56269 > color #14.9/v orange
    56270 
    56271 > color #1.12 gray
    56272 
    56273 > volume #12.9 level 0.5
    56274 
    56275 > volume zone #12.9 range 2 nearAtoms #14.9/a:2549-2559 | #14.9/a:2580-2585 | #14.9/a:3019 | #1.12/a:1672
    56276 
    56277 > volume zone #12.9 range 3.5 nearAtoms #14.9/v:2-5 | #14.9/Y:72-76 | (#14.9/a:2602,2506&sidechain) newMap true modelId 999
    56278 
    56279 Opened d10_J62_c9 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    56280 shown at step 1, values float32 
    56281 
    56282 > color #999 light sky blue
    56283 
    56284 > volume #999 level 0.25
    56285 
    56286 > show #!12.9 models
    56287 
    56288 > show #14.9/W:36
    56289 
    56290 > volume zone #12.9 range 2 nearAtoms #14.9/a:2549-2559 | #14.9/a:2580-2585 | #14.9/a:3019 | #1.12/a:1672 | #14.9/W:36
    56291 
    56292 > color #14.9/W cadet blue
    56293 
    56294 > close #14.1-10
    56295 
    56296 > open
    56297 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J53-coot-6-A-loop.pdb
    56298 > id 14.10 name d10_J53_c0
    56299 
    56300 Summary of feedback from opening
    56301 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J53-coot-6-A-loop.pdb 
    56302 --- 
    56303 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    56304 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    56305 6 
    56306 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    56307 8 
    56308 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    56309 23 
    56310 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    56311 13 
    56312 320 messages similar to the above omitted 
    56313 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    56314 -1 N LEU l 102 O LEU l 33 
    56315 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    56316 0 
    56317 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    56318 -1 N LYS l 133 O SER l 30 
    56319 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    56320 0 
    56321 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    56322 115 -1 N ILE m 113 O ILE m 34 
    56323 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    56324 103 -1 N CYS m 100 O MET m 110 
    56325 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    56326 0 
    56327 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    56328 -1 N VAL n 39 O VAL n 49 
    56329 55 messages similar to the above omitted 
    56330 Cannot find LINK/SSBOND residue ZN (101 ) 
    56331 Cannot find LINK/SSBOND residue ZN (101 ) 
    56332 Cannot find LINK/SSBOND residue ZN (101 ) 
    56333 Cannot find LINK/SSBOND residue ZN (101 ) 
    56334  
    56335 Chain information for d10_J53_c0 #7 
    56336 --- 
    56337 Chain | Description 
    56338 3 | No description available 
    56339 a | No description available 
    56340 b | No description available 
    56341 c | No description available 
    56342 e | No description available 
    56343 l | No description available 
    56344  
    56345 
    56346 > open
    56347 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J54-coot-6-A-loop.pdb
    56348 > id 14.1 name d10_J54_c1
    56349 
    56350 Summary of feedback from opening
    56351 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J54-coot-6-A-loop.pdb 
    56352 --- 
    56353 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    56354 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    56355 6 
    56356 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    56357 8 
    56358 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    56359 23 
    56360 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    56361 13 
    56362 320 messages similar to the above omitted 
    56363 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    56364 -1 N LEU l 102 O LEU l 33 
    56365 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    56366 0 
    56367 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    56368 -1 N LYS l 133 O SER l 30 
    56369 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    56370 0 
    56371 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    56372 115 -1 N ILE m 113 O ILE m 34 
    56373 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    56374 103 -1 N CYS m 100 O MET m 110 
    56375 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    56376 0 
    56377 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    56378 -1 N VAL n 39 O VAL n 49 
    56379 55 messages similar to the above omitted 
    56380 Cannot find LINK/SSBOND residue ZN (101 ) 
    56381 Cannot find LINK/SSBOND residue ZN (101 ) 
    56382 Cannot find LINK/SSBOND residue ZN (101 ) 
    56383 Cannot find LINK/SSBOND residue ZN (101 ) 
    56384  
    56385 Chain information for d10_J54_c1 #7 
    56386 --- 
    56387 Chain | Description 
    56388 3 | No description available 
    56389 a | No description available 
    56390 b | No description available 
    56391 c | No description available 
    56392 e | No description available 
    56393 l | No description available 
    56394  
    56395 
    56396 > open
    56397 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J55-coot-6-A-loop.pdb
    56398 > id 14.2 name d10_J55_c2
    56399 
    56400 Summary of feedback from opening
    56401 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J55-coot-6-A-loop.pdb 
    56402 --- 
    56403 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    56404 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    56405 6 
    56406 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    56407 8 
    56408 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    56409 23 
    56410 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    56411 13 
    56412 320 messages similar to the above omitted 
    56413 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    56414 -1 N LEU l 102 O LEU l 33 
    56415 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    56416 0 
    56417 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    56418 -1 N LYS l 133 O SER l 30 
    56419 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    56420 0 
    56421 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    56422 115 -1 N ILE m 113 O ILE m 34 
    56423 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    56424 103 -1 N CYS m 100 O MET m 110 
    56425 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    56426 0 
    56427 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    56428 -1 N VAL n 39 O VAL n 49 
    56429 55 messages similar to the above omitted 
    56430 Cannot find LINK/SSBOND residue ZN (101 ) 
    56431 Cannot find LINK/SSBOND residue ZN (101 ) 
    56432 Cannot find LINK/SSBOND residue ZN (101 ) 
    56433 Cannot find LINK/SSBOND residue ZN (101 ) 
    56434  
    56435 Chain information for d10_J55_c2 #7 
    56436 --- 
    56437 Chain | Description 
    56438 3 | No description available 
    56439 a | No description available 
    56440 b | No description available 
    56441 c | No description available 
    56442 e | No description available 
    56443 l | No description available 
    56444 v | No description available 
    56445  
    56446 
    56447 > open
    56448 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J56-coot-6-A-loop.pdb
    56449 > id 14.3 name d10_J56_c3
    56450 
    56451 Summary of feedback from opening
    56452 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J56-coot-6-A-loop.pdb 
    56453 --- 
    56454 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    56455 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    56456 6 
    56457 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    56458 8 
    56459 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    56460 23 
    56461 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    56462 13 
    56463 320 messages similar to the above omitted 
    56464 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    56465 -1 N LEU l 102 O LEU l 33 
    56466 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    56467 0 
    56468 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    56469 -1 N LYS l 133 O SER l 30 
    56470 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    56471 0 
    56472 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    56473 115 -1 N ILE m 113 O ILE m 34 
    56474 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    56475 103 -1 N CYS m 100 O MET m 110 
    56476 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    56477 0 
    56478 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    56479 -1 N VAL n 39 O VAL n 49 
    56480 55 messages similar to the above omitted 
    56481 Cannot find LINK/SSBOND residue ZN (101 ) 
    56482 Cannot find LINK/SSBOND residue ZN (101 ) 
    56483 Cannot find LINK/SSBOND residue ZN (101 ) 
    56484 Cannot find LINK/SSBOND residue ZN (101 ) 
    56485  
    56486 Chain information for d10_J56_c3 #7 
    56487 --- 
    56488 Chain | Description 
    56489 3 | No description available 
    56490 Y | No description available 
    56491 Z | No description available 
    56492 a | No description available 
    56493 b | No description available 
    56494 c | No description available 
    56495 e | No description available 
    56496 l | No description available 
    56497 v | No description available 
    56498  
    56499 
    56500 > open
    56501 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J57-coot-6-A-loop.pdb
    56502 > id 14.4 name d10_J57_c4
    56503 
    56504 Summary of feedback from opening
    56505 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J57-coot-6-A-loop.pdb 
    56506 --- 
    56507 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    56508 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    56509 6 
    56510 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    56511 8 
    56512 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    56513 23 
    56514 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    56515 13 
    56516 320 messages similar to the above omitted 
    56517 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    56518 -1 N LEU l 102 O LEU l 33 
    56519 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    56520 0 
    56521 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    56522 -1 N LYS l 133 O SER l 30 
    56523 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    56524 0 
    56525 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    56526 115 -1 N ILE m 113 O ILE m 34 
    56527 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    56528 103 -1 N CYS m 100 O MET m 110 
    56529 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    56530 0 
    56531 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    56532 -1 N VAL n 39 O VAL n 49 
    56533 55 messages similar to the above omitted 
    56534 Cannot find LINK/SSBOND residue ZN (101 ) 
    56535 Cannot find LINK/SSBOND residue ZN (101 ) 
    56536 Cannot find LINK/SSBOND residue ZN (101 ) 
    56537 Cannot find LINK/SSBOND residue ZN (101 ) 
    56538  
    56539 Chain information for d10_J57_c4 #7 
    56540 --- 
    56541 Chain | Description 
    56542 3 | No description available 
    56543 a | No description available 
    56544 b | No description available 
    56545 c | No description available 
    56546 e | No description available 
    56547 l | No description available 
    56548 v | No description available 
    56549  
    56550 
    56551 > open
    56552 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J58-coot-6-A-loop.pdb
    56553 > id 14.5 name d10_J58_c5
    56554 
    56555 Summary of feedback from opening
    56556 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J58-coot-6-A-loop.pdb 
    56557 --- 
    56558 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    56559 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    56560 6 
    56561 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    56562 8 
    56563 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    56564 23 
    56565 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    56566 13 
    56567 320 messages similar to the above omitted 
    56568 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    56569 -1 N LEU l 102 O LEU l 33 
    56570 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    56571 0 
    56572 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    56573 -1 N LYS l 133 O SER l 30 
    56574 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    56575 0 
    56576 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    56577 115 -1 N ILE m 113 O ILE m 34 
    56578 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    56579 103 -1 N CYS m 100 O MET m 110 
    56580 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    56581 0 
    56582 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    56583 -1 N VAL n 39 O VAL n 49 
    56584 55 messages similar to the above omitted 
    56585 Cannot find LINK/SSBOND residue ZN (101 ) 
    56586 Cannot find LINK/SSBOND residue ZN (101 ) 
    56587 Cannot find LINK/SSBOND residue ZN (101 ) 
    56588 Cannot find LINK/SSBOND residue ZN (101 ) 
    56589  
    56590 Chain information for d10_J58_c5 #7 
    56591 --- 
    56592 Chain | Description 
    56593 3 | No description available 
    56594 Z | No description available 
    56595 a | No description available 
    56596 b | No description available 
    56597 c | No description available 
    56598 e | No description available 
    56599 l | No description available 
    56600 v | No description available 
    56601  
    56602 
    56603 > open
    56604 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J59-coot-6-A-loop.pdb
    56605 > id 14.6 name d10_J59_c6
    56606 
    56607 Summary of feedback from opening
    56608 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J59-coot-6-A-loop.pdb 
    56609 --- 
    56610 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    56611 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    56612 6 
    56613 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    56614 8 
    56615 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    56616 23 
    56617 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    56618 13 
    56619 320 messages similar to the above omitted 
    56620 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    56621 -1 N LEU l 102 O LEU l 33 
    56622 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    56623 0 
    56624 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    56625 -1 N LYS l 133 O SER l 30 
    56626 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    56627 0 
    56628 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    56629 115 -1 N ILE m 113 O ILE m 34 
    56630 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    56631 103 -1 N CYS m 100 O MET m 110 
    56632 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    56633 0 
    56634 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    56635 -1 N VAL n 39 O VAL n 49 
    56636 55 messages similar to the above omitted 
    56637 Cannot find LINK/SSBOND residue ZN (101 ) 
    56638 Cannot find LINK/SSBOND residue ZN (101 ) 
    56639 Cannot find LINK/SSBOND residue ZN (101 ) 
    56640 Cannot find LINK/SSBOND residue ZN (101 ) 
    56641  
    56642 Chain information for d10_J59_c6 #7 
    56643 --- 
    56644 Chain | Description 
    56645 3 | No description available 
    56646 Z | No description available 
    56647 a | No description available 
    56648 b | No description available 
    56649 c | No description available 
    56650 e | No description available 
    56651 l | No description available 
    56652 v | No description available 
    56653  
    56654 
    56655 > open
    56656 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J60-coot-6-A-loop.pdb
    56657 > id 14.7 name d10_J60_c7
    56658 
    56659 Summary of feedback from opening
    56660 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J60-coot-6-A-loop.pdb 
    56661 --- 
    56662 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    56663 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    56664 6 
    56665 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    56666 8 
    56667 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    56668 23 
    56669 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    56670 13 
    56671 320 messages similar to the above omitted 
    56672 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    56673 -1 N LEU l 102 O LEU l 33 
    56674 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    56675 0 
    56676 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    56677 -1 N LYS l 133 O SER l 30 
    56678 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    56679 0 
    56680 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    56681 115 -1 N ILE m 113 O ILE m 34 
    56682 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    56683 103 -1 N CYS m 100 O MET m 110 
    56684 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    56685 0 
    56686 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    56687 -1 N VAL n 39 O VAL n 49 
    56688 55 messages similar to the above omitted 
    56689 Cannot find LINK/SSBOND residue ZN (101 ) 
    56690 Cannot find LINK/SSBOND residue ZN (101 ) 
    56691 Cannot find LINK/SSBOND residue ZN (101 ) 
    56692 Cannot find LINK/SSBOND residue ZN (101 ) 
    56693  
    56694 Chain information for d10_J60_c7 #7 
    56695 --- 
    56696 Chain | Description 
    56697 3 | No description available 
    56698 Z | No description available 
    56699 a | No description available 
    56700 b | No description available 
    56701 c | No description available 
    56702 e | No description available 
    56703 l | No description available 
    56704  
    56705 
    56706 > open
    56707 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J61-coot-6-A-loop.pdb
    56708 > id 14.8 name d10_J61_c8
    56709 
    56710 Summary of feedback from opening
    56711 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J61-coot-6-A-loop.pdb 
    56712 --- 
    56713 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    56714 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    56715 6 
    56716 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    56717 8 
    56718 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    56719 23 
    56720 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    56721 13 
    56722 320 messages similar to the above omitted 
    56723 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    56724 -1 N LEU l 102 O LEU l 33 
    56725 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    56726 0 
    56727 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    56728 -1 N LYS l 133 O SER l 30 
    56729 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    56730 0 
    56731 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    56732 115 -1 N ILE m 113 O ILE m 34 
    56733 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    56734 103 -1 N CYS m 100 O MET m 110 
    56735 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    56736 0 
    56737 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    56738 -1 N VAL n 39 O VAL n 49 
    56739 55 messages similar to the above omitted 
    56740 Cannot find LINK/SSBOND residue ZN (101 ) 
    56741 Cannot find LINK/SSBOND residue ZN (101 ) 
    56742 Cannot find LINK/SSBOND residue ZN (101 ) 
    56743 Cannot find LINK/SSBOND residue ZN (101 ) 
    56744  
    56745 Chain information for d10_J61_c8 #7 
    56746 --- 
    56747 Chain | Description 
    56748 3 | No description available 
    56749 Z | No description available 
    56750 a | No description available 
    56751 b | No description available 
    56752 c | No description available 
    56753 e | No description available 
    56754 l | No description available 
    56755 v | No description available 
    56756  
    56757 
    56758 > open
    56759 > /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J62-coot-6-A-loop.pdb
    56760 > id 14.9 name d10_J62_c9
    56761 
    56762 Summary of feedback from opening
    56763 /Users/dalar193/wd/deltaRibosomes/modelling/delta10/CS-J53-J62/d10J62-coot-6-A-loop.pdb 
    56764 --- 
    56765 warnings | Start residue of secondary structure not found: HELIX 1 1 SER B 5 GLY B 13 1 9 
    56766 Start residue of secondary structure not found: HELIX 2 2 GLN B 19 ASN B 24 1
    56767 6 
    56768 Start residue of secondary structure not found: HELIX 3 3 PRO B 25 PHE B 32 1
    56769 8 
    56770 Start residue of secondary structure not found: HELIX 4 4 ASN B 42 LYS B 64 1
    56771 23 
    56772 Start residue of secondary structure not found: HELIX 5 5 ALA B 76 ASP B 88 1
    56773 13 
    56774 320 messages similar to the above omitted 
    56775 End residue of secondary structure not found: SHEET 4 50 4 GLY l 99 LEU l 102
    56776 -1 N LEU l 102 O LEU l 33 
    56777 Start residue of secondary structure not found: SHEET 1 51 2 SER l 30 VAL l 36
    56778 0 
    56779 End residue of secondary structure not found: SHEET 2 51 2 LYS l 127 LYS l 133
    56780 -1 N LYS l 133 O SER l 30 
    56781 Start residue of secondary structure not found: SHEET 1 52 3 ILE m 33 THR m 37
    56782 0 
    56783 Start residue of secondary structure not found: SHEET 2 52 3 ASN m 107 LEU m
    56784 115 -1 N ILE m 113 O ILE m 34 
    56785 Start residue of secondary structure not found: SHEET 3 52 3 THR m 95 ARG m
    56786 103 -1 N CYS m 100 O MET m 110 
    56787 Start residue of secondary structure not found: SHEET 1 53 4 VAL n 49 THR n 53
    56788 0 
    56789 Start residue of secondary structure not found: SHEET 2 53 4 ILE n 35 ALA n 41
    56790 -1 N VAL n 39 O VAL n 49 
    56791 55 messages similar to the above omitted 
    56792 Cannot find LINK/SSBOND residue ZN (101 ) 
    56793 Cannot find LINK/SSBOND residue ZN (101 ) 
    56794 Cannot find LINK/SSBOND residue ZN (101 ) 
    56795 Cannot find LINK/SSBOND residue ZN (101 ) 
    56796  
    56797 Chain information for d10_J62_c9 #7 
    56798 --- 
    56799 Chain | Description 
    56800 3 | No description available 
    56801 Y | No description available 
    56802 Z | No description available 
    56803 a | No description available 
    56804 b | No description available 
    56805 c | No description available 
    56806 e | No description available 
    56807 l | No description available 
    56808 v | No description available 
    56809  
    56810 
    56811 > rename #14 d10-PTC-models
    56812 
    56813 > style #!1.12#!14.1-10 stick
    56814 
    56815 Changed 235637 atom styles 
    56816 
    56817 > style #!1.12#!14.1-10 stick
    56818 
    56819 Changed 235637 atom styles 
    56820 
    56821 > style #!1.12#!14.1-10 stick
    56822 
    56823 Changed 235637 atom styles 
    56824 
    56825 > style #!1.12#!14.1-10 stick
    56826 
    56827 Changed 235637 atom styles 
    56828 
    56829 > style #!1.12#!14.1-10 stick
    56830 
    56831 Changed 235637 atom styles 
    56832 
    56833 > style #!1.12#!14.1-10 stick
    56834 
    56835 Changed 235637 atom styles 
    56836 
    56837 > style #!1.12#!14.1-10 stick
    56838 
    56839 Changed 235637 atom styles 
    56840 
    56841 > hide #!14.10 models
    56842 
    56843 > hide #!14.9 models
    56844 
    56845 > hide #!14.8 models
    56846 
    56847 > hide #!14.7 models
    56848 
    56849 > hide #!14.6 models
    56850 
    56851 > hide #!14.5 models
    56852 
    56853 > hide #!14.4 models
    56854 
    56855 > hide #!14.3 models
    56856 
    56857 > hide #!14.2 models
    56858 
    56859 > hide #!14.1 models
    56860 
    56861 > hide #!12.9 models
    56862 
    56863 > close #999
    56864 
    56865 > hide #!1.12 models
    56866 
    56867 > view A-loop-d10
    56868 
    56869 > show #!1.12#!12.1#!14.1 models
    56870 
    56871 > hide #14.1
    56872 
    56873 > show #14.1/a:2550-2558
    56874 
    56875 > show #14.1/a:2602&sidechain | #14.1/a:2602@C5',O3'
    56876 
    56877 > show #14.1/a:2506&sidechain
    56878 
    56879 > show #14.1/a:2580-2585,3019
    56880 
    56881 > show #14.1/Y:72-76/v:2-6
    56882 
    56883 > show #!14.2 models
    56884 
    56885 > hide #14.2
    56886 
    56887 > show #14.2/a:2553-2554:2552@O3
    56888 
    56889 > color #14.2/a:2552-2553 cadet blue
    56890 
    56891 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    56892 
    56893 > color #14.1/a:2549-2559 cadet blue
    56894 
    56895 > hide #14.1/a:2554
    56896 
    56897 > show #14.1/a:2554@O3'
    56898 
    56899 > hide #14.1/a:2553
    56900 
    56901 > show #14.1/a:2553 & sidechain
    56902 
    56903 > color #14.1/a:2553 turquoise
    56904 
    56905 > color #14.1/a:2602 #0FAB7E
    56906 
    56907 > color #14.1/a:2506 green yellow
    56908 
    56909 > color #14.1/a:2580-2585,3019 crimson
    56910 
    56911 > color #14.1/Y maroon
    56912 
    56913 > color #14.1/v orange
    56914 
    56915 > color #1.12 gray
    56916 
    56917 > volume #12.1 level 0.5
    56918 
    56919 > volume zone #12.1 range 2 nearAtoms #14.1/v:2-5 | #14.1/Y:72-76 | #14.1/a:2549-2559 | (#14.1/a:2602,2506&sideonly) | #14.1/a:2580-2585 | #14.1/a:3019 | #1.12/a:1672 | #14.2/a:2553-2554
    56920 
    56921 > volume zone #12.1 range 2 nearAtoms #14.1/a:2553&sidechain newMap true
    56922 > modelId 999
    56923 
    56924 Opened d10_J54_c1 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    56925 shown at step 1, values float32 
    56926 
    56927 > color #999 light sky blue
    56928 
    56929 > volume #999 level 0.30
    56930 
    56931 > show #!12.1 models
    56932 
    56933 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.1.png width 800
    56934 > height 600 supersample 4
    56935 
    56936 > close #999
    56937 
    56938 > hide #!14.2 models
    56939 
    56940 > hide #!1.12#!12.1#!14.1 models
    56941 
    56942 > view A-loop-d10
    56943 
    56944 > show #!1.12#!12.2#!14.2 models
    56945 
    56946 > hide #14.2
    56947 
    56948 > show #14.2/a:2550-2558
    56949 
    56950 > show #14.2/a:2602&sidechain | #14.2/a:2602@C5',O3'
    56951 
    56952 > show #14.2/a:2506&sidechain
    56953 
    56954 > show #14.2/a:2580-2585,3019
    56955 
    56956 > show #14.2/Y:72-76/v:2-6
    56957 
    56958 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    56959 
    56960 > color #14.2/a:2549-2559 cadet blue
    56961 
    56962 > color #14.2/a:2602 #0FAB7E
    56963 
    56964 > color #14.2/a:2506 green yellow
    56965 
    56966 > color #14.2/a:2580-2585,3019 crimson
    56967 
    56968 > color #14.2/Y maroon
    56969 
    56970 > color #14.2/v orange
    56971 
    56972 > color #1.12 gray
    56973 
    56974 > volume #12.2 level 0.5
    56975 
    56976 > volume zone #12.2 range 2 nearAtoms #14.2/v:2-5 | #14.2/Y:72-76 | #14.2/a:2549-2559 | (#14.2/a:2602,2506&sidechain) | #14.2/a:2580-2585 | #14.2/a:3019 | #1.12/a:1672
    56977 
    56978 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.2.png width 800
    56979 > height 600 supersample 4
    56980 
    56981 > hide #!1.12#!12.2#!14.2 models
    56982 
    56983 > view A-loop-d10
    56984 
    56985 > show #!1.12#!12.3#!14.3 models
    56986 
    56987 > hide #14.3
    56988 
    56989 > show #14.3/a:2550-2558
    56990 
    56991 > show #14.3/a:2602&sidechain | #14.3/a:2602@C5',O3'
    56992 
    56993 > show #14.3/a:2506&sidechain
    56994 
    56995 > show #14.3/a:2580-2585,3019
    56996 
    56997 > show #14.3/Y:72-76/v:2-6
    56998 
    56999 > show #!14.2 models
    57000 
    57001 > hide #14.2
    57002 
    57003 > show #14.2/a:2553-2554 & sidechain
    57004 
    57005 > color #14.2/a:2553-2554 turquoise
    57006 
    57007 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57008 
    57009 > color #14.3/a:2549-2559 cadet blue
    57010 
    57011 > color #14.3/a:2602 #0FAB7E
    57012 
    57013 > color #14.3/a:2506 green yellow
    57014 
    57015 > color #14.3/a:2580-2585,3019 crimson
    57016 
    57017 > color #14.3/Y maroon
    57018 
    57019 > color #14.3/v orange
    57020 
    57021 > color #1.12 gray
    57022 
    57023 > volume #12.3 level 0.5
    57024 
    57025 > volume zone #12.3 range 2 nearAtoms #14.3/a:2549-2559 | #14.3/a:2580-2585 | #14.3/a:3019 | #1.12/a:1672 | #14.2/a:2553-2554
    57026 
    57027 > volume zone #12.3 range 3.5 nearAtoms #14.3/v:2-5 | #14.3/Y:72-76 | (#14.3/a:2602,2506&sidechain) newMap true modelId 999
    57028 
    57029 Opened d10_J56_c3 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    57030 shown at step 1, values float32 
    57031 
    57032 > color #999 light sky blue
    57033 
    57034 > volume #999 level 0.30
    57035 
    57036 > show #!12.3 models
    57037 
    57038 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.3.png width 800
    57039 > height 600 supersample 4
    57040 
    57041 > close #999
    57042 
    57043 > hide #!14.2 models
    57044 
    57045 > hide #!1.12#!12.3#!14.3 models
    57046 
    57047 > view A-loop-d10
    57048 
    57049 > show #!1.12#!12.4#!14.4 models
    57050 
    57051 > hide #14.4
    57052 
    57053 > show #14.4/a:2550-2558
    57054 
    57055 > show #14.4/a:2602&sidechain | #14.4/a:2602@C5',O3'
    57056 
    57057 > show #14.4/a:2506&sidechain
    57058 
    57059 > show #14.4/a:2580-2585,3019
    57060 
    57061 > show #14.4/Y:72-76/v:2-6
    57062 
    57063 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57064 
    57065 > color #14.4/a:2549-2559 cadet blue
    57066 
    57067 > color #14.4/a:2602 #0FAB7E
    57068 
    57069 > color #14.4/a:2506 green yellow
    57070 
    57071 > color #14.4/a:2580-2585,3019 crimson
    57072 
    57073 > color #14.4/Y maroon
    57074 
    57075 > color #14.4/v orange
    57076 
    57077 > color #1.12 gray
    57078 
    57079 > volume #12.4 level 0.5
    57080 
    57081 > volume zone #12.4 range 2 nearAtoms #14.4/v:2-5 | #14.4/Y:72-76 | #14.4/a:2549-2559 | (#14.4/a:2602,2506&sidechain) | #14.4/a:2580-2585 | #14.4/a:3019 | #1.12/a:1672 | #14.3/a:2580-2585
    57082 
    57083 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.4.png width 800
    57084 > height 600 supersample 4
    57085 
    57086 > hide #!1.12#!12.4#!14.4 models
    57087 
    57088 > view A-loop-d10
    57089 
    57090 > show #!1.12#!12.5#!14.5 models
    57091 
    57092 > hide #14.5
    57093 
    57094 > show #14.5/a:2550-2558
    57095 
    57096 > show #14.5/a:2602&sidechain | #14.5/a:2602@C5',O3'
    57097 
    57098 > show #14.5/a:2506&sidechain
    57099 
    57100 > show #14.5/a:2580-2585,3019
    57101 
    57102 > show #14.5/Y:72-76/v:2-6
    57103 
    57104 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57105 
    57106 > color #14.5/a:2549-2559 cadet blue
    57107 
    57108 > color #14.5/a:2602 #0FAB7E
    57109 
    57110 > color #14.5/a:2506 green yellow
    57111 
    57112 > color #14.5/a:2580-2585,3019 crimson
    57113 
    57114 > color #14.5/Y maroon
    57115 
    57116 > color #14.5/v orange
    57117 
    57118 > color #1.12 gray
    57119 
    57120 > volume #12.5 level 0.5
    57121 
    57122 > volume zone #12.5 range 2 nearAtoms #14.5/v:2-5 | #14.5/Y:72-76 | #14.5/a:2549-2559 | (#14.5/a:2602,2506&sidechain) | #14.5/a:2580-2585 | #14.5/a:3019 | #1.12/a:1672 | #14.3/a:2580-2585
    57123 
    57124 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.5.png width 800
    57125 > height 600 supersample 4
    57126 
    57127 > hide #!1.12#!12.5#!14.5 models
    57128 
    57129 > view A-loop-d10
    57130 
    57131 > show #!1.12#!12.6#!14.6 models
    57132 
    57133 > hide #14.6
    57134 
    57135 > show #14.6/a:2550-2558
    57136 
    57137 > show #14.6/a:2602&sidechain | #14.6/a:2602@C5',O3'
    57138 
    57139 > show #14.6/a:2506&sidechain
    57140 
    57141 > show #14.6/a:2580-2585,3019
    57142 
    57143 > show #14.6/Y:72-76/v:2-6
    57144 
    57145 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57146 
    57147 > color #14.6/a:2549-2559 cadet blue
    57148 
    57149 > color #14.6/a:2602 #0FAB7E
    57150 
    57151 > color #14.6/a:2506 green yellow
    57152 
    57153 > color #14.6/a:2580-2585,3019 crimson
    57154 
    57155 > color #14.6/Y maroon
    57156 
    57157 > color #14.6/v orange
    57158 
    57159 > color #1.12 gray
    57160 
    57161 > volume #12.6 level 0.5
    57162 
    57163 > volume zone #12.6 range 2 nearAtoms #14.6/a:2549-2559 | #14.6/a:2580-2585 | #14.6/a:3019 | #1.12/a:1672
    57164 
    57165 > volume zone #12.6 range 3.5 nearAtoms #14.6/v:2-5 | #14.6/Y:72-76 | (#14.6/a:2602,2506&sidechain) newMap true modelId 999
    57166 
    57167 Opened d10_J59_c6 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    57168 shown at step 1, values float32 
    57169 
    57170 > color #999 light sky blue
    57171 
    57172 > volume #999 level 0.4
    57173 
    57174 > show #!12.6 models
    57175 
    57176 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.6.png width 800
    57177 > height 600 supersample 4
    57178 
    57179 > close #999
    57180 
    57181 > hide #!1.12#!12.6#!14.6 models
    57182 
    57183 > view A-loop-d10
    57184 
    57185 > show #!1.12#!12.7#!14.7 models
    57186 
    57187 > hide #14.7
    57188 
    57189 > show #14.7/a:2550-2558
    57190 
    57191 > show #14.7/a:2602&sidechain | #14.7/a:2602@C5',O3'
    57192 
    57193 > show #14.7/a:2506&sidechain
    57194 
    57195 > show #14.7/a:2580-2585,3019
    57196 
    57197 > show #14.7/Y:72-76/v:2-6
    57198 
    57199 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57200 
    57201 > color #14.7/a:2549-2559 cadet blue
    57202 
    57203 > color #14.7/a:2602 #0FAB7E
    57204 
    57205 > color #14.7/a:2506 green yellow
    57206 
    57207 > color #14.7/a:2580-2585,3019 crimson
    57208 
    57209 > color #14.7/Y maroon
    57210 
    57211 > color #14.7/v orange
    57212 
    57213 > color #1.12 gray
    57214 
    57215 > volume #12.7 level 0.5
    57216 
    57217 > volume zone #12.7 range 2 nearAtoms #14.7/a:2549-2559 | #14.7/a:2580-2585 | #14.7/a:3019 | #1.12/a:1672
    57218 
    57219 > volume zone #12.7 range 3.5 nearAtoms #14.7/v:2-5 | #14.7/Y:72-76 | (#14.7/a:2602,2506&sidechain) newMap true modelId 999
    57220 
    57221 Opened d10_J60_c7 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    57222 shown at step 1, values float32 
    57223 
    57224 > color #999 light sky blue
    57225 
    57226 > volume #999 level 0.40
    57227 
    57228 > show #!12.7 models
    57229 
    57230 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.7.png width 800
    57231 > height 600 supersample 4
    57232 
    57233 > close #999
    57234 
    57235 > hide #!1.12#!12.7#!14.7 models
    57236 
    57237 > view A-loop-d10
    57238 
    57239 > show #!1.12#!12.8#!14.8 models
    57240 
    57241 > hide #14.8
    57242 
    57243 > show #14.8/a:2550-2558
    57244 
    57245 > show #14.8/a:2602&sidechain | #14.8/a:2602@C5',O3'
    57246 
    57247 > show #14.8/a:2506&sidechain
    57248 
    57249 > show #14.8/a:2580-2585,3019
    57250 
    57251 > show #14.8/Y:72-76/v:2-6
    57252 
    57253 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57254 
    57255 > color #14.8/a:2549-2559 cadet blue
    57256 
    57257 > color #14.8/a:2602 #0FAB7E
    57258 
    57259 > color #14.8/a:2506 green yellow
    57260 
    57261 > color #14.8/a:2580-2585,3019 crimson
    57262 
    57263 > color #14.8/Y maroon
    57264 
    57265 > color #14.8/v orange
    57266 
    57267 > color #1.12 gray
    57268 
    57269 > volume #12.8 level 0.5
    57270 
    57271 > volume zone #12.8 range 2 nearAtoms #14.8/v:2-5 | #14.8/Y:72-76 | #14.8/a:2549-2559 | (#14.8/a:2602,2506&sidechain) | #14.8/a:2580-2585 | #14.8/a:3019 | #1.12/a:1672 | #14.3/a:2580-2585
    57272 
    57273 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.8.png width 800
    57274 > height 600 supersample 4
    57275 
    57276 > hide #!1.12#!12.8#!14.8 models
    57277 
    57278 > view A-loop-d10
    57279 
    57280 > show #!1.12#!12.9#!14.9 models
    57281 
    57282 > hide #14.9
    57283 
    57284 > show #14.9/a:2550-2558
    57285 
    57286 > show #14.9/a:2602&sidechain | #14.9/a:2602@C5',O3'
    57287 
    57288 > show #14.9/a:2506&sidechain
    57289 
    57290 > show #14.9/a:2580-2585,3019
    57291 
    57292 > show #14.9/Y:72-76/v:2-6
    57293 
    57294 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57295 
    57296 > color #14.9/a:2549-2559 cadet blue
    57297 
    57298 > color #14.9/W cadet blue
    57299 
    57300 > color #14.9/a:2602 #0FAB7E
    57301 
    57302 > color #14.9/a:2506 green yellow
    57303 
    57304 > color #14.9/a:2580-2585,3019 crimson
    57305 
    57306 > color #14.9/Y maroon
    57307 
    57308 > color #14.9/v orange
    57309 
    57310 > color #1.12 gray
    57311 
    57312 > volume #12.9 level 0.5
    57313 
    57314 > volume zone #12.9 range 2 nearAtoms #14.9/a:2549-2559 | #14.9/a:2580-2585 | #14.9/a:3019 | #1.12/a:1672 | #14.9/W:36
    57315 
    57316 > volume zone #12.9 range 3.5 nearAtoms #14.9/v:2-5 | #14.9/Y:72-76 | (#14.9/a:2602,2506&sidechain) newMap true modelId 999
    57317 
    57318 Opened d10_J62_c9 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    57319 shown at step 1, values float32 
    57320 
    57321 > color #999 light sky blue
    57322 
    57323 > volume #999 level 0.25
    57324 
    57325 > show #!12.9 models
    57326 
    57327 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.9.png width 800
    57328 > height 600 supersample 4
    57329 
    57330 > close #999
    57331 
    57332 > hide #!1.12#!12.9#!14.9 models
    57333 
    57334 > view A-loop-d10
    57335 
    57336 > show #!1.12#!12.10#!14.10 models
    57337 
    57338 > hide #14.10
    57339 
    57340 > show #14.10/a:2550-2558
    57341 
    57342 > show #14.10/a:2602&sidechain | #14.10/a:2602@C5',O3'
    57343 
    57344 > show #14.10/a:2506&sidechain
    57345 
    57346 > show #14.10/a:2580-2585,3019
    57347 
    57348 > show #14.10/Y:72-76/v:2-6
    57349 
    57350 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57351 
    57352 > color #14.10/a:2549-2559 cadet blue
    57353 
    57354 > color #14.10/a:2602 #0FAB7E
    57355 
    57356 > color #14.10/a:2506 green yellow
    57357 
    57358 > color #14.10/a:2580-2585,3019 crimson
    57359 
    57360 > color #14.10/Y maroon
    57361 
    57362 > color #14.10/v orange
    57363 
    57364 > color #1.12 gray
    57365 
    57366 > volume #12.10 level 0.5
    57367 
    57368 > volume zone #12.10 range 2 nearAtoms #14.10/v:2-5 | #14.10/Y:72-76 | #14.10/a:2549-2559 | (#14.10/a:2602,2506&sidechain) | #14.10/a:2580-2585 | #14.10/a:3019 | #1.12/a:1672
    57369 
    57370 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.0.png width 800
    57371 > height 600 supersample 4
    57372 
    57373 > hide #!1.12#!12.10#!14.10 models
    57374 
    57375 > show #!1.12 models
    57376 
    57377 > hide #1.12
    57378 
    57379 > view A-loop-d10
    57380 
    57381 > show #!1.12#!12.8#!14.8 models
    57382 
    57383 > hide #14.8
    57384 
    57385 > show #14.8/a:2550-2558
    57386 
    57387 > show #14.8/a:2602&sidechain | #14.8/a:2602@C5',O3'
    57388 
    57389 > show #14.8/a:2506&sidechain
    57390 
    57391 > show #14.8/a:2580-2585,3019
    57392 
    57393 > show #14.8/Y:72-76/v:2-6
    57394 
    57395 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57396 
    57397 > color #14.8/a:2549-2559 cadet blue
    57398 
    57399 > color #14.8/a:2602 #0FAB7E
    57400 
    57401 > color #14.8/a:2506 green yellow
    57402 
    57403 > color #14.8/a:2580-2585,3019 crimson
    57404 
    57405 > color #14.8/Y maroon
    57406 
    57407 > color #14.8/v orange
    57408 
    57409 > color #1.12 gray
    57410 
    57411 > volume #12.8 level 0.5
    57412 
    57413 > volume zone #12.8 range 2 nearAtoms #14.8/v:2-5 | #14.8/Y:72-76 | #14.8/a:2549-2559 | (#14.8/a:2602,2506&sidechain) | #14.8/a:2580-2585 | #14.8/a:3019 | #1.12/a:1672 | #14.3/a:2580-2585
    57414 
    57415 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.8.png width 800
    57416 > height 600 supersample 4
    57417 
    57418 > hide #!1.12#!12.8#!14.8 models
    57419 
    57420 > view A-loop-d10
    57421 
    57422 > show #!1.12#!12.1#!14.1 models
    57423 
    57424 > hide #14.1
    57425 
    57426 > show #14.1/a:2550-2558
    57427 
    57428 > show #14.1/a:2602&sidechain | #14.1/a:2602@C5',O3'
    57429 
    57430 > show #14.1/a:2506&sidechain
    57431 
    57432 > show #14.1/a:2580-2585,3019
    57433 
    57434 > show #14.1/Y:72-76/v:2-6
    57435 
    57436 > show #!14.2 models
    57437 
    57438 > hide #14.2
    57439 
    57440 > show #14.2/a:2553-2554:2552@O3
    57441 
    57442 > color #14.2/a:2552-2553 cadet blue
    57443 
    57444 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57445 
    57446 > color #14.1/a:2549-2559 cadet blue
    57447 
    57448 > hide #14.1/a:2554
    57449 
    57450 > show #14.1/a:2554@O3'
    57451 
    57452 > hide #14.1/a:2553
    57453 
    57454 > show #14.1/a:2553 & sidechain
    57455 
    57456 > color #14.1/a:2553 turquoise
    57457 
    57458 > color #14.1/a:2602 #0FAB7E
    57459 
    57460 > color #14.1/a:2506 green yellow
    57461 
    57462 > color #14.1/a:2580-2585,3019 crimson
    57463 
    57464 > color #14.1/Y maroon
    57465 
    57466 > color #14.1/v orange
    57467 
    57468 > color #1.12 gray
    57469 
    57470 > volume #12.1 level 0.5
    57471 
    57472 > volume zone #12.1 range 2 nearAtoms #14.1/v:2-5 | #14.1/Y:72-76 | #14.1/a:2549-2559 | (#14.1/a:2602,2506&sideonly) | #14.1/a:2580-2585 | #14.1/a:3019 | #1.12/a:1672 | #14.2/a:2553-2554
    57473 
    57474 > volume zone #12.1 range 2 nearAtoms #14.1/a:2553&sidechain newMap true
    57475 > modelId 999
    57476 
    57477 Opened d10_J54_c1 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    57478 shown at step 1, values float32 
    57479 
    57480 > color #999 light sky blue
    57481 
    57482 > volume #999 level 0.30
    57483 
    57484 > show #!12.1 models
    57485 
    57486 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.1.png width 800
    57487 > height 600 supersample 4
    57488 
    57489 > close #999
    57490 
    57491 > hide #!14.2 models
    57492 
    57493 > hide #!1.12#!12.1#!14.1 models
    57494 
    57495 > view A-loop-d10
    57496 
    57497 > show #!1.12#!12.2#!14.2 models
    57498 
    57499 > hide #14.2
    57500 
    57501 > show #14.2/a:2550-2558
    57502 
    57503 > show #14.2/a:2602&sidechain | #14.2/a:2602@C5',O3'
    57504 
    57505 > show #14.2/a:2506&sidechain
    57506 
    57507 > show #14.2/a:2580-2585,3019
    57508 
    57509 > show #14.2/Y:72-76/v:2-6
    57510 
    57511 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57512 
    57513 > color #14.2/a:2549-2559 cadet blue
    57514 
    57515 > color #14.2/a:2602 #0FAB7E
    57516 
    57517 > color #14.2/a:2506 green yellow
    57518 
    57519 > color #14.2/a:2580-2585,3019 crimson
    57520 
    57521 > color #14.2/Y maroon
    57522 
    57523 > color #14.2/v orange
    57524 
    57525 > color #1.12 gray
    57526 
    57527 > volume #12.2 level 0.5
    57528 
    57529 > volume zone #12.2 range 2 nearAtoms #14.2/v:2-5 | #14.2/Y:72-76 | #14.2/a:2549-2559 | (#14.2/a:2602,2506&sidechain) | #14.2/a:2580-2585 | #14.2/a:3019 | #1.12/a:1672
    57530 
    57531 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.2.png width 800
    57532 > height 600 supersample 4
    57533 
    57534 > hide #!1.12#!12.2#!14.2 models
    57535 
    57536 > view A-loop-d10
    57537 
    57538 > show #!1.12#!12.3#!14.3 models
    57539 
    57540 > hide #14.3
    57541 
    57542 > show #14.3/a:2550-2558
    57543 
    57544 > show #14.3/a:2602&sidechain | #14.3/a:2602@C5',O3'
    57545 
    57546 > show #14.3/a:2506&sidechain
    57547 
    57548 > show #14.3/a:2580-2585,3019
    57549 
    57550 > show #14.3/Y:72-76/v:2-6
    57551 
    57552 > show #!14.2 models
    57553 
    57554 > hide #14.2
    57555 
    57556 > show #14.2/a:2553-2554 & sidechain
    57557 
    57558 > color #14.2/a:2553-2554 turquoise
    57559 
    57560 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57561 
    57562 > color #14.3/a:2549-2559 cadet blue
    57563 
    57564 > color #14.3/a:2602 #0FAB7E
    57565 
    57566 > color #14.3/a:2506 green yellow
    57567 
    57568 > color #14.3/a:2580-2585,3019 crimson
    57569 
    57570 > color #14.3/Y maroon
    57571 
    57572 > color #14.3/v orange
    57573 
    57574 > color #1.12 gray
    57575 
    57576 > volume #12.3 level 0.5
    57577 
    57578 > volume zone #12.3 range 2 nearAtoms #14.3/a:2549-2559 | #14.3/a:2580-2585 | #14.3/a:3019 | #1.12/a:1672 | #14.2/a:2553-2554
    57579 
    57580 > volume zone #12.3 range 3.5 nearAtoms #14.3/v:2-5 | #14.3/Y:72-76 | (#14.3/a:2602,2506&sidechain) newMap true modelId 999
    57581 
    57582 Opened d10_J56_c3 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    57583 shown at step 1, values float32 
    57584 
    57585 > color #999 light sky blue
    57586 
    57587 > volume #999 level 0.30
    57588 
    57589 > show #!12.3 models
    57590 
    57591 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.3.png width 800
    57592 > height 600 supersample 4
    57593 
    57594 > close #999
    57595 
    57596 > hide #!14.2 models
    57597 
    57598 > hide #!1.12#!12.3#!14.3 models
    57599 
    57600 > view A-loop-d10
    57601 
    57602 > show #!1.12#!12.4#!14.4 models
    57603 
    57604 > hide #14.4
    57605 
    57606 > show #14.4/a:2550-2558
    57607 
    57608 > show #14.4/a:2602&sidechain | #14.4/a:2602@C5',O3'
    57609 
    57610 > show #14.4/a:2506&sidechain
    57611 
    57612 > show #14.4/a:2580-2585,3019
    57613 
    57614 > show #14.4/Y:72-76/v:2-6
    57615 
    57616 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57617 
    57618 > color #14.4/a:2549-2559 cadet blue
    57619 
    57620 > color #14.4/a:2602 #0FAB7E
    57621 
    57622 > color #14.4/a:2506 green yellow
    57623 
    57624 > color #14.4/a:2580-2585,3019 crimson
    57625 
    57626 > color #14.4/Y maroon
    57627 
    57628 > color #14.4/v orange
    57629 
    57630 > color #1.12 gray
    57631 
    57632 > volume #12.4 level 0.5
    57633 
    57634 > volume zone #12.4 range 2 nearAtoms #14.4/v:2-5 | #14.4/Y:72-76 | #14.4/a:2549-2559 | (#14.4/a:2602,2506&sidechain) | #14.4/a:2580-2585 | #14.4/a:3019 | #1.12/a:1672 | #14.3/a:2580-2585
    57635 
    57636 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.4.png width 800
    57637 > height 600 supersample 4
    57638 
    57639 > hide #!1.12#!12.4#!14.4 models
    57640 
    57641 > view A-loop-d10
    57642 
    57643 > show #!1.12#!12.5#!14.5 models
    57644 
    57645 > hide #14.5
    57646 
    57647 > show #14.5/a:2550-2558
    57648 
    57649 > show #14.5/a:2602&sidechain | #14.5/a:2602@C5',O3'
    57650 
    57651 > show #14.5/a:2506&sidechain
    57652 
    57653 > show #14.5/a:2580-2585,3019
    57654 
    57655 > show #14.5/Y:72-76/v:2-6
    57656 
    57657 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57658 
    57659 > color #14.5/a:2549-2559 cadet blue
    57660 
    57661 > color #14.5/a:2602 #0FAB7E
    57662 
    57663 > color #14.5/a:2506 green yellow
    57664 
    57665 > color #14.5/a:2580-2585,3019 crimson
    57666 
    57667 > color #14.5/Y maroon
    57668 
    57669 > color #14.5/v orange
    57670 
    57671 > color #1.12 gray
    57672 
    57673 > volume #12.5 level 0.5
    57674 
    57675 > volume zone #12.5 range 2 nearAtoms #14.5/v:2-5 | #14.5/Y:72-76 | #14.5/a:2549-2559 | (#14.5/a:2602,2506&sidechain) | #14.5/a:2580-2585 | #14.5/a:3019 | #1.12/a:1672 | #14.3/a:2580-2585
    57676 
    57677 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.5.png width 800
    57678 > height 600 supersample 4
    57679 
    57680 > hide #!1.12#!12.5#!14.5 models
    57681 
    57682 > view A-loop-d10
    57683 
    57684 > show #!1.12#!12.6#!14.6 models
    57685 
    57686 > hide #14.6
    57687 
    57688 > show #14.6/a:2550-2558
    57689 
    57690 > show #14.6/a:2602&sidechain | #14.6/a:2602@C5',O3'
    57691 
    57692 > show #14.6/a:2506&sidechain
    57693 
    57694 > show #14.6/a:2580-2585,3019
    57695 
    57696 > show #14.6/Y:72-76/v:2-6
    57697 
    57698 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57699 
    57700 > color #14.6/a:2549-2559 cadet blue
    57701 
    57702 > color #14.6/a:2602 #0FAB7E
    57703 
    57704 > color #14.6/a:2506 green yellow
    57705 
    57706 > color #14.6/a:2580-2585,3019 crimson
    57707 
    57708 > color #14.6/Y maroon
    57709 
    57710 > color #14.6/v orange
    57711 
    57712 > color #1.12 gray
    57713 
    57714 > volume #12.6 level 0.5
    57715 
    57716 > volume zone #12.6 range 2 nearAtoms #14.6/a:2549-2559 | #14.6/a:2580-2585 | #14.6/a:3019 | #1.12/a:1672
    57717 
    57718 > volume zone #12.6 range 3.5 nearAtoms #14.6/v:2-5 | #14.6/Y:72-76 | (#14.6/a:2602,2506&sidechain) newMap true modelId 999
    57719 
    57720 Opened d10_J59_c6 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    57721 shown at step 1, values float32 
    57722 
    57723 > color #999 light sky blue
    57724 
    57725 > volume #999 level 0.4
    57726 
    57727 > show #!12.6 models
    57728 
    57729 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.6.png width 800
    57730 > height 600 supersample 4
    57731 
    57732 > close #999
    57733 
    57734 > hide #!1.12#!12.6#!14.6 models
    57735 
    57736 > view A-loop-d10
    57737 
    57738 > show #!1.12#!12.7#!14.7 models
    57739 
    57740 > hide #14.7
    57741 
    57742 > show #14.7/a:2550-2558
    57743 
    57744 > show #14.7/a:2602&sidechain | #14.7/a:2602@C5',O3'
    57745 
    57746 > show #14.7/a:2506&sidechain
    57747 
    57748 > show #14.7/a:2580-2585,3019
    57749 
    57750 > show #14.7/Y:72-76/v:2-6
    57751 
    57752 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57753 
    57754 > color #14.7/a:2549-2559 cadet blue
    57755 
    57756 > color #14.7/a:2602 #0FAB7E
    57757 
    57758 > color #14.7/a:2506 green yellow
    57759 
    57760 > color #14.7/a:2580-2585,3019 crimson
    57761 
    57762 > color #14.7/Y maroon
    57763 
    57764 > color #14.7/v orange
    57765 
    57766 > color #1.12 gray
    57767 
    57768 > volume #12.7 level 0.5
    57769 
    57770 > volume zone #12.7 range 2 nearAtoms #14.7/a:2549-2559 | #14.7/a:2580-2585 | #14.7/a:3019 | #1.12/a:1672
    57771 
    57772 > volume zone #12.7 range 3.5 nearAtoms #14.7/v:2-5 | #14.7/Y:72-76 | (#14.7/a:2602,2506&sidechain) newMap true modelId 999
    57773 
    57774 Opened d10_J60_c7 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    57775 shown at step 1, values float32 
    57776 
    57777 > color #999 light sky blue
    57778 
    57779 > volume #999 level 0.40
    57780 
    57781 > show #!12.7 models
    57782 
    57783 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.7.png width 800
    57784 > height 600 supersample 4
    57785 
    57786 > close #999
    57787 
    57788 > hide #!1.12#!12.7#!14.7 models
    57789 
    57790 > view A-loop-d10
    57791 
    57792 > show #!1.12#!12.8#!14.8 models
    57793 
    57794 > hide #14.8
    57795 
    57796 > show #14.8/a:2550-2558
    57797 
    57798 > show #14.8/a:2602&sidechain | #14.8/a:2602@C5',O3'
    57799 
    57800 > show #14.8/a:2506&sidechain
    57801 
    57802 > show #14.8/a:2580-2585,3019
    57803 
    57804 > show #14.8/Y:72-76/v:2-6
    57805 
    57806 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57807 
    57808 > color #14.8/a:2549-2559 cadet blue
    57809 
    57810 > color #14.8/a:2602 #0FAB7E
    57811 
    57812 > color #14.8/a:2506 green yellow
    57813 
    57814 > color #14.8/a:2580-2585,3019 crimson
    57815 
    57816 > color #14.8/Y maroon
    57817 
    57818 > color #14.8/v orange
    57819 
    57820 > color #1.12 gray
    57821 
    57822 > volume #12.8 level 0.5
    57823 
    57824 > volume zone #12.8 range 2 nearAtoms #14.8/v:2-5 | #14.8/Y:72-76 | #14.8/a:2549-2559 | (#14.8/a:2602,2506&sidechain) | #14.8/a:2580-2585 | #14.8/a:3019 | #1.12/a:1672 | #14.3/a:2580-2585
    57825 
    57826 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.8.png width 800
    57827 > height 600 supersample 4
    57828 
    57829 > hide #!1.12#!12.8#!14.8 models
    57830 
    57831 > view A-loop-d10
    57832 
    57833 > show #!1.12#!12.9#!14.9 models
    57834 
    57835 > hide #14.9
    57836 
    57837 > show #14.9/a:2550-2558
    57838 
    57839 > show #14.9/a:2602&sidechain | #14.9/a:2602@C5',O3'
    57840 
    57841 > show #14.9/a:2506&sidechain
    57842 
    57843 > show #14.9/a:2580-2585,3019
    57844 
    57845 > show #14.9/Y:72-76/v:2-6
    57846 
    57847 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57848 
    57849 > color #14.9/a:2549-2559 cadet blue
    57850 
    57851 > color #14.9/W cadet blue
    57852 
    57853 > color #14.9/a:2602 #0FAB7E
    57854 
    57855 > color #14.9/a:2506 green yellow
    57856 
    57857 > color #14.9/a:2580-2585,3019 crimson
    57858 
    57859 > color #14.9/Y maroon
    57860 
    57861 > color #14.9/v orange
    57862 
    57863 > color #1.12 gray
    57864 
    57865 > volume #12.9 level 0.5
    57866 
    57867 > volume zone #12.9 range 2 nearAtoms #14.9/a:2549-2559 | #14.9/a:2580-2585 | #14.9/a:3019 | #1.12/a:1672 | #14.9/W:36
    57868 
    57869 > volume zone #12.9 range 3.5 nearAtoms #14.9/v:2-5 | #14.9/Y:72-76 | (#14.9/a:2602,2506&sidechain) newMap true modelId 999
    57870 
    57871 Opened d10_J62_c9 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    57872 shown at step 1, values float32 
    57873 
    57874 > color #999 light sky blue
    57875 
    57876 > volume #999 level 0.25
    57877 
    57878 > show #!12.9 models
    57879 
    57880 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.9.png width 800
    57881 > height 600 supersample 4
    57882 
    57883 > close #999
    57884 
    57885 > hide #!1.12#!12.9#!14.9 models
    57886 
    57887 > view A-loop-d10
    57888 
    57889 > show #!1.12#!12.10#!14.10 models
    57890 
    57891 > hide #14.10
    57892 
    57893 > show #14.10/a:2550-2558
    57894 
    57895 > show #14.10/a:2602&sidechain | #14.10/a:2602@C5',O3'
    57896 
    57897 > show #14.10/a:2506&sidechain
    57898 
    57899 > show #14.10/a:2580-2585,3019
    57900 
    57901 > show #14.10/Y:72-76/v:2-6
    57902 
    57903 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57904 
    57905 > color #14.10/a:2549-2559 cadet blue
    57906 
    57907 > color #14.10/a:2602 #0FAB7E
    57908 
    57909 > color #14.10/a:2506 green yellow
    57910 
    57911 > color #14.10/a:2580-2585,3019 crimson
    57912 
    57913 > color #14.10/Y maroon
    57914 
    57915 > color #14.10/v orange
    57916 
    57917 > color #1.12 gray
    57918 
    57919 > volume #12.10 level 0.5
    57920 
    57921 > volume zone #12.10 range 2 nearAtoms #14.10/v:2-5 | #14.10/Y:72-76 | #14.10/a:2549-2559 | (#14.10/a:2602,2506&sidechain) | #14.10/a:2580-2585 | #14.10/a:3019 | #1.12/a:1672
    57922 
    57923 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.0.png width 800
    57924 > height 600 supersample 4
    57925 
    57926 > hide #!1.12#!12.10#!14.10 models
    57927 
    57928 > view A-loop-dE
    57929 
    57930 Expected an objects specifier or a view name or a keyword 
    57931 
    57932 > show #!1.12#!23.1#!25.1 models
    57933 
    57934 > hide #25.1
    57935 
    57936 > show #25.1/a:2550-2558
    57937 
    57938 > show #25.1/a:2602&sidechain | #25.1/a:2602@C5',O3'
    57939 
    57940 > show #25.1/a:2580-2585,3019
    57941 
    57942 > show #25.1/Y:72-76/v:2-6
    57943 
    57944 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57945 
    57946 > color #25.1/a:2549-2559 cadet blue
    57947 
    57948 > color #25.1/a:2602 #0FAB7E
    57949 
    57950 > color #25.1/a:2506 green yellow
    57951 
    57952 > color #25.1/a:2580-2585,3019 crimson
    57953 
    57954 > color #25.1/Y maroon
    57955 
    57956 > color #25.1/v orange
    57957 
    57958 > color #1.12 gray
    57959 
    57960 > volume #23.1 level 0.1
    57961 
    57962 > volume zone #23.1 range 2 nearAtoms #25.1/v:2-5 | #25.1/Y:72-76 | #25.1/a:2549-2559 | (#25.1/a:2602,2506&sideonly) | #25.1/a:2580-2585 | #25.1/a:3019 | #1.12/a:1672
    57963 
    57964 > hide #!25.1 models
    57965 
    57966 > hide #!23.1 models
    57967 
    57968 > hide #!1.12 models
    57969 
    57970 > view A-loop-d10
    57971 
    57972 > show #!1.12#!12.1#!14.1 models
    57973 
    57974 > hide #14.1
    57975 
    57976 > show #14.1/a:2550-2558
    57977 
    57978 > show #14.1/a:2602&sidechain | #14.1/a:2602@C5',O3'
    57979 
    57980 > show #14.1/a:2506&sidechain
    57981 
    57982 > show #14.1/a:2580-2585,3019
    57983 
    57984 > show #14.1/Y:72-76/v:2-6
    57985 
    57986 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    57987 
    57988 > color #14.1/a:2549-2559 cadet blue
    57989 
    57990 > color #14.1/a:2602 #0FAB7E
    57991 
    57992 > color #14.1/a:2506 green yellow
    57993 
    57994 > color #14.1/a:2580-2585,3019 crimson
    57995 
    57996 > color #14.1/Y maroon
    57997 
    57998 > color #14.1/v orange
    57999 
    58000 > color #1.12 gray
    58001 
    58002 > volume #12.1 level 0.5
    58003 
    58004 > volume zone #12.1 range 2 nearAtoms #14.1/v:2-5 | #14.1/Y:72-76 | #14.1/a:2549-2559 | (#14.1/a:2602,2506&sidechain) | #14.1/a:2580-2585 | #14.1/a:3019 | #1.12/a:1672
    58005 
    58006 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.0.png width 800
    58007 > height 600 supersample 4
    58008 
    58009 > hide #!1.12#!12.1#!14.1 models
    58010 
    58011 > view A-loop-d10
    58012 
    58013 > show #!1.12#!12.1#!14.1 models
    58014 
    58015 > hide #14.1
    58016 
    58017 > show #14.1/a:2550-2558
    58018 
    58019 > show #14.1/a:2602&sidechain | #14.1/a:2602@C5',O3'
    58020 
    58021 > show #14.1/a:2506&sidechain
    58022 
    58023 > show #14.1/a:2580-2585,3019
    58024 
    58025 > show #14.1/Y:72-76/v:2-6
    58026 
    58027 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    58028 
    58029 > color #14.1/a:2549-2559 cadet blue
    58030 
    58031 > color #14.1/a:2602 #0FAB7E
    58032 
    58033 > color #14.1/a:2506 green yellow
    58034 
    58035 > color #14.1/a:2580-2585,3019 crimson
    58036 
    58037 > color #14.1/Y maroon
    58038 
    58039 > color #14.1/v orange
    58040 
    58041 > color #1.12 gray
    58042 
    58043 > volume #12.1 level 0.5
    58044 
    58045 > volume zone #12.1 range 2 nearAtoms #14.1/v:2-5 | #14.1/Y:72-76 | #14.1/a:2549-2559 | (#14.1/a:2602,2506&sidechain) | #14.1/a:2580-2585 | #14.1/a:3019 | #1.12/a:1672
    58046 
    58047 > view A-loop-d10
    58048 
    58049 > show #!1.12#!12.1#!14.1 models
    58050 
    58051 > hide #14.1
    58052 
    58053 > show #14.1/a:2550-2558
    58054 
    58055 > show #14.1/a:2602&sidechain | #14.1/a:2602@C5',O3'
    58056 
    58057 > show #14.1/a:2506&sidechain
    58058 
    58059 > show #14.1/a:2580-2585,3019
    58060 
    58061 > show #14.1/Y:72-76/v:2-6
    58062 
    58063 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    58064 
    58065 > color #14.1/a:2549-2559 cadet blue
    58066 
    58067 > color #14.1/a:2602 #0FAB7E
    58068 
    58069 > color #14.1/a:2506 green yellow
    58070 
    58071 > color #14.1/a:2580-2585,3019 crimson
    58072 
    58073 > color #14.1/Y maroon
    58074 
    58075 > color #14.1/v orange
    58076 
    58077 > color #1.12 gray
    58078 
    58079 > volume #12.1 level 0.5
    58080 
    58081 > volume zone #12.1 range 2 nearAtoms #14.1/v:2-5 | #14.1/Y:72-76 | #14.1/a:2549-2559 | (#14.1/a:2602,2506&sidechain) | #14.1/a:2580-2585 | #14.1/a:3019 | #1.12/a:1672
    58082 
    58083 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.1.png width 800
    58084 > height 600 supersample 4
    58085 
    58086 > hide #!1.12#!12.1#!14.1 models
    58087 
    58088 > view A-loop-d10
    58089 
    58090 > show #!1.12#!12.10#!14.10 models
    58091 
    58092 > hide #14.10
    58093 
    58094 > show #14.10/a:2550-2558
    58095 
    58096 > show #14.10/a:2602&sidechain | #14.10/a:2602@C5',O3'
    58097 
    58098 > show #14.10/a:2506&sidechain
    58099 
    58100 > show #14.10/a:2580-2585,3019
    58101 
    58102 > show #14.10/Y:72-76/v:2-6
    58103 
    58104 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    58105 
    58106 > color #14.10/a:2549-2559 cadet blue
    58107 
    58108 > color #14.10/a:2602 #0FAB7E
    58109 
    58110 > color #14.10/a:2506 green yellow
    58111 
    58112 > color #14.10/a:2580-2585,3019 crimson
    58113 
    58114 > color #14.10/Y maroon
    58115 
    58116 > color #14.10/v orange
    58117 
    58118 > color #1.12 gray
    58119 
    58120 > volume #12.10 level 0.5
    58121 
    58122 > volume zone #12.10 range 2 nearAtoms #14.10/v:2-5 | #14.10/Y:72-76 | #14.10/a:2549-2559 | (#14.10/a:2602,2506&sidechain) | #14.10/a:2580-2585 | #14.10/a:3019 | #1.12/a:1672
    58123 
    58124 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.0.png width 800
    58125 > height 600 supersample 4
    58126 
    58127 > hide #!1.12#!12.10#!14.10 models
    58128 
    58129 > view A-loop-d10
    58130 
    58131 > show #!1.12#!12.3#!14.3 models
    58132 
    58133 > hide #14.3
    58134 
    58135 > show #14.3/a:2550-2558
    58136 
    58137 > show #14.3/a:2602&sidechain | #14.3/a:2602@C5',O3'
    58138 
    58139 > show #14.3/a:2506&sidechain
    58140 
    58141 > show #14.3/a:2580-2585,3019
    58142 
    58143 > show #14.3/Y:72-76/v:2-6
    58144 
    58145 > show #!14.8 models
    58146 
    58147 > hide #14.8
    58148 
    58149 > show #14.8/a:2553-2559
    58150 
    58151 > color #14.8/a:2553-2559 turquoise
    58152 
    58153 > color #14.3/a:2549-2559 cadet blue
    58154 
    58155 > color #14.3/a:2602 #0FAB7E
    58156 
    58157 > color #14.3/a:2506 green yellow
    58158 
    58159 > color #14.3/a:2580-2585,3019 crimson
    58160 
    58161 > color #14.3/Y maroon
    58162 
    58163 > color #14.3/v orange
    58164 
    58165 > color #1.12 gray
    58166 
    58167 > volume #12.3 level 0.5
    58168 
    58169 > volume zone #12.3 range 2 nearAtoms #14.3/a:2549-2559 | #14.3/a:2580-2585 | #14.3/a:3019 | #1.12/a:1672 | #14.8/a:2553-2559
    58170 
    58171 > volume zone #12.3 range 3.5 nearAtoms #14.3/v:2-5 | #14.3/Y:72-76 | (#14.3/a:2602,2506&sidechain) newMap true modelId 999
    58172 
    58173 Opened d10_J56_c3 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    58174 shown at step 1, values float32 
    58175 
    58176 > color #999 light sky blue
    58177 
    58178 > volume #999 level 0.30
    58179 
    58180 > show #!12.3 models
    58181 
    58182 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.3.png width 800
    58183 > height 600 supersample 4
    58184 
    58185 > close #999
    58186 
    58187 > hide #!14.2 models
    58188 
    58189 > hide #!1.12#!12.3#!14.3 models
    58190 
    58191 > hide #!14.8 models
    58192 
    58193 > view A-loop-d10
    58194 
    58195 > show #!1.12#!12.9#!14.9 models
    58196 
    58197 > hide #14.9
    58198 
    58199 > show #14.9/a:2550-2558
    58200 
    58201 > show #14.9/a:2602&sidechain | #14.9/a:2602@C5',O3'
    58202 
    58203 > show #14.9/a:2506&sidechain
    58204 
    58205 > show #14.9/a:2580-2585,3019
    58206 
    58207 > show #14.9/Y:72-76/v:2-6
    58208 
    58209 > show #1.12/a:1672 | #1.12/a:1673@O5',OP1,OP2,OP3,P | #1.12/a:1671@O3'
    58210 
    58211 > color #14.9/a:2549-2559 cadet blue
    58212 
    58213 > color #14.9/W cadet blue
    58214 
    58215 > color #14.9/a:2602 #0FAB7E
    58216 
    58217 > color #14.9/a:2506 green yellow
    58218 
    58219 > color #14.9/a:2580-2585,3019 crimson
    58220 
    58221 > color #14.9/Y maroon
    58222 
    58223 > color #14.9/v orange
    58224 
    58225 > color #1.12 gray
    58226 
    58227 > volume #12.9 level 0.5
    58228 
    58229 > volume zone #12.9 range 2 nearAtoms #14.9/a:2549-2559 | #14.9/a:2580-2585 | #14.9/a:3019 | #1.12/a:1672 | #14.9/W:36
    58230 
    58231 > volume zone #12.9 range 3.5 nearAtoms #14.9/v:2-5 | #14.9/Y:72-76 | (#14.9/a:2602,2506&sidechain) newMap true modelId 999
    58232 
    58233 Opened d10_J62_c9 zone as #999, grid size 391,421,391, pixel 0.7,0.7,0.7,
    58234 shown at step 1, values float32 
    58235 
    58236 > color #999 light sky blue
    58237 
    58238 > volume #999 level 0.25
    58239 
    58240 > show #!12.9 models
    58241 
    58242 > view matrix camera
    58243 > -0.48957,-0.74484,0.45335,172.17,-0.87152,0.43447,-0.22734,159.37,-0.027632,-0.50639,-0.86187,106.14
    58244 
    58245 > view A-loop-d10
    58246 
    58247 > view matrix
    58248 
    58249 view matrix camera
    58250 -0.92418,-0.38192,0.0041262,148.55,-0.36014,0.86777,-0.34243,157.1,0.1272,-0.31795,-0.93955,110.55 
    58251 view matrix models
    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#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#999,1,0,0,0,0,1,0,0,0,0,1,0,#999.1,1,0,0,0,0,1,0,0,0,0,1,0 
    58253  
    58254 
    58255 > clip list
    58256 
    58257 Using 2 clip planes: 
    58258 near offset -7.7439, axis -0.004,0.342,0.940, point 152.4,172.1,136.1) 
    58259 far offset 11.376, axis 0.004,-0.342,-0.940, point 152.3,178.6,154.1) 
    58260 
    58261 > view name A-loop-d10c9
    58262 
    58263 > hbonds #25.9/a:2553-2554 restrict cross #25.9/a:2553-2554 | #25.9/a:2580-2583
    58264 
    58265 Expected a keyword 
    58266 
    58267 > hbonds #25.9/a:2553-2554 restrict cross #25.9/a:2553-2554 | #25.9/a:2580-2583
    58268 
    58269 Expected a keyword 
    58270 
    58271 > hbonds #25.9/a:2553-2554
    58272 
    58273 264 hydrogen bonds found 
    58274 
    58275 > hbonds #25.9/a:2553-2554 restrict both
    58276 
    58277 0 hydrogen bonds found 
    58278 
    58279 > hbonds #25.9/a:2553-2554 #25.9/a:2553-2554
    58280 
    58281 264 hydrogen bonds found 
    58282 
    58283 > hbonds #25.9/a:2553-2554 restrict #25.9
    58284 
    58285 12 hydrogen bonds found 
    58286 
    58287 > hbonds #25.9/a:2553-2554 restrict #25.9 color white
    58288 
    58289 12 hydrogen bonds found 
    58290 
    58291 > hbonds #14.9/a:2553-2554 restrict #14.9 color white
    58292 
    58293 3 hydrogen bonds found 
    58294 
    58295 > hbonds #14.9/a:2553-2554 restrict #14.9 color yellow
    58296 
    58297 3 hydrogen bonds found 
    58298 
    58299 > hbonds #14.9/a:2553-2554 & sidechain restrict #14.9 color yellow
    58300 
    58301 2 hydrogen bonds found 
    58302 
    58303 > view A-loop-d10c9
    58304 
    58305 > view name A-loop-d10c9
    58306 
    58307 > clip list
    58308 
    58309 Using 2 clip planes: 
    58310 near offset -7.3732, axis -0.004,0.342,0.940, point 152.4,172.2,136.5) 
    58311 far offset 17.083, axis 0.004,-0.342,-0.940, point 152.3,180.6,159.4) 
    58312 
    58313 > ~hbonds #14.9/a:2553-2554 & sidechain restrict #14.9 color yellow
    58314 
    58315 Expected a keyword 
    58316 
    58317 > ~hbonds #14.9/a:2553-2554 & sidechain restrict #14.9
    58318 
    58319 Expected a keyword 
    58320 
    58321 > close #14.9.3
    58322 
    58323 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.9_hoogsteen.png
    58324 > width 800 height 600 supersample 4
    58325 
    58326 > close #999
    58327 
    58328 > hbonds #14.9/a:2553-2554 & sidechain restrict #14.9 color yellow
    58329 
    58330 2 hydrogen bonds found 
    58331 
    58332 > save /Users/dalar193/Desktop/A_loop_new/A-loop_delta10_class.9_hoogsteen.png
    58333 > width 800 height 600 supersample 4
    58334 
    58335 > close #999
    58336 
    58337 > close #14.9.3
    58338 
    58339 > hide #!1.12#!12.9#!14.9 models
    58340 
    58341 > view A-loop-d9
    58342 
    58343 > show #!1.1#!1.2 models
    58344 
    58345 > hide #1.2
    58346 
    58347 > show #1.2/a:2550-2558
    58348 
    58349 > show #1.2/a:2602&sidechain | #1.2/a:2602@C5',O3'
    58350 
    58351 > show #1.2/a:2580-2585,3019
    58352 
    58353 > show #1.2/Y:72-76/v:2-6
    58354 
    58355 > show #1.2/a:1672 | #1.2/a:1673@O5',OP1,OP2,OP3,P | #1.2/a:1671@O3'
    58356 
    58357 > style #1.2/a:2552@CM2 sphere
    58358 
    58359 Changed 1 atom style 
    58360 
    58361 > size #1.2/a:2552@CM2 atomRadius 0.5
    58362 
    58363 Changed 1 atom radii 
    58364 
    58365 > color #1.2/a:2549-2559 cadet blue
    58366 
    58367 > color #1.2/a:2552@CM2 sea green
    58368 
    58369 > color #1.2/a:2602 #0FAB7E
    58370 
    58371 > color #1.2/a:2506 green yellow
    58372 
    58373 > color #1.2/a:2580-2585,3019 crimson
    58374 
    58375 > color #1.2/Y maroon
    58376 
    58377 > color #1.2/v orange
    58378 
    58379 > color #1.2/a:1665-1680 gray
    58380 
    58381 > volume #1.1 level 0.015
    58382 
    58383 > volume zone #1.1 range 2 nearAtoms #1.2/v:2-5 | #1.2/Y:72-76 | #1.2/a:2549-2559 | (#1.2/a:2602,2506&sideonly) | #1.2/a:2580-2585 | #1.12/a:1672
    58384 
    58385 > save /Users/dalar193/wd/deltaRibosomes/figure_A-loop_new.cxs
    58386 
    58387 ——— End of log from Fri Jul 4 17:41:34 2025 ———
    58388 
    58389 opened ChimeraX session 
    58390 
    58391 > windowsize 800 800
    58392 
    58393 > view list
    58394 
    58395 Named views: A-loop-d10, A-loop-d10c9, A-loop-d9, A2503_view4_map,
    58396 A2503_view5_map 
    58397 
    58398 > view matrix camera
    58399 > 0.99651,0.065722,-0.051478,136.46,0.06267,-0.9963,-0.058813,193.93,-0.055153,0.055382,-0.99694,80.747
    58400 
    58401 > ~clip
    58402 
    58403 > show #!1.1 models
    58404 
    58405 > volume #1.1 level 0.010000
    58406 
    58407 > show #!1.2 models
    58408 
    58409 > hide #1.2
    58410 
    58411 > color #1.2/a:2249-2252 sea green
    58412 
    58413 > color #1.2/a:2058-2066 cornflower blue
    58414 
    58415 > color #1.2/a:2445-2450 light pink
    58416 
    58417 > color #1.2/a:830 tan
    58418 
    58419 > color #1.2/a:945 #B3A0EB
    58420 
    58421 > color #1.2/a white target p
    58422 
    58423 > color #1.2/a:2449 firebrick target a
    58424 
    58425 > color #6.4/a:2449#6.5/a:2449#6.6/a:2449#6.8/a:2449 hot pink target a
    58426 
    58427 > color
    58428 > #14.1/a:2449#14.2/a:2449#14.4/a:2449#14.5/a:2449#14.6/a:2449#14.8/a:2449 hot
    58429 > pink target a
    58430 
    58431 > color #6.10/a:2449#14.10/a:2449 dark turquoise target a
    58432 
    58433 > ~show #1.2
    58434 
    58435 > ~hbonds #1.2
    58436 
    58437 > name to_show #1.2/a:2058-2065,2250-2252,2445-2451,2499-2506/Y:73-76,101/Z:73-76,101 | (#1.2/a:830,945 & sidechain)
    58438 
    58439 > show to_show
    58440 
    58441 > ~cartoon #1.2
    58442 
    58443 > cartoon to_show
    58444 
    58445 > ~cartoon #1.2/a:830,945
    58446 
    58447 > transparency #1.2 60 target c
    58448 
    58449 > hbonds to_show & sidechain restrict both color white
    58450 
    58451 43 hydrogen bonds found 
    58452 
    58453 > volume #1.1 color black transparency 0.8
    58454 
    58455 > volume zone #1.1 nearAtoms #1.2/a:2449 & sidechain range 2
    58456 
    58457 > bond #1.2/Y:76@N3':101@C
    58458 
    58459 Created 0 bonds 
    58460 
    58461 > bond #1.2/Z:76@N3':101@C
    58462 
    58463 Created 0 bonds 
    58464 
    58465 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    58466 
    58467 > style #1.2/Y:101 ball
    58468 
    58469 Changed 8 atom styles 
    58470 
    58471 > style #1.2/Z:101 ball
    58472 
    58473 Changed 8 atom styles 
    58474 
    58475 > size #1.2/Y:101:76@N3' ballScale 0.10 stickRadius 0.06
    58476 
    58477 Changed 8 bond radii, 1 ball scales 
    58478 
    58479 > size #1.2/Z:101:76@N3' ballScale 0.10 stickRadius 0.06
    58480 
    58481 Changed 8 bond radii, 1 ball scales 
    58482 
    58483 > clip near -18.32 far 2.134
    58484 
    58485 > windowsize 600 600
    58486 
    58487 > lighting simple
    58488 
    58489 > lighting full
    58490 
    58491 > lighting soft
    58492 
    58493 > lighting full
    58494 
    58495 > lighting soft
    58496 
    58497 > lighting simple
    58498 
    58499 > lighting soft
    58500 
    58501 > lighting simple
    58502 
    58503 > lighting full
    58504 
    58505 > lighting soft
    58506 
    58507 > lighting simple
    58508 
    58509 > lighting full
    58510 
    58511 > lighting simple
    58512 
    58513 > view matrix
    58514 
    58515 view matrix camera
    58516 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.63,-0.055153,0.055382,-0.99694,80.364 
    58517 view matrix models
    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10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.3,1,0,0,0,0,1,0,0,0,0,1,0,#7,1,0,0,0,0,1,0,0,0,0,1,0 
    58519  
    58520 
    58521 > color #1.2/a:2499-2506 green yellow
    58522 
    58523 > color #1.2/a:2449 hot pink
    58524 
    58525 > color #1.2/a:2449 light pink
    58526 
    58527 > color #1.2/a:2449 hot pink target a
    58528 
    58529 > color #1.2/a:2449@O & sidechain red target a
    58530 
    58531 > color #1.2/a:2449@O* & sidechain red target a
    58532 
    58533 > color #1.2/a:2449@N* & sidechain blue target a
    58534 
    58535 > color #1.2/a:2449@N* blue target a
    58536 
    58537 > color #1.2/a:2449 light pink
    58538 
    58539 > color #1.2/a:2449@N* blue target a
    58540 
    58541 [Repeated 1 time(s)]
    58542 
    58543 > color #1.2/a:2449 light pink
    58544 
    58545 > color #1.2/a:2449@N* blue target a
    58546 
    58547 [Repeated 1 time(s)]
    58548 
    58549 > color #1.2/a:2449 light pink
    58550 
    58551 > color #1.2/a:2449@N* blue target a
    58552 
    58553 > color #1.2/a:2449@O* blue target a
    58554 
    58555 > color #1.2/a:2449 light pink
    58556 
    58557 > color #1.2/a:2449@N* blue target a
    58558 
    58559 > color #1.2/a:2449@O* red target a
    58560 
    58561 > color #1.2/a:2449 light pink
    58562 
    58563 > color #1.2/a:2449,2251,2065,2445@N* blue target a
    58564 
    58565 > color #1.2/a:2449,2251,2065,2445@O* red target a
    58566 
    58567 > color #1.2/a:2449 light pink
    58568 
    58569 > color #1.2/a:2449,2251,2065,2445,2501@N* blue target a
    58570 
    58571 > color #1.2/a:2449,2251,2065,2445,2501@O* red target a
    58572 
    58573 > color #1.2/a:2449 hot pink target a
    58574 
    58575 > color #1.2/a:2449,2251,2065,2445,2501@N* blue target a
    58576 
    58577 > color #1.2/a:2449,2251,2065,2445,2501@O* red target a
    58578 
    58579 > view matrix
    58580 
    58581 view matrix camera
    58582 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.64,-0.055153,0.055382,-0.99694,80.465 
    58583 view matrix models
    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10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.3,1,0,0,0,0,1,0,0,0,0,1,0,#7,1,0,0,0,0,1,0,0,0,0,1,0 
    58585  
    58586 
    58587 > view matrix camera
    58588 > 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.63,-0.055153,0.055382,-0.99694,80.364
    58589 
    58590 > view matrix camera
    58591 > 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.64,-0.055153,0.055382,-0.99694,80.465
    58592 
    58593 > view matrix camera
    58594 > 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.63,-0.055153,0.055382,-0.99694,80.364
    58595 
    58596 [Repeated 1 time(s)]
    58597 
    58598 > distance style #1.2/a:2449@N3 #1.2/a:2065@O2 color yellow
    58599 
    58600 > distance #1.2/a:2449@N3 #1.2/a:2065@O2 color yellow
    58601 
    58602 Distance between 8emm #1.2/a H2U 2449 N3 and C 2065 O2: 2.867Å 
    58603 
    58604 > ~distance #1.2/a:2449@N3 #1.2/a:2065@O2 color yellow
    58605 
    58606 Expected fewer arguments 
    58607 
    58608 > hide #!8 models
    58609 
    58610 > show #!8 models
    58611 
    58612 > close #8
    58613 
    58614 > view matrix camera
    58615 > 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.63,-0.055153,0.055382,-0.99694,80.364
    58616 
    58617 > view matrix camera
    58618 > 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.64,-0.055153,0.055382,-0.99694,80.465
    58619 
    58620 > clip near -18.281 far 4.6142
    58621 
    58622 > clip list
    58623 
    58624 Using 2 clip planes: 
    58625 near offset -18.281, axis 0.051,0.059,0.997, point 141.5,184.9,112.3) 
    58626 far offset 0.66152, axis -0.051,-0.059,-0.997, point 142.5,186,131.2) 
    58627 
    58628 > hide #1.2/a:830,945
    58629 
    58630 > color #1.2/a:2449@N3 #1.2/a:2065@O2 yellow target hbond
    58631 
    58632 Invalid "target" argument: Character 'h' is not an allowed target, must be one
    58633 of acrsbmpfl 
    58634 
    58635 > color #1.2/a:2449@N3 & hbond yellow
    58636 
    58637 Expected a color or one of 'byatom', 'bychain', 'byelement', 'byhetero',
    58638 'byidentity', 'bymodel', 'bynucleotide', 'bypolymer', 'fromatoms',
    58639 'fromcartoons', 'fromribbons', or 'random' or a keyword 
    58640 
    58641 > color yellow #1.2/a:2449@N3 & hbond
    58642 
    58643 Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
    58644 'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword 
    58645 
    58646 > ui tool show "Selection Inspector"
    58647 
    58648 > color =sel #ffff3f pseudobonds
    58649 
    58650 > color =sel yellow pseudobonds
    58651 
    58652 > setattr p color yellow #1.2/a:2449@N3:#1.2/a:2065@O2
    58653 
    58654 Expected a keyword 
    58655 
    58656 > setattr p color yellow #1.2/a:2449@N3 #1.2/a:2065@O2
    58657 
    58658 Expected a keyword 
    58659 
    58660 > setattr p color yellow #1.2/a:2449@N3#1.2/a:2065@O2
    58661 
    58662 Expected a keyword 
    58663 
    58664 > setattr p color yellow #1.2/a:2449#1.2/a:2065
    58665 
    58666 Expected a keyword 
    58667 
    58668 > setattr p color yellow #1.2/a:2449,2065
    58669 
    58670 Expected a keyword 
    58671 
    58672 > setattr p color white #1.2/a:2449,2065
    58673 
    58674 Expected a keyword 
    58675 
    58676 > select clear
    58677 
    58678 > setattr p color white #1.2/a:2449,2065
    58679 
    58680 Expected a keyword 
    58681 
    58682 > setattr p color white
    58683 
    58684 Assigning color attribute to 3581 items 
    58685 
    58686 > setattr p color yellow
    58687 
    58688 Assigning color attribute to 3581 items 
    58689 
    58690 > setattr p color whote
    58691 
    58692 Assigning color attribute to 3581 items 
    58693 Invalid color name or specifier 
    58694 
    58695 > setattr p color white
    58696 
    58697 Assigning color attribute to 3581 items 
    58698 
    58699 > select clear
    58700 
    58701 > setattr p color yellow #1.2/a:2449,2065
    58702 
    58703 Expected a keyword 
    58704 
    58705 > setattr p color yellow /a:2449/a:2065
    58706 
    58707 Expected a keyword 
    58708 
    58709 > setattr p color yellow /a:2449,2065
    58710 
    58711 Expected a keyword 
    58712 
    58713 > setattr p color yellow /a:2449
    58714 
    58715 Expected a keyword 
    58716 
    58717 > setattr p color yellow #1.2/a:2449
    58718 
    58719 Expected a keyword 
    58720 
    58721 > color #1.2/a:2449 yellow
    58722 
    58723 > color #1.2/a:2449 yellow target p
    58724 
    58725 > color #1.2/a:2449,2065 yellow target p
    58726 
    58727 > color #1.2/a:2449 hot pink target a
    58728 
    58729 > color #1.2/a:2449,2251,2065,2445,2501@N* blue target a
    58730 
    58731 > color #1.2/a:2449,2251,2065,2445,2501@O* red target a
    58732 
    58733 > color #1.2/a:2445-2451 light pink
    58734 
    58735 > color #1.2/a:2449,2251,2065,2445,2501@N* blue target a
    58736 
    58737 > color #1.2/a:2449,2251,2065,2445,2501@O* red target a
    58738 
    58739 > color #1.2/a@O* red target a
    58740 
    58741 > color #1.2/a@N* blue target a
    58742 
    58743 > view matrix camera
    58744 > 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.63,-0.055153,0.055382,-0.99694,80.364
    58745 
    58746 > windowsize 800 800
    58747 
    58748 > color #1.2/a white target p
    58749 
    58750 > color #1.2/a:2449 yellow target p
    58751 
    58752 > color #1.2/a:2449,2065 yellow target p
    58753 
    58754 > color #1.2/a:2449,2251 yellow target p
    58755 
    58756 > color #1.2/a:2449,2065 yellow target p
    58757 
    58758 > color #1.2/a:2449,2446 yellow target p
    58759 
    58760 > color #1.2/a:2449,2501 yellow target p
    58761 
    58762 > view matrix camera
    58763 > 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.63,-0.055153,0.055382,-0.99694,80.364
    58764 
    58765 > color #1.2/a:2449,2251 yellow target p
    58766 
    58767 > color #1.2/a:2449,2065 yellow target p
    58768 
    58769 > color #1.2/a:2449,2446 yellow target p
    58770 
    58771 > color #1.2/a:2449,2501 yellow target p
    58772 
    58773 > view matrix camera
    58774 > 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.63,-0.055153,0.055382,-0.99694,80.364
    58775 
    58776 > color #1.2/Z rebecca purple
    58777 
    58778 > color #1.2/a:2055-2065 cornflower blue
    58779 
    58780 > color #1.2/a:2249-2252 peach puff
    58781 
    58782 > color #1.2/a:2445-2451 light pink
    58783 
    58784 > color #1.2/a:2499-2509 green yellow
    58785 
    58786 > color #1.2/a:2583-2585 orange
    58787 
    58788 > color #1.2/a:2602 medium sea green
    58789 
    58790 > color #1.2/a:2576 violet
    58791 
    58792 > color #1.2/v saddle brown
    58793 
    58794 > color #1.2/a:2445-2451 light pink
    58795 
    58796 > color #1.2/a:2449 hot pink target a
    58797 
    58798 > color #1.2/a:2449,2251,2065,2445,2501@N* blue target a
    58799 
    58800 > color #1.2/a:2449,2251,2065,2445,2501@O* red target a
    58801 
    58802 > color #1.2/a:2449,2251 yellow target p
    58803 
    58804 > color #1.2/a:2449,2065 yellow target p
    58805 
    58806 > color #1.2/a:2449,2446 yellow target p
    58807 
    58808 > color #1.2/a:2449,2501 yellow target p
    58809 
    58810 > save /Users/dalar193/Desktop/image187.png supersample 3
    58811 
    58812 > color #1.2/a@N* blue target a
    58813 
    58814 > color #1.2/a@O* red target a
    58815 
    58816 > save /Users/dalar193/Desktop/image188.png supersample 3
    58817 
    58818 > color #1.2/Z rebecca purple
    58819 
    58820 > color #1.2/a:2055-2065 cornflower blue
    58821 
    58822 > color #1.2/a:2249-2252 peach puff
    58823 
    58824 > color #1.2/a:2445-2451 light pink
    58825 
    58826 > color #1.2/a:2499-2509 green yellow
    58827 
    58828 > color #1.2/a:2583-2585 orange
    58829 
    58830 > color #1.2/a:2602 medium sea green
    58831 
    58832 > color #1.2/a:2576 violet
    58833 
    58834 > color #1.2/v saddle brown
    58835 
    58836 > color #1.2/a:2445-2451 light pink
    58837 
    58838 > color #1.2/a:2449 hot pink target a
    58839 
    58840 > color #1.2/a:2449,2251,2065,2445,2501@N* blue target a
    58841 
    58842 > color #1.2/a:2449,2251,2065,2445,2501@O* red target a
    58843 
    58844 > color #1.2/a:2449,2251,2065,2445,2446,2501@N* blue target a
    58845 
    58846 > color #1.2/a:2449,2251,2065,2445,2446,2501@O* red target a
    58847 
    58848 > color #1.2/a:2449,2251 yellow target p
    58849 
    58850 > color #1.2/a:2449,2065 yellow target p
    58851 
    58852 > color #1.2/a:2449,2445 yellow target p
    58853 
    58854 > color #1.2/a:2449,2446 yellow target p
    58855 
    58856 > color #1.2/a:2449,2501 yellow target p
    58857 
    58858 > color #1.2/a:2249-2252 sea green
    58859 
    58860 > color #1.2/a:2058-2066 cornflower blue
    58861 
    58862 > color #1.2/a:2445-2450 light pink
    58863 
    58864 > color #1.2/a:830 tan
    58865 
    58866 > color #1.2/a:945 #B3A0EB
    58867 
    58868 > color #1.2/a white target p
    58869 
    58870 > color #1.2/a:2449 firebrick target a
    58871 
    58872 > color #1.2/a:2445-2451 light pink
    58873 
    58874 > color #1.2/a:2449 hot pink target a
    58875 
    58876 > color #1.2/a:2449,2251,2065,2445,2446,2501@N* blue target a
    58877 
    58878 > color #1.2/a:2449,2251,2065,2445,2446,2501@O* red target a
    58879 
    58880 > color #1.2/a:2449,2251 yellow target p
    58881 
    58882 > color #1.2/a:2449,2065 yellow target p
    58883 
    58884 > color #1.2/a:2449,2445 yellow target p
    58885 
    58886 > color #1.2/a:2449,2446 yellow target p
    58887 
    58888 > color #1.2/a:2449,2501 yellow target p
    58889 
    58890 > hide #1.2/a:2499
    58891 
    58892 > hide #1.2/a:2499 target c
    58893 
    58894 > view matrix camera
    58895 > 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.63,-0.055153,0.055382,-0.99694,80.364
    58896 
    58897 > ~clip
    58898 
    58899 > clip near -18.281 far 0.66152
    58900 
    58901 > show #1.2/a:2499 target c
    58902 
    58903 > show #1.2/a:2499
    58904 
    58905 > view matrix
    58906 
    58907 view matrix camera
    58908 0.96722,0.2529,-0.02304,138.44,0.23142,-0.84042,0.49004,214.57,0.10457,-0.47931,-0.87139,90.254 
    58909 view matrix models
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10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.3,1,0,0,0,0,1,0,0,0,0,1,0,#7,1,0,0,0,0,1,0,0,0,0,1,0 
    58911  
    58912 
    58913 > view matrix
    58914 
    58915 view matrix camera
    58916 0.93739,0.34815,0.009621,139.68,0.31571,-0.86108,0.39858,210.6,0.14705,-0.37059,-0.91708,88.037 
    58917 view matrix models
    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10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.3,1,0,0,0,0,1,0,0,0,0,1,0,#7,1,0,0,0,0,1,0,0,0,0,1,0 
    58919  
    58920 
    58921 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* blue target a
    58922 
    58923 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* red target a
    58924 
    58925 > color #1.2/a:2249-2252 sea green
    58926 
    58927 > color #1.2/a:2058-2066 cornflower blue
    58928 
    58929 > color #1.2/a:2445-2450 light pink
    58930 
    58931 > color #1.2/a:830 tan
    58932 
    58933 > color #1.2/a:945 #B3A0EB
    58934 
    58935 > color #1.2/a white target p
    58936 
    58937 > color #1.2/a:2449 firebrick target a
    58938 
    58939 > color #1.2/a:2445-2451 light pink
    58940 
    58941 > color #1.2/a:2449 hot pink target a
    58942 
    58943 > color #1.2/a:2449,2251,2065@N* blue target a
    58944 
    58945 > color #1.2/a:2449,2251,2065@O* red target a
    58946 
    58947 > color #1.2/a:2445,2446,2447,2501@N* & sidechain blue target a
    58948 
    58949 > color #1.2/a:2445,2446,2447,2501@O* & sidechain red target a
    58950 
    58951 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    58952 
    58953 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    58954 
    58955 > color #1.2/a:2249-2252 sea green
    58956 
    58957 > color #1.2/a:2058-2066 cornflower blue
    58958 
    58959 > color #1.2/a:2445-2450 light pink
    58960 
    58961 > color #1.2/a:830 tan
    58962 
    58963 > color #1.2/a:945 #B3A0EB
    58964 
    58965 > color #1.2/a white target p
    58966 
    58967 > color #1.2/a:2449 firebrick target a
    58968 
    58969 > color #1.2/a:2445-2451 light pink
    58970 
    58971 > color #1.2/a:2449 hot pink target a
    58972 
    58973 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    58974 
    58975 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    58976 
    58977 > color #1.2/a:2499-2506 light green
    58978 
    58979 > color #1.2/a:2499-2506 light yellow
    58980 
    58981 > color #1.2/a:2499-2506 green yellow
    58982 
    58983 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    58984 
    58985 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    58986 
    58987 > color #1.2/a:2249-2252 sea green
    58988 
    58989 > color #1.2/a:2058-2066 cornflower blue
    58990 
    58991 > color #1.2/a:2445-2450 light pink
    58992 
    58993 > color #1.2/a:2499-2506 green yellow
    58994 
    58995 > color #1.2/a:2445-2451 light pink
    58996 
    58997 > color #1.2/a:2449 hot pink target a
    58998 
    58999 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59000 
    59001 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59002 
    59003 > color #1.2/a white target p
    59004 
    59005 > color #1.2/a:2449,2251 yellow target p
    59006 
    59007 > color #1.2/a:2449,2065 yellow target p
    59008 
    59009 > color #1.2/a:2449,2445 yellow target p
    59010 
    59011 > color #1.2/a:2449,2446 yellow target p
    59012 
    59013 > color #1.2/a:2449,2501 yellow target p
    59014 
    59015 > view matrix
    59016 
    59017 view matrix camera
    59018 0.93739,0.34815,0.009621,139.68,0.31571,-0.86108,0.39858,210.6,0.14705,-0.37059,-0.91708,88.037 
    59019 view matrix models
    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10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.3,1,0,0,0,0,1,0,0,0,0,1,0,#7,1,0,0,0,0,1,0,0,0,0,1,0 
    59021  
    59022 
    59023 > view matrix camera
    59024 > 0.93739,0.34815,0.009621,139.68,0.31571,-0.86108,0.39858,210.6,0.14705,-0.37059,-0.91708,88.037
    59025 
    59026 > view matrix camera
    59027 > 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.63,-0.055153,0.055382,-0.99694,80.364
    59028 
    59029 > view matrix camera
    59030 > 0.93739,0.34815,0.009621,139.68,0.31571,-0.86108,0.39858,210.6,0.14705,-0.37059,-0.91708,88.037
    59031 
    59032 > lighting soft
    59033 
    59034 > lighting full
    59035 
    59036 > lighting simple
    59037 
    59038 > lighting full
    59039 
    59040 > lighting simple
    59041 
    59042 [Repeated 1 time(s)]
    59043 
    59044 > lighting full
    59045 
    59046 > lighting simple
    59047 
    59048 > lighting full
    59049 
    59050 > lighting simple
    59051 
    59052 > clip list
    59053 
    59054 Using 2 clip planes: 
    59055 near offset -23.642, axis 0.032,-0.524,0.851, point 145.5,193.5,109.4) 
    59056 far offset -1.0561, axis -0.032,0.524,-0.851, point 146.2,181.7,128.6) 
    59057 
    59058 > view matrix
    59059 
    59060 view matrix camera
    59061 0.95435,0.29697,-0.031918,138.01,0.26905,-0.80839,0.52356,215.82,0.12968,-0.50826,-0.85138,91.091 
    59062 view matrix models
    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10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.3,1,0,0,0,0,1,0,0,0,0,1,0,#7,1,0,0,0,0,1,0,0,0,0,1,0 
    59064  
    59065 
    59066 > view matrix camera
    59067 > 0.95435,0.29697,-0.031918,138.01,0.26905,-0.80839,0.52356,215.82,0.12968,-0.50826,-0.85138,91.091
    59068 
    59069 > windowsize 600 600
    59070 
    59071 > hide #!1.1 models
    59072 
    59073 > hide #!1.2 models
    59074 
    59075 > show #!1.1 models
    59076 
    59077 > volume #1.1 level 0.010000
    59078 
    59079 > show #!1.2 models
    59080 
    59081 > hide #1.2
    59082 
    59083 > color #1.2/a:2249-2252 sea green
    59084 
    59085 > color #1.2/a:2058-2066 cornflower blue
    59086 
    59087 > color #1.2/a:2445-2451 light pink
    59088 
    59089 > color #1.2/a:2499-2506 green yellow
    59090 
    59091 > color #1.2/a:2449 hot pink target a
    59092 
    59093 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59094 
    59095 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59096 
    59097 > ~show #1.2
    59098 
    59099 > ~hbonds #1.2
    59100 
    59101 > name to_show
    59102 > #1.2/a:2058-2065,2250-2252,2445-2451,2499-2506/Y:73-76,101/Z:73-76,101
    59103 
    59104 > show to_show
    59105 
    59106 > ~cartoon #1.2
    59107 
    59108 > cartoon to_show
    59109 
    59110 > ~cartoon #1.2/a:830,945
    59111 
    59112 > transparency #1.2 60 target c
    59113 
    59114 > hbonds to_show & sidechain restrict both color white
    59115 
    59116 38 hydrogen bonds found 
    59117 
    59118 > color #1.2/a white target p
    59119 
    59120 > color #1.2/a:2449,2251 yellow target p
    59121 
    59122 > color #1.2/a:2449,2065 yellow target p
    59123 
    59124 > color #1.2/a:2449,2445 yellow target p
    59125 
    59126 > color #1.2/a:2449,2446 yellow target p
    59127 
    59128 > color #1.2/a:2449,2501 yellow target p
    59129 
    59130 > volume #1.1 color black transparency 0.8
    59131 
    59132 > volume zone #1.1 nearAtoms #1.2/a:2449 & sidechain range 2
    59133 
    59134 > bond #1.2/Y:76@N3':101@C
    59135 
    59136 Created 0 bonds 
    59137 
    59138 > bond #1.2/Z:76@N3':101@C
    59139 
    59140 Created 0 bonds 
    59141 
    59142 > hide #1.2/a:2553@N2|#1.2/Y:75@N3 target p
    59143 
    59144 > style #1.2/Y:101 ball
    59145 
    59146 Changed 8 atom styles 
    59147 
    59148 > style #1.2/Z:101 ball
    59149 
    59150 Changed 8 atom styles 
    59151 
    59152 > size #1.2/Y:101:76@N3' ballScale 0.10 stickRadius 0.06
    59153 
    59154 Changed 8 bond radii, 1 ball scales 
    59155 
    59156 > size #1.2/Z:101:76@N3' ballScale 0.10 stickRadius 0.06
    59157 
    59158 Changed 8 bond radii, 1 ball scales 
    59159 
    59160 > ~clip
    59161 
    59162 > clip near -18.281 far 0.66152
    59163 
    59164 > view matrix camera
    59165 > 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.63,-0.055153,0.055382,-0.99694,80.364
    59166 
    59167 > ~clip
    59168 
    59169 > clip near -18.281 far 0.66152
    59170 
    59171 > color #1.2/a:2249-2252 sea green
    59172 
    59173 > color #1.2/a:2058-2066 cornflower blue
    59174 
    59175 > color #1.2/a:2445-2451 tan
    59176 
    59177 > color #1.2/a:2499-2506 green yellow
    59178 
    59179 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59180 
    59181 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59182 
    59183 > ~show #1.2
    59184 
    59185 > ~hbonds #1.2
    59186 
    59187 > name to_show
    59188 > #1.2/a:2058-2065,2250-2252,2445-2451,2499-2506/Y:73-76,101/Z:73-76,101
    59189 
    59190 > show to_show
    59191 
    59192 > ~cartoon #1.2
    59193 
    59194 > cartoon to_show
    59195 
    59196 > ~cartoon #1.2/a:830,945
    59197 
    59198 > transparency #1.2 60 target c
    59199 
    59200 > hbonds to_show & sidechain restrict both color white
    59201 
    59202 38 hydrogen bonds found 
    59203 
    59204 > color #1.2/a white target p
    59205 
    59206 > color #1.2/a:2449,2251 yellow target p
    59207 
    59208 > color #1.2/a:2449,2065 yellow target p
    59209 
    59210 > color #1.2/a:2449,2445 yellow target p
    59211 
    59212 > color #1.2/a:2449,2446 yellow target p
    59213 
    59214 > color #1.2/a:2449,2501 yellow target p
    59215 
    59216 > color #1.2/a:2445-2451 sandy brown
    59217 
    59218 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59219 
    59220 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59221 
    59222 > color #1.2/a:2249-2252 sea green
    59223 
    59224 > color #1.2/a:2058-2066 cornflower blue
    59225 
    59226 > color #1.2/a:2445-2451 sandy brown
    59227 
    59228 > color #1.2/a:2499-2506 green yellow
    59229 
    59230 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59231 
    59232 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59233 
    59234 > color #1.2/a white target p
    59235 
    59236 > color #1.2/a:2449,2251 yellow target p
    59237 
    59238 > color #1.2/a:2449,2065 yellow target p
    59239 
    59240 > color #1.2/a:2449,2445 yellow target p
    59241 
    59242 > color #1.2/a:2449,2446 yellow target p
    59243 
    59244 > color #1.2/a:2449,2501 yellow target p
    59245 
    59246 > hide #1.2/Y:73-76,101/Z:73-76,101
    59247 
    59248 > color #1.2/a:2249-2252 sea green
    59249 
    59250 > color #1.2/a:2058-2066 cornflower blue
    59251 
    59252 > color #1.2/a:2445-2451 tan
    59253 
    59254 > color #1.2/a:2499-2506 green yellow
    59255 
    59256 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59257 
    59258 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59259 
    59260 > color #1.2/a white target p
    59261 
    59262 > color #1.2/a:2449,2251 yellow target p
    59263 
    59264 > color #1.2/a:2449,2065 yellow target p
    59265 
    59266 > color #1.2/a:2449,2445 yellow target p
    59267 
    59268 > color #1.2/a:2449,2446 yellow target p
    59269 
    59270 > color #1.2/a:2449,2501 yellow target p
    59271 
    59272 > color #1.2/a:2249-2252 sea green
    59273 
    59274 > color #1.2/a:2058-2066 cornflower blue
    59275 
    59276 > color #1.2/a:2445-2451 burly wood
    59277 
    59278 > color #1.2/a:2499-2506 green yellow
    59279 
    59280 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59281 
    59282 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59283 
    59284 > color #1.2/a white target p
    59285 
    59286 > color #1.2/a:2449,2251 yellow target p
    59287 
    59288 > color #1.2/a:2449,2065 yellow target p
    59289 
    59290 > color #1.2/a:2449,2445 yellow target p
    59291 
    59292 > color #1.2/a:2449,2446 yellow target p
    59293 
    59294 > color #1.2/a:2449,2501 yellow target p
    59295 
    59296 > color #1.2/a:2249-2252 sea green
    59297 
    59298 > color #1.2/a:2058-2066 cornflower blue
    59299 
    59300 > color #1.2/a:2445-2451 gold
    59301 
    59302 > color #1.2/a:2499-2506 green yellow
    59303 
    59304 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59305 
    59306 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59307 
    59308 > color #1.2/a white target p
    59309 
    59310 > color #1.2/a:2449,2251 slate blue target p
    59311 
    59312 > color #1.2/a:2449,2065 slate blue target p
    59313 
    59314 > color #1.2/a:2449,2445 slate blue target p
    59315 
    59316 > color #1.2/a:2449,2446 slate blue target p
    59317 
    59318 > color #1.2/a:2449,2501 slate blue target p
    59319 
    59320 > color #1.2/a:2249-2252 sea green
    59321 
    59322 > color #1.2/a:2058-2066 cornflower blue
    59323 
    59324 > color #1.2/a:2445-2451 khaki
    59325 
    59326 > color #1.2/a:2499-2506 green yellow
    59327 
    59328 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59329 
    59330 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59331 
    59332 > color #1.2/a white target p
    59333 
    59334 > color #1.2/a:2449,2251 slate blue target p
    59335 
    59336 > color #1.2/a:2449,2065 slate blue target p
    59337 
    59338 > color #1.2/a:2449,2445 slate blue target p
    59339 
    59340 > color #1.2/a:2449,2446 slate blue target p
    59341 
    59342 > color #1.2/a:2449,2501 slate blue target p
    59343 
    59344 > color #1.2/a:2249-2252 sea green
    59345 
    59346 > color #1.2/a:2058-2066 cornflower blue
    59347 
    59348 > color #1.2/a:2445-2451 navajo white
    59349 
    59350 > color #1.2/a:2499-2506 green yellow
    59351 
    59352 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59353 
    59354 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59355 
    59356 > color #1.2/a white target p
    59357 
    59358 > color #1.2/a:2449,2251 magenta target p
    59359 
    59360 > color #1.2/a:2449,2065 magenta target p
    59361 
    59362 > color #1.2/a:2449,2445 magenta target p
    59363 
    59364 > color #1.2/a:2449,2446 magenta target p
    59365 
    59366 > color #1.2/a:2449,2501 magenta target p
    59367 
    59368 > color #1.2/a:2249-2252 sea green
    59369 
    59370 > color #1.2/a:2058-2066 cornflower blue
    59371 
    59372 > color #1.2/a:2445-2451 navajo white
    59373 
    59374 > color #1.2/a:2499-2506 spring green
    59375 
    59376 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59377 
    59378 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59379 
    59380 > color #1.2/a white target p
    59381 
    59382 > color #1.2/a:2449,2251 magenta target p
    59383 
    59384 > color #1.2/a:2449,2065 magenta target p
    59385 
    59386 > color #1.2/a:2449,2445 magenta target p
    59387 
    59388 > color #1.2/a:2449,2446 magenta target p
    59389 
    59390 > color #1.2/a:2449,2501 magenta target p
    59391 
    59392 > color #1.2/a:2249-2252 sea green
    59393 
    59394 > color #1.2/a:2058-2066 cornflower blue
    59395 
    59396 > color #1.2/a:2445-2451 navajo white
    59397 
    59398 > color #1.2/a:2499-2506 spring green
    59399 
    59400 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59401 
    59402 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59403 
    59404 > color #1.2/a white target p
    59405 
    59406 > color #1.2/a:2449,2251 salmon target p
    59407 
    59408 > color #1.2/a:2449,2065 salmon target p
    59409 
    59410 > color #1.2/a:2449,2445 salmon target p
    59411 
    59412 > color #1.2/a:2449,2446 salmon target p
    59413 
    59414 > color #1.2/a:2449,2501 salmon target p
    59415 
    59416 > color #1.2/a:2249-2252 sea green
    59417 
    59418 > color #1.2/a:2058-2066 cornflower blue
    59419 
    59420 > color #1.2/a:2445-2451 navajo white
    59421 
    59422 > color #1.2/a:2499-2506 lawn green
    59423 
    59424 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59425 
    59426 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59427 
    59428 > color #1.2/a white target p
    59429 
    59430 > color #1.2/a:2449,2251 salmon target p
    59431 
    59432 > color #1.2/a:2449,2065 salmon target p
    59433 
    59434 > color #1.2/a:2449,2445 salmon target p
    59435 
    59436 > color #1.2/a:2449,2446 salmon target p
    59437 
    59438 > color #1.2/a:2449,2501 salmon target p
    59439 
    59440 > color #1.2/a:2249-2252 sea green
    59441 
    59442 > color #1.2/a:2058-2066 cornflower blue
    59443 
    59444 > color #1.2/a:2445-2451 #FFEA8D
    59445 
    59446 > color #1.2/a:2499-2506 lawn green
    59447 
    59448 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59449 
    59450 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59451 
    59452 > color #1.2/a white target p
    59453 
    59454 > color #1.2/a:2449,2251 salmon target p
    59455 
    59456 > color #1.2/a:2449,2065 salmon target p
    59457 
    59458 > color #1.2/a:2449,2445 salmon target p
    59459 
    59460 > color #1.2/a:2449,2446 salmon target p
    59461 
    59462 > color #1.2/a:2449,2501 salmon target p
    59463 
    59464 > color #1.2/a:2249-2252 sea green
    59465 
    59466 > color #1.2/a:2058-2066 cornflower blue
    59467 
    59468 > color #1.2/a:2445-2451 #FFD856
    59469 
    59470 > color #1.2/a:2499-2506 lawn green
    59471 
    59472 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59473 
    59474 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59475 
    59476 > color #1.2/a white target p
    59477 
    59478 > color #1.2/a:2449,2251 salmon target p
    59479 
    59480 > color #1.2/a:2449,2065 salmon target p
    59481 
    59482 > color #1.2/a:2449,2445 salmon target p
    59483 
    59484 > color #1.2/a:2449,2446 salmon target p
    59485 
    59486 > color #1.2/a:2449,2501 salmon target p
    59487 
    59488 > color #1.2/a:2249-2252 sea green
    59489 
    59490 > color #1.2/a:2058-2066 cornflower blue
    59491 
    59492 > color #1.2/a:2445-2451 #FFDB66
    59493 
    59494 > color #1.2/a:2499-2506 lawn green
    59495 
    59496 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59497 
    59498 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59499 
    59500 > color #1.2/a white target p
    59501 
    59502 > color #1.2/a:2449,2251 salmon target p
    59503 
    59504 > color #1.2/a:2449,2065 salmon target p
    59505 
    59506 > color #1.2/a:2449,2445 salmon target p
    59507 
    59508 > color #1.2/a:2449,2446 salmon target p
    59509 
    59510 > color #1.2/a:2449,2501 salmon target p
    59511 
    59512 > color #1.2/a:2449,2251 cyan target p
    59513 
    59514 > color #1.2/a:2449,2065 cyan target p
    59515 
    59516 > color #1.2/a:2449,2445 cyan target p
    59517 
    59518 > color #1.2/a:2449,2446 cyan target p
    59519 
    59520 > color #1.2/a:2449,2501 cyan target p
    59521 
    59522 > color #1.2/a spring green target p
    59523 
    59524 > color #1.2/a white target p
    59525 
    59526 > color #1.2/a:2449,2251 spring green target p
    59527 
    59528 > color #1.2/a:2449,2065 spring green target p
    59529 
    59530 > color #1.2/a:2449,2445 spring green target p
    59531 
    59532 > color #1.2/a:2449,2446 spring green target p
    59533 
    59534 > color #1.2/a:2449,2501 spring green target p
    59535 
    59536 > windowsize 600 600
    59537 
    59538 > show #!1.1 models
    59539 
    59540 > volume #1.1 level 0.010000
    59541 
    59542 > show #!1.2 models
    59543 
    59544 > hide #1.2
    59545 
    59546 > color #1.2/a:2249-2252 sea green
    59547 
    59548 > color #1.2/a:2058-2066 cornflower blue
    59549 
    59550 > color #1.2/a:2445-2451 #FFDB66
    59551 
    59552 > color #1.2/a:2499-2506 lawn green
    59553 
    59554 > color #1.2/a:2449 hot pink target a
    59555 
    59556 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59557 
    59558 > color #1.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59559 
    59560 > ~show #1.2
    59561 
    59562 > ~hbonds #1.2
    59563 
    59564 > name to_show #1.2/a:2058-2065,2250-2252,2445-2451,2499-2506
    59565 
    59566 > show to_show
    59567 
    59568 > ~cartoon #1.2
    59569 
    59570 > cartoon to_show
    59571 
    59572 > transparency #1.2 60 target c
    59573 
    59574 > hbonds to_show & sidechain restrict both color white
    59575 
    59576 24 hydrogen bonds found 
    59577 
    59578 > color #1.2/a white target p
    59579 
    59580 > color #1.2/a:2449,2251 spring green target p
    59581 
    59582 > color #1.2/a:2449,2065 spring green target p
    59583 
    59584 > color #1.2/a:2449,2445 spring green target p
    59585 
    59586 > color #1.2/a:2449,2446 spring green target p
    59587 
    59588 > color #1.2/a:2449,2501 spring green target p
    59589 
    59590 > volume #1.1 color black transparency 0.8
    59591 
    59592 > volume zone #1.1 nearAtoms #1.2/a:2449 & sidechain range 2
    59593 
    59594 > save /Users/dalar193/Desktop/D2449_new/D2449_new_8emm_map.png height 600
    59595 > width 600 supersample 3
    59596 
    59597 > hide #!1.1 models
    59598 
    59599 > hide #!1.2 models
    59600 
    59601 > ç√
    59602 
    59603 Unknown command: ç√ 
    59604 
    59605 > show #!1.6 models
    59606 
    59607 > volume #1.6 level 0.006500
    59608 
    59609 > show #!1.7 models
    59610 
    59611 > hide #1.7
    59612 
    59613 > color #1.7/a:2249-2252 sea green
    59614 
    59615 > color #1.7/a:2058-2066 cornflower blue
    59616 
    59617 > color #1.7/a:2445-2451 #FFDB66
    59618 
    59619 > color #1.7/a:2499-2506 lawn green
    59620 
    59621 > color #1.7/a:2449 hot pink target a
    59622 
    59623 > color #1.7/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59624 
    59625 > color #1.7/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59626 
    59627 > ~show #1.7
    59628 
    59629 > ~hbonds #1.7
    59630 
    59631 > name to_show #1.7/a:2058-2065,2250-2252,2445-2451,2499-2506
    59632 
    59633 > show to_show
    59634 
    59635 > ~cartoon #1.7
    59636 
    59637 > cartoon to_show
    59638 
    59639 > transparency #1.7 60 target c
    59640 
    59641 > hbonds to_show & sidechain restrict both color white
    59642 
    59643 26 hydrogen bonds found 
    59644 
    59645 > color #1.7/a white target p
    59646 
    59647 > color #1.7/a:2449,2251 spring green target p
    59648 
    59649 > color #1.7/a:2449,2065 spring green target p
    59650 
    59651 > color #1.7/a:2449,2445 spring green target p
    59652 
    59653 > color #1.7/a:2449,2446 spring green target p
    59654 
    59655 > color #1.7/a:2449,2501 spring green target p
    59656 
    59657 > volume #1.6 color black transparency 0.8
    59658 
    59659 > volume zone #1.6 nearAtoms #1.7/a:2449 & sidechain range 2
    59660 
    59661 > save /Users/dalar193/Desktop/D2449_new/D2449_new_8cgk_map.png height 600
    59662 > width 600 supersample 3
    59663 
    59664 > hide #!1.6 models
    59665 
    59666 > hide #!1.7 models
    59667 
    59668 > show #!2.2 models
    59669 
    59670 > volume #2.2 level 0.013000
    59671 
    59672 > show #!6.2 models
    59673 
    59674 > hide #6.2
    59675 
    59676 > color #6.2/a:2249-2252 sea green
    59677 
    59678 > color #6.2/a:2058-2066 cornflower blue
    59679 
    59680 > color #6.2/a:2445-2451 #FFDB66
    59681 
    59682 > color #6.2/a:2499-2506 lawn green
    59683 
    59684 > color #6.2/a:2449 hot pink target a
    59685 
    59686 > color #6.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59687 
    59688 > color #6.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59689 
    59690 > ~show #6.2
    59691 
    59692 > ~hbonds #6.2
    59693 
    59694 > name to_show #6.2/a:2058-2065,2250-2252,2445-2451,2499-2506
    59695 
    59696 > show to_show
    59697 
    59698 > ~cartoon #6.2
    59699 
    59700 > cartoon to_show
    59701 
    59702 > transparency #6.2 60 target c
    59703 
    59704 > hbonds to_show & sidechain restrict both color white
    59705 
    59706 24 hydrogen bonds found 
    59707 
    59708 > color #6.2/a white target p
    59709 
    59710 > color #6.2/a:2449,2251 spring green target p
    59711 
    59712 > color #6.2/a:2449,2065 spring green target p
    59713 
    59714 > color #6.2/a:2449,2445 spring green target p
    59715 
    59716 > color #6.2/a:2449,2446 spring green target p
    59717 
    59718 > color #6.2/a:2449,2501 spring green target p
    59719 
    59720 > volume #2.2 color black transparency 0.8
    59721 
    59722 > volume zone #2.2 nearAtoms #6.2/a:2449 & sidechain range 2
    59723 
    59724 > show #!6.6 models
    59725 
    59726 > ~show #6.6
    59727 
    59728 > ~cartoon #6.6
    59729 
    59730 > volume zone #2.2 nearAtoms (#6.2/a:2449 | #6.6/a:2449 ) & sidechain range 2
    59731 
    59732 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_ape1.png height 600
    59733 > width 600 supersample 3
    59734 
    59735 > view matrix camera
    59736 > 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.63,-0.055153,0.055382,-0.99694,80.364
    59737 
    59738 > ui tool show "Model Panel"
    59739 
    59740 > hide #!2.2 models
    59741 
    59742 > hide #!6.2 models
    59743 
    59744 > hide #!6.6 models
    59745 
    59746 > show #!4.10 models
    59747 
    59748 > volume #4.10 level 0.400000
    59749 
    59750 > show #!6.10 models
    59751 
    59752 > hide #6.10
    59753 
    59754 > color #6.10/a:2249-2252 sea green
    59755 
    59756 > color #6.10/a:2058-2066 cornflower blue
    59757 
    59758 > color #6.10/a:2445-2451 #FFDB66
    59759 
    59760 > color #6.10/a:2499-2506 lawn green
    59761 
    59762 > color #6.10/a:2449 hot pink target a
    59763 
    59764 > color #6.10/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    59765 > a
    59766 
    59767 > color #6.10/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59768 
    59769 > ~show #6.10
    59770 
    59771 > ~hbonds #6.10
    59772 
    59773 > name to_show #6.10/a:2058-2065,2250-2252,2445-2451,2499-2506
    59774 
    59775 > show to_show
    59776 
    59777 > ~cartoon #6.10
    59778 
    59779 > cartoon to_show
    59780 
    59781 > transparency #6.10 60 target c
    59782 
    59783 > hbonds to_show & sidechain restrict both color white
    59784 
    59785 29 hydrogen bonds found 
    59786 
    59787 > color #6.10/a white target p
    59788 
    59789 > color #6.10/a:2449,2251 spring green target p
    59790 
    59791 > color #6.10/a:2449,2065 spring green target p
    59792 
    59793 > color #6.10/a:2449,2445 spring green target p
    59794 
    59795 > color #6.10/a:2449,2446 spring green target p
    59796 
    59797 > color #6.10/a:2449,2501 spring green target p
    59798 
    59799 > volume #4.10 color black transparency 0.8
    59800 
    59801 > volume zone #4.10 nearAtoms #6.10/a:2449 & sidechain range 2
    59802 
    59803 > show #!6.6 models
    59804 
    59805 > ~show #6.6
    59806 
    59807 > ~cartoon #6.6
    59808 
    59809 > volume zone #4.10 nearAtoms (#6.10/a:2449 | #6.6/a:2449 ) & sidechain range 2
    59810 
    59811 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_J83_cl0.png height 600
    59812 > width 600 supersample 3
    59813 
    59814 > view matrix camera
    59815 > 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.63,-0.055153,0.055382,-0.99694,80.364
    59816 
    59817 > hide #!4.10 models
    59818 
    59819 > hide #!6.10 models
    59820 
    59821 > hide #!6.6 models
    59822 
    59823 > show #!4.10 models
    59824 
    59825 > volume #4.10 level 0.400000
    59826 
    59827 > show #!6.10 models
    59828 
    59829 > hide #6.10
    59830 
    59831 > color #6.10/a:2249-2252 sea green
    59832 
    59833 > color #6.10/a:2058-2066 cornflower blue
    59834 
    59835 > color #6.10/a:2445-2451 #FFDB66
    59836 
    59837 > color #6.10/a:2499-2506 lawn green
    59838 
    59839 > color #6.10/a:2449 hot pink target a
    59840 
    59841 > color #6.10/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    59842 > a
    59843 
    59844 > color #6.10/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59845 
    59846 > ~show #6.10
    59847 
    59848 > ~hbonds #6.10
    59849 
    59850 > name to_show #6.10/a:2058-2065,2250-2252,2445-2451,2499-2506
    59851 
    59852 > show to_show
    59853 
    59854 > ~cartoon #6.10
    59855 
    59856 > cartoon to_show
    59857 
    59858 > transparency #6.10 60 target c
    59859 
    59860 > hbonds to_show & sidechain restrict both color white
    59861 
    59862 29 hydrogen bonds found 
    59863 
    59864 > color #6.10/a white target p
    59865 
    59866 > color #6.10/a:2449,2251 spring green target p
    59867 
    59868 > color #6.10/a:2449,2065 spring green target p
    59869 
    59870 > color #6.10/a:2449,2445 spring green target p
    59871 
    59872 > color #6.10/a:2449,2446 spring green target p
    59873 
    59874 > color #6.10/a:2449,2501 spring green target p
    59875 
    59876 > volume #4.10 color black transparency 0.8
    59877 
    59878 > volume zone #4.10 nearAtoms #6.10/a:2449 & sidechain range 2
    59879 
    59880 > show #!6.6 models
    59881 
    59882 > ~show #6.6
    59883 
    59884 > ~cartoon #6.6
    59885 
    59886 > show #6.6/a:2449
    59887 
    59888 > color #6.6/a:2449 white
    59889 
    59890 > volume zone #4.10 nearAtoms (#6.10/a:2449 | #6.6/a:2449 ) & sidechain range 2
    59891 
    59892 > color #6.6/a:2449 hot pink target a
    59893 
    59894 > color #6.6/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59895 
    59896 > color #6.6/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59897 
    59898 > view matrix camera
    59899 > 0.99651,0.065722,-0.051478,135.55,0.06267,-0.9963,-0.058813,192.63,-0.055153,0.055382,-0.99694,80.364
    59900 
    59901 > show #!4.10 models
    59902 
    59903 > volume #4.10 level 0.400000
    59904 
    59905 > show #!6.10 models
    59906 
    59907 > hide #6.10
    59908 
    59909 > color #6.10/a:2249-2252 sea green
    59910 
    59911 > color #6.10/a:2058-2066 cornflower blue
    59912 
    59913 > color #6.10/a:2445-2451 #FFDB66
    59914 
    59915 > color #6.10/a:2499-2506 lawn green
    59916 
    59917 > color #6.10/a:2449 hot pink target a
    59918 
    59919 > color #6.10/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    59920 > a
    59921 
    59922 > color #6.10/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59923 
    59924 > ~show #6.10
    59925 
    59926 > ~hbonds #6.10
    59927 
    59928 > name to_show #6.10/a:2058-2065,2250-2252,2445-2451,2499-2506
    59929 
    59930 > show to_show
    59931 
    59932 > ~cartoon #6.10
    59933 
    59934 > cartoon to_show
    59935 
    59936 > transparency #6.10 60 target c
    59937 
    59938 > hbonds to_show & sidechain restrict both color white
    59939 
    59940 29 hydrogen bonds found 
    59941 
    59942 > color #6.10/a white target p
    59943 
    59944 > color #6.10/a:2449,2251 spring green target p
    59945 
    59946 > color #6.10/a:2449,2065 spring green target p
    59947 
    59948 > color #6.10/a:2449,2445 spring green target p
    59949 
    59950 > color #6.10/a:2449,2446 spring green target p
    59951 
    59952 > color #6.10/a:2449,2501 spring green target p
    59953 
    59954 > volume #4.10 color black transparency 0.8
    59955 
    59956 > volume zone #4.10 nearAtoms #6.10/a:2449 & sidechain range 2
    59957 
    59958 > show #!6.6 models
    59959 
    59960 > ~show #6.6
    59961 
    59962 > ~cartoon #6.6
    59963 
    59964 > show #6.6/a:2449
    59965 
    59966 > volume zone #4.10 nearAtoms (#6.10/a:2449 | #6.6/a:2449 ) & sidechain range 2
    59967 
    59968 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_J83_cl0.png height 600
    59969 > width 600 supersample 3
    59970 
    59971 > hide #!4.10 models
    59972 
    59973 > hide #!6.10 models
    59974 
    59975 > hide #!6.6 models
    59976 
    59977 > show #!4.1 models
    59978 
    59979 > volume #4.1 level 0.400000
    59980 
    59981 > show #!6.1 models
    59982 
    59983 > hide #6.1
    59984 
    59985 > color #6.1/a:2249-2252 sea green
    59986 
    59987 > color #6.1/a:2058-2066 cornflower blue
    59988 
    59989 > color #6.1/a:2445-2451 #FFDB66
    59990 
    59991 > color #6.1/a:2499-2506 lawn green
    59992 
    59993 > color #6.1/a:2449 hot pink target a
    59994 
    59995 > color #6.1/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    59996 
    59997 > color #6.1/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    59998 
    59999 > ~show #6.1
    60000 
    60001 > ~hbonds #6.1
    60002 
    60003 > name to_show #6.1/a:2058-2065,2250-2252,2445-2451,2499-2506
    60004 
    60005 > show to_show
    60006 
    60007 > ~cartoon #6.1
    60008 
    60009 > cartoon to_show
    60010 
    60011 > transparency #6.1 60 target c
    60012 
    60013 > hbonds to_show & sidechain restrict both color white
    60014 
    60015 20 hydrogen bonds found 
    60016 
    60017 > color #6.1/a white target p
    60018 
    60019 > color #6.1/a:2449,2251 spring green target p
    60020 
    60021 > color #6.1/a:2449,2065 spring green target p
    60022 
    60023 > color #6.1/a:2449,2445 spring green target p
    60024 
    60025 > color #6.1/a:2449,2446 spring green target p
    60026 
    60027 > color #6.1/a:2449,2501 spring green target p
    60028 
    60029 > volume #4.1 color black transparency 0.8
    60030 
    60031 > volume zone #4.1 nearAtoms #6.1/a:2449 & sidechain range 2
    60032 
    60033 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_J84_cl1.png height 600
    60034 > width 600 supersample 3
    60035 
    60036 > hide #!4.1 models
    60037 
    60038 > hide #!6.1 models
    60039 
    60040 > show #!4.2 models
    60041 
    60042 > volume #4.2 level 0.400000
    60043 
    60044 > show #!6.2 models
    60045 
    60046 > hide #6.2
    60047 
    60048 > color #6.2/a:2249-2252 sea green
    60049 
    60050 > color #6.2/a:2058-2066 cornflower blue
    60051 
    60052 > color #6.2/a:2445-2451 #FFDB66
    60053 
    60054 > color #6.2/a:2499-2506 lawn green
    60055 
    60056 > color #6.2/a:2449 hot pink target a
    60057 
    60058 > color #6.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    60059 
    60060 > color #6.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    60061 
    60062 > ~show #6.2
    60063 
    60064 > ~hbonds #6.2
    60065 
    60066 > name to_show #6.2/a:2058-2065,2250-2252,2445-2451,2499-2506
    60067 
    60068 > show to_show
    60069 
    60070 > ~cartoon #6.2
    60071 
    60072 > cartoon to_show
    60073 
    60074 > transparency #6.2 60 target c
    60075 
    60076 > hbonds to_show & sidechain restrict both color white
    60077 
    60078 24 hydrogen bonds found 
    60079 
    60080 > color #6.2/a white target p
    60081 
    60082 > color #6.2/a:2449,2251 spring green target p
    60083 
    60084 > color #6.2/a:2449,2065 spring green target p
    60085 
    60086 > color #6.2/a:2449,2445 spring green target p
    60087 
    60088 > color #6.2/a:2449,2446 spring green target p
    60089 
    60090 > color #6.2/a:2449,2501 spring green target p
    60091 
    60092 > volume #4.2 color black transparency 0.8
    60093 
    60094 > volume zone #4.2 nearAtoms #6.2/a:2449 & sidechain range 2
    60095 
    60096 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_J85_cl2.png height 600
    60097 > width 600 supersample 3
    60098 
    60099 > hide #!4.2 models
    60100 
    60101 > hide #!6.2 models
    60102 
    60103 > show #!4.3 models
    60104 
    60105 > volume #4.3 level 0.400000
    60106 
    60107 > show #!6.3 models
    60108 
    60109 > hide #6.3
    60110 
    60111 > color #6.3/a:2249-2252 sea green
    60112 
    60113 > color #6.3/a:2058-2066 cornflower blue
    60114 
    60115 > color #6.3/a:2445-2451 #FFDB66
    60116 
    60117 > color #6.3/a:2499-2506 lawn green
    60118 
    60119 > color #6.3/a:2449 hot pink target a
    60120 
    60121 > color #6.3/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    60122 
    60123 > color #6.3/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    60124 
    60125 > ~show #6.3
    60126 
    60127 > ~hbonds #6.3
    60128 
    60129 > name to_show #6.3/a:2058-2065,2250-2252,2445-2451,2499-2506
    60130 
    60131 > show to_show
    60132 
    60133 > ~cartoon #6.3
    60134 
    60135 > cartoon to_show
    60136 
    60137 > transparency #6.3 60 target c
    60138 
    60139 > hbonds to_show & sidechain restrict both color white
    60140 
    60141 23 hydrogen bonds found 
    60142 
    60143 > color #6.3/a white target p
    60144 
    60145 > color #6.3/a:2449,2251 spring green target p
    60146 
    60147 > color #6.3/a:2449,2065 spring green target p
    60148 
    60149 > color #6.3/a:2449,2445 spring green target p
    60150 
    60151 > color #6.3/a:2449,2446 spring green target p
    60152 
    60153 > color #6.3/a:2449,2501 spring green target p
    60154 
    60155 > volume #4.3 color black transparency 0.8
    60156 
    60157 > volume zone #4.3 nearAtoms #6.3/a:2449 & sidechain range 2
    60158 
    60159 > show #!6.6 models
    60160 
    60161 > ~show #6.6
    60162 
    60163 > ~cartoon #6.6
    60164 
    60165 > show #6.6/a:2449
    60166 
    60167 > volume zone #4.3 nearAtoms (#6.3/a:2449 | #6.6/a:2449 ) & sidechain range 2
    60168 
    60169 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_J86_cl3.png height 600
    60170 > width 600 supersample 3
    60171 
    60172 > hide #!4.3 models
    60173 
    60174 > hide #!6.3 models
    60175 
    60176 > hide #!6.6 models
    60177 
    60178 > show #!4.4 models
    60179 
    60180 > volume #4.4 level 0.400000
    60181 
    60182 > show #!6.4 models
    60183 
    60184 > hide #6.4
    60185 
    60186 > color #6.4/a:2249-2252 sea green
    60187 
    60188 > color #6.4/a:2058-2066 cornflower blue
    60189 
    60190 > color #6.4/a:2445-2451 #FFDB66
    60191 
    60192 > color #6.4/a:2499-2506 lawn green
    60193 
    60194 > color #6.4/a:2449 hot pink target a
    60195 
    60196 > color #6.4/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    60197 
    60198 > color #6.4/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    60199 
    60200 > ~show #6.4
    60201 
    60202 > ~hbonds #6.4
    60203 
    60204 > name to_show #6.4/a:2058-2065,2250-2252,2445-2451,2499-2506
    60205 
    60206 > show to_show
    60207 
    60208 > ~cartoon #6.4
    60209 
    60210 > cartoon to_show
    60211 
    60212 > transparency #6.4 60 target c
    60213 
    60214 > hbonds to_show & sidechain restrict both color white
    60215 
    60216 29 hydrogen bonds found 
    60217 
    60218 > color #6.4/a white target p
    60219 
    60220 > color #6.4/a:2449,2251 spring green target p
    60221 
    60222 > color #6.4/a:2449,2065 spring green target p
    60223 
    60224 > color #6.4/a:2449,2445 spring green target p
    60225 
    60226 > color #6.4/a:2449,2446 spring green target p
    60227 
    60228 > color #6.4/a:2449,2501 spring green target p
    60229 
    60230 > volume #4.4 color black transparency 0.8
    60231 
    60232 > volume zone #4.4 nearAtoms #6.4/a:2449 & sidechain range 2
    60233 
    60234 > show #!6.2 models
    60235 
    60236 > ~show #6.2
    60237 
    60238 > ~cartoon #6.2
    60239 
    60240 > show #6.2/a:2449
    60241 
    60242 > volume zone #4.4 nearAtoms (#6.4/a:2449 | #6.2/a:2449 ) & sidechain range 2
    60243 
    60244 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_J87_cl4.png height 600
    60245 > width 600 supersample 3
    60246 
    60247 > hide #!4.4 models
    60248 
    60249 > hide #!6.4 models
    60250 
    60251 > hide #!6.2 models
    60252 
    60253 > show #!4.5 models
    60254 
    60255 > volume #4.5 level 0.300000
    60256 
    60257 > show #!6.5 models
    60258 
    60259 > hide #6.5
    60260 
    60261 > color #6.5/a:2249-2252 sea green
    60262 
    60263 > color #6.5/a:2058-2066 cornflower blue
    60264 
    60265 > color #6.5/a:2445-2451 #FFDB66
    60266 
    60267 > color #6.5/a:2499-2506 lawn green
    60268 
    60269 > color #6.5/a:2449 hot pink target a
    60270 
    60271 > color #6.5/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    60272 
    60273 > color #6.5/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    60274 
    60275 > ~show #6.5
    60276 
    60277 > ~hbonds #6.5
    60278 
    60279 > name to_show #6.5/a:2058-2065,2250-2252,2445-2451,2499-2506
    60280 
    60281 > show to_show
    60282 
    60283 > ~cartoon #6.5
    60284 
    60285 > cartoon to_show
    60286 
    60287 > transparency #6.5 60 target c
    60288 
    60289 > hbonds to_show & sidechain restrict both color white
    60290 
    60291 24 hydrogen bonds found 
    60292 
    60293 > color #6.5/a white target p
    60294 
    60295 > color #6.5/a:2449,2251 spring green target p
    60296 
    60297 > color #6.5/a:2449,2065 spring green target p
    60298 
    60299 > color #6.5/a:2449,2445 spring green target p
    60300 
    60301 > color #6.5/a:2449,2446 spring green target p
    60302 
    60303 > color #6.5/a:2449,2501 spring green target p
    60304 
    60305 > volume #4.5 color black transparency 0.8
    60306 
    60307 > volume zone #4.5 nearAtoms #6.5/a:2449 & sidechain range 2
    60308 
    60309 > show #!6.2 models
    60310 
    60311 > ~show #6.2
    60312 
    60313 > ~cartoon #6.2
    60314 
    60315 > show #6.2/a:2449
    60316 
    60317 > volume zone #4.5 nearAtoms (#6.5/a:2449 | #6.2/a:2449 ) & sidechain range 2
    60318 
    60319 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_J88_cl5.png height 600
    60320 > width 600 supersample 3
    60321 
    60322 > hide #!4.5 models
    60323 
    60324 > hide #!6.5 models
    60325 
    60326 > hide #!6.2 models
    60327 
    60328 > show #!4.6 models
    60329 
    60330 > volume #4.6 level 0.400000
    60331 
    60332 > show #!6.6 models
    60333 
    60334 > hide #6.6
    60335 
    60336 > color #6.6/a:2249-2252 sea green
    60337 
    60338 > color #6.6/a:2058-2066 cornflower blue
    60339 
    60340 > color #6.6/a:2445-2451 #FFDB66
    60341 
    60342 > color #6.6/a:2499-2506 lawn green
    60343 
    60344 > color #6.6/a:2449 hot pink target a
    60345 
    60346 > color #6.6/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    60347 
    60348 > color #6.6/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    60349 
    60350 > ~show #6.6
    60351 
    60352 > ~hbonds #6.6
    60353 
    60354 > name to_show #6.6/a:2058-2065,2250-2252,2445-2451,2499-2506
    60355 
    60356 > show to_show
    60357 
    60358 > ~cartoon #6.6
    60359 
    60360 > cartoon to_show
    60361 
    60362 > transparency #6.6 60 target c
    60363 
    60364 > hbonds to_show & sidechain restrict both color white
    60365 
    60366 30 hydrogen bonds found 
    60367 
    60368 > color #6.6/a white target p
    60369 
    60370 > color #6.6/a:2449,2251 spring green target p
    60371 
    60372 > color #6.6/a:2449,2065 spring green target p
    60373 
    60374 > color #6.6/a:2449,2445 spring green target p
    60375 
    60376 > color #6.6/a:2449,2446 spring green target p
    60377 
    60378 > color #6.6/a:2449,2501 spring green target p
    60379 
    60380 > volume #4.6 color black transparency 0.8
    60381 
    60382 > volume zone #4.6 nearAtoms #6.6/a:2449 & sidechain range 2
    60383 
    60384 > ~show #6.6/a:2059-2060
    60385 
    60386 > show #!6.2 models
    60387 
    60388 > ~show #6.2
    60389 
    60390 > ~cartoon #6.2
    60391 
    60392 > show #6.2/a:2449
    60393 
    60394 > volume zone #4.6 nearAtoms (#6.6/a:2449 | #6.2/a:2449 ) & sidechain range 2
    60395 
    60396 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_J89_cl6.png height 600
    60397 > width 600 supersample 3
    60398 
    60399 > hide #!4.6 models
    60400 
    60401 > hide #!6.6 models
    60402 
    60403 > hide #!6.2 models
    60404 
    60405 > show #!4.7 models
    60406 
    60407 > volume #4.7 level 0.400000
    60408 
    60409 > show #!6.7 models
    60410 
    60411 > hide #6.7
    60412 
    60413 > color #6.7/a:2249-2252 sea green
    60414 
    60415 > color #6.7/a:2058-2066 cornflower blue
    60416 
    60417 > color #6.7/a:2445-2451 #FFDB66
    60418 
    60419 > color #6.7/a:2499-2506 lawn green
    60420 
    60421 > color #6.7/a:2449 hot pink target a
    60422 
    60423 > color #6.7/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    60424 
    60425 > color #6.7/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    60426 
    60427 > ~show #6.7
    60428 
    60429 > ~hbonds #6.7
    60430 
    60431 > name to_show #6.7/a:2058-2065,2250-2252,2445-2451,2499-2506
    60432 
    60433 > show to_show
    60434 
    60435 > ~cartoon #6.7
    60436 
    60437 > cartoon to_show
    60438 
    60439 > transparency #6.7 60 target c
    60440 
    60441 > hbonds to_show & sidechain restrict both color white
    60442 
    60443 22 hydrogen bonds found 
    60444 
    60445 > color #6.7/a white target p
    60446 
    60447 > color #6.7/a:2449,2251 spring green target p
    60448 
    60449 > color #6.7/a:2449,2065 spring green target p
    60450 
    60451 > color #6.7/a:2449,2445 spring green target p
    60452 
    60453 > color #6.7/a:2449,2446 spring green target p
    60454 
    60455 > color #6.7/a:2449,2501 spring green target p
    60456 
    60457 > volume #4.7 color black transparency 0.8
    60458 
    60459 > volume zone #4.7 nearAtoms #6.7/a:2449 & sidechain range 2
    60460 
    60461 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_J90_cl7.png height 600
    60462 > width 600 supersample 3
    60463 
    60464 > hide #!4.7 models
    60465 
    60466 > hide #!6.7 models
    60467 
    60468 > show #!4.8 models
    60469 
    60470 > volume #4.8 level 0.400000
    60471 
    60472 > show #!6.8 models
    60473 
    60474 > hide #6.8
    60475 
    60476 > color #6.8/a:2249-2252 sea green
    60477 
    60478 > color #6.8/a:2058-2066 cornflower blue
    60479 
    60480 > color #6.8/a:2445-2451 #FFDB66
    60481 
    60482 > color #6.8/a:2499-2506 lawn green
    60483 
    60484 > color #6.8/a:2449 hot pink target a
    60485 
    60486 > color #6.8/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    60487 
    60488 > color #6.8/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    60489 
    60490 > ~show #6.8
    60491 
    60492 > ~hbonds #6.8
    60493 
    60494 > name to_show #6.8/a:2058-2065,2250-2252,2445-2451,2499-2506
    60495 
    60496 > show to_show
    60497 
    60498 > ~cartoon #6.8
    60499 
    60500 > cartoon to_show
    60501 
    60502 > transparency #6.8 60 target c
    60503 
    60504 > hbonds to_show & sidechain restrict both color white
    60505 
    60506 28 hydrogen bonds found 
    60507 
    60508 > color #6.8/a white target p
    60509 
    60510 > color #6.8/a:2449,2251 spring green target p
    60511 
    60512 > color #6.8/a:2449,2065 spring green target p
    60513 
    60514 > color #6.8/a:2449,2445 spring green target p
    60515 
    60516 > color #6.8/a:2449,2446 spring green target p
    60517 
    60518 > color #6.8/a:2449,2501 spring green target p
    60519 
    60520 > volume #4.8 color black transparency 0.8
    60521 
    60522 > volume zone #4.8 nearAtoms #6.8/a:2449 & sidechain range 2
    60523 
    60524 > show #!6.2 models
    60525 
    60526 > ~show #6.2
    60527 
    60528 > ~cartoon #6.2
    60529 
    60530 > show #6.2/a:2449
    60531 
    60532 > volume zone #4.8 nearAtoms (#6.8/a:2449 | #6.2/a:2449 ) & sidechain range 2
    60533 
    60534 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_J91_cl8.png height 600
    60535 > width 600 supersample 3
    60536 
    60537 > hide #!4.8 models
    60538 
    60539 > hide #!6.8 models
    60540 
    60541 > hide #!6.2 models
    60542 
    60543 > show #!4.9 models
    60544 
    60545 > volume #4.9 level 0.400000
    60546 
    60547 > show #!6.9 models
    60548 
    60549 > hide #6.9
    60550 
    60551 > color #6.9/a:2249-2252 sea green
    60552 
    60553 > color #6.9/a:2058-2066 cornflower blue
    60554 
    60555 > color #6.9/a:2445-2451 #FFDB66
    60556 
    60557 > color #6.9/a:2499-2506 lawn green
    60558 
    60559 > color #6.9/a:2449 hot pink target a
    60560 
    60561 > color #6.9/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    60562 
    60563 > color #6.9/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    60564 
    60565 > ~show #6.9
    60566 
    60567 > ~hbonds #6.9
    60568 
    60569 > name to_show #6.9/a:2058-2065,2250-2252,2445-2451,2499-2506
    60570 
    60571 > show to_show
    60572 
    60573 > ~cartoon #6.9
    60574 
    60575 > cartoon to_show
    60576 
    60577 > transparency #6.9 60 target c
    60578 
    60579 > hbonds to_show & sidechain restrict both color white
    60580 
    60581 26 hydrogen bonds found 
    60582 
    60583 > color #6.9/a white target p
    60584 
    60585 > color #6.9/a:2449,2251 spring green target p
    60586 
    60587 > color #6.9/a:2449,2065 spring green target p
    60588 
    60589 > color #6.9/a:2449,2445 spring green target p
    60590 
    60591 > color #6.9/a:2449,2446 spring green target p
    60592 
    60593 > color #6.9/a:2449,2501 spring green target p
    60594 
    60595 > volume #4.9 color black transparency 0.8
    60596 
    60597 > volume zone #4.9 nearAtoms #6.9/a:2449 & sidechain range 2
    60598 
    60599 > show #!6.6 models
    60600 
    60601 > ~show #6.6
    60602 
    60603 > ~cartoon #6.6
    60604 
    60605 > show #6.6/a:2449
    60606 
    60607 > volume zone #4.9 nearAtoms (#6.9/a:2449 | #6.6/a:2449 ) & sidechain range 2
    60608 
    60609 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_J92_cl9.png height 600
    60610 > width 600 supersample 3
    60611 
    60612 > hide #!4.9 models
    60613 
    60614 > hide #!6.9 models
    60615 
    60616 > hide #!6.6 models
    60617 
    60618 > show #!2.2 models
    60619 
    60620 > volume #2.2 level 0.013000
    60621 
    60622 > show #!6.2 models
    60623 
    60624 > hide #6.2
    60625 
    60626 > color #6.2/a:2249-2252 sea green
    60627 
    60628 > color #6.2/a:2058-2066 cornflower blue
    60629 
    60630 > color #6.2/a:2445-2451 #FFDB66
    60631 
    60632 > color #6.2/a:2499-2506 lawn green
    60633 
    60634 > color #6.2/a:2449 hot pink target a
    60635 
    60636 > color #6.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    60637 
    60638 > color #6.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    60639 
    60640 > ~show #6.2
    60641 
    60642 > ~hbonds #6.2
    60643 
    60644 > name to_show #6.2/a:2058-2065,2250-2252,2445-2451,2499-2506
    60645 
    60646 > show to_show
    60647 
    60648 > ~cartoon #6.2
    60649 
    60650 > cartoon to_show
    60651 
    60652 > transparency #6.2 60 target c
    60653 
    60654 > hbonds to_show & sidechain restrict both color white
    60655 
    60656 24 hydrogen bonds found 
    60657 
    60658 > color #6.2/a white target p
    60659 
    60660 > color #6.2/a:2449,2251 spring green target p
    60661 
    60662 > color #6.2/a:2449,2065 spring green target p
    60663 
    60664 > color #6.2/a:2449,2445 spring green target p
    60665 
    60666 > color #6.2/a:2449,2446 spring green target p
    60667 
    60668 > color #6.2/a:2449,2501 spring green target p
    60669 
    60670 > volume #2.2 color black transparency 0.8
    60671 
    60672 > volume zone #2.2 nearAtoms #6.2/a:2449 & sidechain range 2
    60673 
    60674 > show #!6.6 models
    60675 
    60676 > ~show #6.6
    60677 
    60678 > ~cartoon #6.6
    60679 
    60680 > show #6.6/a:2449
    60681 
    60682 > volume zone #2.2 nearAtoms (#6.2/a:2449 | #6.6/a:2449 ) & sidechain range 2
    60683 
    60684 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_ape1.png height 600
    60685 > width 600 supersample 3
    60686 
    60687 > hide #!2.2 models
    60688 
    60689 > hide #!6.2 models
    60690 
    60691 > hide #!6.6 models
    60692 
    60693 > show #!2.3 models
    60694 
    60695 > volume #2.3 level 0.013000
    60696 
    60697 > show #!6.6 models
    60698 
    60699 > hide #6.6
    60700 
    60701 > color #6.6/a:2249-2252 sea green
    60702 
    60703 > color #6.6/a:2058-2066 cornflower blue
    60704 
    60705 > color #6.6/a:2445-2451 #FFDB66
    60706 
    60707 > color #6.6/a:2499-2506 lawn green
    60708 
    60709 > color #6.6/a:2449 hot pink target a
    60710 
    60711 > color #6.6/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    60712 
    60713 > color #6.6/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    60714 
    60715 > ~show #6.6
    60716 
    60717 > ~hbonds #6.6
    60718 
    60719 > name to_show #6.6/a:2058-2065,2250-2252,2445-2451,2499-2506
    60720 
    60721 > show to_show
    60722 
    60723 > ~cartoon #6.6
    60724 
    60725 > cartoon to_show
    60726 
    60727 > transparency #6.6 60 target c
    60728 
    60729 > hbonds to_show & sidechain restrict both color white
    60730 
    60731 30 hydrogen bonds found 
    60732 
    60733 > color #6.6/a white target p
    60734 
    60735 > color #6.6/a:2449,2251 spring green target p
    60736 
    60737 > color #6.6/a:2449,2065 spring green target p
    60738 
    60739 > color #6.6/a:2449,2445 spring green target p
    60740 
    60741 > color #6.6/a:2449,2446 spring green target p
    60742 
    60743 > color #6.6/a:2449,2501 spring green target p
    60744 
    60745 > volume #2.3 color black transparency 0.8
    60746 
    60747 > volume zone #2.3 nearAtoms #6.6/a:2449 & sidechain range 2
    60748 
    60749 > ~show #6.6/a:2059-2060
    60750 
    60751 > show #!6.2 models
    60752 
    60753 > ~show #6.2
    60754 
    60755 > ~cartoon #6.2
    60756 
    60757 > show #6.2/a:2449
    60758 
    60759 > volume zone #2.3 nearAtoms (#6.6/a:2449 | #6.2/a:2449 ) & sidechain range 2
    60760 
    60761 > volume zone #2.3 nearAtoms (#6.6/a:2449 | #6.2/a:2449 ) & sidechain range 1.5
    60762 
    60763 > color #6.6/a:2251@O2' | #6.6/a:2449@O2 yellow target p
    60764 
    60765 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_ape2.png height 600
    60766 > width 600 supersample 3
    60767 
    60768 > hide #!2.3 models
    60769 
    60770 > hide #!6.6 models
    60771 
    60772 > hide #!6.2 models
    60773 
    60774 > show #!2.4 models
    60775 
    60776 > volume #2.4 level 0.013000
    60777 
    60778 > show #!6.2 models
    60779 
    60780 > hide #6.2
    60781 
    60782 > color #6.2/a:2249-2252 sea green
    60783 
    60784 > color #6.2/a:2058-2066 cornflower blue
    60785 
    60786 > color #6.2/a:2445-2451 #FFDB66
    60787 
    60788 > color #6.2/a:2499-2506 lawn green
    60789 
    60790 > color #6.2/a:2449 hot pink target a
    60791 
    60792 > color #6.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    60793 
    60794 > color #6.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    60795 
    60796 > ~show #6.2
    60797 
    60798 > ~hbonds #6.2
    60799 
    60800 > name to_show #6.2/a:2058-2065,2250-2252,2445-2451,2499-2506
    60801 
    60802 > show to_show
    60803 
    60804 > ~cartoon #6.2
    60805 
    60806 > cartoon to_show
    60807 
    60808 > transparency #6.2 60 target c
    60809 
    60810 > hbonds to_show & sidechain restrict both color white
    60811 
    60812 24 hydrogen bonds found 
    60813 
    60814 > color #6.2/a white target p
    60815 
    60816 > color #6.2/a:2449,2251 spring green target p
    60817 
    60818 > color #6.2/a:2449,2065 spring green target p
    60819 
    60820 > color #6.2/a:2449,2445 spring green target p
    60821 
    60822 > color #6.2/a:2449,2446 spring green target p
    60823 
    60824 > color #6.2/a:2449,2501 spring green target p
    60825 
    60826 > volume #2.4 color black transparency 0.8
    60827 
    60828 > volume zone #2.4 nearAtoms #6.2/a:2449 & sidechain range 2
    60829 
    60830 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_ape3.png height 600
    60831 > width 600 supersample 3
    60832 
    60833 > hide #!2.4 models
    60834 
    60835 > hide #!6.2 models
    60836 
    60837 > show #!2.5 models
    60838 
    60839 > volume #2.5 level 0.013000
    60840 
    60841 > show #!6.2 models
    60842 
    60843 > hide #6.2
    60844 
    60845 > color #6.2/a:2249-2252 sea green
    60846 
    60847 > color #6.2/a:2058-2066 cornflower blue
    60848 
    60849 > color #6.2/a:2445-2451 #FFDB66
    60850 
    60851 > color #6.2/a:2499-2506 lawn green
    60852 
    60853 > color #6.2/a:2449 hot pink target a
    60854 
    60855 > color #6.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target a
    60856 
    60857 > color #6.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    60858 
    60859 > ~show #6.2
    60860 
    60861 > ~hbonds #6.2
    60862 
    60863 > name to_show #6.2/a:2058-2065,2250-2252,2445-2451,2499-2506
    60864 
    60865 > show to_show
    60866 
    60867 > ~cartoon #6.2
    60868 
    60869 > cartoon to_show
    60870 
    60871 > transparency #6.2 60 target c
    60872 
    60873 > hbonds to_show & sidechain restrict both color white
    60874 
    60875 24 hydrogen bonds found 
    60876 
    60877 > color #6.2/a white target p
    60878 
    60879 > color #6.2/a:2449,2251 spring green target p
    60880 
    60881 > color #6.2/a:2449,2065 spring green target p
    60882 
    60883 > color #6.2/a:2449,2445 spring green target p
    60884 
    60885 > color #6.2/a:2449,2446 spring green target p
    60886 
    60887 > color #6.2/a:2449,2501 spring green target p
    60888 
    60889 > volume #2.5 color black transparency 0.8
    60890 
    60891 > volume zone #2.5 nearAtoms #6.2/a:2449 & sidechain range 2
    60892 
    60893 > show #!6.6 models
    60894 
    60895 > ~show #6.6
    60896 
    60897 > ~cartoon #6.6
    60898 
    60899 > show #6.6/a:2449
    60900 
    60901 > volume zone #2.5 nearAtoms (#6.2/a:2449 | #6.6/a:2449 ) & sidechain range 2
    60902 
    60903 > ~show #6.2/a:2250-2252
    60904 
    60905 > ~cartoon #6.2/a:2449,2250-2252
    60906 
    60907 > show #6.6/a:2449,2250-2252
    60908 
    60909 > cartoon #6.6/a:2449,2250-2252
    60910 
    60911 > hbonds #6.6/a:2449@O2 restrict #6.6/a:2251@O2' color yellow
    60912 
    60913 1 hydrogen bonds found 
    60914 
    60915 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_pe.png height 600 width
    60916 > 600 supersample 3
    60917 
    60918 > hide #!2.5 models
    60919 
    60920 > hide #!6.2 models
    60921 
    60922 > hide #!6.6 models
    60923 
    60924 > show #!2.6 models
    60925 
    60926 > volume #2.6 level 0.009000
    60927 
    60928 > show #!6.10 models
    60929 
    60930 > hide #6.10
    60931 
    60932 > color #6.10/a:2249-2252 sea green
    60933 
    60934 > color #6.10/a:2058-2066 cornflower blue
    60935 
    60936 > color #6.10/a:2445-2451 #FFDB66
    60937 
    60938 > color #6.10/a:2499-2506 lawn green
    60939 
    60940 > color #6.10/a:2449 hot pink target a
    60941 
    60942 > color #6.10/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    60943 > a
    60944 
    60945 > color #6.10/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    60946 
    60947 > ~show #6.10
    60948 
    60949 > ~hbonds #6.10
    60950 
    60951 > name to_show #6.10/a:2058-2065,2250-2252,2445-2451,2499-2506
    60952 
    60953 > show to_show
    60954 
    60955 > ~cartoon #6.10
    60956 
    60957 > cartoon to_show
    60958 
    60959 > transparency #6.10 60 target c
    60960 
    60961 > hbonds to_show & sidechain restrict both color white
    60962 
    60963 29 hydrogen bonds found 
    60964 
    60965 > color #6.10/a white target p
    60966 
    60967 > color #6.10/a:2449,2251 spring green target p
    60968 
    60969 > color #6.10/a:2449,2065 spring green target p
    60970 
    60971 > color #6.10/a:2449,2445 spring green target p
    60972 
    60973 > color #6.10/a:2449,2446 spring green target p
    60974 
    60975 > color #6.10/a:2449,2501 spring green target p
    60976 
    60977 > volume #2.6 color black transparency 0.8
    60978 
    60979 > volume zone #2.6 nearAtoms #6.10/a:2449 & sidechain range 2
    60980 
    60981 > show #!6.6 models
    60982 
    60983 > ~show #6.6
    60984 
    60985 > ~cartoon #6.6
    60986 
    60987 > show #6.6/a:2449
    60988 
    60989 > volume zone #2.6 nearAtoms (#6.10/a:2449 | #6.6/a:2449 ) & sidechain range 2
    60990 
    60991 > ~show #6.10/a:2250-2252
    60992 
    60993 > ~cartoon #6.10/a:2449,2250-2252
    60994 
    60995 > show #6.6/a:2449,2250-2252
    60996 
    60997 > cartoon #6.6/a:2449,2250-2252
    60998 
    60999 > hbonds #6.6/a:2449@O2 restrict #6.6/a:2251@O2' color yellow
    61000 
    61001 1 hydrogen bonds found 
    61002 
    61003 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d9_e.png height 600 width
    61004 > 600 supersample 3
    61005 
    61006 > hide #!2.6 models
    61007 
    61008 > hide #!6.10 models
    61009 
    61010 > hide #!6.6 models
    61011 
    61012 > show #!10.1 models
    61013 
    61014 > volume #10.1 level 0.011000
    61015 
    61016 > show #!14.3 models
    61017 
    61018 > hide #14.3
    61019 
    61020 > color #14.3/a:2249-2252 sea green
    61021 
    61022 > color #14.3/a:2058-2066 cornflower blue
    61023 
    61024 > color #14.3/a:2445-2451 #FFDB66
    61025 
    61026 > color #14.3/a:2499-2506 lawn green
    61027 
    61028 > color #14.3/a:2449 hot pink target a
    61029 
    61030 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    61031 > a
    61032 
    61033 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    61034 
    61035 > ~show #14.3
    61036 
    61037 > ~hbonds #14.3
    61038 
    61039 > name to_show #14.3/a:2058-2065,2250-2252,2445-2451,2499-2506
    61040 
    61041 > show to_show
    61042 
    61043 > ~cartoon #14.3
    61044 
    61045 > cartoon to_show
    61046 
    61047 > transparency #14.3 60 target c
    61048 
    61049 > hbonds to_show & sidechain restrict both color white
    61050 
    61051 21 hydrogen bonds found 
    61052 
    61053 > color #14.3/a white target p
    61054 
    61055 > color #14.3/a:2449,2251 spring green target p
    61056 
    61057 > color #14.3/a:2449,2065 spring green target p
    61058 
    61059 > color #14.3/a:2449,2445 spring green target p
    61060 
    61061 > color #14.3/a:2449,2446 spring green target p
    61062 
    61063 > color #14.3/a:2449,2501 spring green target p
    61064 
    61065 > volume #10.1 color black transparency 0.8
    61066 
    61067 > volume zone #10.1 nearAtoms #14.3/a:2449 & sidechain range 2
    61068 
    61069 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_ape.png height 600
    61070 > width 600 supersample 3
    61071 
    61072 > hide #!10.1 models
    61073 
    61074 > hide #!14.3 models
    61075 
    61076 > show #!10.2 models
    61077 
    61078 > volume #10.2 level 0.011000
    61079 
    61080 > show #!14.6 models
    61081 
    61082 > hide #14.6
    61083 
    61084 > color #14.6/a:2249-2252 sea green
    61085 
    61086 > color #14.6/a:2058-2066 cornflower blue
    61087 
    61088 > color #14.6/a:2445-2451 #FFDB66
    61089 
    61090 > color #14.6/a:2499-2506 lawn green
    61091 
    61092 > color #14.6/a:2449 hot pink target a
    61093 
    61094 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    61095 > a
    61096 
    61097 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    61098 
    61099 > ~show #14.6
    61100 
    61101 > ~hbonds #14.6
    61102 
    61103 > name to_show #14.6/a:2058-2065,2250-2252,2445-2451,2499-2506
    61104 
    61105 > show to_show
    61106 
    61107 > ~cartoon #14.6
    61108 
    61109 > cartoon to_show
    61110 
    61111 > transparency #14.6 60 target c
    61112 
    61113 > hbonds to_show & sidechain restrict both color white
    61114 
    61115 27 hydrogen bonds found 
    61116 
    61117 > color #14.6/a white target p
    61118 
    61119 > color #14.6/a:2449,2251 spring green target p
    61120 
    61121 > color #14.6/a:2449,2065 spring green target p
    61122 
    61123 > color #14.6/a:2449,2445 spring green target p
    61124 
    61125 > color #14.6/a:2449,2446 spring green target p
    61126 
    61127 > color #14.6/a:2449,2501 spring green target p
    61128 
    61129 > volume #10.2 color black transparency 0.8
    61130 
    61131 > volume zone #10.2 nearAtoms #14.6/a:2449 & sidechain range 2
    61132 
    61133 > show #!14.3 models
    61134 
    61135 > ~show #14.3
    61136 
    61137 > ~cartoon #14.3
    61138 
    61139 > show #14.3/a:2449
    61140 
    61141 > volume zone #10.2 nearAtoms (#14.6/a:2449 | #14.3/a:2449 ) & sidechain range 2
    61142 
    61143 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_pe.png height 600 width
    61144 > 600 supersample 3
    61145 
    61146 > hide #!10.2 models
    61147 
    61148 > hide #!14.6 models
    61149 
    61150 > hide #!14.3 models
    61151 
    61152 > show #!10.3 models
    61153 
    61154 > volume #10.3 level 0.011000
    61155 
    61156 > show #!14.10 models
    61157 
    61158 > hide #14.10
    61159 
    61160 > color #14.10/a:2249-2252 sea green
    61161 
    61162 > color #14.10/a:2058-2066 cornflower blue
    61163 
    61164 > color #14.10/a:2445-2451 #FFDB66
    61165 
    61166 > color #14.10/a:2499-2506 lawn green
    61167 
    61168 > color #14.10/a:2449 hot pink target a
    61169 
    61170 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    61171 > a
    61172 
    61173 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target
    61174 > a
    61175 
    61176 > ~show #14.10
    61177 
    61178 > ~hbonds #14.10
    61179 
    61180 > name to_show #14.10/a:2058-2065,2250-2252,2445-2451,2499-2506
    61181 
    61182 > show to_show
    61183 
    61184 > ~cartoon #14.10
    61185 
    61186 > cartoon to_show
    61187 
    61188 > transparency #14.10 60 target c
    61189 
    61190 > hbonds to_show & sidechain restrict both color white
    61191 
    61192 22 hydrogen bonds found 
    61193 
    61194 > color #14.10/a white target p
    61195 
    61196 > color #14.10/a:2449,2251 spring green target p
    61197 
    61198 > color #14.10/a:2449,2065 spring green target p
    61199 
    61200 > color #14.10/a:2449,2445 spring green target p
    61201 
    61202 > color #14.10/a:2449,2446 spring green target p
    61203 
    61204 > color #14.10/a:2449,2501 spring green target p
    61205 
    61206 > volume #10.3 color black transparency 0.8
    61207 
    61208 > volume zone #10.3 nearAtoms #14.10/a:2449 & sidechain range 2
    61209 
    61210 > show #!14.5 models
    61211 
    61212 > ~show #14.5
    61213 
    61214 > ~cartoon #14.5
    61215 
    61216 > show #14.5/a:2449
    61217 
    61218 > volume zone #10.3 nearAtoms (#14.10/a:2449 | #14.5/a:2449 ) & sidechain range 2
    61219 
    61220 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_e.png height 600 width
    61221 > 600 supersample 3
    61222 
    61223 > hide #!10.3 models
    61224 
    61225 > hide #!14.10 models
    61226 
    61227 > hide #!14.5 models
    61228 
    61229 > show #!12.10 models
    61230 
    61231 > volume #12.10 level 0.350000
    61232 
    61233 > show #!14.10 models
    61234 
    61235 > hide #14.10
    61236 
    61237 > color #14.10/a:2249-2252 sea green
    61238 
    61239 > color #14.10/a:2058-2066 cornflower blue
    61240 
    61241 > color #14.10/a:2445-2451 #FFDB66
    61242 
    61243 > color #14.10/a:2499-2506 lawn green
    61244 
    61245 > color #14.10/a:2449 hot pink target a
    61246 
    61247 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    61248 > a
    61249 
    61250 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target
    61251 > a
    61252 
    61253 > ~show #14.10
    61254 
    61255 > ~hbonds #14.10
    61256 
    61257 > name to_show #14.10/a:2058-2065,2250-2252,2445-2451,2499-2506
    61258 
    61259 > show to_show
    61260 
    61261 > ~cartoon #14.10
    61262 
    61263 > cartoon to_show
    61264 
    61265 > transparency #14.10 60 target c
    61266 
    61267 > hbonds to_show & sidechain restrict both color white
    61268 
    61269 22 hydrogen bonds found 
    61270 
    61271 > color #14.10/a white target p
    61272 
    61273 > color #14.10/a:2449,2251 spring green target p
    61274 
    61275 > color #14.10/a:2449,2065 spring green target p
    61276 
    61277 > color #14.10/a:2449,2445 spring green target p
    61278 
    61279 > color #14.10/a:2449,2446 spring green target p
    61280 
    61281 > color #14.10/a:2449,2501 spring green target p
    61282 
    61283 > volume #12.10 color black transparency 0.8
    61284 
    61285 > volume zone #12.10 nearAtoms #14.10/a:2449 & sidechain range 2
    61286 
    61287 > show #!14.4 models
    61288 
    61289 > ~show #14.4
    61290 
    61291 > ~cartoon #14.4
    61292 
    61293 > show #14.4/a:2449
    61294 
    61295 > volume zone #12.10 nearAtoms (#14.10/a:2449 | #14.4/a:2449 ) & sidechain range 2
    61296 
    61297 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J53_c0.png height 600
    61298 > width 600 supersample 3
    61299 
    61300 > hide #!12.10 models
    61301 
    61302 > hide #!14.10 models
    61303 
    61304 > hide #!14.4 models
    61305 
    61306 > show #!12.1 models
    61307 
    61308 > volume #12.1 level 0.350000
    61309 
    61310 > show #!14.1 models
    61311 
    61312 > hide #14.1
    61313 
    61314 > color #14.1/a:2249-2252 sea green
    61315 
    61316 > color #14.1/a:2058-2066 cornflower blue
    61317 
    61318 > color #14.1/a:2445-2451 #FFDB66
    61319 
    61320 > color #14.1/a:2499-2506 lawn green
    61321 
    61322 > color #14.1/a:2449 hot pink target a
    61323 
    61324 > color #14.1/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    61325 > a
    61326 
    61327 > color #14.1/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    61328 
    61329 > ~show #14.1
    61330 
    61331 > ~hbonds #14.1
    61332 
    61333 > name to_show #14.1/a:2058-2065,2250-2252,2445-2451,2499-2506
    61334 
    61335 > show to_show
    61336 
    61337 > ~cartoon #14.1
    61338 
    61339 > cartoon to_show
    61340 
    61341 > transparency #14.1 60 target c
    61342 
    61343 > hbonds to_show & sidechain restrict both color white
    61344 
    61345 23 hydrogen bonds found 
    61346 
    61347 > color #14.1/a white target p
    61348 
    61349 > color #14.1/a:2449,2251 spring green target p
    61350 
    61351 > color #14.1/a:2449,2065 spring green target p
    61352 
    61353 > color #14.1/a:2449,2445 spring green target p
    61354 
    61355 > color #14.1/a:2449,2446 spring green target p
    61356 
    61357 > color #14.1/a:2449,2501 spring green target p
    61358 
    61359 > volume #12.1 color black transparency 0.8
    61360 
    61361 > volume zone #12.1 nearAtoms #14.1/a:2449 & sidechain range 2
    61362 
    61363 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J54_c1.png height 600
    61364 > width 600 supersample 3
    61365 
    61366 > hide #!12.1 models
    61367 
    61368 > hide #!14.1 models
    61369 
    61370 > show #!12.2 models
    61371 
    61372 > volume #12.2 level 0.350000
    61373 
    61374 > show #!14.2 models
    61375 
    61376 > hide #14.2
    61377 
    61378 > color #14.2/a:2249-2252 sea green
    61379 
    61380 > color #14.2/a:2058-2066 cornflower blue
    61381 
    61382 > color #14.2/a:2445-2451 #FFDB66
    61383 
    61384 > color #14.2/a:2499-2506 lawn green
    61385 
    61386 > color #14.2/a:2449 hot pink target a
    61387 
    61388 > color #14.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    61389 > a
    61390 
    61391 > color #14.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    61392 
    61393 > ~show #14.2
    61394 
    61395 > ~hbonds #14.2
    61396 
    61397 > name to_show #14.2/a:2058-2065,2250-2252,2445-2451,2499-2506
    61398 
    61399 > show to_show
    61400 
    61401 > ~cartoon #14.2
    61402 
    61403 > cartoon to_show
    61404 
    61405 > transparency #14.2 60 target c
    61406 
    61407 > hbonds to_show & sidechain restrict both color white
    61408 
    61409 26 hydrogen bonds found 
    61410 
    61411 > color #14.2/a white target p
    61412 
    61413 > color #14.2/a:2449,2251 spring green target p
    61414 
    61415 > color #14.2/a:2449,2065 spring green target p
    61416 
    61417 > color #14.2/a:2449,2445 spring green target p
    61418 
    61419 > color #14.2/a:2449,2446 spring green target p
    61420 
    61421 > color #14.2/a:2449,2501 spring green target p
    61422 
    61423 > volume #12.2 color black transparency 0.8
    61424 
    61425 > volume zone #12.2 nearAtoms #14.2/a:2449 & sidechain range 2
    61426 
    61427 > show #!14.3 models
    61428 
    61429 > ~show #14.3
    61430 
    61431 > ~cartoon #14.3
    61432 
    61433 > show #14.3/a:2449
    61434 
    61435 > volume zone #12.2 nearAtoms (#14.2/a:2449 | #14.3/a:2449 ) & sidechain range 2
    61436 
    61437 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J55_c2.png height 600
    61438 > width 600 supersample 3
    61439 
    61440 > hide #!12.2 models
    61441 
    61442 > hide #!14.2 models
    61443 
    61444 > hide #!14.3 models
    61445 
    61446 > show #!12.3 models
    61447 
    61448 > volume #12.3 level 0.350000
    61449 
    61450 > show #!14.3 models
    61451 
    61452 > hide #14.3
    61453 
    61454 > color #14.3/a:2249-2252 sea green
    61455 
    61456 > color #14.3/a:2058-2066 cornflower blue
    61457 
    61458 > color #14.3/a:2445-2451 #FFDB66
    61459 
    61460 > color #14.3/a:2499-2506 lawn green
    61461 
    61462 > color #14.3/a:2449 hot pink target a
    61463 
    61464 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    61465 > a
    61466 
    61467 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    61468 
    61469 > ~show #14.3
    61470 
    61471 > ~hbonds #14.3
    61472 
    61473 > name to_show #14.3/a:2058-2065,2250-2252,2445-2451,2499-2506
    61474 
    61475 > show to_show
    61476 
    61477 > ~cartoon #14.3
    61478 
    61479 > cartoon to_show
    61480 
    61481 > transparency #14.3 60 target c
    61482 
    61483 > hbonds to_show & sidechain restrict both color white
    61484 
    61485 21 hydrogen bonds found 
    61486 
    61487 > color #14.3/a white target p
    61488 
    61489 > color #14.3/a:2449,2251 spring green target p
    61490 
    61491 > color #14.3/a:2449,2065 spring green target p
    61492 
    61493 > color #14.3/a:2449,2445 spring green target p
    61494 
    61495 > color #14.3/a:2449,2446 spring green target p
    61496 
    61497 > color #14.3/a:2449,2501 spring green target p
    61498 
    61499 > volume #12.3 color black transparency 0.8
    61500 
    61501 > volume zone #12.3 nearAtoms #14.3/a:2449 & sidechain range 2
    61502 
    61503 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J56_c3.png height 600
    61504 > width 600 supersample 3
    61505 
    61506 > hide #!12.3 models
    61507 
    61508 > hide #!14.3 models
    61509 
    61510 > show #!12.4 models
    61511 
    61512 > volume #12.4 level 0.350000
    61513 
    61514 > show #!14.4 models
    61515 
    61516 > hide #14.4
    61517 
    61518 > color #14.4/a:2249-2252 sea green
    61519 
    61520 > color #14.4/a:2058-2066 cornflower blue
    61521 
    61522 > color #14.4/a:2445-2451 #FFDB66
    61523 
    61524 > color #14.4/a:2499-2506 lawn green
    61525 
    61526 > color #14.4/a:2449 hot pink target a
    61527 
    61528 > color #14.4/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    61529 > a
    61530 
    61531 > color #14.4/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    61532 
    61533 > ~show #14.4
    61534 
    61535 > ~hbonds #14.4
    61536 
    61537 > name to_show #14.4/a:2058-2065,2250-2252,2445-2451,2499-2506
    61538 
    61539 > show to_show
    61540 
    61541 > ~cartoon #14.4
    61542 
    61543 > cartoon to_show
    61544 
    61545 > transparency #14.4 60 target c
    61546 
    61547 > hbonds to_show & sidechain restrict both color white
    61548 
    61549 22 hydrogen bonds found 
    61550 
    61551 > color #14.4/a white target p
    61552 
    61553 > color #14.4/a:2449,2251 spring green target p
    61554 
    61555 > color #14.4/a:2449,2065 spring green target p
    61556 
    61557 > color #14.4/a:2449,2445 spring green target p
    61558 
    61559 > color #14.4/a:2449,2446 spring green target p
    61560 
    61561 > color #14.4/a:2449,2501 spring green target p
    61562 
    61563 > volume #12.4 color black transparency 0.8
    61564 
    61565 > volume zone #12.4 nearAtoms #14.4/a:2449 & sidechain range 2
    61566 
    61567 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J57_c4.png height 600
    61568 > width 600 supersample 3
    61569 
    61570 > hide #!12.4 models
    61571 
    61572 > hide #!14.4 models
    61573 
    61574 > show #!12.5 models
    61575 
    61576 > volume #12.5 level 0.350000
    61577 
    61578 > show #!14.5 models
    61579 
    61580 > hide #14.5
    61581 
    61582 > color #14.5/a:2249-2252 sea green
    61583 
    61584 > color #14.5/a:2058-2066 cornflower blue
    61585 
    61586 > color #14.5/a:2445-2451 #FFDB66
    61587 
    61588 > color #14.5/a:2499-2506 lawn green
    61589 
    61590 > color #14.5/a:2449 hot pink target a
    61591 
    61592 > color #14.5/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    61593 > a
    61594 
    61595 > color #14.5/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    61596 
    61597 > ~show #14.5
    61598 
    61599 > ~hbonds #14.5
    61600 
    61601 > name to_show #14.5/a:2058-2065,2250-2252,2445-2451,2499-2506
    61602 
    61603 > show to_show
    61604 
    61605 > ~cartoon #14.5
    61606 
    61607 > cartoon to_show
    61608 
    61609 > transparency #14.5 60 target c
    61610 
    61611 > hbonds to_show & sidechain restrict both color white
    61612 
    61613 20 hydrogen bonds found 
    61614 
    61615 > color #14.5/a white target p
    61616 
    61617 > color #14.5/a:2449,2251 spring green target p
    61618 
    61619 > color #14.5/a:2449,2065 spring green target p
    61620 
    61621 > color #14.5/a:2449,2445 spring green target p
    61622 
    61623 > color #14.5/a:2449,2446 spring green target p
    61624 
    61625 > color #14.5/a:2449,2501 spring green target p
    61626 
    61627 > volume #12.5 color black transparency 0.8
    61628 
    61629 > volume zone #12.5 nearAtoms #14.5/a:2449 & sidechain range 2
    61630 
    61631 > show #!14.3 models
    61632 
    61633 > ~show #14.3
    61634 
    61635 > ~cartoon #14.3
    61636 
    61637 > show #14.3/a:2449
    61638 
    61639 > volume zone #12.5 nearAtoms (#14.5/a:2449 | #14.3/a:2449 ) & sidechain range 2
    61640 
    61641 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J58_c5.png height 600
    61642 > width 600 supersample 3
    61643 
    61644 > hide #!12.5 models
    61645 
    61646 > hide #!14.5 models
    61647 
    61648 > hide #!14.3 models
    61649 
    61650 > show #!12.6 models
    61651 
    61652 > volume #12.6 level 0.350000
    61653 
    61654 > show #!14.6 models
    61655 
    61656 > hide #14.6
    61657 
    61658 > color #14.6/a:2249-2252 sea green
    61659 
    61660 > color #14.6/a:2058-2066 cornflower blue
    61661 
    61662 > color #14.6/a:2445-2451 #FFDB66
    61663 
    61664 > color #14.6/a:2499-2506 lawn green
    61665 
    61666 > color #14.6/a:2449 hot pink target a
    61667 
    61668 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    61669 > a
    61670 
    61671 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    61672 
    61673 > ~show #14.6
    61674 
    61675 > ~hbonds #14.6
    61676 
    61677 > name to_show #14.6/a:2058-2065,2250-2252,2445-2451,2499-2506
    61678 
    61679 > show to_show
    61680 
    61681 > ~cartoon #14.6
    61682 
    61683 > cartoon to_show
    61684 
    61685 > transparency #14.6 60 target c
    61686 
    61687 > hbonds to_show & sidechain restrict both color white
    61688 
    61689 27 hydrogen bonds found 
    61690 
    61691 > color #14.6/a white target p
    61692 
    61693 > color #14.6/a:2449,2251 spring green target p
    61694 
    61695 > color #14.6/a:2449,2065 spring green target p
    61696 
    61697 > color #14.6/a:2449,2445 spring green target p
    61698 
    61699 > color #14.6/a:2449,2446 spring green target p
    61700 
    61701 > color #14.6/a:2449,2501 spring green target p
    61702 
    61703 > volume #12.6 color black transparency 0.8
    61704 
    61705 > volume zone #12.6 nearAtoms #14.6/a:2449 & sidechain range 2
    61706 
    61707 > show #!14.3 models
    61708 
    61709 > ~show #14.3
    61710 
    61711 > ~cartoon #14.3
    61712 
    61713 > show #14.3/a:2449
    61714 
    61715 > volume zone #12.6 nearAtoms (#14.6/a:2449 | #14.3/a:2449 ) & sidechain range 2
    61716 
    61717 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J59_c6.png height 600
    61718 > width 600 supersample 3
    61719 
    61720 > hide #!12.6 models
    61721 
    61722 > hide #!14.6 models
    61723 
    61724 > hide #!14.3 models
    61725 
    61726 > show #!12.7 models
    61727 
    61728 > volume #12.7 level 0.350000
    61729 
    61730 > show #!14.7 models
    61731 
    61732 > hide #14.7
    61733 
    61734 > color #14.7/a:2249-2252 sea green
    61735 
    61736 > color #14.7/a:2058-2066 cornflower blue
    61737 
    61738 > color #14.7/a:2445-2451 #FFDB66
    61739 
    61740 > color #14.7/a:2499-2506 lawn green
    61741 
    61742 > color #14.7/a:2449 hot pink target a
    61743 
    61744 > color #14.7/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    61745 > a
    61746 
    61747 > color #14.7/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    61748 
    61749 > ~show #14.7
    61750 
    61751 > ~hbonds #14.7
    61752 
    61753 > name to_show #14.7/a:2058-2065,2250-2252,2445-2451,2499-2506
    61754 
    61755 > show to_show
    61756 
    61757 > ~cartoon #14.7
    61758 
    61759 > cartoon to_show
    61760 
    61761 > transparency #14.7 60 target c
    61762 
    61763 > hbonds to_show & sidechain restrict both color white
    61764 
    61765 24 hydrogen bonds found 
    61766 
    61767 > color #14.7/a white target p
    61768 
    61769 > color #14.7/a:2449,2251 spring green target p
    61770 
    61771 > color #14.7/a:2449,2065 spring green target p
    61772 
    61773 > color #14.7/a:2449,2445 spring green target p
    61774 
    61775 > color #14.7/a:2449,2446 spring green target p
    61776 
    61777 > color #14.7/a:2449,2501 spring green target p
    61778 
    61779 > volume #12.7 color black transparency 0.8
    61780 
    61781 > volume zone #12.7 nearAtoms #14.7/a:2449 & sidechain range 2
    61782 
    61783 > show #!14.4 models
    61784 
    61785 > ~show #14.4
    61786 
    61787 > ~cartoon #14.4
    61788 
    61789 > show #14.4/a:2449
    61790 
    61791 > volume zone #12.7 nearAtoms (#14.7/a:2449 | #14.4/a:2449 ) & sidechain range 2
    61792 
    61793 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J60_c7.png height 600
    61794 > width 600 supersample 3
    61795 
    61796 > hide #!12.7 models
    61797 
    61798 > hide #!14.7 models
    61799 
    61800 > hide #!14.4 models
    61801 
    61802 > show #!12.8 models
    61803 
    61804 > volume #12.8 level 0.350000
    61805 
    61806 > show #!14.8 models
    61807 
    61808 > hide #14.8
    61809 
    61810 > color #14.8/a:2249-2252 sea green
    61811 
    61812 > color #14.8/a:2058-2066 cornflower blue
    61813 
    61814 > color #14.8/a:2445-2451 #FFDB66
    61815 
    61816 > color #14.8/a:2499-2506 lawn green
    61817 
    61818 > color #14.8/a:2449 hot pink target a
    61819 
    61820 > color #14.8/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    61821 > a
    61822 
    61823 > color #14.8/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    61824 
    61825 > ~show #14.8
    61826 
    61827 > ~hbonds #14.8
    61828 
    61829 > name to_show #14.8/a:2058-2065,2250-2252,2445-2451,2499-2506
    61830 
    61831 > show to_show
    61832 
    61833 > ~cartoon #14.8
    61834 
    61835 > cartoon to_show
    61836 
    61837 > transparency #14.8 60 target c
    61838 
    61839 > hbonds to_show & sidechain restrict both color white
    61840 
    61841 24 hydrogen bonds found 
    61842 
    61843 > color #14.8/a white target p
    61844 
    61845 > color #14.8/a:2449,2251 spring green target p
    61846 
    61847 > color #14.8/a:2449,2065 spring green target p
    61848 
    61849 > color #14.8/a:2449,2445 spring green target p
    61850 
    61851 > color #14.8/a:2449,2446 spring green target p
    61852 
    61853 > color #14.8/a:2449,2501 spring green target p
    61854 
    61855 > volume #12.8 color black transparency 0.8
    61856 
    61857 > volume zone #12.8 nearAtoms #14.8/a:2449 & sidechain range 2
    61858 
    61859 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J61_c8.png height 600
    61860 > width 600 supersample 3
    61861 
    61862 > hide #!12.8 models
    61863 
    61864 > hide #!14.8 models
    61865 
    61866 > show #!12.9 models
    61867 
    61868 > volume #12.9 level 0.350000
    61869 
    61870 > show #!14.9 models
    61871 
    61872 > hide #14.9
    61873 
    61874 > color #14.9/a:2249-2252 sea green
    61875 
    61876 > color #14.9/a:2058-2066 cornflower blue
    61877 
    61878 > color #14.9/a:2445-2451 #FFDB66
    61879 
    61880 > color #14.9/a:2499-2506 lawn green
    61881 
    61882 > color #14.9/a:2449 hot pink target a
    61883 
    61884 > color #14.9/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    61885 > a
    61886 
    61887 > color #14.9/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    61888 
    61889 > ~show #14.9
    61890 
    61891 > ~hbonds #14.9
    61892 
    61893 > name to_show #14.9/a:2058-2065,2250-2252,2445-2451,2499-2506
    61894 
    61895 > show to_show
    61896 
    61897 > ~cartoon #14.9
    61898 
    61899 > cartoon to_show
    61900 
    61901 > transparency #14.9 60 target c
    61902 
    61903 > hbonds to_show & sidechain restrict both color white
    61904 
    61905 27 hydrogen bonds found 
    61906 
    61907 > color #14.9/a white target p
    61908 
    61909 > color #14.9/a:2449,2251 spring green target p
    61910 
    61911 > color #14.9/a:2449,2065 spring green target p
    61912 
    61913 > color #14.9/a:2449,2445 spring green target p
    61914 
    61915 > color #14.9/a:2449,2446 spring green target p
    61916 
    61917 > color #14.9/a:2449,2501 spring green target p
    61918 
    61919 > volume #12.9 color black transparency 0.8
    61920 
    61921 > volume zone #12.9 nearAtoms #14.9/a:2449 & sidechain range 2
    61922 
    61923 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J62_c9.png height 600
    61924 > width 600 supersample 3
    61925 
    61926 > hide #!12.9 models
    61927 
    61928 > hide #!14.9 models
    61929 
    61930 > show #!21.1 models
    61931 
    61932 > volume #21.1 level 0.250000
    61933 
    61934 > show #!22.1 models
    61935 
    61936 > hide #22.1
    61937 
    61938 > color #22.1/a:2249-2252 sea green
    61939 
    61940 > color #22.1/a:2058-2066 cornflower blue
    61941 
    61942 > color #22.1/a:2445-2451 #FFDB66
    61943 
    61944 > color #22.1/a:2499-2506 lawn green
    61945 
    61946 > color #22.1/a:2449 hot pink target a
    61947 
    61948 > color #22.1/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    61949 > a
    61950 
    61951 > color #22.1/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    61952 
    61953 > ~show #22.1
    61954 
    61955 > ~hbonds #22.1
    61956 
    61957 > name to_show #22.1/a:2058-2065,2250-2252,2445-2451,2499-2506
    61958 
    61959 > show to_show
    61960 
    61961 > ~cartoon #22.1
    61962 
    61963 > cartoon to_show
    61964 
    61965 > transparency #22.1 60 target c
    61966 
    61967 > hbonds to_show & sidechain restrict both color white
    61968 
    61969 23 hydrogen bonds found 
    61970 
    61971 > color #22.1/a white target p
    61972 
    61973 > color #22.1/a:2449,2251 spring green target p
    61974 
    61975 > color #22.1/a:2449,2065 spring green target p
    61976 
    61977 > color #22.1/a:2449,2445 spring green target p
    61978 
    61979 > color #22.1/a:2449,2446 spring green target p
    61980 
    61981 > color #22.1/a:2449,2501 spring green target p
    61982 
    61983 > volume #21.1 color black transparency 0.8
    61984 
    61985 > volume zone #21.1 nearAtoms #22.1/a:2449 & sidechain range 2
    61986 
    61987 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J111_ape_sharp.png
    61988 > height 600 width 600 supersample 3
    61989 
    61990 > hide #!21.1 models
    61991 
    61992 > hide #!22.1 models
    61993 
    61994 > show #!21.2 models
    61995 
    61996 > volume #21.2 level 0.250000
    61997 
    61998 > show #!22.2 models
    61999 
    62000 > hide #22.2
    62001 
    62002 > color #22.2/a:2249-2252 sea green
    62003 
    62004 > color #22.2/a:2058-2066 cornflower blue
    62005 
    62006 > color #22.2/a:2445-2451 #FFDB66
    62007 
    62008 > color #22.2/a:2499-2506 lawn green
    62009 
    62010 > color #22.2/a:2449 hot pink target a
    62011 
    62012 > color #22.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    62013 > a
    62014 
    62015 > color #22.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    62016 
    62017 > ~show #22.2
    62018 
    62019 > ~hbonds #22.2
    62020 
    62021 > name to_show #22.2/a:2058-2065,2250-2252,2445-2451,2499-2506
    62022 
    62023 > show to_show
    62024 
    62025 > ~cartoon #22.2
    62026 
    62027 > cartoon to_show
    62028 
    62029 > transparency #22.2 60 target c
    62030 
    62031 > hbonds to_show & sidechain restrict both color white
    62032 
    62033 26 hydrogen bonds found 
    62034 
    62035 > color #22.2/a white target p
    62036 
    62037 > color #22.2/a:2449,2251 spring green target p
    62038 
    62039 > color #22.2/a:2449,2065 spring green target p
    62040 
    62041 > color #22.2/a:2449,2445 spring green target p
    62042 
    62043 > color #22.2/a:2449,2446 spring green target p
    62044 
    62045 > color #22.2/a:2449,2501 spring green target p
    62046 
    62047 > volume #21.2 color black transparency 0.8
    62048 
    62049 > volume zone #21.2 nearAtoms #22.2/a:2449 & sidechain range 2
    62050 
    62051 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J112_ap_sharp.png height
    62052 > 600 width 600 supersample 3
    62053 
    62054 > hide #!21.2 models
    62055 
    62056 > hide #!22.2 models
    62057 
    62058 > show #!21.3 models
    62059 
    62060 > volume #21.3 level 0.250000
    62061 
    62062 > show #!22.3 models
    62063 
    62064 > hide #22.3
    62065 
    62066 > color #22.3/a:2249-2252 sea green
    62067 
    62068 > color #22.3/a:2058-2066 cornflower blue
    62069 
    62070 > color #22.3/a:2445-2451 #FFDB66
    62071 
    62072 > color #22.3/a:2499-2506 lawn green
    62073 
    62074 > color #22.3/a:2449 hot pink target a
    62075 
    62076 > color #22.3/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    62077 > a
    62078 
    62079 > color #22.3/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    62080 
    62081 > ~show #22.3
    62082 
    62083 > ~hbonds #22.3
    62084 
    62085 > name to_show #22.3/a:2058-2065,2250-2252,2445-2451,2499-2506
    62086 
    62087 > show to_show
    62088 
    62089 > ~cartoon #22.3
    62090 
    62091 > cartoon to_show
    62092 
    62093 > transparency #22.3 60 target c
    62094 
    62095 > hbonds to_show & sidechain restrict both color white
    62096 
    62097 25 hydrogen bonds found 
    62098 
    62099 > color #22.3/a white target p
    62100 
    62101 > color #22.3/a:2449,2251 spring green target p
    62102 
    62103 > color #22.3/a:2449,2065 spring green target p
    62104 
    62105 > color #22.3/a:2449,2445 spring green target p
    62106 
    62107 > color #22.3/a:2449,2446 spring green target p
    62108 
    62109 > color #22.3/a:2449,2501 spring green target p
    62110 
    62111 > volume #21.3 color black transparency 0.8
    62112 
    62113 > volume zone #21.3 nearAtoms #22.3/a:2449 & sidechain range 2
    62114 
    62115 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J113_pe_sharp.png height
    62116 > 600 width 600 supersample 3
    62117 
    62118 > hide #!21.3 models
    62119 
    62120 > hide #!22.3 models
    62121 
    62122 > show #!21.4 models
    62123 
    62124 > volume #21.4 level 0.250000
    62125 
    62126 > show #!22.4 models
    62127 
    62128 > hide #22.4
    62129 
    62130 > color #22.4/a:2249-2252 sea green
    62131 
    62132 > color #22.4/a:2058-2066 cornflower blue
    62133 
    62134 > color #22.4/a:2445-2451 #FFDB66
    62135 
    62136 > color #22.4/a:2499-2506 lawn green
    62137 
    62138 > color #22.4/a:2449 hot pink target a
    62139 
    62140 > color #22.4/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    62141 > a
    62142 
    62143 > color #22.4/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    62144 
    62145 > ~show #22.4
    62146 
    62147 > ~hbonds #22.4
    62148 
    62149 > name to_show #22.4/a:2058-2065,2250-2252,2445-2451,2499-2506
    62150 
    62151 > show to_show
    62152 
    62153 > ~cartoon #22.4
    62154 
    62155 > cartoon to_show
    62156 
    62157 > transparency #22.4 60 target c
    62158 
    62159 > hbonds to_show & sidechain restrict both color white
    62160 
    62161 22 hydrogen bonds found 
    62162 
    62163 > color #22.4/a white target p
    62164 
    62165 > color #22.4/a:2449,2251 spring green target p
    62166 
    62167 > color #22.4/a:2449,2065 spring green target p
    62168 
    62169 > color #22.4/a:2449,2445 spring green target p
    62170 
    62171 > color #22.4/a:2449,2446 spring green target p
    62172 
    62173 > color #22.4/a:2449,2501 spring green target p
    62174 
    62175 > volume #21.4 color black transparency 0.8
    62176 
    62177 > volume zone #21.4 nearAtoms #22.4/a:2449 & sidechain range 2
    62178 
    62179 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J124_e_sharp.png height
    62180 > 600 width 600 supersample 3
    62181 
    62182 > hide #!21.4 models
    62183 
    62184 > hide #!22.4 models
    62185 
    62186 > show #!10.1 models
    62187 
    62188 > volume #10.1 level 0.011000
    62189 
    62190 > show #!14.3 models
    62191 
    62192 > hide #14.3
    62193 
    62194 > color #14.3/a:2249-2252 sea green
    62195 
    62196 > color #14.3/a:2058-2066 cornflower blue
    62197 
    62198 > color #14.3/a:2445-2451 #FFDB66
    62199 
    62200 > color #14.3/a:2499-2506 lawn green
    62201 
    62202 > color #14.3/a:2449 hot pink target a
    62203 
    62204 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    62205 > a
    62206 
    62207 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    62208 
    62209 > ~show #14.3
    62210 
    62211 > ~hbonds #14.3
    62212 
    62213 > name to_show #14.3/a:2058-2065,2250-2252,2445-2451,2499-2506
    62214 
    62215 > show to_show
    62216 
    62217 > ~cartoon #14.3
    62218 
    62219 > cartoon to_show
    62220 
    62221 > transparency #14.3 60 target c
    62222 
    62223 > hbonds to_show & sidechain restrict both color white
    62224 
    62225 21 hydrogen bonds found 
    62226 
    62227 > color #14.3/a white target p
    62228 
    62229 > color #14.3/a:2449,2251 spring green target p
    62230 
    62231 > color #14.3/a:2449,2065 spring green target p
    62232 
    62233 > color #14.3/a:2449,2445 spring green target p
    62234 
    62235 > color #14.3/a:2449,2446 spring green target p
    62236 
    62237 > color #14.3/a:2449,2501 spring green target p
    62238 
    62239 > volume #10.1 color black transparency 0.8
    62240 
    62241 > volume zone #10.1 nearAtoms #14.3/a:2449 & sidechain range 2
    62242 
    62243 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_ape.png height 600
    62244 > width 600 supersample 3
    62245 
    62246 > hide #!10.1 models
    62247 
    62248 > hide #!14.3 models
    62249 
    62250 > show #!10.2 models
    62251 
    62252 > volume #10.2 level 0.011000
    62253 
    62254 > show #!14.6 models
    62255 
    62256 > hide #14.6
    62257 
    62258 > color #14.6/a:2249-2252 sea green
    62259 
    62260 > color #14.6/a:2058-2066 cornflower blue
    62261 
    62262 > color #14.6/a:2445-2451 #FFDB66
    62263 
    62264 > color #14.6/a:2499-2506 lawn green
    62265 
    62266 > color #14.6/a:2449 hot pink target a
    62267 
    62268 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    62269 > a
    62270 
    62271 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    62272 
    62273 > ~show #14.6
    62274 
    62275 > ~hbonds #14.6
    62276 
    62277 > name to_show #14.6/a:2058-2065,2250-2252,2445-2451,2499-2506
    62278 
    62279 > show to_show
    62280 
    62281 > ~cartoon #14.6
    62282 
    62283 > cartoon to_show
    62284 
    62285 > transparency #14.6 60 target c
    62286 
    62287 > hbonds to_show & sidechain restrict both color white
    62288 
    62289 27 hydrogen bonds found 
    62290 
    62291 > color #14.6/a white target p
    62292 
    62293 > color #14.6/a:2449,2251 spring green target p
    62294 
    62295 > color #14.6/a:2449,2065 spring green target p
    62296 
    62297 > color #14.6/a:2449,2445 spring green target p
    62298 
    62299 > color #14.6/a:2449,2446 spring green target p
    62300 
    62301 > color #14.6/a:2449,2501 spring green target p
    62302 
    62303 > volume #10.2 color black transparency 0.8
    62304 
    62305 > volume zone #10.2 nearAtoms #14.6/a:2449 & sidechain range 2
    62306 
    62307 > show #!14.3 models
    62308 
    62309 > ~show #14.3
    62310 
    62311 > ~cartoon #14.3
    62312 
    62313 > show #14.3/a:2449
    62314 
    62315 > volume zone #10.2 nearAtoms (#14.6/a:2449 | #14.3/a:2449 ) & sidechain range 2
    62316 
    62317 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_pe.png height 600 width
    62318 > 600 supersample 3
    62319 
    62320 > hide #!10.2 models
    62321 
    62322 > hide #!14.6 models
    62323 
    62324 > hide #!14.3 models
    62325 
    62326 > show #!10.3 models
    62327 
    62328 > volume #10.3 level 0.011000
    62329 
    62330 > show #!14.10 models
    62331 
    62332 > hide #14.10
    62333 
    62334 > color #14.10/a:2249-2252 sea green
    62335 
    62336 > color #14.10/a:2058-2066 cornflower blue
    62337 
    62338 > color #14.10/a:2445-2451 #FFDB66
    62339 
    62340 > color #14.10/a:2499-2506 lawn green
    62341 
    62342 > color #14.10/a:2449 hot pink target a
    62343 
    62344 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    62345 > a
    62346 
    62347 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target
    62348 > a
    62349 
    62350 > ~show #14.10
    62351 
    62352 > ~hbonds #14.10
    62353 
    62354 > name to_show #14.10/a:2058-2065,2250-2252,2445-2451,2499-2506
    62355 
    62356 > show to_show
    62357 
    62358 > ~cartoon #14.10
    62359 
    62360 > cartoon to_show
    62361 
    62362 > transparency #14.10 60 target c
    62363 
    62364 > hbonds to_show & sidechain restrict both color white
    62365 
    62366 22 hydrogen bonds found 
    62367 
    62368 > color #14.10/a white target p
    62369 
    62370 > color #14.10/a:2449,2251 spring green target p
    62371 
    62372 > color #14.10/a:2449,2065 spring green target p
    62373 
    62374 > color #14.10/a:2449,2445 spring green target p
    62375 
    62376 > color #14.10/a:2449,2446 spring green target p
    62377 
    62378 > color #14.10/a:2449,2501 spring green target p
    62379 
    62380 > volume #10.3 color black transparency 0.8
    62381 
    62382 > volume zone #10.3 nearAtoms #14.10/a:2449 & sidechain range 2
    62383 
    62384 > show #!14.5 models
    62385 
    62386 > ~show #14.5
    62387 
    62388 > ~cartoon #14.5
    62389 
    62390 > show #14.5/a:2449
    62391 
    62392 > volume zone #10.3 nearAtoms (#14.10/a:2449 | #14.5/a:2449 ) & sidechain range 2
    62393 
    62394 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_e.png height 600 width
    62395 > 600 supersample 3
    62396 
    62397 > hide #!10.3 models
    62398 
    62399 > hide #!14.10 models
    62400 
    62401 > hide #!14.5 models
    62402 
    62403 > show #!12.10 models
    62404 
    62405 > volume #12.10 level 0.350000
    62406 
    62407 > show #!14.10 models
    62408 
    62409 > hide #14.10
    62410 
    62411 > color #14.10/a:2249-2252 sea green
    62412 
    62413 > color #14.10/a:2058-2066 cornflower blue
    62414 
    62415 > color #14.10/a:2445-2451 #FFDB66
    62416 
    62417 > color #14.10/a:2499-2506 lawn green
    62418 
    62419 > color #14.10/a:2449 hot pink target a
    62420 
    62421 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    62422 > a
    62423 
    62424 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target
    62425 > a
    62426 
    62427 > ~show #14.10
    62428 
    62429 > ~hbonds #14.10
    62430 
    62431 > name to_show #14.10/a:2058-2065,2250-2252,2445-2451,2499-2506
    62432 
    62433 > show to_show
    62434 
    62435 > ~cartoon #14.10
    62436 
    62437 > cartoon to_show
    62438 
    62439 > transparency #14.10 60 target c
    62440 
    62441 > hbonds to_show & sidechain restrict both color white
    62442 
    62443 22 hydrogen bonds found 
    62444 
    62445 > color #14.10/a white target p
    62446 
    62447 > color #14.10/a:2449,2251 spring green target p
    62448 
    62449 > color #14.10/a:2449,2065 spring green target p
    62450 
    62451 > color #14.10/a:2449,2445 spring green target p
    62452 
    62453 > color #14.10/a:2449,2446 spring green target p
    62454 
    62455 > color #14.10/a:2449,2501 spring green target p
    62456 
    62457 > volume #12.10 color black transparency 0.8
    62458 
    62459 > volume zone #12.10 nearAtoms #14.10/a:2449 & sidechain range 2
    62460 
    62461 > show #!14.4 models
    62462 
    62463 > ~show #14.4
    62464 
    62465 > ~cartoon #14.4
    62466 
    62467 > show #14.4/a:2449
    62468 
    62469 > volume zone #12.10 nearAtoms (#14.10/a:2449 | #14.4/a:2449 ) & sidechain range 2
    62470 
    62471 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J53_c0.png height 600
    62472 > width 600 supersample 3
    62473 
    62474 > hide #!12.10 models
    62475 
    62476 > hide #!14.10 models
    62477 
    62478 > hide #!14.4 models
    62479 
    62480 > show #!12.1 models
    62481 
    62482 > volume #12.1 level 0.350000
    62483 
    62484 > show #!14.1 models
    62485 
    62486 > hide #14.1
    62487 
    62488 > color #14.1/a:2249-2252 sea green
    62489 
    62490 > color #14.1/a:2058-2066 cornflower blue
    62491 
    62492 > color #14.1/a:2445-2451 #FFDB66
    62493 
    62494 > color #14.1/a:2499-2506 lawn green
    62495 
    62496 > color #14.1/a:2449 hot pink target a
    62497 
    62498 > color #14.1/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    62499 > a
    62500 
    62501 > color #14.1/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    62502 
    62503 > ~show #14.1
    62504 
    62505 > ~hbonds #14.1
    62506 
    62507 > name to_show #14.1/a:2058-2065,2250-2252,2445-2451,2499-2506
    62508 
    62509 > show to_show
    62510 
    62511 > ~cartoon #14.1
    62512 
    62513 > cartoon to_show
    62514 
    62515 > transparency #14.1 60 target c
    62516 
    62517 > hbonds to_show & sidechain restrict both color white
    62518 
    62519 23 hydrogen bonds found 
    62520 
    62521 > color #14.1/a white target p
    62522 
    62523 > color #14.1/a:2449,2251 spring green target p
    62524 
    62525 > color #14.1/a:2449,2065 spring green target p
    62526 
    62527 > color #14.1/a:2449,2445 spring green target p
    62528 
    62529 > color #14.1/a:2449,2446 spring green target p
    62530 
    62531 > color #14.1/a:2449,2501 spring green target p
    62532 
    62533 > volume #12.1 color black transparency 0.8
    62534 
    62535 > volume zone #12.1 nearAtoms #14.1/a:2449 & sidechain range 2
    62536 
    62537 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J54_c1.png height 600
    62538 > width 600 supersample 3
    62539 
    62540 > hide #!12.1 models
    62541 
    62542 > hide #!14.1 models
    62543 
    62544 > show #!12.2 models
    62545 
    62546 > volume #12.2 level 0.350000
    62547 
    62548 > show #!14.2 models
    62549 
    62550 > hide #14.2
    62551 
    62552 > color #14.2/a:2249-2252 sea green
    62553 
    62554 > color #14.2/a:2058-2066 cornflower blue
    62555 
    62556 > color #14.2/a:2445-2451 #FFDB66
    62557 
    62558 > color #14.2/a:2499-2506 lawn green
    62559 
    62560 > color #14.2/a:2449 hot pink target a
    62561 
    62562 > color #14.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    62563 > a
    62564 
    62565 > color #14.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    62566 
    62567 > ~show #14.2
    62568 
    62569 > ~hbonds #14.2
    62570 
    62571 > name to_show #14.2/a:2058-2065,2250-2252,2445-2451,2499-2506
    62572 
    62573 > show to_show
    62574 
    62575 > ~cartoon #14.2
    62576 
    62577 > cartoon to_show
    62578 
    62579 > transparency #14.2 60 target c
    62580 
    62581 > hbonds to_show & sidechain restrict both color white
    62582 
    62583 26 hydrogen bonds found 
    62584 
    62585 > color #14.2/a white target p
    62586 
    62587 > color #14.2/a:2449,2251 spring green target p
    62588 
    62589 > color #14.2/a:2449,2065 spring green target p
    62590 
    62591 > color #14.2/a:2449,2445 spring green target p
    62592 
    62593 > color #14.2/a:2449,2446 spring green target p
    62594 
    62595 > color #14.2/a:2449,2501 spring green target p
    62596 
    62597 > volume #12.2 color black transparency 0.8
    62598 
    62599 > volume zone #12.2 nearAtoms #14.2/a:2449 & sidechain range 2
    62600 
    62601 > show #!14.3 models
    62602 
    62603 > ~show #14.3
    62604 
    62605 > ~cartoon #14.3
    62606 
    62607 > show #14.3/a:2449
    62608 
    62609 > volume zone #12.2 nearAtoms (#14.2/a:2449 | #14.3/a:2449 ) & sidechain range 2
    62610 
    62611 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J55_c2.png height 600
    62612 > width 600 supersample 3
    62613 
    62614 > hide #!12.2 models
    62615 
    62616 > hide #!14.2 models
    62617 
    62618 > hide #!14.3 models
    62619 
    62620 > show #!12.3 models
    62621 
    62622 > volume #12.3 level 0.350000
    62623 
    62624 > show #!14.3 models
    62625 
    62626 > hide #14.3
    62627 
    62628 > color #14.3/a:2249-2252 sea green
    62629 
    62630 > color #14.3/a:2058-2066 cornflower blue
    62631 
    62632 > color #14.3/a:2445-2451 #FFDB66
    62633 
    62634 > color #14.3/a:2499-2506 lawn green
    62635 
    62636 > color #14.3/a:2449 hot pink target a
    62637 
    62638 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    62639 > a
    62640 
    62641 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    62642 
    62643 > ~show #14.3
    62644 
    62645 > ~hbonds #14.3
    62646 
    62647 > name to_show #14.3/a:2058-2065,2250-2252,2445-2451,2499-2506
    62648 
    62649 > show to_show
    62650 
    62651 > ~cartoon #14.3
    62652 
    62653 > cartoon to_show
    62654 
    62655 > transparency #14.3 60 target c
    62656 
    62657 > hbonds to_show & sidechain restrict both color white
    62658 
    62659 21 hydrogen bonds found 
    62660 
    62661 > color #14.3/a white target p
    62662 
    62663 > color #14.3/a:2449,2251 spring green target p
    62664 
    62665 > color #14.3/a:2449,2065 spring green target p
    62666 
    62667 > color #14.3/a:2449,2445 spring green target p
    62668 
    62669 > color #14.3/a:2449,2446 spring green target p
    62670 
    62671 > color #14.3/a:2449,2501 spring green target p
    62672 
    62673 > volume #12.3 color black transparency 0.8
    62674 
    62675 > volume zone #12.3 nearAtoms #14.3/a:2449 & sidechain range 2
    62676 
    62677 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J56_c3.png height 600
    62678 > width 600 supersample 3
    62679 
    62680 > hide #!12.3 models
    62681 
    62682 > hide #!14.3 models
    62683 
    62684 > show #!12.4 models
    62685 
    62686 > volume #12.4 level 0.350000
    62687 
    62688 > show #!14.4 models
    62689 
    62690 > hide #14.4
    62691 
    62692 > color #14.4/a:2249-2252 sea green
    62693 
    62694 > color #14.4/a:2058-2066 cornflower blue
    62695 
    62696 > color #14.4/a:2445-2451 #FFDB66
    62697 
    62698 > color #14.4/a:2499-2506 lawn green
    62699 
    62700 > color #14.4/a:2449 hot pink target a
    62701 
    62702 > color #14.4/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    62703 > a
    62704 
    62705 > color #14.4/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    62706 
    62707 > ~show #14.4
    62708 
    62709 > ~hbonds #14.4
    62710 
    62711 > name to_show #14.4/a:2058-2065,2250-2252,2445-2451,2499-2506
    62712 
    62713 > show to_show
    62714 
    62715 > ~cartoon #14.4
    62716 
    62717 > cartoon to_show
    62718 
    62719 > transparency #14.4 60 target c
    62720 
    62721 > hbonds to_show & sidechain restrict both color white
    62722 
    62723 22 hydrogen bonds found 
    62724 
    62725 > color #14.4/a white target p
    62726 
    62727 > color #14.4/a:2449,2251 spring green target p
    62728 
    62729 > color #14.4/a:2449,2065 spring green target p
    62730 
    62731 > color #14.4/a:2449,2445 spring green target p
    62732 
    62733 > color #14.4/a:2449,2446 spring green target p
    62734 
    62735 > color #14.4/a:2449,2501 spring green target p
    62736 
    62737 > volume #12.4 color black transparency 0.8
    62738 
    62739 > volume zone #12.4 nearAtoms #14.4/a:2449 & sidechain range 2
    62740 
    62741 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J57_c4.png height 600
    62742 > width 600 supersample 3
    62743 
    62744 > hide #!12.4 models
    62745 
    62746 > hide #!14.4 models
    62747 
    62748 > show #!12.5 models
    62749 
    62750 > volume #12.5 level 0.350000
    62751 
    62752 > show #!14.5 models
    62753 
    62754 > hide #14.5
    62755 
    62756 > color #14.5/a:2249-2252 sea green
    62757 
    62758 > color #14.5/a:2058-2066 cornflower blue
    62759 
    62760 > color #14.5/a:2445-2451 #FFDB66
    62761 
    62762 > color #14.5/a:2499-2506 lawn green
    62763 
    62764 > color #14.5/a:2449 hot pink target a
    62765 
    62766 > color #14.5/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    62767 > a
    62768 
    62769 > color #14.5/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    62770 
    62771 > ~show #14.5
    62772 
    62773 > ~hbonds #14.5
    62774 
    62775 > name to_show #14.5/a:2058-2065,2250-2252,2445-2451,2499-2506
    62776 
    62777 > show to_show
    62778 
    62779 > ~cartoon #14.5
    62780 
    62781 > cartoon to_show
    62782 
    62783 > transparency #14.5 60 target c
    62784 
    62785 > hbonds to_show & sidechain restrict both color white
    62786 
    62787 20 hydrogen bonds found 
    62788 
    62789 > color #14.5/a white target p
    62790 
    62791 > color #14.5/a:2449,2251 spring green target p
    62792 
    62793 > color #14.5/a:2449,2065 spring green target p
    62794 
    62795 > color #14.5/a:2449,2445 spring green target p
    62796 
    62797 > color #14.5/a:2449,2446 spring green target p
    62798 
    62799 > color #14.5/a:2449,2501 spring green target p
    62800 
    62801 > volume #12.5 color black transparency 0.8
    62802 
    62803 > volume zone #12.5 nearAtoms #14.5/a:2449 & sidechain range 2
    62804 
    62805 > show #!14.3 models
    62806 
    62807 > ~show #14.3
    62808 
    62809 > ~cartoon #14.3
    62810 
    62811 > show #14.3/a:2449
    62812 
    62813 > volume zone #12.5 nearAtoms (#14.5/a:2449 | #14.3/a:2449 ) & sidechain range 2
    62814 
    62815 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J58_c5.png height 600
    62816 > width 600 supersample 3
    62817 
    62818 > hide #!12.5 models
    62819 
    62820 > hide #!14.5 models
    62821 
    62822 > hide #!14.3 models
    62823 
    62824 > show #!12.6 models
    62825 
    62826 > volume #12.6 level 0.350000
    62827 
    62828 > show #!14.6 models
    62829 
    62830 > hide #14.6
    62831 
    62832 > color #14.6/a:2249-2252 sea green
    62833 
    62834 > color #14.6/a:2058-2066 cornflower blue
    62835 
    62836 > color #14.6/a:2445-2451 #FFDB66
    62837 
    62838 > color #14.6/a:2499-2506 lawn green
    62839 
    62840 > color #14.6/a:2449 hot pink target a
    62841 
    62842 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    62843 > a
    62844 
    62845 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    62846 
    62847 > ~show #14.6
    62848 
    62849 > ~hbonds #14.6
    62850 
    62851 > name to_show #14.6/a:2058-2065,2250-2252,2445-2451,2499-2506
    62852 
    62853 > show to_show
    62854 
    62855 > ~cartoon #14.6
    62856 
    62857 > cartoon to_show
    62858 
    62859 > transparency #14.6 60 target c
    62860 
    62861 > hbonds to_show & sidechain restrict both color white
    62862 
    62863 27 hydrogen bonds found 
    62864 
    62865 > color #14.6/a white target p
    62866 
    62867 > color #14.6/a:2449,2251 spring green target p
    62868 
    62869 > color #14.6/a:2449,2065 spring green target p
    62870 
    62871 > color #14.6/a:2449,2445 spring green target p
    62872 
    62873 > color #14.6/a:2449,2446 spring green target p
    62874 
    62875 > color #14.6/a:2449,2501 spring green target p
    62876 
    62877 > volume #12.6 color black transparency 0.8
    62878 
    62879 > volume zone #12.6 nearAtoms #14.6/a:2449 & sidechain range 2
    62880 
    62881 > show #!14.3 models
    62882 
    62883 > ~show #14.3
    62884 
    62885 > ~cartoon #14.3
    62886 
    62887 > show #14.3/a:2449
    62888 
    62889 > volume zone #12.6 nearAtoms (#14.6/a:2449 | #14.3/a:2449 ) & sidechain range 2
    62890 
    62891 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J59_c6.png height 600
    62892 > width 600 supersample 3
    62893 
    62894 > hide #!12.6 models
    62895 
    62896 > hide #!14.6 models
    62897 
    62898 > hide #!14.3 models
    62899 
    62900 > show #!12.7 models
    62901 
    62902 > volume #12.7 level 0.350000
    62903 
    62904 > show #!14.7 models
    62905 
    62906 > hide #14.7
    62907 
    62908 > color #14.7/a:2249-2252 sea green
    62909 
    62910 > color #14.7/a:2058-2066 cornflower blue
    62911 
    62912 > color #14.7/a:2445-2451 #FFDB66
    62913 
    62914 > color #14.7/a:2499-2506 lawn green
    62915 
    62916 > color #14.7/a:2449 hot pink target a
    62917 
    62918 > color #14.7/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    62919 > a
    62920 
    62921 > color #14.7/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    62922 
    62923 > ~show #14.7
    62924 
    62925 > ~hbonds #14.7
    62926 
    62927 > name to_show #14.7/a:2058-2065,2250-2252,2445-2451,2499-2506
    62928 
    62929 > show to_show
    62930 
    62931 > ~cartoon #14.7
    62932 
    62933 > cartoon to_show
    62934 
    62935 > transparency #14.7 60 target c
    62936 
    62937 > hbonds to_show & sidechain restrict both color white
    62938 
    62939 24 hydrogen bonds found 
    62940 
    62941 > color #14.7/a white target p
    62942 
    62943 > color #14.7/a:2449,2251 spring green target p
    62944 
    62945 > color #14.7/a:2449,2065 spring green target p
    62946 
    62947 > color #14.7/a:2449,2445 spring green target p
    62948 
    62949 > color #14.7/a:2449,2446 spring green target p
    62950 
    62951 > color #14.7/a:2449,2501 spring green target p
    62952 
    62953 > volume #12.7 color black transparency 0.8
    62954 
    62955 > volume zone #12.7 nearAtoms #14.7/a:2449 & sidechain range 2
    62956 
    62957 > show #!14.4 models
    62958 
    62959 > ~show #14.4
    62960 
    62961 > ~cartoon #14.4
    62962 
    62963 > show #14.4/a:2449
    62964 
    62965 > volume zone #12.7 nearAtoms (#14.7/a:2449 | #14.4/a:2449 ) & sidechain range 2
    62966 
    62967 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J60_c7.png height 600
    62968 > width 600 supersample 3
    62969 
    62970 > hide #!12.7 models
    62971 
    62972 > hide #!14.7 models
    62973 
    62974 > hide #!14.4 models
    62975 
    62976 > show #!12.8 models
    62977 
    62978 > volume #12.8 level 0.350000
    62979 
    62980 > show #!14.8 models
    62981 
    62982 > hide #14.8
    62983 
    62984 > color #14.8/a:2249-2252 sea green
    62985 
    62986 > color #14.8/a:2058-2066 cornflower blue
    62987 
    62988 > color #14.8/a:2445-2451 #FFDB66
    62989 
    62990 > color #14.8/a:2499-2506 lawn green
    62991 
    62992 > color #14.8/a:2449 hot pink target a
    62993 
    62994 > color #14.8/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    62995 > a
    62996 
    62997 > color #14.8/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    62998 
    62999 > ~show #14.8
    63000 
    63001 > ~hbonds #14.8
    63002 
    63003 > name to_show #14.8/a:2058-2065,2250-2252,2445-2451,2499-2506
    63004 
    63005 > show to_show
    63006 
    63007 > ~cartoon #14.8
    63008 
    63009 > cartoon to_show
    63010 
    63011 > transparency #14.8 60 target c
    63012 
    63013 > hbonds to_show & sidechain restrict both color white
    63014 
    63015 24 hydrogen bonds found 
    63016 
    63017 > color #14.8/a white target p
    63018 
    63019 > color #14.8/a:2449,2251 spring green target p
    63020 
    63021 > color #14.8/a:2449,2065 spring green target p
    63022 
    63023 > color #14.8/a:2449,2445 spring green target p
    63024 
    63025 > color #14.8/a:2449,2446 spring green target p
    63026 
    63027 > color #14.8/a:2449,2501 spring green target p
    63028 
    63029 > volume #12.8 color black transparency 0.8
    63030 
    63031 > volume zone #12.8 nearAtoms #14.8/a:2449 & sidechain range 2
    63032 
    63033 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J61_c8.png height 600
    63034 > width 600 supersample 3
    63035 
    63036 > hide #!12.8 models
    63037 
    63038 > hide #!14.8 models
    63039 
    63040 > show #!12.9 models
    63041 
    63042 > volume #12.9 level 0.350000
    63043 
    63044 > show #!14.9 models
    63045 
    63046 > hide #14.9
    63047 
    63048 > color #14.9/a:2249-2252 sea green
    63049 
    63050 > color #14.9/a:2058-2066 cornflower blue
    63051 
    63052 > color #14.9/a:2445-2451 #FFDB66
    63053 
    63054 > color #14.9/a:2499-2506 lawn green
    63055 
    63056 > color #14.9/a:2449 hot pink target a
    63057 
    63058 > color #14.9/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    63059 > a
    63060 
    63061 > color #14.9/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    63062 
    63063 > ~show #14.9
    63064 
    63065 > ~hbonds #14.9
    63066 
    63067 > name to_show #14.9/a:2058-2065,2250-2252,2445-2451,2499-2506
    63068 
    63069 > show to_show
    63070 
    63071 > ~cartoon #14.9
    63072 
    63073 > cartoon to_show
    63074 
    63075 > transparency #14.9 60 target c
    63076 
    63077 > hbonds to_show & sidechain restrict both color white
    63078 
    63079 27 hydrogen bonds found 
    63080 
    63081 > color #14.9/a white target p
    63082 
    63083 > color #14.9/a:2449,2251 spring green target p
    63084 
    63085 > color #14.9/a:2449,2065 spring green target p
    63086 
    63087 > color #14.9/a:2449,2445 spring green target p
    63088 
    63089 > color #14.9/a:2449,2446 spring green target p
    63090 
    63091 > color #14.9/a:2449,2501 spring green target p
    63092 
    63093 > volume #12.9 color black transparency 0.8
    63094 
    63095 > volume zone #12.9 nearAtoms #14.9/a:2449 & sidechain range 2
    63096 
    63097 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J62_c9.png height 600
    63098 > width 600 supersample 3
    63099 
    63100 > hide #!12.9 models
    63101 
    63102 > hide #!14.9 models
    63103 
    63104 > show #!21.1 models
    63105 
    63106 > volume #21.1 level 0.250000
    63107 
    63108 > show #!22.1 models
    63109 
    63110 > hide #22.1
    63111 
    63112 > color #22.1/a:2249-2252 sea green
    63113 
    63114 > color #22.1/a:2058-2066 cornflower blue
    63115 
    63116 > color #22.1/a:2445-2451 #FFDB66
    63117 
    63118 > color #22.1/a:2499-2506 lawn green
    63119 
    63120 > color #22.1/a:2449 hot pink target a
    63121 
    63122 > color #22.1/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    63123 > a
    63124 
    63125 > color #22.1/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    63126 
    63127 > ~show #22.1
    63128 
    63129 > ~hbonds #22.1
    63130 
    63131 > name to_show #22.1/a:2058-2065,2250-2252,2445-2451,2499-2506
    63132 
    63133 > show to_show
    63134 
    63135 > ~cartoon #22.1
    63136 
    63137 > cartoon to_show
    63138 
    63139 > transparency #22.1 60 target c
    63140 
    63141 > hbonds to_show & sidechain restrict both color white
    63142 
    63143 23 hydrogen bonds found 
    63144 
    63145 > color #22.1/a white target p
    63146 
    63147 > color #22.1/a:2449,2251 spring green target p
    63148 
    63149 > color #22.1/a:2449,2065 spring green target p
    63150 
    63151 > color #22.1/a:2449,2445 spring green target p
    63152 
    63153 > color #22.1/a:2449,2446 spring green target p
    63154 
    63155 > color #22.1/a:2449,2501 spring green target p
    63156 
    63157 > volume #21.1 color black transparency 0.8
    63158 
    63159 > volume zone #21.1 nearAtoms #22.1/a:2449 & sidechain range 2
    63160 
    63161 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J111_ape_sharp.png
    63162 > height 600 width 600 supersample 3
    63163 
    63164 > hide #!21.1 models
    63165 
    63166 > hide #!22.1 models
    63167 
    63168 > show #!23.10 models
    63169 
    63170 > volume #23.10 level 0.080000
    63171 
    63172 > show #!25.10 models
    63173 
    63174 > hide #25.10
    63175 
    63176 > color #25.10/a:2249-2252 sea green
    63177 
    63178 > color #25.10/a:2058-2066 cornflower blue
    63179 
    63180 > color #25.10/a:2445-2451 #FFDB66
    63181 
    63182 > color #25.10/a:2499-2506 lawn green
    63183 
    63184 > color #25.10/a:2449 hot pink target a
    63185 
    63186 > color #25.10/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    63187 > a
    63188 
    63189 > color #25.10/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target
    63190 > a
    63191 
    63192 > ~show #25.10
    63193 
    63194 > ~hbonds #25.10
    63195 
    63196 > name to_show #25.10/a:2058-2065,2250-2252,2445-2451,2499-2506
    63197 
    63198 > show to_show
    63199 
    63200 > ~cartoon #25.10
    63201 
    63202 > cartoon to_show
    63203 
    63204 > transparency #25.10 60 target c
    63205 
    63206 > hbonds to_show & sidechain restrict both color white
    63207 
    63208 26 hydrogen bonds found 
    63209 
    63210 > color #25.10/a white target p
    63211 
    63212 > color #25.10/a:2449,2251 spring green target p
    63213 
    63214 > color #25.10/a:2449,2065 spring green target p
    63215 
    63216 > color #25.10/a:2449,2445 spring green target p
    63217 
    63218 > color #25.10/a:2449,2446 spring green target p
    63219 
    63220 > color #25.10/a:2449,2501 spring green target p
    63221 
    63222 > volume #23.10 color black transparency 0.8
    63223 
    63224 > volume zone #23.10 nearAtoms #25.10/a:2449 & sidechain range 2
    63225 
    63226 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J239_c0.png height 600
    63227 > width 600 supersample 3
    63228 
    63229 > hide #!23.10 models
    63230 
    63231 > hide #!25.10 models
    63232 
    63233 > show #!23.1 models
    63234 
    63235 > volume #23.1 level 0.080000
    63236 
    63237 > show #!25.1 models
    63238 
    63239 > hide #25.1
    63240 
    63241 > color #25.1/a:2249-2252 sea green
    63242 
    63243 > color #25.1/a:2058-2066 cornflower blue
    63244 
    63245 > color #25.1/a:2445-2451 #FFDB66
    63246 
    63247 > color #25.1/a:2499-2506 lawn green
    63248 
    63249 > color #25.1/a:2449 hot pink target a
    63250 
    63251 > color #25.1/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    63252 > a
    63253 
    63254 > color #25.1/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    63255 
    63256 > ~show #25.1
    63257 
    63258 > ~hbonds #25.1
    63259 
    63260 > name to_show #25.1/a:2058-2065,2250-2252,2445-2451,2499-2506
    63261 
    63262 > show to_show
    63263 
    63264 > ~cartoon #25.1
    63265 
    63266 > cartoon to_show
    63267 
    63268 > transparency #25.1 60 target c
    63269 
    63270 > hbonds to_show & sidechain restrict both color white
    63271 
    63272 26 hydrogen bonds found 
    63273 
    63274 > color #25.1/a white target p
    63275 
    63276 > color #25.1/a:2449,2251 spring green target p
    63277 
    63278 > color #25.1/a:2449,2065 spring green target p
    63279 
    63280 > color #25.1/a:2449,2445 spring green target p
    63281 
    63282 > color #25.1/a:2449,2446 spring green target p
    63283 
    63284 > color #25.1/a:2449,2501 spring green target p
    63285 
    63286 > volume #23.1 color black transparency 0.8
    63287 
    63288 > volume zone #23.1 nearAtoms #25.1/a:2449 & sidechain range 2
    63289 
    63290 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J240_c1.png height 600
    63291 > width 600 supersample 3
    63292 
    63293 > hide #!23.1 models
    63294 
    63295 > hide #!25.1 models
    63296 
    63297 > show #!23.2 models
    63298 
    63299 > volume #23.2 level 0.080000
    63300 
    63301 > show #!25.2 models
    63302 
    63303 > hide #25.2
    63304 
    63305 > color #25.2/a:2249-2252 sea green
    63306 
    63307 > color #25.2/a:2058-2066 cornflower blue
    63308 
    63309 > color #25.2/a:2445-2451 #FFDB66
    63310 
    63311 > color #25.2/a:2499-2506 lawn green
    63312 
    63313 > color #25.2/a:2449 hot pink target a
    63314 
    63315 > color #25.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    63316 > a
    63317 
    63318 > color #25.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    63319 
    63320 > ~show #25.2
    63321 
    63322 > ~hbonds #25.2
    63323 
    63324 > name to_show #25.2/a:2058-2065,2250-2252,2445-2451,2499-2506
    63325 
    63326 > show to_show
    63327 
    63328 > ~cartoon #25.2
    63329 
    63330 > cartoon to_show
    63331 
    63332 > transparency #25.2 60 target c
    63333 
    63334 > hbonds to_show & sidechain restrict both color white
    63335 
    63336 19 hydrogen bonds found 
    63337 
    63338 > color #25.2/a white target p
    63339 
    63340 > color #25.2/a:2449,2251 spring green target p
    63341 
    63342 > color #25.2/a:2449,2065 spring green target p
    63343 
    63344 > color #25.2/a:2449,2445 spring green target p
    63345 
    63346 > color #25.2/a:2449,2446 spring green target p
    63347 
    63348 > color #25.2/a:2449,2501 spring green target p
    63349 
    63350 > volume #23.2 color black transparency 0.8
    63351 
    63352 > volume zone #23.2 nearAtoms #25.2/a:2449 & sidechain range 2
    63353 
    63354 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J241_c2.png height 600
    63355 > width 600 supersample 3
    63356 
    63357 > hide #!23.2 models
    63358 
    63359 > hide #!25.2 models
    63360 
    63361 > show #!23.3 models
    63362 
    63363 > volume #23.3 level 0.080000
    63364 
    63365 > show #!25.3 models
    63366 
    63367 > hide #25.3
    63368 
    63369 > color #25.3/a:2249-2252 sea green
    63370 
    63371 > color #25.3/a:2058-2066 cornflower blue
    63372 
    63373 > color #25.3/a:2445-2451 #FFDB66
    63374 
    63375 > color #25.3/a:2499-2506 lawn green
    63376 
    63377 > color #25.3/a:2449 hot pink target a
    63378 
    63379 > color #25.3/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    63380 > a
    63381 
    63382 > color #25.3/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    63383 
    63384 > ~show #25.3
    63385 
    63386 > ~hbonds #25.3
    63387 
    63388 > name to_show #25.3/a:2058-2065,2250-2252,2445-2451,2499-2506
    63389 
    63390 > show to_show
    63391 
    63392 > ~cartoon #25.3
    63393 
    63394 > cartoon to_show
    63395 
    63396 > transparency #25.3 60 target c
    63397 
    63398 > hbonds to_show & sidechain restrict both color white
    63399 
    63400 24 hydrogen bonds found 
    63401 
    63402 > color #25.3/a white target p
    63403 
    63404 > color #25.3/a:2449,2251 spring green target p
    63405 
    63406 > color #25.3/a:2449,2065 spring green target p
    63407 
    63408 > color #25.3/a:2449,2445 spring green target p
    63409 
    63410 > color #25.3/a:2449,2446 spring green target p
    63411 
    63412 > color #25.3/a:2449,2501 spring green target p
    63413 
    63414 > volume #23.3 color black transparency 0.8
    63415 
    63416 > volume zone #23.3 nearAtoms #25.3/a:2449 & sidechain range 2
    63417 
    63418 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J242_c3.png height 600
    63419 > width 600 supersample 3
    63420 
    63421 > hide #!23.3 models
    63422 
    63423 > hide #!25.3 models
    63424 
    63425 > show #!23.4 models
    63426 
    63427 > volume #23.4 level 0.080000
    63428 
    63429 > show #!25.4 models
    63430 
    63431 > hide #25.4
    63432 
    63433 > color #25.4/a:2249-2252 sea green
    63434 
    63435 > color #25.4/a:2058-2066 cornflower blue
    63436 
    63437 > color #25.4/a:2445-2451 #FFDB66
    63438 
    63439 > color #25.4/a:2499-2506 lawn green
    63440 
    63441 > color #25.4/a:2449 hot pink target a
    63442 
    63443 > color #25.4/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    63444 > a
    63445 
    63446 > color #25.4/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    63447 
    63448 > ~show #25.4
    63449 
    63450 > ~hbonds #25.4
    63451 
    63452 > name to_show #25.4/a:2058-2065,2250-2252,2445-2451,2499-2506
    63453 
    63454 > show to_show
    63455 
    63456 > ~cartoon #25.4
    63457 
    63458 > cartoon to_show
    63459 
    63460 > transparency #25.4 60 target c
    63461 
    63462 > hbonds to_show & sidechain restrict both color white
    63463 
    63464 26 hydrogen bonds found 
    63465 
    63466 > color #25.4/a white target p
    63467 
    63468 > color #25.4/a:2449,2251 spring green target p
    63469 
    63470 > color #25.4/a:2449,2065 spring green target p
    63471 
    63472 > color #25.4/a:2449,2445 spring green target p
    63473 
    63474 > color #25.4/a:2449,2446 spring green target p
    63475 
    63476 > color #25.4/a:2449,2501 spring green target p
    63477 
    63478 > volume #23.4 color black transparency 0.8
    63479 
    63480 > volume zone #23.4 nearAtoms #25.4/a:2449 & sidechain range 2
    63481 
    63482 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J243_c4.png height 600
    63483 > width 600 supersample 3
    63484 
    63485 > hide #!23.4 models
    63486 
    63487 > hide #!25.4 models
    63488 
    63489 > show #!23.5 models
    63490 
    63491 > volume #23.5 level 0.080000
    63492 
    63493 > show #!25.5 models
    63494 
    63495 > hide #25.5
    63496 
    63497 > color #25.5/a:2249-2252 sea green
    63498 
    63499 > color #25.5/a:2058-2066 cornflower blue
    63500 
    63501 > color #25.5/a:2445-2451 #FFDB66
    63502 
    63503 > color #25.5/a:2499-2506 lawn green
    63504 
    63505 > color #25.5/a:2449 hot pink target a
    63506 
    63507 > color #25.5/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    63508 > a
    63509 
    63510 > color #25.5/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    63511 
    63512 > ~show #25.5
    63513 
    63514 > ~hbonds #25.5
    63515 
    63516 > name to_show #25.5/a:2058-2065,2250-2252,2445-2451,2499-2506
    63517 
    63518 > show to_show
    63519 
    63520 > ~cartoon #25.5
    63521 
    63522 > cartoon to_show
    63523 
    63524 > transparency #25.5 60 target c
    63525 
    63526 > hbonds to_show & sidechain restrict both color white
    63527 
    63528 26 hydrogen bonds found 
    63529 
    63530 > color #25.5/a white target p
    63531 
    63532 > color #25.5/a:2449,2251 spring green target p
    63533 
    63534 > color #25.5/a:2449,2065 spring green target p
    63535 
    63536 > color #25.5/a:2449,2445 spring green target p
    63537 
    63538 > color #25.5/a:2449,2446 spring green target p
    63539 
    63540 > color #25.5/a:2449,2501 spring green target p
    63541 
    63542 > volume #23.5 color black transparency 0.8
    63543 
    63544 > volume zone #23.5 nearAtoms #25.5/a:2449 & sidechain range 2
    63545 
    63546 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J244_c5.png height 600
    63547 > width 600 supersample 3
    63548 
    63549 > hide #!23.5 models
    63550 
    63551 > hide #!25.5 models
    63552 
    63553 > show #!23.6 models
    63554 
    63555 > volume #23.6 level 0.080000
    63556 
    63557 > show #!25.6 models
    63558 
    63559 > hide #25.6
    63560 
    63561 > color #25.6/a:2249-2252 sea green
    63562 
    63563 > color #25.6/a:2058-2066 cornflower blue
    63564 
    63565 > color #25.6/a:2445-2451 #FFDB66
    63566 
    63567 > color #25.6/a:2499-2506 lawn green
    63568 
    63569 > color #25.6/a:2449 hot pink target a
    63570 
    63571 > color #25.6/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    63572 > a
    63573 
    63574 > color #25.6/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    63575 
    63576 > ~show #25.6
    63577 
    63578 > ~hbonds #25.6
    63579 
    63580 > name to_show #25.6/a:2058-2065,2250-2252,2445-2451,2499-2506
    63581 
    63582 > show to_show
    63583 
    63584 > ~cartoon #25.6
    63585 
    63586 > cartoon to_show
    63587 
    63588 > transparency #25.6 60 target c
    63589 
    63590 > hbonds to_show & sidechain restrict both color white
    63591 
    63592 27 hydrogen bonds found 
    63593 
    63594 > color #25.6/a white target p
    63595 
    63596 > color #25.6/a:2449,2251 spring green target p
    63597 
    63598 > color #25.6/a:2449,2065 spring green target p
    63599 
    63600 > color #25.6/a:2449,2445 spring green target p
    63601 
    63602 > color #25.6/a:2449,2446 spring green target p
    63603 
    63604 > color #25.6/a:2449,2501 spring green target p
    63605 
    63606 > volume #23.6 color black transparency 0.8
    63607 
    63608 > volume zone #23.6 nearAtoms #25.6/a:2449 & sidechain range 2
    63609 
    63610 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J245_c6.png height 600
    63611 > width 600 supersample 3
    63612 
    63613 > hide #!23.6 models
    63614 
    63615 > hide #!25.6 models
    63616 
    63617 > show #!23.7 models
    63618 
    63619 > volume #23.7 level 0.080000
    63620 
    63621 > show #!25.7 models
    63622 
    63623 > hide #25.7
    63624 
    63625 > color #25.7/a:2249-2252 sea green
    63626 
    63627 > color #25.7/a:2058-2066 cornflower blue
    63628 
    63629 > color #25.7/a:2445-2451 #FFDB66
    63630 
    63631 > color #25.7/a:2499-2506 lawn green
    63632 
    63633 > color #25.7/a:2449 hot pink target a
    63634 
    63635 > color #25.7/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    63636 > a
    63637 
    63638 > color #25.7/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    63639 
    63640 > ~show #25.7
    63641 
    63642 > ~hbonds #25.7
    63643 
    63644 > name to_show #25.7/a:2058-2065,2250-2252,2445-2451,2499-2506
    63645 
    63646 > show to_show
    63647 
    63648 > ~cartoon #25.7
    63649 
    63650 > cartoon to_show
    63651 
    63652 > transparency #25.7 60 target c
    63653 
    63654 > hbonds to_show & sidechain restrict both color white
    63655 
    63656 24 hydrogen bonds found 
    63657 
    63658 > color #25.7/a white target p
    63659 
    63660 > color #25.7/a:2449,2251 spring green target p
    63661 
    63662 > color #25.7/a:2449,2065 spring green target p
    63663 
    63664 > color #25.7/a:2449,2445 spring green target p
    63665 
    63666 > color #25.7/a:2449,2446 spring green target p
    63667 
    63668 > color #25.7/a:2449,2501 spring green target p
    63669 
    63670 > volume #23.7 color black transparency 0.8
    63671 
    63672 > volume zone #23.7 nearAtoms #25.7/a:2449 & sidechain range 2
    63673 
    63674 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J246_c7.png height 600
    63675 > width 600 supersample 3
    63676 
    63677 > hide #!23.7 models
    63678 
    63679 > hide #!25.7 models
    63680 
    63681 > show #!23.8 models
    63682 
    63683 > volume #23.8 level 0.080000
    63684 
    63685 > show #!25.8 models
    63686 
    63687 > hide #25.8
    63688 
    63689 > color #25.8/a:2249-2252 sea green
    63690 
    63691 > color #25.8/a:2058-2066 cornflower blue
    63692 
    63693 > color #25.8/a:2445-2451 #FFDB66
    63694 
    63695 > color #25.8/a:2499-2506 lawn green
    63696 
    63697 > color #25.8/a:2449 hot pink target a
    63698 
    63699 > color #25.8/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    63700 > a
    63701 
    63702 > color #25.8/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    63703 
    63704 > ~show #25.8
    63705 
    63706 > ~hbonds #25.8
    63707 
    63708 > name to_show #25.8/a:2058-2065,2250-2252,2445-2451,2499-2506
    63709 
    63710 > show to_show
    63711 
    63712 > ~cartoon #25.8
    63713 
    63714 > cartoon to_show
    63715 
    63716 > transparency #25.8 60 target c
    63717 
    63718 > hbonds to_show & sidechain restrict both color white
    63719 
    63720 24 hydrogen bonds found 
    63721 
    63722 > color #25.8/a white target p
    63723 
    63724 > color #25.8/a:2449,2251 spring green target p
    63725 
    63726 > color #25.8/a:2449,2065 spring green target p
    63727 
    63728 > color #25.8/a:2449,2445 spring green target p
    63729 
    63730 > color #25.8/a:2449,2446 spring green target p
    63731 
    63732 > color #25.8/a:2449,2501 spring green target p
    63733 
    63734 > volume #23.8 color black transparency 0.8
    63735 
    63736 > volume zone #23.8 nearAtoms #25.8/a:2449 & sidechain range 2
    63737 
    63738 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J247_c8.png height 600
    63739 > width 600 supersample 3
    63740 
    63741 > hide #!23.8 models
    63742 
    63743 > hide #!25.8 models
    63744 
    63745 > show #!23.9 models
    63746 
    63747 > volume #23.9 level 0.080000
    63748 
    63749 > show #!25.9 models
    63750 
    63751 > hide #25.9
    63752 
    63753 > color #25.9/a:2249-2252 sea green
    63754 
    63755 > color #25.9/a:2058-2066 cornflower blue
    63756 
    63757 > color #25.9/a:2445-2451 #FFDB66
    63758 
    63759 > color #25.9/a:2499-2506 lawn green
    63760 
    63761 > color #25.9/a:2449 hot pink target a
    63762 
    63763 > color #25.9/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    63764 > a
    63765 
    63766 > color #25.9/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    63767 
    63768 > ~show #25.9
    63769 
    63770 > ~hbonds #25.9
    63771 
    63772 > name to_show #25.9/a:2058-2065,2250-2252,2445-2451,2499-2506
    63773 
    63774 > show to_show
    63775 
    63776 > ~cartoon #25.9
    63777 
    63778 > cartoon to_show
    63779 
    63780 > transparency #25.9 60 target c
    63781 
    63782 > hbonds to_show & sidechain restrict both color white
    63783 
    63784 25 hydrogen bonds found 
    63785 
    63786 > color #25.9/a white target p
    63787 
    63788 > color #25.9/a:2449,2251 spring green target p
    63789 
    63790 > color #25.9/a:2449,2065 spring green target p
    63791 
    63792 > color #25.9/a:2449,2445 spring green target p
    63793 
    63794 > color #25.9/a:2449,2446 spring green target p
    63795 
    63796 > color #25.9/a:2449,2501 spring green target p
    63797 
    63798 > volume #23.9 color black transparency 0.8
    63799 
    63800 > volume zone #23.9 nearAtoms #25.9/a:2449 & sidechain range 2
    63801 
    63802 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J248_c9.png height 600
    63803 > width 600 supersample 3
    63804 
    63805 > hide #!23.9 models
    63806 
    63807 > hide #!25.9 models
    63808 
    63809 > show #!23.9 models
    63810 
    63811 > volume #23.9 level 0.080000
    63812 
    63813 > show #!25.9 models
    63814 
    63815 > hide #25.9
    63816 
    63817 > color #25.9/a:2249-2252 sea green
    63818 
    63819 > color #25.9/a:2058-2066 cornflower blue
    63820 
    63821 > color #25.9/a:2445-2451 #FFDB66
    63822 
    63823 > color #25.9/a:2499-2506 lawn green
    63824 
    63825 > color #25.9/a:2449 hot pink target a
    63826 
    63827 > color #25.9/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    63828 > a
    63829 
    63830 > color #25.9/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    63831 
    63832 > ~show #25.9
    63833 
    63834 > ~hbonds #25.9
    63835 
    63836 > name to_show #25.9/a:2058-2065,2250-2252,2445-2451,2499-2506
    63837 
    63838 > show to_show
    63839 
    63840 > ~cartoon #25.9
    63841 
    63842 > cartoon to_show
    63843 
    63844 > transparency #25.9 60 target c
    63845 
    63846 > hbonds to_show & sidechain restrict both color white
    63847 
    63848 25 hydrogen bonds found 
    63849 
    63850 > color #25.9/a white target p
    63851 
    63852 > color #25.9/a:2449,2251 spring green target p
    63853 
    63854 > color #25.9/a:2449,2065 spring green target p
    63855 
    63856 > color #25.9/a:2449,2445 spring green target p
    63857 
    63858 > color #25.9/a:2449,2446 spring green target p
    63859 
    63860 > color #25.9/a:2449,2501 spring green target p
    63861 
    63862 > volume #23.9 color black transparency 0.8
    63863 
    63864 > volume zone #23.9 nearAtoms #25.9/a:2449 & sidechain range 2
    63865 
    63866 > name to_show #25.9/a:2058-2065,2250-2252,2445-2451,2499-2506
    63867 
    63868 > show to_show
    63869 
    63870 > cartoon suppressBackboneDisplay false
    63871 
    63872 > show #!23.9 models
    63873 
    63874 > volume #23.9 level 0.080000
    63875 
    63876 > show #!25.9 models
    63877 
    63878 > hide #25.9
    63879 
    63880 > color #25.9/a:2249-2252 sea green
    63881 
    63882 > color #25.9/a:2058-2066 cornflower blue
    63883 
    63884 > color #25.9/a:2445-2451 #FFDB66
    63885 
    63886 > color #25.9/a:2499-2506 lawn green
    63887 
    63888 > color #25.9/a:2449 hot pink target a
    63889 
    63890 > color #25.9/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    63891 > a
    63892 
    63893 > color #25.9/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    63894 
    63895 > ~show #25.9
    63896 
    63897 > ~hbonds #25.9
    63898 
    63899 > name to_show #25.9/a:2058-2065,2250-2252,2445-2451,2499-2506
    63900 
    63901 > show to_show
    63902 
    63903 > ~cartoon #25.9
    63904 
    63905 > cartoon to_show
    63906 
    63907 > transparency #25.9 60 target c
    63908 
    63909 > hbonds to_show & sidechain restrict both color white
    63910 
    63911 25 hydrogen bonds found 
    63912 
    63913 > color #25.9/a white target p
    63914 
    63915 > color #25.9/a:2449,2251 spring green target p
    63916 
    63917 > color #25.9/a:2449,2065 spring green target p
    63918 
    63919 > color #25.9/a:2449,2445 spring green target p
    63920 
    63921 > color #25.9/a:2449,2446 spring green target p
    63922 
    63923 > color #25.9/a:2449,2501 spring green target p
    63924 
    63925 > volume #23.9 color black transparency 0.8
    63926 
    63927 > volume zone #23.9 nearAtoms #25.9/a:2449 & sidechain range 2
    63928 
    63929 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J248_c9.png height 600
    63930 > width 600 supersample 3
    63931 
    63932 > hide #!23.9 models
    63933 
    63934 > hide #!25.9 models
    63935 
    63936 > show #!10.1 models
    63937 
    63938 > volume #10.1 level 0.011000
    63939 
    63940 > show #!14.3 models
    63941 
    63942 > hide #14.3
    63943 
    63944 > color #14.3/a:2249-2252 sea green
    63945 
    63946 > color #14.3/a:2058-2066 cornflower blue
    63947 
    63948 > color #14.3/a:2445-2451 #FFDB66
    63949 
    63950 > color #14.3/a:2499-2506 lawn green
    63951 
    63952 > color #14.3/a:2449 hot pink target a
    63953 
    63954 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    63955 > a
    63956 
    63957 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    63958 
    63959 > ~show #14.3
    63960 
    63961 > ~hbonds #14.3
    63962 
    63963 > name to_show #14.3/a:2058-2065,2250-2252,2445-2451,2499-2506
    63964 
    63965 > show to_show
    63966 
    63967 > ~cartoon #14.3
    63968 
    63969 > cartoon to_show
    63970 
    63971 > transparency #14.3 60 target c
    63972 
    63973 > hbonds to_show & sidechain restrict both color white
    63974 
    63975 21 hydrogen bonds found 
    63976 
    63977 > color #14.3/a white target p
    63978 
    63979 > color #14.3/a:2449,2251 spring green target p
    63980 
    63981 > color #14.3/a:2449,2065 spring green target p
    63982 
    63983 > color #14.3/a:2449,2445 spring green target p
    63984 
    63985 > color #14.3/a:2449,2446 spring green target p
    63986 
    63987 > color #14.3/a:2449,2501 spring green target p
    63988 
    63989 > volume #10.1 color black transparency 0.8
    63990 
    63991 > volume zone #10.1 nearAtoms #14.3/a:2449 & sidechain range 2
    63992 
    63993 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_ape.png height 600
    63994 > width 600 supersample 3
    63995 
    63996 > hide #!10.1 models
    63997 
    63998 > hide #!14.3 models
    63999 
    64000 > show #!10.2 models
    64001 
    64002 > volume #10.2 level 0.011000
    64003 
    64004 > show #!14.6 models
    64005 
    64006 > hide #14.6
    64007 
    64008 > color #14.6/a:2249-2252 sea green
    64009 
    64010 > color #14.6/a:2058-2066 cornflower blue
    64011 
    64012 > color #14.6/a:2445-2451 #FFDB66
    64013 
    64014 > color #14.6/a:2499-2506 lawn green
    64015 
    64016 > color #14.6/a:2449 hot pink target a
    64017 
    64018 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    64019 > a
    64020 
    64021 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    64022 
    64023 > ~show #14.6
    64024 
    64025 > ~hbonds #14.6
    64026 
    64027 > name to_show #14.6/a:2058-2065,2250-2252,2445-2451,2499-2506
    64028 
    64029 > show to_show
    64030 
    64031 > ~cartoon #14.6
    64032 
    64033 > cartoon to_show
    64034 
    64035 > transparency #14.6 60 target c
    64036 
    64037 > hbonds to_show & sidechain restrict both color white
    64038 
    64039 27 hydrogen bonds found 
    64040 
    64041 > color #14.6/a white target p
    64042 
    64043 > color #14.6/a:2449,2251 spring green target p
    64044 
    64045 > color #14.6/a:2449,2065 spring green target p
    64046 
    64047 > color #14.6/a:2449,2445 spring green target p
    64048 
    64049 > color #14.6/a:2449,2446 spring green target p
    64050 
    64051 > color #14.6/a:2449,2501 spring green target p
    64052 
    64053 > volume #10.2 color black transparency 0.8
    64054 
    64055 > volume zone #10.2 nearAtoms #14.6/a:2449 & sidechain range 2
    64056 
    64057 > show #!14.3 models
    64058 
    64059 > ~show #14.3
    64060 
    64061 > ~cartoon #14.3
    64062 
    64063 > show #14.3/a:2449
    64064 
    64065 > volume zone #10.2 nearAtoms (#14.6/a:2449 | #14.3/a:2449 ) & sidechain range 2
    64066 
    64067 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_pe.png height 600 width
    64068 > 600 supersample 3
    64069 
    64070 > hide #!10.2 models
    64071 
    64072 > hide #!14.6 models
    64073 
    64074 > hide #!14.3 models
    64075 
    64076 > show #!10.3 models
    64077 
    64078 > volume #10.3 level 0.011000
    64079 
    64080 > show #!14.10 models
    64081 
    64082 > hide #14.10
    64083 
    64084 > color #14.10/a:2249-2252 sea green
    64085 
    64086 > color #14.10/a:2058-2066 cornflower blue
    64087 
    64088 > color #14.10/a:2445-2451 #FFDB66
    64089 
    64090 > color #14.10/a:2499-2506 lawn green
    64091 
    64092 > color #14.10/a:2449 hot pink target a
    64093 
    64094 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    64095 > a
    64096 
    64097 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target
    64098 > a
    64099 
    64100 > ~show #14.10
    64101 
    64102 > ~hbonds #14.10
    64103 
    64104 > name to_show #14.10/a:2058-2065,2250-2252,2445-2451,2499-2506
    64105 
    64106 > show to_show
    64107 
    64108 > ~cartoon #14.10
    64109 
    64110 > cartoon to_show
    64111 
    64112 > transparency #14.10 60 target c
    64113 
    64114 > hbonds to_show & sidechain restrict both color white
    64115 
    64116 22 hydrogen bonds found 
    64117 
    64118 > color #14.10/a white target p
    64119 
    64120 > color #14.10/a:2449,2251 spring green target p
    64121 
    64122 > color #14.10/a:2449,2065 spring green target p
    64123 
    64124 > color #14.10/a:2449,2445 spring green target p
    64125 
    64126 > color #14.10/a:2449,2446 spring green target p
    64127 
    64128 > color #14.10/a:2449,2501 spring green target p
    64129 
    64130 > volume #10.3 color black transparency 0.8
    64131 
    64132 > volume zone #10.3 nearAtoms #14.10/a:2449 & sidechain range 2
    64133 
    64134 > show #!14.5 models
    64135 
    64136 > ~show #14.5
    64137 
    64138 > ~cartoon #14.5
    64139 
    64140 > show #14.5/a:2449
    64141 
    64142 > volume zone #10.3 nearAtoms (#14.10/a:2449 | #14.5/a:2449 ) & sidechain range 2
    64143 
    64144 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_e.png height 600 width
    64145 > 600 supersample 3
    64146 
    64147 > hide #!10.3 models
    64148 
    64149 > hide #!14.10 models
    64150 
    64151 > hide #!14.5 models
    64152 
    64153 > show #!12.10 models
    64154 
    64155 > volume #12.10 level 0.350000
    64156 
    64157 > show #!14.10 models
    64158 
    64159 > hide #14.10
    64160 
    64161 > color #14.10/a:2249-2252 sea green
    64162 
    64163 > color #14.10/a:2058-2066 cornflower blue
    64164 
    64165 > color #14.10/a:2445-2451 #FFDB66
    64166 
    64167 > color #14.10/a:2499-2506 lawn green
    64168 
    64169 > color #14.10/a:2449 hot pink target a
    64170 
    64171 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    64172 > a
    64173 
    64174 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target
    64175 > a
    64176 
    64177 > ~show #14.10
    64178 
    64179 > ~hbonds #14.10
    64180 
    64181 > name to_show #14.10/a:2058-2065,2250-2252,2445-2451,2499-2506
    64182 
    64183 > show to_show
    64184 
    64185 > ~cartoon #14.10
    64186 
    64187 > cartoon to_show
    64188 
    64189 > transparency #14.10 60 target c
    64190 
    64191 > hbonds to_show & sidechain restrict both color white
    64192 
    64193 22 hydrogen bonds found 
    64194 
    64195 > color #14.10/a white target p
    64196 
    64197 > color #14.10/a:2449,2251 spring green target p
    64198 
    64199 > color #14.10/a:2449,2065 spring green target p
    64200 
    64201 > color #14.10/a:2449,2445 spring green target p
    64202 
    64203 > color #14.10/a:2449,2446 spring green target p
    64204 
    64205 > color #14.10/a:2449,2501 spring green target p
    64206 
    64207 > volume #12.10 color black transparency 0.8
    64208 
    64209 > volume zone #12.10 nearAtoms #14.10/a:2449 & sidechain range 2
    64210 
    64211 > show #!14.4 models
    64212 
    64213 > ~show #14.4
    64214 
    64215 > ~cartoon #14.4
    64216 
    64217 > show #14.4/a:2449
    64218 
    64219 > volume zone #12.10 nearAtoms (#14.10/a:2449 | #14.4/a:2449 ) & sidechain range 2
    64220 
    64221 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J53_c0.png height 600
    64222 > width 600 supersample 3
    64223 
    64224 > hide #!12.10 models
    64225 
    64226 > hide #!14.10 models
    64227 
    64228 > hide #!14.4 models
    64229 
    64230 > show #!12.1 models
    64231 
    64232 > volume #12.1 level 0.350000
    64233 
    64234 > show #!14.1 models
    64235 
    64236 > hide #14.1
    64237 
    64238 > color #14.1/a:2249-2252 sea green
    64239 
    64240 > color #14.1/a:2058-2066 cornflower blue
    64241 
    64242 > color #14.1/a:2445-2451 #FFDB66
    64243 
    64244 > color #14.1/a:2499-2506 lawn green
    64245 
    64246 > color #14.1/a:2449 hot pink target a
    64247 
    64248 > color #14.1/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    64249 > a
    64250 
    64251 > color #14.1/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    64252 
    64253 > ~show #14.1
    64254 
    64255 > ~hbonds #14.1
    64256 
    64257 > name to_show #14.1/a:2058-2065,2250-2252,2445-2451,2499-2506
    64258 
    64259 > show to_show
    64260 
    64261 > ~cartoon #14.1
    64262 
    64263 > cartoon to_show
    64264 
    64265 > transparency #14.1 60 target c
    64266 
    64267 > hbonds to_show & sidechain restrict both color white
    64268 
    64269 23 hydrogen bonds found 
    64270 
    64271 > color #14.1/a white target p
    64272 
    64273 > color #14.1/a:2449,2251 spring green target p
    64274 
    64275 > color #14.1/a:2449,2065 spring green target p
    64276 
    64277 > color #14.1/a:2449,2445 spring green target p
    64278 
    64279 > color #14.1/a:2449,2446 spring green target p
    64280 
    64281 > color #14.1/a:2449,2501 spring green target p
    64282 
    64283 > volume #12.1 color black transparency 0.8
    64284 
    64285 > volume zone #12.1 nearAtoms #14.1/a:2449 & sidechain range 2
    64286 
    64287 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J54_c1.png height 600
    64288 > width 600 supersample 3
    64289 
    64290 > hide #!12.1 models
    64291 
    64292 > hide #!14.1 models
    64293 
    64294 > show #!12.2 models
    64295 
    64296 > volume #12.2 level 0.350000
    64297 
    64298 > show #!14.2 models
    64299 
    64300 > hide #14.2
    64301 
    64302 > color #14.2/a:2249-2252 sea green
    64303 
    64304 > color #14.2/a:2058-2066 cornflower blue
    64305 
    64306 > color #14.2/a:2445-2451 #FFDB66
    64307 
    64308 > color #14.2/a:2499-2506 lawn green
    64309 
    64310 > color #14.2/a:2449 hot pink target a
    64311 
    64312 > color #14.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    64313 > a
    64314 
    64315 > color #14.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    64316 
    64317 > ~show #14.2
    64318 
    64319 > ~hbonds #14.2
    64320 
    64321 > name to_show #14.2/a:2058-2065,2250-2252,2445-2451,2499-2506
    64322 
    64323 > show to_show
    64324 
    64325 > ~cartoon #14.2
    64326 
    64327 > cartoon to_show
    64328 
    64329 > transparency #14.2 60 target c
    64330 
    64331 > hbonds to_show & sidechain restrict both color white
    64332 
    64333 26 hydrogen bonds found 
    64334 
    64335 > color #14.2/a white target p
    64336 
    64337 > color #14.2/a:2449,2251 spring green target p
    64338 
    64339 > color #14.2/a:2449,2065 spring green target p
    64340 
    64341 > color #14.2/a:2449,2445 spring green target p
    64342 
    64343 > color #14.2/a:2449,2446 spring green target p
    64344 
    64345 > color #14.2/a:2449,2501 spring green target p
    64346 
    64347 > volume #12.2 color black transparency 0.8
    64348 
    64349 > volume zone #12.2 nearAtoms #14.2/a:2449 & sidechain range 2
    64350 
    64351 > show #!14.3 models
    64352 
    64353 > ~show #14.3
    64354 
    64355 > ~cartoon #14.3
    64356 
    64357 > show #14.3/a:2449
    64358 
    64359 > volume zone #12.2 nearAtoms (#14.2/a:2449 | #14.3/a:2449 ) & sidechain range 2
    64360 
    64361 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J55_c2.png height 600
    64362 > width 600 supersample 3
    64363 
    64364 > hide #!12.2 models
    64365 
    64366 > hide #!14.2 models
    64367 
    64368 > hide #!14.3 models
    64369 
    64370 > show #!12.3 models
    64371 
    64372 > volume #12.3 level 0.350000
    64373 
    64374 > show #!14.3 models
    64375 
    64376 > hide #14.3
    64377 
    64378 > color #14.3/a:2249-2252 sea green
    64379 
    64380 > color #14.3/a:2058-2066 cornflower blue
    64381 
    64382 > color #14.3/a:2445-2451 #FFDB66
    64383 
    64384 > color #14.3/a:2499-2506 lawn green
    64385 
    64386 > color #14.3/a:2449 hot pink target a
    64387 
    64388 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    64389 > a
    64390 
    64391 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    64392 
    64393 > ~show #14.3
    64394 
    64395 > ~hbonds #14.3
    64396 
    64397 > name to_show #14.3/a:2058-2065,2250-2252,2445-2451,2499-2506
    64398 
    64399 > show to_show
    64400 
    64401 > ~cartoon #14.3
    64402 
    64403 > cartoon to_show
    64404 
    64405 > transparency #14.3 60 target c
    64406 
    64407 > hbonds to_show & sidechain restrict both color white
    64408 
    64409 21 hydrogen bonds found 
    64410 
    64411 > color #14.3/a white target p
    64412 
    64413 > color #14.3/a:2449,2251 spring green target p
    64414 
    64415 > color #14.3/a:2449,2065 spring green target p
    64416 
    64417 > color #14.3/a:2449,2445 spring green target p
    64418 
    64419 > color #14.3/a:2449,2446 spring green target p
    64420 
    64421 > color #14.3/a:2449,2501 spring green target p
    64422 
    64423 > volume #12.3 color black transparency 0.8
    64424 
    64425 > volume zone #12.3 nearAtoms #14.3/a:2449 & sidechain range 2
    64426 
    64427 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J56_c3.png height 600
    64428 > width 600 supersample 3
    64429 
    64430 > hide #!12.3 models
    64431 
    64432 > hide #!14.3 models
    64433 
    64434 > show #!12.4 models
    64435 
    64436 > volume #12.4 level 0.350000
    64437 
    64438 > show #!14.4 models
    64439 
    64440 > hide #14.4
    64441 
    64442 > color #14.4/a:2249-2252 sea green
    64443 
    64444 > color #14.4/a:2058-2066 cornflower blue
    64445 
    64446 > color #14.4/a:2445-2451 #FFDB66
    64447 
    64448 > color #14.4/a:2499-2506 lawn green
    64449 
    64450 > color #14.4/a:2449 hot pink target a
    64451 
    64452 > color #14.4/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    64453 > a
    64454 
    64455 > color #14.4/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    64456 
    64457 > ~show #14.4
    64458 
    64459 > ~hbonds #14.4
    64460 
    64461 > name to_show #14.4/a:2058-2065,2250-2252,2445-2451,2499-2506
    64462 
    64463 > show to_show
    64464 
    64465 > ~cartoon #14.4
    64466 
    64467 > cartoon to_show
    64468 
    64469 > transparency #14.4 60 target c
    64470 
    64471 > hbonds to_show & sidechain restrict both color white
    64472 
    64473 22 hydrogen bonds found 
    64474 
    64475 > color #14.4/a white target p
    64476 
    64477 > color #14.4/a:2449,2251 spring green target p
    64478 
    64479 > color #14.4/a:2449,2065 spring green target p
    64480 
    64481 > color #14.4/a:2449,2445 spring green target p
    64482 
    64483 > color #14.4/a:2449,2446 spring green target p
    64484 
    64485 > color #14.4/a:2449,2501 spring green target p
    64486 
    64487 > volume #12.4 color black transparency 0.8
    64488 
    64489 > volume zone #12.4 nearAtoms #14.4/a:2449 & sidechain range 2
    64490 
    64491 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J57_c4.png height 600
    64492 > width 600 supersample 3
    64493 
    64494 > hide #!12.4 models
    64495 
    64496 > hide #!14.4 models
    64497 
    64498 > show #!12.5 models
    64499 
    64500 > volume #12.5 level 0.350000
    64501 
    64502 > show #!14.5 models
    64503 
    64504 > hide #14.5
    64505 
    64506 > color #14.5/a:2249-2252 sea green
    64507 
    64508 > color #14.5/a:2058-2066 cornflower blue
    64509 
    64510 > color #14.5/a:2445-2451 #FFDB66
    64511 
    64512 > color #14.5/a:2499-2506 lawn green
    64513 
    64514 > color #14.5/a:2449 hot pink target a
    64515 
    64516 > color #14.5/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    64517 > a
    64518 
    64519 > color #14.5/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    64520 
    64521 > ~show #14.5
    64522 
    64523 > ~hbonds #14.5
    64524 
    64525 > name to_show #14.5/a:2058-2065,2250-2252,2445-2451,2499-2506
    64526 
    64527 > show to_show
    64528 
    64529 > ~cartoon #14.5
    64530 
    64531 > cartoon to_show
    64532 
    64533 > transparency #14.5 60 target c
    64534 
    64535 > hbonds to_show & sidechain restrict both color white
    64536 
    64537 20 hydrogen bonds found 
    64538 
    64539 > color #14.5/a white target p
    64540 
    64541 > color #14.5/a:2449,2251 spring green target p
    64542 
    64543 > color #14.5/a:2449,2065 spring green target p
    64544 
    64545 > color #14.5/a:2449,2445 spring green target p
    64546 
    64547 > color #14.5/a:2449,2446 spring green target p
    64548 
    64549 > color #14.5/a:2449,2501 spring green target p
    64550 
    64551 > volume #12.5 color black transparency 0.8
    64552 
    64553 > volume zone #12.5 nearAtoms #14.5/a:2449 & sidechain range 2
    64554 
    64555 > show #!14.3 models
    64556 
    64557 > ~show #14.3
    64558 
    64559 > ~cartoon #14.3
    64560 
    64561 > show #14.3/a:2449
    64562 
    64563 > volume zone #12.5 nearAtoms (#14.5/a:2449 | #14.3/a:2449 ) & sidechain range 2
    64564 
    64565 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J58_c5.png height 600
    64566 > width 600 supersample 3
    64567 
    64568 > hide #!12.5 models
    64569 
    64570 > hide #!14.5 models
    64571 
    64572 > hide #!14.3 models
    64573 
    64574 > show #!12.6 models
    64575 
    64576 > volume #12.6 level 0.350000
    64577 
    64578 > show #!14.6 models
    64579 
    64580 > hide #14.6
    64581 
    64582 > color #14.6/a:2249-2252 sea green
    64583 
    64584 > color #14.6/a:2058-2066 cornflower blue
    64585 
    64586 > color #14.6/a:2445-2451 #FFDB66
    64587 
    64588 > color #14.6/a:2499-2506 lawn green
    64589 
    64590 > color #14.6/a:2449 hot pink target a
    64591 
    64592 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    64593 > a
    64594 
    64595 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    64596 
    64597 > ~show #14.6
    64598 
    64599 > ~hbonds #14.6
    64600 
    64601 > name to_show #14.6/a:2058-2065,2250-2252,2445-2451,2499-2506
    64602 
    64603 > show to_show
    64604 
    64605 > ~cartoon #14.6
    64606 
    64607 > cartoon to_show
    64608 
    64609 > transparency #14.6 60 target c
    64610 
    64611 > hbonds to_show & sidechain restrict both color white
    64612 
    64613 27 hydrogen bonds found 
    64614 
    64615 > color #14.6/a white target p
    64616 
    64617 > color #14.6/a:2449,2251 spring green target p
    64618 
    64619 > color #14.6/a:2449,2065 spring green target p
    64620 
    64621 > color #14.6/a:2449,2445 spring green target p
    64622 
    64623 > color #14.6/a:2449,2446 spring green target p
    64624 
    64625 > color #14.6/a:2449,2501 spring green target p
    64626 
    64627 > volume #12.6 color black transparency 0.8
    64628 
    64629 > volume zone #12.6 nearAtoms #14.6/a:2449 & sidechain range 2
    64630 
    64631 > show #!14.3 models
    64632 
    64633 > ~show #14.3
    64634 
    64635 > ~cartoon #14.3
    64636 
    64637 > show #14.3/a:2449
    64638 
    64639 > volume zone #12.6 nearAtoms (#14.6/a:2449 | #14.3/a:2449 ) & sidechain range 2
    64640 
    64641 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J59_c6.png height 600
    64642 > width 600 supersample 3
    64643 
    64644 > hide #!12.6 models
    64645 
    64646 > hide #!14.6 models
    64647 
    64648 > hide #!14.3 models
    64649 
    64650 > show #!12.7 models
    64651 
    64652 > volume #12.7 level 0.350000
    64653 
    64654 > show #!14.7 models
    64655 
    64656 > hide #14.7
    64657 
    64658 > color #14.7/a:2249-2252 sea green
    64659 
    64660 > color #14.7/a:2058-2066 cornflower blue
    64661 
    64662 > color #14.7/a:2445-2451 #FFDB66
    64663 
    64664 > color #14.7/a:2499-2506 lawn green
    64665 
    64666 > color #14.7/a:2449 hot pink target a
    64667 
    64668 > color #14.7/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    64669 > a
    64670 
    64671 > color #14.7/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    64672 
    64673 > ~show #14.7
    64674 
    64675 > ~hbonds #14.7
    64676 
    64677 > name to_show #14.7/a:2058-2065,2250-2252,2445-2451,2499-2506
    64678 
    64679 > show to_show
    64680 
    64681 > ~cartoon #14.7
    64682 
    64683 > cartoon to_show
    64684 
    64685 > transparency #14.7 60 target c
    64686 
    64687 > hbonds to_show & sidechain restrict both color white
    64688 
    64689 24 hydrogen bonds found 
    64690 
    64691 > color #14.7/a white target p
    64692 
    64693 > color #14.7/a:2449,2251 spring green target p
    64694 
    64695 > color #14.7/a:2449,2065 spring green target p
    64696 
    64697 > color #14.7/a:2449,2445 spring green target p
    64698 
    64699 > color #14.7/a:2449,2446 spring green target p
    64700 
    64701 > color #14.7/a:2449,2501 spring green target p
    64702 
    64703 > volume #12.7 color black transparency 0.8
    64704 
    64705 > volume zone #12.7 nearAtoms #14.7/a:2449 & sidechain range 2
    64706 
    64707 > show #!14.4 models
    64708 
    64709 > ~show #14.4
    64710 
    64711 > ~cartoon #14.4
    64712 
    64713 > show #14.4/a:2449
    64714 
    64715 > volume zone #12.7 nearAtoms (#14.7/a:2449 | #14.4/a:2449 ) & sidechain range 2
    64716 
    64717 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J60_c7.png height 600
    64718 > width 600 supersample 3
    64719 
    64720 > hide #!12.7 models
    64721 
    64722 > hide #!14.7 models
    64723 
    64724 > hide #!14.4 models
    64725 
    64726 > show #!12.8 models
    64727 
    64728 > volume #12.8 level 0.350000
    64729 
    64730 > show #!14.8 models
    64731 
    64732 > hide #14.8
    64733 
    64734 > color #14.8/a:2249-2252 sea green
    64735 
    64736 > color #14.8/a:2058-2066 cornflower blue
    64737 
    64738 > color #14.8/a:2445-2451 #FFDB66
    64739 
    64740 > color #14.8/a:2499-2506 lawn green
    64741 
    64742 > color #14.8/a:2449 hot pink target a
    64743 
    64744 > color #14.8/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    64745 > a
    64746 
    64747 > color #14.8/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    64748 
    64749 > ~show #14.8
    64750 
    64751 > ~hbonds #14.8
    64752 
    64753 > name to_show #14.8/a:2058-2065,2250-2252,2445-2451,2499-2506
    64754 
    64755 > show to_show
    64756 
    64757 > ~cartoon #14.8
    64758 
    64759 > cartoon to_show
    64760 
    64761 > transparency #14.8 60 target c
    64762 
    64763 > hbonds to_show & sidechain restrict both color white
    64764 
    64765 24 hydrogen bonds found 
    64766 
    64767 > color #14.8/a white target p
    64768 
    64769 > color #14.8/a:2449,2251 spring green target p
    64770 
    64771 > color #14.8/a:2449,2065 spring green target p
    64772 
    64773 > color #14.8/a:2449,2445 spring green target p
    64774 
    64775 > color #14.8/a:2449,2446 spring green target p
    64776 
    64777 > color #14.8/a:2449,2501 spring green target p
    64778 
    64779 > volume #12.8 color black transparency 0.8
    64780 
    64781 > volume zone #12.8 nearAtoms #14.8/a:2449 & sidechain range 2
    64782 
    64783 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J61_c8.png height 600
    64784 > width 600 supersample 3
    64785 
    64786 > hide #!12.8 models
    64787 
    64788 > hide #!14.8 models
    64789 
    64790 > show #!12.9 models
    64791 
    64792 > volume #12.9 level 0.350000
    64793 
    64794 > show #!14.9 models
    64795 
    64796 > hide #14.9
    64797 
    64798 > color #14.9/a:2249-2252 sea green
    64799 
    64800 > color #14.9/a:2058-2066 cornflower blue
    64801 
    64802 > color #14.9/a:2445-2451 #FFDB66
    64803 
    64804 > color #14.9/a:2499-2506 lawn green
    64805 
    64806 > color #14.9/a:2449 hot pink target a
    64807 
    64808 > color #14.9/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    64809 > a
    64810 
    64811 > color #14.9/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    64812 
    64813 > ~show #14.9
    64814 
    64815 > ~hbonds #14.9
    64816 
    64817 > name to_show #14.9/a:2058-2065,2250-2252,2445-2451,2499-2506
    64818 
    64819 > show to_show
    64820 
    64821 > ~cartoon #14.9
    64822 
    64823 > cartoon to_show
    64824 
    64825 > transparency #14.9 60 target c
    64826 
    64827 > hbonds to_show & sidechain restrict both color white
    64828 
    64829 27 hydrogen bonds found 
    64830 
    64831 > color #14.9/a white target p
    64832 
    64833 > color #14.9/a:2449,2251 spring green target p
    64834 
    64835 > color #14.9/a:2449,2065 spring green target p
    64836 
    64837 > color #14.9/a:2449,2445 spring green target p
    64838 
    64839 > color #14.9/a:2449,2446 spring green target p
    64840 
    64841 > color #14.9/a:2449,2501 spring green target p
    64842 
    64843 > volume #12.9 color black transparency 0.8
    64844 
    64845 > volume zone #12.9 nearAtoms #14.9/a:2449 & sidechain range 2
    64846 
    64847 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J62_c9.png height 600
    64848 > width 600 supersample 3
    64849 
    64850 > hide #!12.9 models
    64851 
    64852 > hide #!14.9 models
    64853 
    64854 > cartoon tether opacity 0
    64855 
    64856 > cartoon tether scale 0
    64857 
    64858 > show #!10.1 models
    64859 
    64860 > volume #10.1 level 0.011000
    64861 
    64862 > show #!14.3 models
    64863 
    64864 > hide #14.3
    64865 
    64866 > color #14.3/a:2249-2252 sea green
    64867 
    64868 > color #14.3/a:2058-2066 cornflower blue
    64869 
    64870 > color #14.3/a:2445-2451 #FFDB66
    64871 
    64872 > color #14.3/a:2499-2506 lawn green
    64873 
    64874 > color #14.3/a:2449 hot pink target a
    64875 
    64876 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    64877 > a
    64878 
    64879 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    64880 
    64881 > ~show #14.3
    64882 
    64883 > ~hbonds #14.3
    64884 
    64885 > name to_show #14.3/a:2058-2065,2250-2252,2445-2451,2499-2506
    64886 
    64887 > show to_show
    64888 
    64889 > ~cartoon #14.3
    64890 
    64891 > cartoon to_show
    64892 
    64893 > transparency #14.3 60 target c
    64894 
    64895 > hbonds to_show & sidechain restrict both color white
    64896 
    64897 21 hydrogen bonds found 
    64898 
    64899 > color #14.3/a white target p
    64900 
    64901 > color #14.3/a:2449,2251 spring green target p
    64902 
    64903 > color #14.3/a:2449,2065 spring green target p
    64904 
    64905 > color #14.3/a:2449,2445 spring green target p
    64906 
    64907 > color #14.3/a:2449,2446 spring green target p
    64908 
    64909 > color #14.3/a:2449,2501 spring green target p
    64910 
    64911 > volume #10.1 color black transparency 0.8
    64912 
    64913 > volume zone #10.1 nearAtoms #14.3/a:2449 & sidechain range 2
    64914 
    64915 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_ape.png height 600
    64916 > width 600 supersample 3
    64917 
    64918 > hide #!10.1 models
    64919 
    64920 > hide #!14.3 models
    64921 
    64922 > show #!10.2 models
    64923 
    64924 > volume #10.2 level 0.011000
    64925 
    64926 > show #!14.6 models
    64927 
    64928 > hide #14.6
    64929 
    64930 > color #14.6/a:2249-2252 sea green
    64931 
    64932 > color #14.6/a:2058-2066 cornflower blue
    64933 
    64934 > color #14.6/a:2445-2451 #FFDB66
    64935 
    64936 > color #14.6/a:2499-2506 lawn green
    64937 
    64938 > color #14.6/a:2449 hot pink target a
    64939 
    64940 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    64941 > a
    64942 
    64943 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    64944 
    64945 > ~show #14.6
    64946 
    64947 > ~hbonds #14.6
    64948 
    64949 > name to_show #14.6/a:2058-2065,2250-2252,2445-2451,2499-2506
    64950 
    64951 > show to_show
    64952 
    64953 > ~cartoon #14.6
    64954 
    64955 > cartoon to_show
    64956 
    64957 > transparency #14.6 60 target c
    64958 
    64959 > hbonds to_show & sidechain restrict both color white
    64960 
    64961 27 hydrogen bonds found 
    64962 
    64963 > color #14.6/a white target p
    64964 
    64965 > color #14.6/a:2449,2251 spring green target p
    64966 
    64967 > color #14.6/a:2449,2065 spring green target p
    64968 
    64969 > color #14.6/a:2449,2445 spring green target p
    64970 
    64971 > color #14.6/a:2449,2446 spring green target p
    64972 
    64973 > color #14.6/a:2449,2501 spring green target p
    64974 
    64975 > volume #10.2 color black transparency 0.8
    64976 
    64977 > volume zone #10.2 nearAtoms #14.6/a:2449 & sidechain range 2
    64978 
    64979 > show #!14.3 models
    64980 
    64981 > ~show #14.3
    64982 
    64983 > ~cartoon #14.3
    64984 
    64985 > show #14.3/a:2449
    64986 
    64987 > volume zone #10.2 nearAtoms (#14.6/a:2449 | #14.3/a:2449 ) & sidechain range 2
    64988 
    64989 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_pe.png height 600 width
    64990 > 600 supersample 3
    64991 
    64992 > hide #!10.2 models
    64993 
    64994 > hide #!14.6 models
    64995 
    64996 > hide #!14.3 models
    64997 
    64998 > show #!10.3 models
    64999 
    65000 > volume #10.3 level 0.011000
    65001 
    65002 > show #!14.10 models
    65003 
    65004 > hide #14.10
    65005 
    65006 > color #14.10/a:2249-2252 sea green
    65007 
    65008 > color #14.10/a:2058-2066 cornflower blue
    65009 
    65010 > color #14.10/a:2445-2451 #FFDB66
    65011 
    65012 > color #14.10/a:2499-2506 lawn green
    65013 
    65014 > color #14.10/a:2449 hot pink target a
    65015 
    65016 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    65017 > a
    65018 
    65019 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target
    65020 > a
    65021 
    65022 > ~show #14.10
    65023 
    65024 > ~hbonds #14.10
    65025 
    65026 > name to_show #14.10/a:2058-2065,2250-2252,2445-2451,2499-2506
    65027 
    65028 > show to_show
    65029 
    65030 > ~cartoon #14.10
    65031 
    65032 > cartoon to_show
    65033 
    65034 > transparency #14.10 60 target c
    65035 
    65036 > hbonds to_show & sidechain restrict both color white
    65037 
    65038 22 hydrogen bonds found 
    65039 
    65040 > color #14.10/a white target p
    65041 
    65042 > color #14.10/a:2449,2251 spring green target p
    65043 
    65044 > color #14.10/a:2449,2065 spring green target p
    65045 
    65046 > color #14.10/a:2449,2445 spring green target p
    65047 
    65048 > color #14.10/a:2449,2446 spring green target p
    65049 
    65050 > color #14.10/a:2449,2501 spring green target p
    65051 
    65052 > volume #10.3 color black transparency 0.8
    65053 
    65054 > volume zone #10.3 nearAtoms #14.10/a:2449 & sidechain range 2
    65055 
    65056 > show #!14.5 models
    65057 
    65058 > ~show #14.5
    65059 
    65060 > ~cartoon #14.5
    65061 
    65062 > show #14.5/a:2449
    65063 
    65064 > volume zone #10.3 nearAtoms (#14.10/a:2449 | #14.5/a:2449 ) & sidechain range 2
    65065 
    65066 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_e.png height 600 width
    65067 > 600 supersample 3
    65068 
    65069 > hide #!10.3 models
    65070 
    65071 > hide #!14.10 models
    65072 
    65073 > hide #!14.5 models
    65074 
    65075 > show #!12.10 models
    65076 
    65077 > volume #12.10 level 0.350000
    65078 
    65079 > show #!14.10 models
    65080 
    65081 > hide #14.10
    65082 
    65083 > color #14.10/a:2249-2252 sea green
    65084 
    65085 > color #14.10/a:2058-2066 cornflower blue
    65086 
    65087 > color #14.10/a:2445-2451 #FFDB66
    65088 
    65089 > color #14.10/a:2499-2506 lawn green
    65090 
    65091 > color #14.10/a:2449 hot pink target a
    65092 
    65093 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    65094 > a
    65095 
    65096 > color #14.10/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target
    65097 > a
    65098 
    65099 > ~show #14.10
    65100 
    65101 > ~hbonds #14.10
    65102 
    65103 > name to_show #14.10/a:2058-2065,2250-2252,2445-2451,2499-2506
    65104 
    65105 > show to_show
    65106 
    65107 > ~cartoon #14.10
    65108 
    65109 > cartoon to_show
    65110 
    65111 > transparency #14.10 60 target c
    65112 
    65113 > hbonds to_show & sidechain restrict both color white
    65114 
    65115 22 hydrogen bonds found 
    65116 
    65117 > color #14.10/a white target p
    65118 
    65119 > color #14.10/a:2449,2251 spring green target p
    65120 
    65121 > color #14.10/a:2449,2065 spring green target p
    65122 
    65123 > color #14.10/a:2449,2445 spring green target p
    65124 
    65125 > color #14.10/a:2449,2446 spring green target p
    65126 
    65127 > color #14.10/a:2449,2501 spring green target p
    65128 
    65129 > volume #12.10 color black transparency 0.8
    65130 
    65131 > volume zone #12.10 nearAtoms #14.10/a:2449 & sidechain range 2
    65132 
    65133 > show #!14.4 models
    65134 
    65135 > ~show #14.4
    65136 
    65137 > ~cartoon #14.4
    65138 
    65139 > show #14.4/a:2449
    65140 
    65141 > volume zone #12.10 nearAtoms (#14.10/a:2449 | #14.4/a:2449 ) & sidechain range 2
    65142 
    65143 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J53_c0.png height 600
    65144 > width 600 supersample 3
    65145 
    65146 > hide #!12.10 models
    65147 
    65148 > hide #!14.10 models
    65149 
    65150 > hide #!14.4 models
    65151 
    65152 > show #!12.1 models
    65153 
    65154 > volume #12.1 level 0.350000
    65155 
    65156 > show #!14.1 models
    65157 
    65158 > hide #14.1
    65159 
    65160 > color #14.1/a:2249-2252 sea green
    65161 
    65162 > color #14.1/a:2058-2066 cornflower blue
    65163 
    65164 > color #14.1/a:2445-2451 #FFDB66
    65165 
    65166 > color #14.1/a:2499-2506 lawn green
    65167 
    65168 > color #14.1/a:2449 hot pink target a
    65169 
    65170 > color #14.1/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    65171 > a
    65172 
    65173 > color #14.1/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    65174 
    65175 > ~show #14.1
    65176 
    65177 > ~hbonds #14.1
    65178 
    65179 > name to_show #14.1/a:2058-2065,2250-2252,2445-2451,2499-2506
    65180 
    65181 > show to_show
    65182 
    65183 > ~cartoon #14.1
    65184 
    65185 > cartoon to_show
    65186 
    65187 > transparency #14.1 60 target c
    65188 
    65189 > hbonds to_show & sidechain restrict both color white
    65190 
    65191 23 hydrogen bonds found 
    65192 
    65193 > color #14.1/a white target p
    65194 
    65195 > color #14.1/a:2449,2251 spring green target p
    65196 
    65197 > color #14.1/a:2449,2065 spring green target p
    65198 
    65199 > color #14.1/a:2449,2445 spring green target p
    65200 
    65201 > color #14.1/a:2449,2446 spring green target p
    65202 
    65203 > color #14.1/a:2449,2501 spring green target p
    65204 
    65205 > volume #12.1 color black transparency 0.8
    65206 
    65207 > volume zone #12.1 nearAtoms #14.1/a:2449 & sidechain range 2
    65208 
    65209 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J54_c1.png height 600
    65210 > width 600 supersample 3
    65211 
    65212 > hide #!12.1 models
    65213 
    65214 > hide #!14.1 models
    65215 
    65216 > show #!12.2 models
    65217 
    65218 > volume #12.2 level 0.350000
    65219 
    65220 > show #!14.2 models
    65221 
    65222 > hide #14.2
    65223 
    65224 > color #14.2/a:2249-2252 sea green
    65225 
    65226 > color #14.2/a:2058-2066 cornflower blue
    65227 
    65228 > color #14.2/a:2445-2451 #FFDB66
    65229 
    65230 > color #14.2/a:2499-2506 lawn green
    65231 
    65232 > color #14.2/a:2449 hot pink target a
    65233 
    65234 > color #14.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    65235 > a
    65236 
    65237 > color #14.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    65238 
    65239 > ~show #14.2
    65240 
    65241 > ~hbonds #14.2
    65242 
    65243 > name to_show #14.2/a:2058-2065,2250-2252,2445-2451,2499-2506
    65244 
    65245 > show to_show
    65246 
    65247 > ~cartoon #14.2
    65248 
    65249 > cartoon to_show
    65250 
    65251 > transparency #14.2 60 target c
    65252 
    65253 > hbonds to_show & sidechain restrict both color white
    65254 
    65255 26 hydrogen bonds found 
    65256 
    65257 > color #14.2/a white target p
    65258 
    65259 > color #14.2/a:2449,2251 spring green target p
    65260 
    65261 > color #14.2/a:2449,2065 spring green target p
    65262 
    65263 > color #14.2/a:2449,2445 spring green target p
    65264 
    65265 > color #14.2/a:2449,2446 spring green target p
    65266 
    65267 > color #14.2/a:2449,2501 spring green target p
    65268 
    65269 > volume #12.2 color black transparency 0.8
    65270 
    65271 > volume zone #12.2 nearAtoms #14.2/a:2449 & sidechain range 2
    65272 
    65273 > show #!14.3 models
    65274 
    65275 > ~show #14.3
    65276 
    65277 > ~cartoon #14.3
    65278 
    65279 > show #14.3/a:2449
    65280 
    65281 > volume zone #12.2 nearAtoms (#14.2/a:2449 | #14.3/a:2449 ) & sidechain range 2
    65282 
    65283 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J55_c2.png height 600
    65284 > width 600 supersample 3
    65285 
    65286 > hide #!12.2 models
    65287 
    65288 > hide #!14.2 models
    65289 
    65290 > hide #!14.3 models
    65291 
    65292 > show #!12.3 models
    65293 
    65294 > volume #12.3 level 0.350000
    65295 
    65296 > show #!14.3 models
    65297 
    65298 > hide #14.3
    65299 
    65300 > color #14.3/a:2249-2252 sea green
    65301 
    65302 > color #14.3/a:2058-2066 cornflower blue
    65303 
    65304 > color #14.3/a:2445-2451 #FFDB66
    65305 
    65306 > color #14.3/a:2499-2506 lawn green
    65307 
    65308 > color #14.3/a:2449 hot pink target a
    65309 
    65310 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    65311 > a
    65312 
    65313 > color #14.3/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    65314 
    65315 > ~show #14.3
    65316 
    65317 > ~hbonds #14.3
    65318 
    65319 > name to_show #14.3/a:2058-2065,2250-2252,2445-2451,2499-2506
    65320 
    65321 > show to_show
    65322 
    65323 > ~cartoon #14.3
    65324 
    65325 > cartoon to_show
    65326 
    65327 > transparency #14.3 60 target c
    65328 
    65329 > hbonds to_show & sidechain restrict both color white
    65330 
    65331 21 hydrogen bonds found 
    65332 
    65333 > color #14.3/a white target p
    65334 
    65335 > color #14.3/a:2449,2251 spring green target p
    65336 
    65337 > color #14.3/a:2449,2065 spring green target p
    65338 
    65339 > color #14.3/a:2449,2445 spring green target p
    65340 
    65341 > color #14.3/a:2449,2446 spring green target p
    65342 
    65343 > color #14.3/a:2449,2501 spring green target p
    65344 
    65345 > volume #12.3 color black transparency 0.8
    65346 
    65347 > volume zone #12.3 nearAtoms #14.3/a:2449 & sidechain range 2
    65348 
    65349 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J56_c3.png height 600
    65350 > width 600 supersample 3
    65351 
    65352 > hide #!12.3 models
    65353 
    65354 > hide #!14.3 models
    65355 
    65356 > show #!12.4 models
    65357 
    65358 > volume #12.4 level 0.350000
    65359 
    65360 > show #!14.4 models
    65361 
    65362 > hide #14.4
    65363 
    65364 > color #14.4/a:2249-2252 sea green
    65365 
    65366 > color #14.4/a:2058-2066 cornflower blue
    65367 
    65368 > color #14.4/a:2445-2451 #FFDB66
    65369 
    65370 > color #14.4/a:2499-2506 lawn green
    65371 
    65372 > color #14.4/a:2449 hot pink target a
    65373 
    65374 > color #14.4/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    65375 > a
    65376 
    65377 > color #14.4/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    65378 
    65379 > ~show #14.4
    65380 
    65381 > ~hbonds #14.4
    65382 
    65383 > name to_show #14.4/a:2058-2065,2250-2252,2445-2451,2499-2506
    65384 
    65385 > show to_show
    65386 
    65387 > ~cartoon #14.4
    65388 
    65389 > cartoon to_show
    65390 
    65391 > transparency #14.4 60 target c
    65392 
    65393 > hbonds to_show & sidechain restrict both color white
    65394 
    65395 22 hydrogen bonds found 
    65396 
    65397 > color #14.4/a white target p
    65398 
    65399 > color #14.4/a:2449,2251 spring green target p
    65400 
    65401 > color #14.4/a:2449,2065 spring green target p
    65402 
    65403 > color #14.4/a:2449,2445 spring green target p
    65404 
    65405 > color #14.4/a:2449,2446 spring green target p
    65406 
    65407 > color #14.4/a:2449,2501 spring green target p
    65408 
    65409 > volume #12.4 color black transparency 0.8
    65410 
    65411 > volume zone #12.4 nearAtoms #14.4/a:2449 & sidechain range 2
    65412 
    65413 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J57_c4.png height 600
    65414 > width 600 supersample 3
    65415 
    65416 > hide #!12.4 models
    65417 
    65418 > hide #!14.4 models
    65419 
    65420 > show #!12.5 models
    65421 
    65422 > volume #12.5 level 0.350000
    65423 
    65424 > show #!14.5 models
    65425 
    65426 > hide #14.5
    65427 
    65428 > color #14.5/a:2249-2252 sea green
    65429 
    65430 > color #14.5/a:2058-2066 cornflower blue
    65431 
    65432 > color #14.5/a:2445-2451 #FFDB66
    65433 
    65434 > color #14.5/a:2499-2506 lawn green
    65435 
    65436 > color #14.5/a:2449 hot pink target a
    65437 
    65438 > color #14.5/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    65439 > a
    65440 
    65441 > color #14.5/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    65442 
    65443 > ~show #14.5
    65444 
    65445 > ~hbonds #14.5
    65446 
    65447 > name to_show #14.5/a:2058-2065,2250-2252,2445-2451,2499-2506
    65448 
    65449 > show to_show
    65450 
    65451 > ~cartoon #14.5
    65452 
    65453 > cartoon to_show
    65454 
    65455 > transparency #14.5 60 target c
    65456 
    65457 > hbonds to_show & sidechain restrict both color white
    65458 
    65459 20 hydrogen bonds found 
    65460 
    65461 > color #14.5/a white target p
    65462 
    65463 > color #14.5/a:2449,2251 spring green target p
    65464 
    65465 > color #14.5/a:2449,2065 spring green target p
    65466 
    65467 > color #14.5/a:2449,2445 spring green target p
    65468 
    65469 > color #14.5/a:2449,2446 spring green target p
    65470 
    65471 > color #14.5/a:2449,2501 spring green target p
    65472 
    65473 > volume #12.5 color black transparency 0.8
    65474 
    65475 > volume zone #12.5 nearAtoms #14.5/a:2449 & sidechain range 2
    65476 
    65477 > show #!14.3 models
    65478 
    65479 > ~show #14.3
    65480 
    65481 > ~cartoon #14.3
    65482 
    65483 > show #14.3/a:2449
    65484 
    65485 > volume zone #12.5 nearAtoms (#14.5/a:2449 | #14.3/a:2449 ) & sidechain range 2
    65486 
    65487 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J58_c5.png height 600
    65488 > width 600 supersample 3
    65489 
    65490 > hide #!12.5 models
    65491 
    65492 > hide #!14.5 models
    65493 
    65494 > hide #!14.3 models
    65495 
    65496 > show #!12.6 models
    65497 
    65498 > volume #12.6 level 0.350000
    65499 
    65500 > show #!14.6 models
    65501 
    65502 > hide #14.6
    65503 
    65504 > color #14.6/a:2249-2252 sea green
    65505 
    65506 > color #14.6/a:2058-2066 cornflower blue
    65507 
    65508 > color #14.6/a:2445-2451 #FFDB66
    65509 
    65510 > color #14.6/a:2499-2506 lawn green
    65511 
    65512 > color #14.6/a:2449 hot pink target a
    65513 
    65514 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    65515 > a
    65516 
    65517 > color #14.6/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    65518 
    65519 > ~show #14.6
    65520 
    65521 > ~hbonds #14.6
    65522 
    65523 > name to_show #14.6/a:2058-2065,2250-2252,2445-2451,2499-2506
    65524 
    65525 > show to_show
    65526 
    65527 > ~cartoon #14.6
    65528 
    65529 > cartoon to_show
    65530 
    65531 > transparency #14.6 60 target c
    65532 
    65533 > hbonds to_show & sidechain restrict both color white
    65534 
    65535 27 hydrogen bonds found 
    65536 
    65537 > color #14.6/a white target p
    65538 
    65539 > color #14.6/a:2449,2251 spring green target p
    65540 
    65541 > color #14.6/a:2449,2065 spring green target p
    65542 
    65543 > color #14.6/a:2449,2445 spring green target p
    65544 
    65545 > color #14.6/a:2449,2446 spring green target p
    65546 
    65547 > color #14.6/a:2449,2501 spring green target p
    65548 
    65549 > volume #12.6 color black transparency 0.8
    65550 
    65551 > volume zone #12.6 nearAtoms #14.6/a:2449 & sidechain range 2
    65552 
    65553 > show #!14.3 models
    65554 
    65555 > ~show #14.3
    65556 
    65557 > ~cartoon #14.3
    65558 
    65559 > show #14.3/a:2449
    65560 
    65561 > volume zone #12.6 nearAtoms (#14.6/a:2449 | #14.3/a:2449 ) & sidechain range 2
    65562 
    65563 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J59_c6.png height 600
    65564 > width 600 supersample 3
    65565 
    65566 > hide #!12.6 models
    65567 
    65568 > hide #!14.6 models
    65569 
    65570 > hide #!14.3 models
    65571 
    65572 > show #!12.7 models
    65573 
    65574 > volume #12.7 level 0.350000
    65575 
    65576 > show #!14.7 models
    65577 
    65578 > hide #14.7
    65579 
    65580 > color #14.7/a:2249-2252 sea green
    65581 
    65582 > color #14.7/a:2058-2066 cornflower blue
    65583 
    65584 > color #14.7/a:2445-2451 #FFDB66
    65585 
    65586 > color #14.7/a:2499-2506 lawn green
    65587 
    65588 > color #14.7/a:2449 hot pink target a
    65589 
    65590 > color #14.7/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    65591 > a
    65592 
    65593 > color #14.7/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    65594 
    65595 > ~show #14.7
    65596 
    65597 > ~hbonds #14.7
    65598 
    65599 > name to_show #14.7/a:2058-2065,2250-2252,2445-2451,2499-2506
    65600 
    65601 > show to_show
    65602 
    65603 > ~cartoon #14.7
    65604 
    65605 > cartoon to_show
    65606 
    65607 > transparency #14.7 60 target c
    65608 
    65609 > hbonds to_show & sidechain restrict both color white
    65610 
    65611 24 hydrogen bonds found 
    65612 
    65613 > color #14.7/a white target p
    65614 
    65615 > color #14.7/a:2449,2251 spring green target p
    65616 
    65617 > color #14.7/a:2449,2065 spring green target p
    65618 
    65619 > color #14.7/a:2449,2445 spring green target p
    65620 
    65621 > color #14.7/a:2449,2446 spring green target p
    65622 
    65623 > color #14.7/a:2449,2501 spring green target p
    65624 
    65625 > volume #12.7 color black transparency 0.8
    65626 
    65627 > volume zone #12.7 nearAtoms #14.7/a:2449 & sidechain range 2
    65628 
    65629 > show #!14.4 models
    65630 
    65631 > ~show #14.4
    65632 
    65633 > ~cartoon #14.4
    65634 
    65635 > show #14.4/a:2449
    65636 
    65637 > volume zone #12.7 nearAtoms (#14.7/a:2449 | #14.4/a:2449 ) & sidechain range 2
    65638 
    65639 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J60_c7.png height 600
    65640 > width 600 supersample 3
    65641 
    65642 > hide #!12.7 models
    65643 
    65644 > hide #!14.7 models
    65645 
    65646 > hide #!14.4 models
    65647 
    65648 > show #!12.8 models
    65649 
    65650 > volume #12.8 level 0.350000
    65651 
    65652 > show #!14.8 models
    65653 
    65654 > hide #14.8
    65655 
    65656 > color #14.8/a:2249-2252 sea green
    65657 
    65658 > color #14.8/a:2058-2066 cornflower blue
    65659 
    65660 > color #14.8/a:2445-2451 #FFDB66
    65661 
    65662 > color #14.8/a:2499-2506 lawn green
    65663 
    65664 > color #14.8/a:2449 hot pink target a
    65665 
    65666 > color #14.8/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    65667 > a
    65668 
    65669 > color #14.8/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    65670 
    65671 > ~show #14.8
    65672 
    65673 > ~hbonds #14.8
    65674 
    65675 > name to_show #14.8/a:2058-2065,2250-2252,2445-2451,2499-2506
    65676 
    65677 > show to_show
    65678 
    65679 > ~cartoon #14.8
    65680 
    65681 > cartoon to_show
    65682 
    65683 > transparency #14.8 60 target c
    65684 
    65685 > hbonds to_show & sidechain restrict both color white
    65686 
    65687 24 hydrogen bonds found 
    65688 
    65689 > color #14.8/a white target p
    65690 
    65691 > color #14.8/a:2449,2251 spring green target p
    65692 
    65693 > color #14.8/a:2449,2065 spring green target p
    65694 
    65695 > color #14.8/a:2449,2445 spring green target p
    65696 
    65697 > color #14.8/a:2449,2446 spring green target p
    65698 
    65699 > color #14.8/a:2449,2501 spring green target p
    65700 
    65701 > volume #12.8 color black transparency 0.8
    65702 
    65703 > volume zone #12.8 nearAtoms #14.8/a:2449 & sidechain range 2
    65704 
    65705 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J61_c8.png height 600
    65706 > width 600 supersample 3
    65707 
    65708 > hide #!12.8 models
    65709 
    65710 > hide #!14.8 models
    65711 
    65712 > show #!12.9 models
    65713 
    65714 > volume #12.9 level 0.350000
    65715 
    65716 > show #!14.9 models
    65717 
    65718 > hide #14.9
    65719 
    65720 > color #14.9/a:2249-2252 sea green
    65721 
    65722 > color #14.9/a:2058-2066 cornflower blue
    65723 
    65724 > color #14.9/a:2445-2451 #FFDB66
    65725 
    65726 > color #14.9/a:2499-2506 lawn green
    65727 
    65728 > color #14.9/a:2449 hot pink target a
    65729 
    65730 > color #14.9/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    65731 > a
    65732 
    65733 > color #14.9/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    65734 
    65735 > ~show #14.9
    65736 
    65737 > ~hbonds #14.9
    65738 
    65739 > name to_show #14.9/a:2058-2065,2250-2252,2445-2451,2499-2506
    65740 
    65741 > show to_show
    65742 
    65743 > ~cartoon #14.9
    65744 
    65745 > cartoon to_show
    65746 
    65747 > transparency #14.9 60 target c
    65748 
    65749 > hbonds to_show & sidechain restrict both color white
    65750 
    65751 27 hydrogen bonds found 
    65752 
    65753 > color #14.9/a white target p
    65754 
    65755 > color #14.9/a:2449,2251 spring green target p
    65756 
    65757 > color #14.9/a:2449,2065 spring green target p
    65758 
    65759 > color #14.9/a:2449,2445 spring green target p
    65760 
    65761 > color #14.9/a:2449,2446 spring green target p
    65762 
    65763 > color #14.9/a:2449,2501 spring green target p
    65764 
    65765 > volume #12.9 color black transparency 0.8
    65766 
    65767 > volume zone #12.9 nearAtoms #14.9/a:2449 & sidechain range 2
    65768 
    65769 > save /Users/dalar193/Desktop/D2449_new/D2449_new_d10_J62_c9.png height 600
    65770 > width 600 supersample 3
    65771 
    65772 > hide #!12.9 models
    65773 
    65774 > hide #!14.9 models
    65775 
    65776 > show #!21.1 models
    65777 
    65778 > volume #21.1 level 0.250000
    65779 
    65780 > show #!22.1 models
    65781 
    65782 > hide #22.1
    65783 
    65784 > color #22.1/a:2249-2252 sea green
    65785 
    65786 > color #22.1/a:2058-2066 cornflower blue
    65787 
    65788 > color #22.1/a:2445-2451 #FFDB66
    65789 
    65790 > color #22.1/a:2499-2506 lawn green
    65791 
    65792 > color #22.1/a:2449 hot pink target a
    65793 
    65794 > color #22.1/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    65795 > a
    65796 
    65797 > color #22.1/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    65798 
    65799 > ~show #22.1
    65800 
    65801 > ~hbonds #22.1
    65802 
    65803 > name to_show #22.1/a:2058-2065,2250-2252,2445-2451,2499-2506
    65804 
    65805 > show to_show
    65806 
    65807 > ~cartoon #22.1
    65808 
    65809 > cartoon to_show
    65810 
    65811 > transparency #22.1 60 target c
    65812 
    65813 > hbonds to_show & sidechain restrict both color white
    65814 
    65815 23 hydrogen bonds found 
    65816 
    65817 > color #22.1/a white target p
    65818 
    65819 > color #22.1/a:2449,2251 spring green target p
    65820 
    65821 > color #22.1/a:2449,2065 spring green target p
    65822 
    65823 > color #22.1/a:2449,2445 spring green target p
    65824 
    65825 > color #22.1/a:2449,2446 spring green target p
    65826 
    65827 > color #22.1/a:2449,2501 spring green target p
    65828 
    65829 > volume #21.1 color black transparency 0.8
    65830 
    65831 > volume zone #21.1 nearAtoms #22.1/a:2449 & sidechain range 2
    65832 
    65833 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J111_ape_sharp.png
    65834 > height 600 width 600 supersample 3
    65835 
    65836 > hide #!21.1 models
    65837 
    65838 > hide #!22.1 models
    65839 
    65840 > show #!21.2 models
    65841 
    65842 > volume #21.2 level 0.250000
    65843 
    65844 > show #!22.2 models
    65845 
    65846 > hide #22.2
    65847 
    65848 > color #22.2/a:2249-2252 sea green
    65849 
    65850 > color #22.2/a:2058-2066 cornflower blue
    65851 
    65852 > color #22.2/a:2445-2451 #FFDB66
    65853 
    65854 > color #22.2/a:2499-2506 lawn green
    65855 
    65856 > color #22.2/a:2449 hot pink target a
    65857 
    65858 > color #22.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    65859 > a
    65860 
    65861 > color #22.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    65862 
    65863 > ~show #22.2
    65864 
    65865 > ~hbonds #22.2
    65866 
    65867 > name to_show #22.2/a:2058-2065,2250-2252,2445-2451,2499-2506
    65868 
    65869 > show to_show
    65870 
    65871 > ~cartoon #22.2
    65872 
    65873 > cartoon to_show
    65874 
    65875 > transparency #22.2 60 target c
    65876 
    65877 > hbonds to_show & sidechain restrict both color white
    65878 
    65879 26 hydrogen bonds found 
    65880 
    65881 > color #22.2/a white target p
    65882 
    65883 > color #22.2/a:2449,2251 spring green target p
    65884 
    65885 > color #22.2/a:2449,2065 spring green target p
    65886 
    65887 > color #22.2/a:2449,2445 spring green target p
    65888 
    65889 > color #22.2/a:2449,2446 spring green target p
    65890 
    65891 > color #22.2/a:2449,2501 spring green target p
    65892 
    65893 > volume #21.2 color black transparency 0.8
    65894 
    65895 > volume zone #21.2 nearAtoms #22.2/a:2449 & sidechain range 2
    65896 
    65897 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J112_ap_sharp.png height
    65898 > 600 width 600 supersample 3
    65899 
    65900 > hide #!21.2 models
    65901 
    65902 > hide #!22.2 models
    65903 
    65904 > show #!21.3 models
    65905 
    65906 > volume #21.3 level 0.250000
    65907 
    65908 > show #!22.3 models
    65909 
    65910 > hide #22.3
    65911 
    65912 > color #22.3/a:2249-2252 sea green
    65913 
    65914 > color #22.3/a:2058-2066 cornflower blue
    65915 
    65916 > color #22.3/a:2445-2451 #FFDB66
    65917 
    65918 > color #22.3/a:2499-2506 lawn green
    65919 
    65920 > color #22.3/a:2449 hot pink target a
    65921 
    65922 > color #22.3/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    65923 > a
    65924 
    65925 > color #22.3/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    65926 
    65927 > ~show #22.3
    65928 
    65929 > ~hbonds #22.3
    65930 
    65931 > name to_show #22.3/a:2058-2065,2250-2252,2445-2451,2499-2506
    65932 
    65933 > show to_show
    65934 
    65935 > ~cartoon #22.3
    65936 
    65937 > cartoon to_show
    65938 
    65939 > transparency #22.3 60 target c
    65940 
    65941 > hbonds to_show & sidechain restrict both color white
    65942 
    65943 25 hydrogen bonds found 
    65944 
    65945 > color #22.3/a white target p
    65946 
    65947 > color #22.3/a:2449,2251 spring green target p
    65948 
    65949 > color #22.3/a:2449,2065 spring green target p
    65950 
    65951 > color #22.3/a:2449,2445 spring green target p
    65952 
    65953 > color #22.3/a:2449,2446 spring green target p
    65954 
    65955 > color #22.3/a:2449,2501 spring green target p
    65956 
    65957 > volume #21.3 color black transparency 0.8
    65958 
    65959 > volume zone #21.3 nearAtoms #22.3/a:2449 & sidechain range 2
    65960 
    65961 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J113_pe_sharp.png height
    65962 > 600 width 600 supersample 3
    65963 
    65964 > hide #!21.3 models
    65965 
    65966 > hide #!22.3 models
    65967 
    65968 > show #!21.4 models
    65969 
    65970 > volume #21.4 level 0.250000
    65971 
    65972 > show #!22.4 models
    65973 
    65974 > hide #22.4
    65975 
    65976 > color #22.4/a:2249-2252 sea green
    65977 
    65978 > color #22.4/a:2058-2066 cornflower blue
    65979 
    65980 > color #22.4/a:2445-2451 #FFDB66
    65981 
    65982 > color #22.4/a:2499-2506 lawn green
    65983 
    65984 > color #22.4/a:2449 hot pink target a
    65985 
    65986 > color #22.4/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    65987 > a
    65988 
    65989 > color #22.4/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    65990 
    65991 > ~show #22.4
    65992 
    65993 > ~hbonds #22.4
    65994 
    65995 > name to_show #22.4/a:2058-2065,2250-2252,2445-2451,2499-2506
    65996 
    65997 > show to_show
    65998 
    65999 > ~cartoon #22.4
    66000 
    66001 > cartoon to_show
    66002 
    66003 > transparency #22.4 60 target c
    66004 
    66005 > hbonds to_show & sidechain restrict both color white
    66006 
    66007 22 hydrogen bonds found 
    66008 
    66009 > color #22.4/a white target p
    66010 
    66011 > color #22.4/a:2449,2251 spring green target p
    66012 
    66013 > color #22.4/a:2449,2065 spring green target p
    66014 
    66015 > color #22.4/a:2449,2445 spring green target p
    66016 
    66017 > color #22.4/a:2449,2446 spring green target p
    66018 
    66019 > color #22.4/a:2449,2501 spring green target p
    66020 
    66021 > volume #21.4 color black transparency 0.8
    66022 
    66023 > volume zone #21.4 nearAtoms #22.4/a:2449 & sidechain range 2
    66024 
    66025 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J124_e_sharp.png height
    66026 > 600 width 600 supersample 3
    66027 
    66028 > hide #!21.4 models
    66029 
    66030 > hide #!22.4 models
    66031 
    66032 > show #!23.10 models
    66033 
    66034 > volume #23.10 level 0.080000
    66035 
    66036 > show #!25.10 models
    66037 
    66038 > hide #25.10
    66039 
    66040 > color #25.10/a:2249-2252 sea green
    66041 
    66042 > color #25.10/a:2058-2066 cornflower blue
    66043 
    66044 > color #25.10/a:2445-2451 #FFDB66
    66045 
    66046 > color #25.10/a:2499-2506 lawn green
    66047 
    66048 > color #25.10/a:2449 hot pink target a
    66049 
    66050 > color #25.10/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    66051 > a
    66052 
    66053 > color #25.10/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target
    66054 > a
    66055 
    66056 > ~show #25.10
    66057 
    66058 > ~hbonds #25.10
    66059 
    66060 > name to_show #25.10/a:2058-2065,2250-2252,2445-2451,2499-2506
    66061 
    66062 > show to_show
    66063 
    66064 > ~cartoon #25.10
    66065 
    66066 > cartoon to_show
    66067 
    66068 > transparency #25.10 60 target c
    66069 
    66070 > hbonds to_show & sidechain restrict both color white
    66071 
    66072 26 hydrogen bonds found 
    66073 
    66074 > color #25.10/a white target p
    66075 
    66076 > color #25.10/a:2449,2251 spring green target p
    66077 
    66078 > color #25.10/a:2449,2065 spring green target p
    66079 
    66080 > color #25.10/a:2449,2445 spring green target p
    66081 
    66082 > color #25.10/a:2449,2446 spring green target p
    66083 
    66084 > color #25.10/a:2449,2501 spring green target p
    66085 
    66086 > volume #23.10 color black transparency 0.8
    66087 
    66088 > volume zone #23.10 nearAtoms #25.10/a:2449 & sidechain range 2
    66089 
    66090 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J239_c0.png height 600
    66091 > width 600 supersample 3
    66092 
    66093 > hide #!23.10 models
    66094 
    66095 > hide #!25.10 models
    66096 
    66097 > show #!23.1 models
    66098 
    66099 > volume #23.1 level 0.080000
    66100 
    66101 > show #!25.1 models
    66102 
    66103 > hide #25.1
    66104 
    66105 > color #25.1/a:2249-2252 sea green
    66106 
    66107 > color #25.1/a:2058-2066 cornflower blue
    66108 
    66109 > color #25.1/a:2445-2451 #FFDB66
    66110 
    66111 > color #25.1/a:2499-2506 lawn green
    66112 
    66113 > color #25.1/a:2449 hot pink target a
    66114 
    66115 > color #25.1/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    66116 > a
    66117 
    66118 > color #25.1/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    66119 
    66120 > ~show #25.1
    66121 
    66122 > ~hbonds #25.1
    66123 
    66124 > name to_show #25.1/a:2058-2065,2250-2252,2445-2451,2499-2506
    66125 
    66126 > show to_show
    66127 
    66128 > ~cartoon #25.1
    66129 
    66130 > cartoon to_show
    66131 
    66132 > transparency #25.1 60 target c
    66133 
    66134 > hbonds to_show & sidechain restrict both color white
    66135 
    66136 26 hydrogen bonds found 
    66137 
    66138 > color #25.1/a white target p
    66139 
    66140 > color #25.1/a:2449,2251 spring green target p
    66141 
    66142 > color #25.1/a:2449,2065 spring green target p
    66143 
    66144 > color #25.1/a:2449,2445 spring green target p
    66145 
    66146 > color #25.1/a:2449,2446 spring green target p
    66147 
    66148 > color #25.1/a:2449,2501 spring green target p
    66149 
    66150 > volume #23.1 color black transparency 0.8
    66151 
    66152 > volume zone #23.1 nearAtoms #25.1/a:2449 & sidechain range 2
    66153 
    66154 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J240_c1.png height 600
    66155 > width 600 supersample 3
    66156 
    66157 > hide #!23.1 models
    66158 
    66159 > hide #!25.1 models
    66160 
    66161 > show #!23.2 models
    66162 
    66163 > volume #23.2 level 0.080000
    66164 
    66165 > show #!25.2 models
    66166 
    66167 > hide #25.2
    66168 
    66169 > color #25.2/a:2249-2252 sea green
    66170 
    66171 > color #25.2/a:2058-2066 cornflower blue
    66172 
    66173 > color #25.2/a:2445-2451 #FFDB66
    66174 
    66175 > color #25.2/a:2499-2506 lawn green
    66176 
    66177 > color #25.2/a:2449 hot pink target a
    66178 
    66179 > color #25.2/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    66180 > a
    66181 
    66182 > color #25.2/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    66183 
    66184 > ~show #25.2
    66185 
    66186 > ~hbonds #25.2
    66187 
    66188 > name to_show #25.2/a:2058-2065,2250-2252,2445-2451,2499-2506
    66189 
    66190 > show to_show
    66191 
    66192 > ~cartoon #25.2
    66193 
    66194 > cartoon to_show
    66195 
    66196 > transparency #25.2 60 target c
    66197 
    66198 > hbonds to_show & sidechain restrict both color white
    66199 
    66200 19 hydrogen bonds found 
    66201 
    66202 > color #25.2/a white target p
    66203 
    66204 > color #25.2/a:2449,2251 spring green target p
    66205 
    66206 > color #25.2/a:2449,2065 spring green target p
    66207 
    66208 > color #25.2/a:2449,2445 spring green target p
    66209 
    66210 > color #25.2/a:2449,2446 spring green target p
    66211 
    66212 > color #25.2/a:2449,2501 spring green target p
    66213 
    66214 > volume #23.2 color black transparency 0.8
    66215 
    66216 > volume zone #23.2 nearAtoms #25.2/a:2449 & sidechain range 2
    66217 
    66218 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J241_c2.png height 600
    66219 > width 600 supersample 3
    66220 
    66221 > hide #!23.2 models
    66222 
    66223 > hide #!25.2 models
    66224 
    66225 > show #!23.3 models
    66226 
    66227 > volume #23.3 level 0.080000
    66228 
    66229 > show #!25.3 models
    66230 
    66231 > hide #25.3
    66232 
    66233 > color #25.3/a:2249-2252 sea green
    66234 
    66235 > color #25.3/a:2058-2066 cornflower blue
    66236 
    66237 > color #25.3/a:2445-2451 #FFDB66
    66238 
    66239 > color #25.3/a:2499-2506 lawn green
    66240 
    66241 > color #25.3/a:2449 hot pink target a
    66242 
    66243 > color #25.3/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    66244 > a
    66245 
    66246 > color #25.3/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    66247 
    66248 > ~show #25.3
    66249 
    66250 > ~hbonds #25.3
    66251 
    66252 > name to_show #25.3/a:2058-2065,2250-2252,2445-2451,2499-2506
    66253 
    66254 > show to_show
    66255 
    66256 > ~cartoon #25.3
    66257 
    66258 > cartoon to_show
    66259 
    66260 > transparency #25.3 60 target c
    66261 
    66262 > hbonds to_show & sidechain restrict both color white
    66263 
    66264 24 hydrogen bonds found 
    66265 
    66266 > color #25.3/a white target p
    66267 
    66268 > color #25.3/a:2449,2251 spring green target p
    66269 
    66270 > color #25.3/a:2449,2065 spring green target p
    66271 
    66272 > color #25.3/a:2449,2445 spring green target p
    66273 
    66274 > color #25.3/a:2449,2446 spring green target p
    66275 
    66276 > color #25.3/a:2449,2501 spring green target p
    66277 
    66278 > volume #23.3 color black transparency 0.8
    66279 
    66280 > volume zone #23.3 nearAtoms #25.3/a:2449 & sidechain range 2
    66281 
    66282 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J242_c3.png height 600
    66283 > width 600 supersample 3
    66284 
    66285 > hide #!23.3 models
    66286 
    66287 > hide #!25.3 models
    66288 
    66289 > show #!23.4 models
    66290 
    66291 > volume #23.4 level 0.080000
    66292 
    66293 > show #!25.4 models
    66294 
    66295 > hide #25.4
    66296 
    66297 > color #25.4/a:2249-2252 sea green
    66298 
    66299 > color #25.4/a:2058-2066 cornflower blue
    66300 
    66301 > color #25.4/a:2445-2451 #FFDB66
    66302 
    66303 > color #25.4/a:2499-2506 lawn green
    66304 
    66305 > color #25.4/a:2449 hot pink target a
    66306 
    66307 > color #25.4/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    66308 > a
    66309 
    66310 > color #25.4/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    66311 
    66312 > ~show #25.4
    66313 
    66314 > ~hbonds #25.4
    66315 
    66316 > name to_show #25.4/a:2058-2065,2250-2252,2445-2451,2499-2506
    66317 
    66318 > show to_show
    66319 
    66320 > ~cartoon #25.4
    66321 
    66322 > cartoon to_show
    66323 
    66324 > transparency #25.4 60 target c
    66325 
    66326 > hbonds to_show & sidechain restrict both color white
    66327 
    66328 26 hydrogen bonds found 
    66329 
    66330 > color #25.4/a white target p
    66331 
    66332 > color #25.4/a:2449,2251 spring green target p
    66333 
    66334 > color #25.4/a:2449,2065 spring green target p
    66335 
    66336 > color #25.4/a:2449,2445 spring green target p
    66337 
    66338 > color #25.4/a:2449,2446 spring green target p
    66339 
    66340 > color #25.4/a:2449,2501 spring green target p
    66341 
    66342 > volume #23.4 color black transparency 0.8
    66343 
    66344 > volume zone #23.4 nearAtoms #25.4/a:2449 & sidechain range 2
    66345 
    66346 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J243_c4.png height 600
    66347 > width 600 supersample 3
    66348 
    66349 > hide #!23.4 models
    66350 
    66351 > hide #!25.4 models
    66352 
    66353 > show #!23.5 models
    66354 
    66355 > volume #23.5 level 0.080000
    66356 
    66357 > show #!25.5 models
    66358 
    66359 > hide #25.5
    66360 
    66361 > color #25.5/a:2249-2252 sea green
    66362 
    66363 > color #25.5/a:2058-2066 cornflower blue
    66364 
    66365 > color #25.5/a:2445-2451 #FFDB66
    66366 
    66367 > color #25.5/a:2499-2506 lawn green
    66368 
    66369 > color #25.5/a:2449 hot pink target a
    66370 
    66371 > color #25.5/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    66372 > a
    66373 
    66374 > color #25.5/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    66375 
    66376 > ~show #25.5
    66377 
    66378 > ~hbonds #25.5
    66379 
    66380 > name to_show #25.5/a:2058-2065,2250-2252,2445-2451,2499-2506
    66381 
    66382 > show to_show
    66383 
    66384 > ~cartoon #25.5
    66385 
    66386 > cartoon to_show
    66387 
    66388 > transparency #25.5 60 target c
    66389 
    66390 > hbonds to_show & sidechain restrict both color white
    66391 
    66392 26 hydrogen bonds found 
    66393 
    66394 > color #25.5/a white target p
    66395 
    66396 > color #25.5/a:2449,2251 spring green target p
    66397 
    66398 > color #25.5/a:2449,2065 spring green target p
    66399 
    66400 > color #25.5/a:2449,2445 spring green target p
    66401 
    66402 > color #25.5/a:2449,2446 spring green target p
    66403 
    66404 > color #25.5/a:2449,2501 spring green target p
    66405 
    66406 > volume #23.5 color black transparency 0.8
    66407 
    66408 > volume zone #23.5 nearAtoms #25.5/a:2449 & sidechain range 2
    66409 
    66410 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J244_c5.png height 600
    66411 > width 600 supersample 3
    66412 
    66413 > hide #!23.5 models
    66414 
    66415 > hide #!25.5 models
    66416 
    66417 > show #!23.6 models
    66418 
    66419 > volume #23.6 level 0.080000
    66420 
    66421 > show #!25.6 models
    66422 
    66423 > hide #25.6
    66424 
    66425 > color #25.6/a:2249-2252 sea green
    66426 
    66427 > color #25.6/a:2058-2066 cornflower blue
    66428 
    66429 > color #25.6/a:2445-2451 #FFDB66
    66430 
    66431 > color #25.6/a:2499-2506 lawn green
    66432 
    66433 > color #25.6/a:2449 hot pink target a
    66434 
    66435 > color #25.6/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    66436 > a
    66437 
    66438 > color #25.6/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    66439 
    66440 > ~show #25.6
    66441 
    66442 > ~hbonds #25.6
    66443 
    66444 > name to_show #25.6/a:2058-2065,2250-2252,2445-2451,2499-2506
    66445 
    66446 > show to_show
    66447 
    66448 > ~cartoon #25.6
    66449 
    66450 > cartoon to_show
    66451 
    66452 > transparency #25.6 60 target c
    66453 
    66454 > hbonds to_show & sidechain restrict both color white
    66455 
    66456 27 hydrogen bonds found 
    66457 
    66458 > color #25.6/a white target p
    66459 
    66460 > color #25.6/a:2449,2251 spring green target p
    66461 
    66462 > color #25.6/a:2449,2065 spring green target p
    66463 
    66464 > color #25.6/a:2449,2445 spring green target p
    66465 
    66466 > color #25.6/a:2449,2446 spring green target p
    66467 
    66468 > color #25.6/a:2449,2501 spring green target p
    66469 
    66470 > volume #23.6 color black transparency 0.8
    66471 
    66472 > volume zone #23.6 nearAtoms #25.6/a:2449 & sidechain range 2
    66473 
    66474 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J245_c6.png height 600
    66475 > width 600 supersample 3
    66476 
    66477 > hide #!23.6 models
    66478 
    66479 > hide #!25.6 models
    66480 
    66481 > show #!23.7 models
    66482 
    66483 > volume #23.7 level 0.080000
    66484 
    66485 > show #!25.7 models
    66486 
    66487 > hide #25.7
    66488 
    66489 > color #25.7/a:2249-2252 sea green
    66490 
    66491 > color #25.7/a:2058-2066 cornflower blue
    66492 
    66493 > color #25.7/a:2445-2451 #FFDB66
    66494 
    66495 > color #25.7/a:2499-2506 lawn green
    66496 
    66497 > color #25.7/a:2449 hot pink target a
    66498 
    66499 > color #25.7/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    66500 > a
    66501 
    66502 > color #25.7/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    66503 
    66504 > ~show #25.7
    66505 
    66506 > ~hbonds #25.7
    66507 
    66508 > name to_show #25.7/a:2058-2065,2250-2252,2445-2451,2499-2506
    66509 
    66510 > show to_show
    66511 
    66512 > ~cartoon #25.7
    66513 
    66514 > cartoon to_show
    66515 
    66516 > transparency #25.7 60 target c
    66517 
    66518 > hbonds to_show & sidechain restrict both color white
    66519 
    66520 24 hydrogen bonds found 
    66521 
    66522 > color #25.7/a white target p
    66523 
    66524 > color #25.7/a:2449,2251 spring green target p
    66525 
    66526 > color #25.7/a:2449,2065 spring green target p
    66527 
    66528 > color #25.7/a:2449,2445 spring green target p
    66529 
    66530 > color #25.7/a:2449,2446 spring green target p
    66531 
    66532 > color #25.7/a:2449,2501 spring green target p
    66533 
    66534 > volume #23.7 color black transparency 0.8
    66535 
    66536 > volume zone #23.7 nearAtoms #25.7/a:2449 & sidechain range 2
    66537 
    66538 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J246_c7.png height 600
    66539 > width 600 supersample 3
    66540 
    66541 > hide #!23.7 models
    66542 
    66543 > hide #!25.7 models
    66544 
    66545 > show #!23.8 models
    66546 
    66547 > volume #23.8 level 0.080000
    66548 
    66549 > show #!25.8 models
    66550 
    66551 > hide #25.8
    66552 
    66553 > color #25.8/a:2249-2252 sea green
    66554 
    66555 > color #25.8/a:2058-2066 cornflower blue
    66556 
    66557 > color #25.8/a:2445-2451 #FFDB66
    66558 
    66559 > color #25.8/a:2499-2506 lawn green
    66560 
    66561 > color #25.8/a:2449 hot pink target a
    66562 
    66563 > color #25.8/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    66564 > a
    66565 
    66566 > color #25.8/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    66567 
    66568 > ~show #25.8
    66569 
    66570 > ~hbonds #25.8
    66571 
    66572 > name to_show #25.8/a:2058-2065,2250-2252,2445-2451,2499-2506
    66573 
    66574 > show to_show
    66575 
    66576 > ~cartoon #25.8
    66577 
    66578 > cartoon to_show
    66579 
    66580 > transparency #25.8 60 target c
    66581 
    66582 > hbonds to_show & sidechain restrict both color white
    66583 
    66584 24 hydrogen bonds found 
    66585 
    66586 > color #25.8/a white target p
    66587 
    66588 > color #25.8/a:2449,2251 spring green target p
    66589 
    66590 > color #25.8/a:2449,2065 spring green target p
    66591 
    66592 > color #25.8/a:2449,2445 spring green target p
    66593 
    66594 > color #25.8/a:2449,2446 spring green target p
    66595 
    66596 > color #25.8/a:2449,2501 spring green target p
    66597 
    66598 > volume #23.8 color black transparency 0.8
    66599 
    66600 > volume zone #23.8 nearAtoms #25.8/a:2449 & sidechain range 2
    66601 
    66602 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J247_c8.png height 600
    66603 > width 600 supersample 3
    66604 
    66605 > hide #!23.8 models
    66606 
    66607 > hide #!25.8 models
    66608 
    66609 > show #!23.9 models
    66610 
    66611 > volume #23.9 level 0.080000
    66612 
    66613 > show #!25.9 models
    66614 
    66615 > hide #25.9
    66616 
    66617 > color #25.9/a:2249-2252 sea green
    66618 
    66619 > color #25.9/a:2058-2066 cornflower blue
    66620 
    66621 > color #25.9/a:2445-2451 #FFDB66
    66622 
    66623 > color #25.9/a:2499-2506 lawn green
    66624 
    66625 > color #25.9/a:2449 hot pink target a
    66626 
    66627 > color #25.9/a:2449,2251,2065,2445,2446,2447,2501@N* & sidechain blue target
    66628 > a
    66629 
    66630 > color #25.9/a:2449,2251,2065,2445,2446,2447,2501@O* & sidechain red target a
    66631 
    66632 > ~show #25.9
    66633 
    66634 > ~hbonds #25.9
    66635 
    66636 > name to_show #25.9/a:2058-2065,2250-2252,2445-2451,2499-2506
    66637 
    66638 > show to_show
    66639 
    66640 > ~cartoon #25.9
    66641 
    66642 > cartoon to_show
    66643 
    66644 > transparency #25.9 60 target c
    66645 
    66646 > hbonds to_show & sidechain restrict both color white
    66647 
    66648 25 hydrogen bonds found 
    66649 
    66650 > color #25.9/a white target p
    66651 
    66652 > color #25.9/a:2449,2251 spring green target p
    66653 
    66654 > color #25.9/a:2449,2065 spring green target p
    66655 
    66656 > color #25.9/a:2449,2445 spring green target p
    66657 
    66658 > color #25.9/a:2449,2446 spring green target p
    66659 
    66660 > color #25.9/a:2449,2501 spring green target p
    66661 
    66662 > volume #23.9 color black transparency 0.8
    66663 
    66664 > volume zone #23.9 nearAtoms #25.9/a:2449 & sidechain range 2
    66665 
    66666 > save /Users/dalar193/Desktop/D2449_new/D2449_new_dE_J248_c9.png height 600
    66667 > width 600 supersample 3
    66668 
    66669 > hide #!23.9 models
    66670 
    66671 > hide #!25.9 models
    66672 
    66673 > show #!1.1 models
    66674 
    66675 > show #!1.2 models
    66676 
    66677 > save /Users/dalar193/wd/deltaRibosomes/figure_D2449_new.cxs
    66678 
    66679 ——— End of log from Sun Aug 17 22:37:00 2025 ———
    66680 
    66681 opened ChimeraX session 
    66682 
    66683 > hide #!1.1 models
    66684 
    66685 > windowsize 650 900
    66686 
    66687 > windowsize 60 900
    66688 
    66689 > windowsize 650 900
    66690 
    66691 > windowsize 650 850
    66692 
    66693 > windowsize 650 800
    66694 
    66695 > windowsize 650 950
    66696 
    66697 > windowsize 650 900
    66698 
    66699 [Repeated 1 time(s)]
    66700 
    66701 > windowsize 650 880
    66702 
    66703 > windowsize 650 900
    66704 
    66705 > windowsize 580 800
    66706 
    66707 > view matrix camera
    66708 > -0.61221,0.59688,0.51859,162.88,-0.42191,0.3081,-0.85268,141.46,-0.66872,-0.74083,0.063202,142.95
    66709 
    66710 > hide #1.2
    66711 
    66712 > ~cartoon #1.2
    66713 
    66714 > cartoon #1.2/a:2449-2463,2487-2501
    66715 
    66716 > show #1.2/a:2491,2457,2498,2451,2449-2463,2487-2501
    66717 
    66718 > color #1.2 dark slate gray
    66719 
    66720 > color #1.2/a:2491 & sidechain teal target a
    66721 
    66722 > color #1.2/a:2457,2498,2501,2449 & sidechain orange target a
    66723 
    66724 > color #1.2/a:2451 & sidechain green yellow target a
    66725 
    66726 > hbonds #1.2/a:2491 restrict #1.2& #1.2/a:2491 :< 4 color dark orange
    66727 
    66728 4 hydrogen bonds found 
    66729 
    66730 > show #1.2/a:2518 & sidechain
    66731 
    66732 > show #1.2/v:1-5
    66733 
    66734 > color #1.2/v medium aquamarine
    66735 
    66736 > hide #1.2/a:MG,HOH
    66737 
    66738 > show #1.2/a:6231,8885,6996,8460
    66739 
    66740 > color #1.2/a:MG tomato
    66741 
    66742 > color #1.2/a:HOH royal blue
    66743 
    66744 > pbond #1.2/a:2452@OP1 #1.2/a:6231 color dark orange
    66745 
    66746 > pbond #1.2/a:6231 #1.2/a:8885 color dark orange
    66747 
    66748 > pbond #1.2/a:8885 #1.2/a:2493@OP1 color dark orange
    66749 
    66750 > pbond #1.2/a:8885 #1.2/a:2494@OP2 color dark orange
    66751 
    66752 > pbond #1.2/a:2494@OP1 #1.2/v:3@N color dark orange
    66753 
    66754 > ~clip
    66755 
    66756 > clip near 34.284 far 62.067
    66757 
    66758 > clip list
    66759 
    66760 Using 2 clip planes: 
    66761 near offset -19.424, axis -0.519,0.853,-0.063, point 139.7,173.6,141.9) 
    66762 far offset 12.221, axis 0.519,-0.853,0.063, point 123.3,200.6,139.9) 
    66763 
    66764 > hide #!1.6 models
    66765 
    66766 > show #!1.6 models
    66767 
    66768 > hide #!1.6 models
    66769 
    66770 > show #!1.6 models
    66771 
    66772 > hide #!1.6 models
    66773 
    66774 > show #!1.1 models
    66775 
    66776 > hide #!1.1 models
    66777 
    66778 > show #!1.1 models
    66779 
    66780 > hide #!1.1 models
    66781 
    66782 > show #!1.1 models
    66783 
    66784 > hide #!1.1 models
    66785 
    66786 > show #!1.1 models
    66787 
    66788 > hide #!1.1 models
    66789 
    66790 > show #!1.1 models
    66791 
    66792 > select ~sel & ##selected
    66793 
    66794 Nothing selected 
    66795 
    66796 > volume zone #1.1 nearAtoms #1.2/a:2491
    66797 
    66798 > volume zone #1.1 nearAtoms #1.2/a:2491 range 2
    66799 
    66800 > volume zone #1.1 nearAtoms #1.2/a:2491 range 1.9
    66801 
    66802 > volume zone #1.1 nearAtoms #1.2/a:2491 & sidechain range 1
    66803 
    66804 > volume zone #1.1 nearAtoms #1.2/a:2491 & sideonly range 1
    66805 
    66806 > volume zone #1.1 nearAtoms #1.2/a:2491 & sideonly range 2
    66807 
    66808 > volume zone #1.1 nearAtoms #1.2/a:2491 & sidechain range 2
    66809 
    66810 > open /Users/dalar193/wd/deltaRibosomes/modelling/references/5mdz.cif id 1.16
    66811 
    66812 5mdz.cif title: 
    66813 Structure of the 70S ribosome (empty A site) [more info...] 
    66814  
    66815 Chain information for 5mdz.cif #8 
    66816 --- 
    66817 Chain | Description | UniProt 
    66818 1 | 23S ribosomal RNA |   
    66819 2 | 16S ribosomal RNA |   
    66820 3 | 5S ribosomal RNA |   
    66821 4 | mRNA |   
    66822 5 | fMet-NH-tRNA(fMet) |   
    66823 B | 50S ribosomal protein L2 | RL2_ECOLI 1-273 
    66824 C | 50S ribosomal protein L3 | RL3_ECOLI 1-209 
    66825 D | 50S ribosomal protein L4 | RL4_ECOLI 1-201 
    66826 E | 50S ribosomal protein L5 | RL5_ECOLI 1-179 
    66827 F | 50S ribosomal protein L6 | RL6_ECOLI 1-177 
    66828 G | 50S ribosomal protein L9 | RL9_ECOLI 1-149 
    66829 H | 50S ribosomal protein L10 | RL10_ECOLI 1-165 
    66830 I | 50S ribosomal protein L11 | RL11_ECOLI 0-141 
    66831 J | 50S ribosomal protein L13 | RL13_ECOLI 1-142 
    66832 K | 50S ribosomal protein L14 | RL14_ECOLI 1-123 
    66833 L | 50S ribosomal protein L15 | RL15_ECOLI 1-144 
    66834 M | 50S ribosomal protein L16 | RL16_ECOLI 1-136 
    66835 N | 50S ribosomal protein L17 | RL17_ECOLI 1-127 
    66836 O | 50S ribosomal protein L18 | RL18_ECOLI 1-117 
    66837 P | 50S ribosomal protein L19 | RL19_ECOLI 1-115 
    66838 Q | 50S ribosomal protein L20 | RL20_ECOLI 1-118 
    66839 R | 50S ribosomal protein L21 | RL21_ECOLI 1-103 
    66840 S | 50S ribosomal protein L22 | RL22_ECOLI 1-110 
    66841 T | 50S ribosomal protein L23 | RL23_ECOLI 1-100 
    66842 U | 50S ribosomal protein L24 | RL24_ECOLI 1-104 
    66843 V | 50S ribosomal protein L25 | RL25_ECOLI 1-94 
    66844 W | 50S ribosomal protein L27 | RL27_ECOLI 1-85 
    66845 X | 50S ribosomal protein L28 | RL28_ECOLI 1-78 
    66846 Y | 50S ribosomal protein L29 | RL29_ECOLI 1-63 
    66847 Z | 50S ribosomal protein L30 | RL30_ECOLI 1-59 
    66848 a | 50S ribosomal protein L31 | RL31_ECOLI 1-70 
    66849 b | 50S ribosomal protein L32 | RL32_ECOLI 1-57 
    66850 c | 50S ribosomal protein L33 | RL33_ECOLI 1-55 
    66851 d | 50S ribosomal protein L34 | RL34_ECOLI 1-46 
    66852 e | 50S ribosomal protein L35 | RL35_ECOLI 1-65 
    66853 f | 50S ribosomal protein L36 | RL36_ECOLI 1-38 
    66854 g | 30S ribosomal protein S2 | RS2_ECOLI 1-241 
    66855 h | 30S ribosomal protein S3 | RS3_ECOLI 1-233 
    66856 i | 30S ribosomal protein S4 | RS4_ECOLI 1-206 
    66857 j | 30S ribosomal protein S5 | RS5_ECOLI 1-167 
    66858 k | 30S ribosomal protein S6 | RS6_ECOLI 1-135 
    66859 l | 30S ribosomal protein S7 | RS7_ECOLI 1-179 
    66860 m | 30S ribosomal protein S8 | RS8_ECOLI 1-130 
    66861 n | 30S ribosomal protein S9 | RS9_ECOLI 1-130 
    66862 o | 30S ribosomal protein S10 | RS10_ECOLI 1-103 
    66863 p | 30S ribosomal protein S11 | RS11_ECOLI 1-129 
    66864 q | 30S ribosomal protein S12 | RS12_ECOLI 1-124 
    66865 r | 30S ribosomal protein S13 | RS13_ECOLI 1-118 
    66866 s | 30S ribosomal protein S14 | RS14_ECOLI 1-101 
    66867 t | 30S ribosomal protein S15 | RS15_ECOLI 1-89 
    66868 u | 30S ribosomal protein S16 | RS16_ECOLI 1-82 
    66869 v | 30S ribosomal protein S17 | RS17_ECOLI 1-84 
    66870 w | 30S ribosomal protein S18 | RS18_ECOLI 1-75 
    66871 x | 30S ribosomal protein S19 | RS19_ECOLI 1-92 
    66872 y | 30S ribosomal protein S20 | RS20_ECOLI 1-87 
    66873 z | 30S ribosomal protein S21 | RS21_ECOLI 1-71 
    66874  
    66875 Non-standard residues in 5mdz.cif #8 
    66876 --- 
    66877 FME — N-formylmethionine 
    66878 MG — magnesium ion 
    66879 ZN — zinc ion 
    66880  
    66881 
    66882 > open
    66883 > /Users/dalar193/wd/deltaRibosomes/modelling/references/5mdz_emd_3493.map id
    66884 > 1.15
    66885 
    66886 Opened 5mdz_emd_3493.map as #8, grid size 400,400,400, pixel 1.04, shown at
    66887 level 0.105, step 2, values float32 
    66888 
    66889 > style #1.16 stick
    66890 
    66891 Changed 146639 atom styles 
    66892 
    66893 > style #1.15 mesh
    66894 
    66895 Expected a keyword 
    66896 
    66897 > volume #1.15 style mesh
    66898 
    66899 > mmaker #1.16/1 to #1.2/a
    66900 
    66901 Using Nucleic matrix instead of BLOSUM-62 for matching 
    66902 Computing secondary structure 
    66903 Parameters 
    66904 --- 
    66905 Chain pairing | bb 
    66906 Alignment algorithm | Needleman-Wunsch 
    66907 Similarity matrix | Nucleic 
    66908 SS fraction | 0.3 
    66909 Gap open (HH/SS/other) | 18/18/6 
    66910 Gap extend | 1 
    66911 SS matrix |  |  | H | S | O 
    66912 ---|---|---|--- 
    66913 H | 6 | -9 | -6 
    66914 S |  | 6 | -6 
    66915 O |  |  | 4 
    66916 Iteration cutoff | 2 
    66917  
    66918 Matchmaker 8emm, chain a (#1.2) with 5mdz.cif, chain 1 (#1.16), sequence
    66919 alignment score = 10738.3 
    66920 RMSD between 2713 pruned atom pairs is 0.465 angstroms; (across all 2753
    66921 pairs: 0.598) 
    66922  
    66923 
    66924 > hide #1.16
    66925 
    66926 > ~cartoon #1.16
    66927 
    66928 > cartoon #1.16/1:2449-2463,2487-2501
    66929 
    66930 > show #1.16/1:2491,2457,2498,2451,2449-2463,2487-2501
    66931 
    66932 > color #1.16 purple
    66933 
    66934 > color #1.16/1:2491 & sidechain magenta target a
    66935 
    66936 > color #1.16/1:2457,2498,2501,2449 & sidechain orange target a
    66937 
    66938 > color #1.16/1:2451 & sidechain green yellow target a
    66939 
    66940 > hbonds #1.16/1:2491 restrict #1.16& #1.16/1:2491 :< 4 color dark orange
    66941 
    66942 3 hydrogen bonds found 
    66943 
    66944 > show #1.16/1:2518 & sidechain
    66945 
    66946 > hide #1.16/1:MG,HOH
    66947 
    66948 > show #1.16/1:3289
    66949 
    66950 > color #1.16/1:MG tomato
    66951 
    66952 > pbond #1.16/1:2452@OP1 #1.16/1:3289 color cyan
    66953 
    66954 > view matrix
    66955 
    66956 view matrix camera
    66957 -0.61221,0.59688,0.51859,162.88,-0.42191,0.3081,-0.85268,141.46,-0.66872,-0.74083,0.063202,142.95 
    66958 view matrix models
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,0,0,0,1,0,#12.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.2,1,0,0,0,0,1,0,0,0,0,1,0,#12.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.3,1,0,0,0,0,1,0,0,0,0,1,0,#12.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.4,1,0,0,0,0,1,0,0,0,0,1,0,#12.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.5,1,0,0,0,0,1,0,0,0,0,1,0,#12.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.6,1,0,0,0,0,1,0,0,0,0,1,0,#12.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.7,1,0,0,0,0,1,0,0,0,0,1,0,#12.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.8,1,0,0,0,0,1,0,0,0,0,1,0,#12.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#12.9,1,0,0,0,0,1,0,0,0,0,1,0,#12.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#13,1,0,0,0,0,1,0,0,0,0,1,0,#13.10,1,0,0,0,0,1,0,0,0,0,1,0,#13.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.2,1,0,0,0,0,1,0,0,0,0,1,0,#13.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.3,1,0,0,0,0,1,0,0,0,0,1,0,#13.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.4,1,0,0,0,0,1,0,0,0,0,1,0,#13.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.5,1,0,0,0,0,1,0,0,0,0,1,0,#13.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.6,1,0,0,0,0,1,0,0,0,0,1,0,#13.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.7,1,0,0,0,0,1,0,0,0,0,1,0,#13.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.8,1,0,0,0,0,1,0,0,0,0,1,0,#13.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#13.9,1,0,0,0,0,1,0,0,0,0,1,0,#13.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14,1,0,0,0,0,1,0,0,0,0,1,0,#14.10,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.10.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.2.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.3.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.4,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.4.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.5,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.5.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.6,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.6.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.7,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.7.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.8,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.8.3,1,0,0,0,0,1,0,0,0,0,1,0,#14.9,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#14.9.3,1,0,0,0,0,1,0,0,0,0,1,0,#20,1,0,0,0,0,1,0,0,0,0,1,0,#20.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.2,1,0,0,0,0,1,0,0,0,0,1,0,#20.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.3,1,0,0,0,0,1,0,0,0,0,1,0,#20.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#20.4,1,0,0,0,0,1,0,0,0,0,1,0,#20.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#21,1,0,0,0,0,1,0,0,0,0,1,0,#21.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.2,1,0,0,0,0,1,0,0,0,0,1,0,#21.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.3,1,0,0,0,0,1,0,0,0,0,1,0,#21.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#21.4,1,0,0,0,0,1,0,0,0,0,1,0,#21.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22,1,0,0,0,0,1,0,0,0,0,1,0,#22.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.2.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.3.3,1,0,0,0,0,1,0,0,0,0,1,0,#22.4,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#22.4.3,1,0,0,0,0,1,0,0,0,0,1,0,#23,1,0,0,0,0,1,0,0,0,0,1,0,#23.10,1,0,0,0,0,1,0,0,0,0,1,0,#23.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.2,1,0,0,0,0,1,0,0,0,0,1,0,#23.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.3,1,0,0,0,0,1,0,0,0,0,1,0,#23.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.4,1,0,0,0,0,1,0,0,0,0,1,0,#23.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.5,1,0,0,0,0,1,0,0,0,0,1,0,#23.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.6,1,0,0,0,0,1,0,0,0,0,1,0,#23.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.7,1,0,0,0,0,1,0,0,0,0,1,0,#23.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.8,1,0,0,0,0,1,0,0,0,0,1,0,#23.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#23.9,1,0,0,0,0,1,0,0,0,0,1,0,#23.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25,1,0,0,0,0,1,0,0,0,0,1,0,#25.10,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.10.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.1.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.2.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.3.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.4,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.4.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.5,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.5.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.6,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.6.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.7,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.7.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.8,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.8.3,1,0,0,0,0,1,0,0,0,0,1,0,#25.9,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.1,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.2,1,0,0,0,0,1,0,0,0,0,1,0,#25.9.3,1,0,0,0,0,1,0,0,0,0,1,0,#7,1,0,0,0,0,1,0,0,0,0,1,0 
    66960  
    66961 
    66962 > view position #1.15 sameAsModels #1.16
    66963 
    66964 > hide #!1.1 models
    66965 
    66966 > hide #!1.2 models
    66967 
    66968 > volume #1.15 step 1
    66969 
    66970 > cartoon suppressBackboneDisplay false
    66971 
    66972 > cartoon tether scale 0
    66973 
    66974 > hide #1.16
    66975 
    66976 > ~cartoon #1.16
    66977 
    66978 > cartoon #1.16/1:2449-2463,2487-2501
    66979 
    66980 > show #1.16/1:2491,2457,2498,2451,2449-2463,2487-2501
    66981 
    66982 > color #1.16 purple
    66983 
    66984 > color #1.16/1:2491 & sidechain magenta target a
    66985 
    66986 > color #1.16/1:2457,2498,2501,2449 & sidechain orange target a
    66987 
    66988 > color #1.16/1:2451 & sidechain green yellow target a
    66989 
    66990 > hbonds #1.16/1:2491 restrict #1.16& #1.16/1:2491 :< 4 color dark orange
    66991 
    66992 3 hydrogen bonds found 
    66993 
    66994 > show #1.16/1:2518 & sidechain
    66995 
    66996 > hide #1.16/1:MG,HOH
    66997 
    66998 > show #1.16/1:3289
    66999 
    67000 > color #1.16/1:MG tomato
    67001 
    67002 > pbond #1.16/1:2452@OP1 #1.16/1:3289 color cyan
    67003 
    67004 > volume #1.15 level 0.1
    67005 
    67006 > hide #!1.15 models
    67007 
    67008 > hide #!1.16 models
    67009 
    67010 > show #!1.2 models
    67011 
    67012 > show #!1.1 models
    67013 
    67014 > volume zone #1.1 nearAtoms (#1.2/a:2491 | #1.16/1:2491 ) & sidechain range 2
    67015 
    67016 > view matrix camera
    67017 > -0.61221,0.59688,0.51859,162.88,-0.42191,0.3081,-0.85268,141.46,-0.66872,-0.74083,0.063202,142.95
    67018 
    67019 > hide #1.2
    67020 
    67021 > ~cartoon #1.2
    67022 
    67023 > cartoon #1.2/a:2449-2463,2487-2501
    67024 
    67025 > show #1.2/a:2491,2457,2498,2451,2449-2463,2487-2501
    67026 
    67027 > color #1.2 dark slate gray
    67028 
    67029 > color #1.2/a:2491 & sidechain teal target a
    67030 
    67031 > color #1.2/a:2457,2498,2501,2449 & sidechain orange target a
    67032 
    67033 > color #1.2/a:2451 & sidechain green yellow target a
    67034 
    67035 > hbonds #1.2/a:2491 restrict #1.2& #1.2/a:2491 :< 4 color dark orange
    67036 
    67037 4 hydrogen bonds found 
    67038 
    67039 > show #1.2/a:2518 & sidechain
    67040 
    67041 > show #1.2/v:1-5
    67042 
    67043 > color #1.2/v medium aquamarine
    67044 
    67045 > hide #1.2/a:MG,HOH
    67046 
    67047 > show #1.2/a:6231,8885,6996,8460
    67048 
    67049 > color #1.2/a:MG tomato
    67050 
    67051 > color #1.2/a:HOH royal blue
    67052 
    67053 > view matrix camera
    67054 > -0.61221,0.59688,0.51859,162.88,-0.42191,0.3081,-0.85268,141.46,-0.66872,-0.74083,0.063202,142.95
    67055 
    67056 > view name H89
    67057 
    67058 > view H89
    67059 
    67060 > show #!1.16 models
    67061 
    67062 > hide #1.16
    67063 
    67064 > ~cartoon #1.16
    67065 
    67066 > show #1.16/1:2491 & sidechain
    67067 
    67068 > color #1.2 dark orange target p
    67069 
    67070 > hide #1.2/a:6996,8460
    67071 
    67072 > hide #!1.16 models
    67073 
    67074 > view H89
    67075 
    67076 > hide #!1.1 models
    67077 
    67078 > hide #1.16
    67079 
    67080 > ~cartoon #1.16
    67081 
    67082 > cartoon #1.16/1:2449-2463,2487-2501
    67083 
    67084 > show #1.16/1:2491,2457,2498,2451,2449-2463,2487-2501
    67085 
    67086 > color #1.16 purple
    67087 
    67088 > color #1.16/1:2491 & sidechain magenta target a
    67089 
    67090 > color #1.16/1:2457,2498,2501,2449 & sidechain orange target a
    67091 
    67092 > color #1.16/1:2451 & sidechain green yellow target a
    67093 
    67094 > hbonds #1.16/1:2491 restrict #1.16& #1.16/1:2491 :< 4 color dark orange
    67095 
    67096 3 hydrogen bonds found 
    67097 
    67098 > show #1.16/1:2518 & sidechain
    67099 
    67100 > hide #1.16/1:MG,HOH
    67101 
    67102 > show #1.16/1:3289
    67103 
    67104 > color #1.16/1:MG tomato
    67105 
    67106 > pbond #1.16/1:2452@OP1 #1.16/1:3289 color cyan
    67107 
    67108 > hide #!1.2 models
    67109 
    67110 > show #!1.16 models
    67111 
    67112 > show #!1.2 models
    67113 
    67114 > hide #!1.2 models
    67115 
    67116 > show #!1.2 models
    67117 
    67118 > hide #!1.16 models
    67119 
    67120 > show #!1.16 models
    67121 
    67122 > hide #!1.16 models
    67123 
    67124 > show #!1.16 models
    67125 
    67126 > hide #!1.16 models
    67127 
    67128 > show #!1.16 models
    67129 
    67130 > hide #!1.2 models
    67131 
    67132 > show #!1.2 models
    67133 
    67134 > hide #!1.2 models
    67135 
    67136 > show #!1.2 models
    67137 
    67138 > hide #!1.2 models
    67139 
    67140 > show #!1.2 models
    67141 
    67142 > hide #!1.2 models
    67143 
    67144 > show #!1.2 models
    67145 
    67146 > hide #!1.2 models
    67147 
    67148 > show #!1.2 models
    67149 
    67150 > hide #!1.2 models
    67151 
    67152 > show #!1.2 models
    67153 
    67154 > hide #!1.2 models
    67155 
    67156 > show #!1.2 models
    67157 
    67158 > hide #!1.2 models
    67159 
    67160 > show #!1.2 models
    67161 
    67162 > hide #!1.2 models
    67163 
    67164 > show #!1.2 models
    67165 
    67166 > hide #!1.2 models
    67167 
    67168 > show #!1.2 models
    67169 
    67170 > hide #!1.2 models
    67171 
    67172 > show #!1.2 models
    67173 
    67174 > hide #!1.2 models
    67175 
    67176 > transparency 0.5 #1.16 target c
    67177 
    67178 Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
    67179 'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword 
    67180 
    67181 > transparency #1.16 0.5 target c
    67182 
    67183 > transparency #1.16 0.5 target 0
    67184 
    67185 Invalid "target" argument: Character '0' is not an allowed target, must be one
    67186 of acrsbmpfl 
    67187 
    67188 > ~transparency #1.16
    67189 
    67190 Unknown command: ~transparency #1.16 
    67191 
    67192 > transparency #1.16 1
    67193 
    67194 > transparency #1.16 0
    67195 
    67196 > transparency #1.16 1
    67197 
    67198 > transparency #1.16 1 target c
    67199 
    67200 > transparency #1.16 0 target c
    67201 
    67202 > transparency #1.16 80 target c
    67203 
    67204 > show #!1.2 models
    67205 
    67206 > hide #!1.2 models
    67207 
    67208 > show #!1.2 models
    67209 
    67210 > hide #!1.2 models
    67211 
    67212 > show #!1.2 models
    67213 
    67214 > hide #!1.2 models
    67215 
    67216 > show #!1.2 models
    67217 
    67218 > hide #!1.2 models
    67219 
    67220 > show #!1.2 models
    67221 
    67222 > hide #!1.2 models
    67223 
    67224 > show #!1.2 models
    67225 
    67226 > hide #!1.2 models
    67227 
    67228 > show #!1.2 models
    67229 
    67230 > hide #!1.2 models
    67231 
    67232 > show #!1.2 models
    67233 
    67234 > hide #!1.2 models
    67235 
    67236 > hide #4.1
    67237 
    67238 > ~cartoon #4.1
    67239 
    67240 > cartoon #4.1/a:2449-2463,2487-2501
    67241 
    67242 > show #4.1/a:2491,2457,2498,2451,2449-2463,2487-2501
    67243 
    67244 > color #4.1 pale green
    67245 
    67246 > color #4.1/a:2491 & sidechain lime target a
    67247 
    67248 > color #4.1/a:2457,2498,2501,2449 & sidechain orange target a
    67249 
    67250 > color #4.1/a:2451 & sidechain green yellow target a
    67251 
    67252 > hbonds #4.1/a:2491 restrict #4.1& #4.1/a:2491 :< 4 color cyan
    67253 
    67254 Atom specifier selects no atoms 
    67255 
    67256 > show #4.1/a:2518 & sidechain
    67257 
    67258 > show #4.1/v:1-5
    67259 
    67260 > color #4.1/v medium spring green
    67261 
    67262 > hide #4.2
    67263 
    67264 > ~cartoon #4.2
    67265 
    67266 > cartoon #4.2/a:2449-2463,2487-2501
    67267 
    67268 > show #4.2/a:2491,2457,2498,2451,2449-2463,2487-2501
    67269 
    67270 > color #4.2 pale green
    67271 
    67272 > color #4.2/a:2491 & sidechain lime target a
    67273 
    67274 > color #4.2/a:2457,2498,2501,2449 & sidechain orange target a
    67275 
    67276 > color #4.2/a:2451 & sidechain green yellow target a
    67277 
    67278 > hbonds #4.2/a:2491 restrict #4.2& #4.2/a:2491 :< 4 color cyan
    67279 
    67280 Atom specifier selects no atoms 
    67281 
    67282 > show #4.2/a:2518 & sidechain
    67283 
    67284 > show #4.2/v:1-5
    67285 
    67286 > color #4.2/v medium spring green
    67287 
    67288 > hide #4.7
    67289 
    67290 > ~cartoon #4.7
    67291 
    67292 > cartoon #4.7/a:2449-2463,2487-2501
    67293 
    67294 > show #4.7/a:2491,2457,2498,2451,2449-2463,2487-2501
    67295 
    67296 > color #4.7 pale green
    67297 
    67298 > color #4.7/a:2491 & sidechain lime target a
    67299 
    67300 > color #4.7/a:2457,2498,2501,2449 & sidechain orange target a
    67301 
    67302 > color #4.7/a:2451 & sidechain green yellow target a
    67303 
    67304 > hbonds #4.7/a:2491 restrict #4.7& #4.7/a:2491 :< 4 color cyan
    67305 
    67306 Atom specifier selects no atoms 
    67307 
    67308 > show #4.7/a:2518 & sidechain
    67309 
    67310 > show #4.7/v:1-5
    67311 
    67312 > color #4.7/v medium spring green
    67313 
    67314 > hide #4.3
    67315 
    67316 > ~cartoon #4.3
    67317 
    67318 > cartoon #4.3/a:2449-2463,2487-2501
    67319 
    67320 > show #4.3/a:2491,2457,2498,2451,2449-2463,2487-2501
    67321 
    67322 > color #4.3 plum
    67323 
    67324 > color #4.3/a:2491 & sidechain medium violet red target a
    67325 
    67326 > color #4.3/a:2457,2498,2501,2449 & sidechain orange target a
    67327 
    67328 > color #4.3/a:2451 & sidechain green yellow target a
    67329 
    67330 > hbonds #4.3/a:2491 restrict #4.3 & #4.3/a:2491 :< 4 color cyan
    67331 
    67332 Atom specifier selects no atoms 
    67333 
    67334 > show #4.3/a:2518 & sidechain
    67335 
    67336 > show #4.3/v:1-5
    67337 
    67338 > color #4.3/v medium orchid
    67339 
    67340 > hide #!1.16 models
    67341 
    67342 > show #!6.1 models
    67343 
    67344 > hide #!6.1 models
    67345 
    67346 > show #!6.2 models
    67347 
    67348 > hide #!6.2 models
    67349 
    67350 > show #!6.4 models
    67351 
    67352 > hide #!6.4 models
    67353 
    67354 > show #!6.4 models
    67355 
    67356 > hide #!6.4 models
    67357 
    67358 > show #!6.1 models
    67359 
    67360 > hide #!6.1 models
    67361 
    67362 > show #!6.1 models
    67363 
    67364 > hide #6.1
    67365 
    67366 > ~cartoon #6.1
    67367 
    67368 > cartoon #6.1/a:2449-2463,2487-2501
    67369 
    67370 > show #6.1/a:2491,2457,2498,2451,2449-2463,2487-2501
    67371 
    67372 > color #6.1 pale green
    67373 
    67374 > color #6.1/a:2491 & sidechain lime target a
    67375 
    67376 > color #6.1/a:2457,2498,2501,2449 & sidechain orange target a
    67377 
    67378 > color #6.1/a:2451 & sidechain green yellow target a
    67379 
    67380 > hbonds #6.1/a:2491 restrict #6.1& #6.1/a:2491 :< 4 color cyan
    67381 
    67382 4 hydrogen bonds found 
    67383 
    67384 > show #6.1/a:2518 & sidechain
    67385 
    67386 > show #6.1/v:1-5
    67387 
    67388 > color #6.1/v medium spring green
    67389 
    67390 > hide #6.2
    67391 
    67392 > ~cartoon #6.2
    67393 
    67394 > cartoon #6.2/a:2449-2463,2487-2501
    67395 
    67396 > show #6.2/a:2491,2457,2498,2451,2449-2463,2487-2501
    67397 
    67398 > color #6.2 pale green
    67399 
    67400 > color #6.2/a:2491 & sidechain lime target a
    67401 
    67402 > color #6.2/a:2457,2498,2501,2449 & sidechain orange target a
    67403 
    67404 > color #6.2/a:2451 & sidechain green yellow target a
    67405 
    67406 > hbonds #6.2/a:2491 restrict #6.2& #6.2/a:2491 :< 4 color cyan
    67407 
    67408 4 hydrogen bonds found 
    67409 
    67410 > show #6.2/a:2518 & sidechain
    67411 
    67412 > show #6.2/v:1-5
    67413 
    67414 > color #6.2/v medium spring green
    67415 
    67416 > hide #6.7
    67417 
    67418 > ~cartoon #6.7
    67419 
    67420 > cartoon #6.7/a:2449-2463,2487-2501
    67421 
    67422 > show #6.7/a:2491,2457,2498,2451,2449-2463,2487-2501
    67423 
    67424 > color #6.7 pale green
    67425 
    67426 > color #6.7/a:2491 & sidechain lime target a
    67427 
    67428 > color #6.7/a:2457,2498,2501,2449 & sidechain orange target a
    67429 
    67430 > color #6.7/a:2451 & sidechain green yellow target a
    67431 
    67432 > hbonds #6.7/a:2491 restrict #6.7& #6.7/a:2491 :< 4 color cyan
    67433 
    67434 4 hydrogen bonds found 
    67435 
    67436 > show #6.7/a:2518 & sidechain
    67437 
    67438 > show #6.7/v:1-5
    67439 
    67440 > color #6.7/v medium spring green
    67441 
    67442 > hide #6.3
    67443 
    67444 > ~cartoon #6.3
    67445 
    67446 > cartoon #6.3/a:2449-2463,2487-2501
    67447 
    67448 > show #6.3/a:2491,2457,2498,2451,2449-2463,2487-2501
    67449 
    67450 > color #6.3 plum
    67451 
    67452 > color #6.3/a:2491 & sidechain medium violet red target a
    67453 
    67454 > color #6.3/a:2457,2498,2501,2449 & sidechain orange target a
    67455 
    67456 > color #6.3/a:2451 & sidechain green yellow target a
    67457 
    67458 > hbonds #6.3/a:2491 restrict #6.3 & #6.3/a:2491 :< 4 color cyan
    67459 
    67460 4 hydrogen bonds found 
    67461 
    67462 > show #6.3/a:2518 & sidechain
    67463 
    67464 > show #6.3/v:1-5
    67465 
    67466 > color #6.3/v medium orchid
    67467 
    67468 > hide #6.4
    67469 
    67470 > ~cartoon #6.4
    67471 
    67472 > cartoon #6.4/a:2449-2463,2487-2501
    67473 
    67474 > show #6.4/a:2491,2457,2498,2451,2449-2463,2487-2501
    67475 
    67476 > color #6.4 plum
    67477 
    67478 > color #6.4/a:2491 & sidechain medium violet red target a
    67479 
    67480 > color #6.4/a:2457,2498,2501,2449 & sidechain orange target a
    67481 
    67482 > color #6.4/a:2451 & sidechain green yellow target a
    67483 
    67484 > hbonds #6.4/a:2491 restrict #6.4 & #6.4/a:2491 :< 4 color cyan
    67485 
    67486 3 hydrogen bonds found 
    67487 
    67488 > show #6.4/a:2518 & sidechain
    67489 
    67490 > show #6.4/v:1-5
    67491 
    67492 > color #6.4/v medium orchid
    67493 
    67494 > hide #6.5
    67495 
    67496 > ~cartoon #6.5
    67497 
    67498 > cartoon #6.5/a:2449-2463,2487-2501
    67499 
    67500 > show #6.5/a:2491,2457,2498,2451,2449-2463,2487-2501
    67501 
    67502 > color #6.5 plum
    67503 
    67504 > color #6.5/a:2491 & sidechain medium violet red target a
    67505 
    67506 > color #6.5/a:2457,2498,2501,2449 & sidechain orange target a
    67507 
    67508 > color #6.5/a:2451 & sidechain green yellow target a
    67509 
    67510 > hbonds #6.5/a:2491 restrict #6.5 & #6.5/a:2491 :< 4 color cyan
    67511 
    67512 3 hydrogen bonds found 
    67513 
    67514 > show #6.5/a:2518 & sidechain
    67515 
    67516 > show #6.5/v:1-5
    67517 
    67518 > color #6.5/v medium orchid
    67519 
    67520 > hide #6.6
    67521 
    67522 > ~cartoon #6.6
    67523 
    67524 > cartoon #6.6/a:2449-2463,2487-2501
    67525 
    67526 > show #6.6/a:2491,2457,2498,2451,2449-2463,2487-2501
    67527 
    67528 > color #6.6 plum
    67529 
    67530 > color #6.6/a:2491 & sidechain medium violet red target a
    67531 
    67532 > color #6.6/a:2457,2498,2501,2449 & sidechain orange target a
    67533 
    67534 > color #6.6/a:2451 & sidechain green yellow target a
    67535 
    67536 > hbonds #6.6/a:2491 restrict #6.6 & #6.6/a:2491 :< 4 color cyan
    67537 
    67538 3 hydrogen bonds found 
    67539 
    67540 > show #6.6/a:2518 & sidechain
    67541 
    67542 > show #6.6/v:1-5
    67543 
    67544 > color #6.6/v medium orchid
    67545 
    67546 > hide #6.8
    67547 
    67548 > ~cartoon #6.8
    67549 
    67550 > cartoon #6.8/a:2449-2463,2487-2501
    67551 
    67552 > show #6.8/a:2491,2457,2498,2451,2449-2463,2487-2501
    67553 
    67554 > color #6.8 plum
    67555 
    67556 > color #6.8/a:2491 & sidechain medium violet red target a
    67557 
    67558 > color #6.8/a:2457,2498,2501,2449 & sidechain orange target a
    67559 
    67560 > color #6.8/a:2451 & sidechain green yellow target a
    67561 
    67562 > hbonds #6.8/a:2491 restrict #6.8 & #6.8/a:2491 :< 4 color cyan
    67563 
    67564 3 hydrogen bonds found 
    67565 
    67566 > show #6.8/a:2518 & sidechain
    67567 
    67568 > show #6.8/v:1-5
    67569 
    67570 > color #6.8/v medium orchid
    67571 
    67572 > hide #6.9
    67573 
    67574 > ~cartoon #6.9
    67575 
    67576 > cartoon #6.9/a:2449-2463,2487-2501
    67577 
    67578 > show #6.9/a:2491,2457,2498,2451,2449-2463,2487-2501
    67579 
    67580 > color #6.9 plum
    67581 
    67582 > color #6.9/a:2491 & sidechain medium violet red target a
    67583 
    67584 > color #6.9/a:2457,2498,2501,2449 & sidechain orange target a
    67585 
    67586 > color #6.9/a:2451 & sidechain green yellow target a
    67587 
    67588 > hbonds #6.9/a:2491 restrict #6.9 & #6.9/a:2491 :< 4 color cyan
    67589 
    67590 4 hydrogen bonds found 
    67591 
    67592 > show #6.9/a:2518 & sidechain
    67593 
    67594 > show #6.9/v:1-5
    67595 
    67596 > color #6.9/v medium orchid
    67597 
    67598 > hide #6.10
    67599 
    67600 > ~cartoon #6.10
    67601 
    67602 > cartoon #6.10/a:2449-2463,2487-2501
    67603 
    67604 > show #6.10/a:2491,2457,2498,2451,2449-2463,2487-2501
    67605 
    67606 > color #6.10 plum
    67607 
    67608 > color #6.10/a:2491 & sidechain medium violet red target a
    67609 
    67610 > color #6.10/a:2457,2498,2501,2449 & sidechain orange target a
    67611 
    67612 > color #6.10/a:2451 & sidechain green yellow target a
    67613 
    67614 > hbonds #6.10/a:2491 restrict #6.10 & #6.10/a:2491 :< 4 color cyan
    67615 
    67616 3 hydrogen bonds found 
    67617 
    67618 > show #6.10/a:2518 & sidechain
    67619 
    67620 > show #6.10/v:1-5
    67621 
    67622 > color #6.10/v medium orchid
    67623 
    67624 > show #!6.2 models
    67625 
    67626 > hide #!6.1 models
    67627 
    67628 > show #!6.1 models
    67629 
    67630 > show #!6.7 models
    67631 
    67632 > hide #!6.7 models
    67633 
    67634 > show #!6.7 models
    67635 
    67636 > hide #!6.2 models
    67637 
    67638 > hide #!6.7 models
    67639 
    67640 > hide #!6.1 models
    67641 
    67642 > show #!6.3 models
    67643 
    67644 > show #!6.4 models
    67645 
    67646 > show #!6.5 models
    67647 
    67648 > show #!6.6 models
    67649 
    67650 > show #!6.8 models
    67651 
    67652 > show #!6.9 models
    67653 
    67654 > show #!6.10 models
    67655 
    67656 > hide #!6.10 models
    67657 
    67658 > show #!6.10 models
    67659 
    67660 > hide #!6.10 models
    67661 
    67662 > hide #!6.9 models
    67663 
    67664 > hide #!6.8 models
    67665 
    67666 > hide #!6.6 models
    67667 
    67668 > hide #!6.5 models
    67669 
    67670 > hide #!6.4 models
    67671 
    67672 > hide #!6.3 models
    67673 
    67674 > show #!6.3 models
    67675 
    67676 > hide #!6.3 models
    67677 
    67678 > show #!1.2 models
    67679 
    67680 > show #!6.1 models
    67681 
    67682 > hide #!6.1 models
    67683 
    67684 > show #!6.2 models
    67685 
    67686 > hide #!6.2 models
    67687 
    67688 > show #!6.3 models
    67689 
    67690 > hide #!6.3 models
    67691 
    67692 > show #!6.4 models
    67693 
    67694 > hide #!6.4 models
    67695 
    67696 > show #!6.4 models
    67697 
    67698 > hide #!6.4 models
    67699 
    67700 > show #!6.5 models
    67701 
    67702 > hide #!6.5 models
    67703 
    67704 > show #!6.6 models
    67705 
    67706 > hide #!6.6 models
    67707 
    67708 > show #!6.6 models
    67709 
    67710 > hide #!6.6 models
    67711 
    67712 > show #!6.7 models
    67713 
    67714 > hide #!6.7 models
    67715 
    67716 > show #!6.8 models
    67717 
    67718 > hide #!6.8 models
    67719 
    67720 > show #!6.9 models
    67721 
    67722 > hide #!6.9 models
    67723 
    67724 > show #!6.9 models
    67725 
    67726 > hide #!6.9 models
    67727 
    67728 > show #!6.10 models
    67729 
    67730 > hide #!6.10 models
    67731 
    67732 > show #!6.10 models
    67733 
    67734 > hide #!6.10 models
    67735 
    67736 > show #!6.10 models
    67737 
    67738 > hide #!6.10 models
    67739 
    67740 > show #!6.10 models
    67741 
    67742 > hide #!6.10 models
    67743 
    67744 > show #!6.10 models
    67745 
    67746 > hide #!6.10 models
    67747 
    67748 > hide #!1.2 cartoons
    67749 
    67750 > cartoon #1.2/a:2449-2463,2487-2501
    67751 
    67752 > transparency #1.2 0 target c
    67753 
    67754 > transparency #1.16 0 target c
    67755 
    67756 > transparency #6.* 0 target c
    67757 
    67758 > transparency #25.* 0 target c
    67759 
    67760 > transparency #14.* 0 target c
    67761 
    67762 > show #!6.1 models
    67763 
    67764 > hide #!6.1 models
    67765 
    67766 > show #!6.2 models
    67767 
    67768 > hide #!6.2 models
    67769 
    67770 > show #!6.3 models
    67771 
    67772 > hide #!6.3 models
    67773 
    67774 > show #!6.4 models
    67775 
    67776 > hide #!6.4 models
    67777 
    67778 > show #!6.5 models
    67779 
    67780 > hide #!6.5 models
    67781 
    67782 > show #!6.6 models
    67783 
    67784 > hide #!6.6 models
    67785 
    67786 > show #!6.7 models
    67787 
    67788 > hide #!6.7 models
    67789 
    67790 > show #!6.8 models
    67791 
    67792 > hide #!6.8 models
    67793 
    67794 > show #!6.9 models
    67795 
    67796 > hide #!6.9 models
    67797 
    67798 > show #!6.10 models
    67799 
    67800 > hide #!6.10 models
    67801 
    67802 > hide #1.2
    67803 
    67804 > show #!6.1 models
    67805 
    67806 > hide #!6.1 models
    67807 
    67808 > show #!6.1 models
    67809 
    67810 > hide #!6.1 models
    67811 
    67812 > show #!6.1 models
    67813 
    67814 > hide #!6.1 models
    67815 
    67816 > show #!6.2 models
    67817 
    67818 > hide #!6.2 models
    67819 
    67820 > show #!6.3 models
    67821 
    67822 > hide #!6.3 models
    67823 
    67824 > show #!6.4 models
    67825 
    67826 > hide #!6.4 models
    67827 
    67828 > show #!6.4 models
    67829 
    67830 > hide #!6.4 models
    67831 
    67832 > show #!6.6 models
    67833 
    67834 > hide #!6.6 models
    67835 
    67836 > show #!6.7 models
    67837 
    67838 > hide #!6.7 models
    67839 
    67840 > show #!6.7 models
    67841 
    67842 > hide #!6.7 models
    67843 
    67844 > show #!6.8 models
    67845 
    67846 > hide #!6.8 models
    67847 
    67848 > show #!6.9 models
    67849 
    67850 > hide #!6.9 models
    67851 
    67852 > show #!6.9 models
    67853 
    67854 > hide #!6.9 models
    67855 
    67856 > show #!6.9 models
    67857 
    67858 > hide #!6.9 models
    67859 
    67860 > show #!6.10 models
    67861 
    67862 > hide #!6.10 models
    67863 
    67864 > show #!6.10 models
    67865 
    67866 > hide #!6.10 models
    67867 
    67868 > show #!1.16 models
    67869 
    67870 > hide #!1.16 models
    67871 
    67872 > show #!1.16 models
    67873 
    67874 > hide #!1.16 models
    67875 
    67876 > show #!1.16 models
    67877 
    67878 > hide #!1.16 models
    67879 
    67880 > show #!1.16 models
    67881 
    67882 > hide #!1.16 models
    67883 
    67884 > show #!1.16 models
    67885 
    67886 > hide #!1.16 models
    67887 
    67888 > show #!1.16 models
    67889 
    67890 > hide #!1.16 models
    67891 
    67892 > show #!1.16 models
    67893 
    67894 > hide #!1.16 models
    67895 
    67896 > show #!1.16 models
    67897 
    67898 > hide #!1.16 models
    67899 
    67900 > show #!1.16 models
    67901 
    67902 > hide #!1.16 models
    67903 
    67904 > transparency #1.2 80 target c
    67905 
    67906 > show #!6.1 models
    67907 
    67908 > hide #!6.1 models
    67909 
    67910 > show #!6.2 models
    67911 
    67912 > hide #!6.2 models
    67913 
    67914 > show #!6.3 models
    67915 
    67916 > hide #!6.3 models
    67917 
    67918 > show #!6.3 models
    67919 
    67920 > hide #!6.3 models
    67921 
    67922 > show #!6.4 models
    67923 
    67924 > hide #!6.4 models
    67925 
    67926 > show #!6.4 models
    67927 
    67928 > hide #!6.4 models
    67929 
    67930 > show #!6.5 models
    67931 
    67932 > hide #!6.5 models
    67933 
    67934 > show #!6.5 models
    67935 
    67936 > hide #!6.5 models
    67937 
    67938 > show #!6.6 models
    67939 
    67940 > hide #!6.6 models
    67941 
    67942 > show #!6.7 models
    67943 
    67944 > hide #!6.7 models
    67945 
    67946 > show #!6.7 models
    67947 
    67948 > hide #!6.7 models
    67949 
    67950 > show #!6.8 models
    67951 
    67952 > hide #!6.8 models
    67953 
    67954 > show #!6.8 models
    67955 
    67956 > show #!6.7 models
    67957 
    67958 > hide #!6.8 models
    67959 
    67960 > show #!6.8 models
    67961 
    67962 > hide #!6.7 models
    67963 
    67964 > show #!6.7 models
    67965 
    67966 > hide #!6.8 models
    67967 
    67968 > show #!6.8 models
    67969 
    67970 > hide #!6.8 models
    67971 
    67972 > show #!6.9 models
    67973 
    67974 > hide #!6.7 models
    67975 
    67976 > show #!6.8 models
    67977 
    67978 > hide #!6.9 models
    67979 
    67980 > show #!6.10 models
    67981 
    67982 > hide #!6.8 models
    67983 
    67984 > hide #!6.10 models
    67985 
    67986 > show #!6.7 models
    67987 
    67988 > hide #!6.7 models
    67989 
    67990 > show #!6.7 models
    67991 
    67992 > hide #!6.7 models
    67993 
    67994 > show #!6.2 models
    67995 
    67996 > hide #!6.2 models
    67997 
    67998 > show #!6.2 models
    67999 
    68000 > hide #!6.2 models
    68001 
    68002 > show #!6.1 models
    68003 
    68004 > hbonds #6.1/a:2491 restrict #6.1& #6.1/a:2491 :< 4 color cyan
    68005 
    68006 4 hydrogen bonds found 
    68007 
    68008 > hbonds #6.1/v:1-3 restrict #6.1& #6.1/a:2449-2501 :< 4 color cyan
    68009 
    68010 2 hydrogen bonds found 
    68011 
    68012 > pbond #6.1/a:2494@OP1 #6.1/v:3@N color dark orange
    68013 
    68014 > hbonds #6.1/v:1-3/a:2491 interModel false restrict #6.1 & #6.1/a:2491,2494
    68015 > :< 4 color dark orange
    68016 
    68017 6 hydrogen bonds found 
    68018 
    68019 > hide #1.2
    68020 
    68021 > ~cartoon #1.2
    68022 
    68023 > cartoon #1.2/a:2449-2463,2487-2501
    68024 
    68025 > show #1.2/a:2491,2457,2498,2451,2449-2463,2487-2501
    68026 
    68027 > color #1.2 dark slate gray
    68028 
    68029 > color #1.2/a:2491 & sidechain teal target a
    68030 
    68031 > color #1.2/a:2457,2498,2501,2449 & sidechain orange target a
    68032 
    68033 > color #1.2/a:2451 & sidechain green yellow target a
    68034 
    68035 > hbonds #1.2/a:2491/v:1-3 interModel false restrict #1.2& #1.2/a:2491,2494 :<
    68036 > 4 color dark orange
    68037 
    68038 5 hydrogen bonds found 
    68039 
    68040 > show #1.2/a:2518 & sidechain
    68041 
    68042 > show #1.2/v:1-5
    68043 
    68044 > color #1.2/v medium aquamarine
    68045 
    68046 > hide #1.2/a:MG,HOH
    68047 
    68048 > show #1.2/a:6231,8885
    68049 
    68050 > color #1.2/a:MG tomato
    68051 
    68052 > color #1.2/a:HOH royal blue
    68053 
    68054 > color #1.2 dark orange target p
    68055 
    68056 > pbond #1.2/a:2452@OP1 #1.2/a:6231 color dark orange
    68057 
    68058 > pbond #1.2/a:6231 #1.2/a:8885 color dark orange
    68059 
    68060 > pbond #1.2/a:8885 #1.2/a:2493@OP1 color dark orange
    68061 
    68062 > pbond #1.2/a:8885 #1.2/a:2494@OP2 color dark orange
    68063 
    68064 > windowsize 580 800
    68065 
    68066 > view matrix camera
    68067 > -0.61221,0.59688,0.51859,162.88,-0.42191,0.3081,-0.85268,141.46,-0.66872,-0.74083,0.063202,142.95
    68068 
    68069 > ~clip
    68070 
    68071 > clip near -19.424 far 12.221
    68072 
    68073 > hide #1.16
    68074 
    68075 > ~cartoon #1.16
    68076 
    68077 > cartoon #1.16/1:2449-2463,2487-2501
    68078 
    68079 > show #1.16/1:2491,2457,2498,2451,2449-2463,2487-2501
    68080 
    68081 > color #1.16 purple
    68082 
    68083 > color #1.16/1:2491 & sidechain magenta target a
    68084 
    68085 > color #1.16/1:2457,2498,2501,2449 & sidechain orange target a
    68086 
    68087 > color #1.16/1:2451 & sidechain green yellow target a
    68088 
    68089 > hbonds #1.16/1:2491/v:1-3 interModel false restrict #1.16& #1.16/1:2491,2494
    68090 > :< 4 color dark orange
    68091 
    68092 3 hydrogen bonds found 
    68093 
    68094 > show #1.16/1:2518 & sidechain
    68095 
    68096 > hide #1.16/1:MG,HOH
    68097 
    68098 > show #1.16/1:3289
    68099 
    68100 > color #1.16/1:MG tomato
    68101 
    68102 > pbond #1.16/1:2452@OP1 #1.16/1:3289 color cyan
    68103 
    68104 > hide #6.1
    68105 
    68106 > ~cartoon #6.1
    68107 
    68108 > cartoon #6.1/a:2449-2463,2487-2501
    68109 
    68110 > show #6.1/a:2491,2457,2498,2451,2449-2463,2487-2501
    68111 
    68112 > color #6.1 pale green
    68113 
    68114 > color #6.1/a:2491 & sidechain lime target a
    68115 
    68116 > color #6.1/a:2457,2498,2501,2449 & sidechain orange target a
    68117 
    68118 > color #6.1/a:2451 & sidechain green yellow target a
    68119 
    68120 > hbonds #6.1/a:2491/v:1-3 interModel false restrict #6.1& #6.1/a:2491,2494 :<
    68121 > 4 color dark orange
    68122 
    68123 6 hydrogen bonds found 
    68124 
    68125 > show #6.1/a:2518 & sidechain
    68126 
    68127 > show #6.1/v:1-5
    68128 
    68129 > color #6.1/v medium spring green
    68130 
    68131 > pbond #6.1/a:2494@OP1 #6.1/v:3@N color dark orange
    68132 
    68133 > hide #!1.2 models
    68134 
    68135 > show #!1.2 models
    68136 
    68137 > hide #!1.2 models
    68138 
    68139 > show #!1.2 models
    68140 
    68141 > hide #!1.2 models
    68142 
    68143 > show #!1.2 models
    68144 
    68145 > hide #!1.2 models
    68146 
    68147 > hide #!6.1 models
    68148 
    68149 > show #!6.2 models
    68150 
    68151 > hide #!6.2 models
    68152 
    68153 > show #!6.7 models
    68154 
    68155 > hide #!6.7 models
    68156 
    68157 > show #!6.10 models
    68158 
    68159 > hide #!6.10 models
    68160 
    68161 > show #!6.9 models
    68162 
    68163 > hide #!6.9 models
    68164 
    68165 > show #!6.9 models
    68166 
    68167 > hide #!6.9 models
    68168 
    68169 > show #!6.2 models
    68170 
    68171 > hbonds #6.2/a:2491/v:1-3 interModel false restrict #6.2& #6.2/a:2491,2494 :<
    68172 > 4 color dark orange
    68173 
    68174 5 hydrogen bonds found 
    68175 
    68176 > show #!6.3 models
    68177 
    68178 > hide #!6.2 models
    68179 
    68180 > show #!6.4 models
    68181 
    68182 > hide #!6.3 models
    68183 
    68184 > show #!6.5 models
    68185 
    68186 > hide #!6.4 models
    68187 
    68188 > show #!6.6 models
    68189 
    68190 > hide #!6.5 models
    68191 
    68192 > show #!6.7 models
    68193 
    68194 > hide #!6.6 models
    68195 
    68196 > hbonds #6.7/a:2491/v:1-3 interModel false restrict #6.7& #6.7/a:2491,2494 :<
    68197 > 4 color dark orange
    68198 
    68199 6 hydrogen bonds found 
    68200 
    68201 > show #!6.8 models
    68202 
    68203 > hide #!6.7 models
    68204 
    68205 > show #!6.9 models
    68206 
    68207 > hide #!6.8 models
    68208 
    68209 > hbonds #6.9/a:2491/v:1-3 interModel false restrict #6.9 & #6.9/a:2491,2494
    68210 > :< 4 color cyan
    68211 
    68212 4 hydrogen bonds found 
    68213 
    68214 > show #!6.10 models
    68215 
    68216 > hide #!6.9 models
    68217 
    68218 > hide #!6.10 models
    68219 
    68220 > show #!6.10 models
    68221 
    68222 > hide #!6.10 models
    68223 
    68224 > show #!6.10 models
    68225 
    68226 > hide #!6.10 models
    68227 
    68228 > show #!6.10 models
    68229 
    68230 > show #!6.9 models
    68231 
    68232 > hide #!6.10 models
    68233 
    68234 > show #!6.7 models
    68235 
    68236 > hide #!6.9 models
    68237 
    68238 > show #!6.6 models
    68239 
    68240 > hide #!6.6 models
    68241 
    68242 > view H89
    68243 
    68244 > hide #!1.2 models
    68245 
    68246 > hide #!1.16 models
    68247 
    68248 > hide #!6.10 models
    68249 
    68250 > hide #!6.1 models
    68251 
    68252 > hide #!6.2 models
    68253 
    68254 > hide #!6.3 models
    68255 
    68256 > hide #!6.4 models
    68257 
    68258 > hide #!6.5 models
    68259 
    68260 > hide #!6.6 models
    68261 
    68262 > hide #!6.7 models
    68263 
    68264 > hide #!6.8 models
    68265 
    68266 > hide #!6.9 models
    68267 
    68268 > show #!1.2 models
    68269 
    68270 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM.png height 580 width 800
    68271 > supersample 4
    68272 
    68273 > hide #!1.2 models
    68274 
    68275 > show #!1.16 models
    68276 
    68277 > save /Users/dalar193/Desktop/H89_U2491/H89-5MDZ.png height 580 width 800
    68278 > supersample 4
    68279 
    68280 > hide #!1.16 models
    68281 
    68282 > hide #!1.2 models
    68283 
    68284 > hide #!1.16 models
    68285 
    68286 > hide #!6.10 models
    68287 
    68288 > hide #!6.1 models
    68289 
    68290 > hide #!6.2 models
    68291 
    68292 > hide #!6.3 models
    68293 
    68294 > hide #!6.4 models
    68295 
    68296 > hide #!6.5 models
    68297 
    68298 > hide #!6.6 models
    68299 
    68300 > hide #!6.7 models
    68301 
    68302 > hide #!6.8 models
    68303 
    68304 > hide #!6.9 models
    68305 
    68306 > show #!1.2 models
    68307 
    68308 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM.png width 580 height 800
    68309 > supersample 4
    68310 
    68311 > hide #!1.2 models
    68312 
    68313 > show #!1.16 models
    68314 
    68315 > save /Users/dalar193/Desktop/H89_U2491/H89-5MDZ.png width 580 height 800
    68316 > supersample 4
    68317 
    68318 > hide #!1.16 models
    68319 
    68320 > show #!6.10 models
    68321 
    68322 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class0.png width 580 height
    68323 > 800 supersample 4
    68324 
    68325 > hide #!6.10 models
    68326 
    68327 > show #!6.1 models
    68328 
    68329 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class1.png width 580 height
    68330 > 800 supersample 4
    68331 
    68332 > hide #!6.1 models
    68333 
    68334 > transparency #1.2 0 target c
    68335 
    68336 > hide #!1.2 models
    68337 
    68338 > hide #!1.16 models
    68339 
    68340 > hide #!6.10 models
    68341 
    68342 > hide #!6.1 models
    68343 
    68344 > hide #!6.2 models
    68345 
    68346 > hide #!6.3 models
    68347 
    68348 > hide #!6.4 models
    68349 
    68350 > hide #!6.5 models
    68351 
    68352 > hide #!6.6 models
    68353 
    68354 > hide #!6.7 models
    68355 
    68356 > hide #!6.8 models
    68357 
    68358 > hide #!6.9 models
    68359 
    68360 > show #!1.2 models
    68361 
    68362 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM.png width 580 height 800
    68363 > supersample 4
    68364 
    68365 > hide #!1.2 models
    68366 
    68367 > show #!1.16 models
    68368 
    68369 > save /Users/dalar193/Desktop/H89_U2491/H89-5MDZ.png width 580 height 800
    68370 > supersample 4
    68371 
    68372 > hide #!1.16 models
    68373 
    68374 > show #!6.10 models
    68375 
    68376 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class0.png width 580 height
    68377 > 800 supersample 4
    68378 
    68379 > hide #!6.10 models
    68380 
    68381 > show #!6.1 models
    68382 
    68383 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class1.png width 580 height
    68384 > 800 supersample 4
    68385 
    68386 > hide #!6.1 models
    68387 
    68388 > show #!6.2 models
    68389 
    68390 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class2.png width 580 height
    68391 > 800 supersample 4
    68392 
    68393 > hide #!6.2 models
    68394 
    68395 > show #!6.3 models
    68396 
    68397 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class3.png width 580 height
    68398 > 800 supersample 4
    68399 
    68400 > hide #!6.3 models
    68401 
    68402 > show #!6.4 models
    68403 
    68404 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class4.png width 580 height
    68405 > 800 supersample 4
    68406 
    68407 > hide #!6.4 models
    68408 
    68409 > show #!6.5 models
    68410 
    68411 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class5.png width 580 height
    68412 > 800 supersample 4
    68413 
    68414 > hide #!6.5 models
    68415 
    68416 > show #!6.6 models
    68417 
    68418 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class6.png width 580 height
    68419 > 800 supersample 4
    68420 
    68421 > hide #!6.6 models
    68422 
    68423 > show #!6.7 models
    68424 
    68425 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class7.png width 580 height
    68426 > 800 supersample 4
    68427 
    68428 > hide #!6.7 models
    68429 
    68430 > show #!6.8 models
    68431 
    68432 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class8.png width 580 height
    68433 > 800 supersample 4
    68434 
    68435 > hide #!6.8 models
    68436 
    68437 > show #!6.9 models
    68438 
    68439 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class9.png width 580 height
    68440 > 800 supersample 4
    68441 
    68442 > hide #!6.9 models
    68443 
    68444 > show #!1.2 models
    68445 
    68446 > hide #1.2
    68447 
    68448 > show #!1.2 models
    68449 
    68450 > hide #1.2
    68451 
    68452 > transparency #1.2 80 target c
    68453 
    68454 > show #!1.16 models
    68455 
    68456 > save /Users/dalar193/Desktop/H89_U2491/H89-5MDZ_cmp8EMM.png width 580 height
    68457 > 800 supersample 4
    68458 
    68459 > hide #!1.16 models
    68460 
    68461 > show #!6.10 models
    68462 
    68463 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class0_cmp8EMM.png width 580
    68464 > height 800 supersample 4
    68465 
    68466 > hide #!6.10 models
    68467 
    68468 > show #!6.1 models
    68469 
    68470 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class1_cmp8EMM.png width 580
    68471 > height 800 supersample 4
    68472 
    68473 > hide #!6.1 models
    68474 
    68475 > show #!6.2 models
    68476 
    68477 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class2_cmp8EMM.png width 580
    68478 > height 800 supersample 4
    68479 
    68480 > hide #!6.2 models
    68481 
    68482 > show #!6.3 models
    68483 
    68484 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class3_cmp8EMM.png width 580
    68485 > height 800 supersample 4
    68486 
    68487 > hide #!6.3 models
    68488 
    68489 > show #!6.4 models
    68490 
    68491 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class4_cmp8EMM.png width 580
    68492 > height 800 supersample 4
    68493 
    68494 > hide #!6.4 models
    68495 
    68496 > show #!6.5 models
    68497 
    68498 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class5_cmp8EMM.png width 580
    68499 > height 800 supersample 4
    68500 
    68501 > hide #!6.5 models
    68502 
    68503 > show #!6.6 models
    68504 
    68505 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class6_cmp8EMM.png width 580
    68506 > height 800 supersample 4
    68507 
    68508 > hide #!6.6 models
    68509 
    68510 > show #!6.7 models
    68511 
    68512 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class7_cmp8EMM.png width 580
    68513 > height 800 supersample 4
    68514 
    68515 > hide #!6.7 models
    68516 
    68517 > show #!6.8 models
    68518 
    68519 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class8_cmp8EMM.png width 580
    68520 > height 800 supersample 4
    68521 
    68522 > hide #!6.8 models
    68523 
    68524 > show #!6.9 models
    68525 
    68526 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class9_cmp8EMM.png width 580
    68527 > height 800 supersample 4
    68528 
    68529 > hide #!6.9 models
    68530 
    68531 > transparency #1.2 0 target c
    68532 
    68533 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-cartoon.png width 580 height
    68534 > 800 supersample 4
    68535 
    68536 > show #!1.16 models
    68537 
    68538 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-5MDZ.png width 580 height
    68539 > 800 supersample 4
    68540 
    68541 > hide #!1.16 models
    68542 
    68543 > show #!6.10 models
    68544 
    68545 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-del9-class0.png width 580
    68546 > height 800 supersample 4
    68547 
    68548 > hide #!6.10 models
    68549 
    68550 > show #!6.1 models
    68551 
    68552 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-del9-class1.png width 580
    68553 > height 800 supersample 4
    68554 
    68555 > hide #!6.1 models
    68556 
    68557 > show #!6.2 models
    68558 
    68559 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-del9-class2.png width 580
    68560 > height 800 supersample 4
    68561 
    68562 > hide #!6.2 models
    68563 
    68564 > show #!6.3 models
    68565 
    68566 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-del9-class3.png width 580
    68567 > height 800 supersample 4
    68568 
    68569 > hide #!6.3 models
    68570 
    68571 > show #!6.4 models
    68572 
    68573 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-del9-class4.png width 580
    68574 > height 800 supersample 4
    68575 
    68576 > hide #!6.4 models
    68577 
    68578 > show #!6.5 models
    68579 
    68580 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-del9-class5.png width 580
    68581 > height 800 supersample 4
    68582 
    68583 > hide #!6.5 models
    68584 
    68585 > show #!6.6 models
    68586 
    68587 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-del9-class6.png width 580
    68588 > height 800 supersample 4
    68589 
    68590 > hide #!6.6 models
    68591 
    68592 > show #!6.7 models
    68593 
    68594 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-del9-class7.png width 580
    68595 > height 800 supersample 4
    68596 
    68597 > hide #!6.7 models
    68598 
    68599 > show #!6.8 models
    68600 
    68601 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-del9-class8.png width 580
    68602 > height 800 supersample 4
    68603 
    68604 > hide #!6.8 models
    68605 
    68606 > show #!6.9 models
    68607 
    68608 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-del9-class9.png width 580
    68609 > height 800 supersample 4
    68610 
    68611 > hide #!6.9 models
    68612 
    68613 > transparency #1.2 80 target c
    68614 
    68615 > show #!1.16 models
    68616 
    68617 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi--5MDZ.png width 580
    68618 > height 800 supersample 4
    68619 
    68620 > hide #!1.16 models
    68621 
    68622 > show #!6.10 models
    68623 
    68624 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi--del9-class0.png width
    68625 > 580 height 800 supersample 4
    68626 
    68627 > hide #!6.10 models
    68628 
    68629 > show #!6.1 models
    68630 
    68631 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi--del9-class1.png width
    68632 > 580 height 800 supersample 4
    68633 
    68634 > hide #!6.1 models
    68635 
    68636 > show #!6.2 models
    68637 
    68638 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi--del9-class2.png width
    68639 > 580 height 800 supersample 4
    68640 
    68641 > hide #!6.2 models
    68642 
    68643 > show #!6.3 models
    68644 
    68645 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi--del9-class3.png width
    68646 > 580 height 800 supersample 4
    68647 
    68648 > hide #!6.3 models
    68649 
    68650 > show #!6.4 models
    68651 
    68652 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi--del9-class4.png width
    68653 > 580 height 800 supersample 4
    68654 
    68655 > hide #!6.4 models
    68656 
    68657 > show #!6.5 models
    68658 
    68659 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi--del9-class5.png width
    68660 > 580 height 800 supersample 4
    68661 
    68662 > hide #!6.5 models
    68663 
    68664 > show #!6.6 models
    68665 
    68666 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi--del9-class6.png width
    68667 > 580 height 800 supersample 4
    68668 
    68669 > hide #!6.6 models
    68670 
    68671 > show #!6.7 models
    68672 
    68673 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi--del9-class7.png width
    68674 > 580 height 800 supersample 4
    68675 
    68676 > hide #!6.7 models
    68677 
    68678 > show #!6.8 models
    68679 
    68680 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi--del9-class8.png width
    68681 > 580 height 800 supersample 4
    68682 
    68683 > hide #!6.8 models
    68684 
    68685 > show #!6.9 models
    68686 
    68687 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi--del9-class9.png width
    68688 > 580 height 800 supersample 4
    68689 
    68690 > hide #!6.9 models
    68691 
    68692 > transparency #1.2 80 target c
    68693 
    68694 > show #!1.16 models
    68695 
    68696 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi-5MDZ.png width 580
    68697 > height 800 supersample 4
    68698 
    68699 > hide #!1.16 models
    68700 
    68701 > show #!6.10 models
    68702 
    68703 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi-del9-class0.png width
    68704 > 580 height 800 supersample 4
    68705 
    68706 > hide #!6.10 models
    68707 
    68708 > show #!6.1 models
    68709 
    68710 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi-del9-class1.png width
    68711 > 580 height 800 supersample 4
    68712 
    68713 > hide #!6.1 models
    68714 
    68715 > show #!6.2 models
    68716 
    68717 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi-del9-class2.png width
    68718 > 580 height 800 supersample 4
    68719 
    68720 > hide #!6.2 models
    68721 
    68722 > show #!6.3 models
    68723 
    68724 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi-del9-class3.png width
    68725 > 580 height 800 supersample 4
    68726 
    68727 > hide #!6.3 models
    68728 
    68729 > show #!6.4 models
    68730 
    68731 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi-del9-class4.png width
    68732 > 580 height 800 supersample 4
    68733 
    68734 > hide #!6.4 models
    68735 
    68736 > show #!6.5 models
    68737 
    68738 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi-del9-class5.png width
    68739 > 580 height 800 supersample 4
    68740 
    68741 > hide #!6.5 models
    68742 
    68743 > show #!6.6 models
    68744 
    68745 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi-del9-class6.png width
    68746 > 580 height 800 supersample 4
    68747 
    68748 > hide #!6.6 models
    68749 
    68750 > show #!6.7 models
    68751 
    68752 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi-del9-class7.png width
    68753 > 580 height 800 supersample 4
    68754 
    68755 > hide #!6.7 models
    68756 
    68757 > show #!6.8 models
    68758 
    68759 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi-del9-class8.png width
    68760 > 580 height 800 supersample 4
    68761 
    68762 > hide #!6.8 models
    68763 
    68764 > show #!6.9 models
    68765 
    68766 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM-semi-del9-class9.png width
    68767 > 580 height 800 supersample 4
    68768 
    68769 > hide #!6.9 models
    68770 
    68771 > hide #14.3
    68772 
    68773 > ~cartoon #14.3
    68774 
    68775 > cartoon #14.3/a:2449-2463,2487-2501
    68776 
    68777 > show #14.3/a:2491,2457,2498,2451,2449-2463,2487-2501
    68778 
    68779 > color #14.3 pale green
    68780 
    68781 > color #14.3/a:2491 & sidechain lime target a
    68782 
    68783 > color #14.3/a:2457,2498,2501,2449 & sidechain orange target a
    68784 
    68785 > color #14.3/a:2451 & sidechain green yellow target a
    68786 
    68787 > hbonds #14.3/a:2491/v:1-3 interModel false restrict #14.3& #14.3/a:2491,2494
    68788 > :< 4 color dark orange
    68789 
    68790 3 hydrogen bonds found 
    68791 
    68792 > show #14.3/a:2518 & sidechain
    68793 
    68794 > show #14.3/v:1-5
    68795 
    68796 > color #14.3/v medium spring green
    68797 
    68798 > transparency #1.2 0 target c
    68799 
    68800 > hide #!1.2 models
    68801 
    68802 > show #!14.4 models
    68803 
    68804 > hide #!14.4 models
    68805 
    68806 > show #!14.3 models
    68807 
    68808 > hide #!14.3 models
    68809 
    68810 > show #!14.3 models
    68811 
    68812 > hbonds #14.3/a:2491/v:1-3 interModel false restrict #14.3& #14.3/a:2491,2494
    68813 > :< 4 color dark orange
    68814 
    68815 3 hydrogen bonds found 
    68816 
    68817 > show #!6.8 models
    68818 
    68819 > hide #!6.8 models
    68820 
    68821 > show #!6.7 models
    68822 
    68823 > hide #!6.7 models
    68824 
    68825 > show #!6.7 models
    68826 
    68827 > hide #!6.7 models
    68828 
    68829 > show #!6.7 models
    68830 
    68831 > hide #!6.7 models
    68832 
    68833 > show #!6.7 models
    68834 
    68835 > hide #!6.7 models
    68836 
    68837 > show #!6.7 models
    68838 
    68839 > hide #!6.7 models
    68840 
    68841 > show #!6.7 models
    68842 
    68843 > hide #!6.7 models
    68844 
    68845 > show #!6.7 models
    68846 
    68847 > hide #!6.7 models
    68848 
    68849 > show #!6.7 models
    68850 
    68851 > hide #!6.7 models
    68852 
    68853 > show #!6.7 models
    68854 
    68855 > hide #!6.7 models
    68856 
    68857 > hide #14.9
    68858 
    68859 > ~cartoon #14.9
    68860 
    68861 > cartoon #14.9/a:2449-2463,2487-2501
    68862 
    68863 > show #14.9/a:2491,2457,2498,2451,2449-2463,2487-2501
    68864 
    68865 > color #14.9 pale green
    68866 
    68867 > color #14.9/a:2491 & sidechain lime target a
    68868 
    68869 > color #14.9/a:2457,2498,2501,2449 & sidechain orange target a
    68870 
    68871 > color #14.9/a:2451 & sidechain green yellow target a
    68872 
    68873 > hbonds #14.9/a:2491/v:1-3 interModel false restrict #14.9& #14.9/a:2491,2494
    68874 > :< 4 color dark orange
    68875 
    68876 4 hydrogen bonds found 
    68877 
    68878 > show #14.9/a:2518 & sidechain
    68879 
    68880 > show #14.9/v:1-5
    68881 
    68882 > color #14.9/v medium spring green
    68883 
    68884 > hide #14.1
    68885 
    68886 > ~cartoon #14.1
    68887 
    68888 > cartoon #14.1/a:2449-2463,2487-2501
    68889 
    68890 > show #14.1/a:2491,2457,2498,2451,2449-2463,2487-2501
    68891 
    68892 > color #14.1 plum
    68893 
    68894 > color #14.1/a:2491 & sidechain medium violet red target a
    68895 
    68896 > color #14.1/a:2457,2498,2501,2449 & sidechain orange target a
    68897 
    68898 > color #14.1/a:2451 & sidechain green yellow target a
    68899 
    68900 > hbonds #14.1/a:2491/v:1-3 interModel false restrict #14.1 &
    68901 > #14.1/a:2491,2494 :< 4 color cyan
    68902 
    68903 2 hydrogen bonds found 
    68904 
    68905 > show #14.1/a:2518 & sidechain
    68906 
    68907 > show #14.1/v:1-5
    68908 
    68909 > color #14.1/v medium orchid
    68910 
    68911 > hide #14.2
    68912 
    68913 > ~cartoon #14.2
    68914 
    68915 > cartoon #14.2/a:2449-2463,2487-2501
    68916 
    68917 > show #14.2/a:2491,2457,2498,2451,2449-2463,2487-2501
    68918 
    68919 > color #14.2 plum
    68920 
    68921 > color #14.2/a:2491 & sidechain medium violet red target a
    68922 
    68923 > color #14.2/a:2457,2498,2501,2449 & sidechain orange target a
    68924 
    68925 > color #14.2/a:2451 & sidechain green yellow target a
    68926 
    68927 > hbonds #14.2/a:2491/v:1-3 interModel false restrict #14.2 &
    68928 > #14.2/a:2491,2494 :< 4 color cyan
    68929 
    68930 2 hydrogen bonds found 
    68931 
    68932 > show #14.2/a:2518 & sidechain
    68933 
    68934 > show #14.2/v:1-5
    68935 
    68936 > color #14.2/v medium orchid
    68937 
    68938 > hide #14.4
    68939 
    68940 > ~cartoon #14.4
    68941 
    68942 > cartoon #14.4/a:2449-2463,2487-2501
    68943 
    68944 > show #14.4/a:2491,2457,2498,2451,2449-2463,2487-2501
    68945 
    68946 > color #14.4 plum
    68947 
    68948 > color #14.4/a:2491 & sidechain medium violet red target a
    68949 
    68950 > color #14.4/a:2457,2498,2501,2449 & sidechain orange target a
    68951 
    68952 > color #14.4/a:2451 & sidechain green yellow target a
    68953 
    68954 > hbonds #14.4/a:2491/v:1-3 interModel false restrict #14.4 &
    68955 > #14.4/a:2491,2494 :< 4 color cyan
    68956 
    68957 3 hydrogen bonds found 
    68958 
    68959 > show #14.4/a:2518 & sidechain
    68960 
    68961 > show #14.4/v:1-5
    68962 
    68963 > color #14.4/v medium orchid
    68964 
    68965 > hide #14.5
    68966 
    68967 > ~cartoon #14.5
    68968 
    68969 > cartoon #14.5/a:2449-2463,2487-2501
    68970 
    68971 > show #14.5/a:2491,2457,2498,2451,2449-2463,2487-2501
    68972 
    68973 > color #14.5 plum
    68974 
    68975 > color #14.5/a:2491 & sidechain medium violet red target a
    68976 
    68977 > color #14.5/a:2457,2498,2501,2449 & sidechain orange target a
    68978 
    68979 > color #14.5/a:2451 & sidechain green yellow target a
    68980 
    68981 > hbonds #14.5/a:2491/v:1-3 interModel false restrict #14.5 &
    68982 > #14.5/a:2491,2494 :< 4 color cyan
    68983 
    68984 3 hydrogen bonds found 
    68985 
    68986 > show #14.5/a:2518 & sidechain
    68987 
    68988 > show #14.5/v:1-5
    68989 
    68990 > color #14.5/v medium orchid
    68991 
    68992 > hide #14.6
    68993 
    68994 > ~cartoon #14.6
    68995 
    68996 > cartoon #14.6/a:2449-2463,2487-2501
    68997 
    68998 > show #14.6/a:2491,2457,2498,2451,2449-2463,2487-2501
    68999 
    69000 > color #14.6 plum
    69001 
    69002 > color #14.6/a:2491 & sidechain medium violet red target a
    69003 
    69004 > color #14.6/a:2457,2498,2501,2449 & sidechain orange target a
    69005 
    69006 > color #14.6/a:2451 & sidechain green yellow target a
    69007 
    69008 > hbonds #14.6/a:2491/v:1-3 interModel false restrict #14.6 &
    69009 > #14.6/a:2491,2494 :< 4 color cyan
    69010 
    69011 3 hydrogen bonds found 
    69012 
    69013 > show #14.6/a:2518 & sidechain
    69014 
    69015 > show #14.6/v:1-5
    69016 
    69017 > color #14.6/v medium orchid
    69018 
    69019 > hide #14.7
    69020 
    69021 > ~cartoon #14.7
    69022 
    69023 > cartoon #14.7/a:2449-2463,2487-2501
    69024 
    69025 > show #14.7/a:2491,2457,2498,2451,2449-2463,2487-2501
    69026 
    69027 > color #14.7 plum
    69028 
    69029 > color #14.7/a:2491 & sidechain medium violet red target a
    69030 
    69031 > color #14.7/a:2457,2498,2501,2449 & sidechain orange target a
    69032 
    69033 > color #14.7/a:2451 & sidechain green yellow target a
    69034 
    69035 > hbonds #14.7/a:2491/v:1-3 interModel false restrict #14.7 &
    69036 > #14.7/a:2491,2494 :< 4 color cyan
    69037 
    69038 3 hydrogen bonds found 
    69039 
    69040 > show #14.7/a:2518 & sidechain
    69041 
    69042 > show #14.7/v:1-5
    69043 
    69044 > color #14.7/v medium orchid
    69045 
    69046 > hide #14.8
    69047 
    69048 > ~cartoon #14.8
    69049 
    69050 > cartoon #14.8/a:2449-2463,2487-2501
    69051 
    69052 > show #14.8/a:2491,2457,2498,2451,2449-2463,2487-2501
    69053 
    69054 > color #14.8 plum
    69055 
    69056 > color #14.8/a:2491 & sidechain medium violet red target a
    69057 
    69058 > color #14.8/a:2457,2498,2501,2449 & sidechain orange target a
    69059 
    69060 > color #14.8/a:2451 & sidechain green yellow target a
    69061 
    69062 > hbonds #14.8/a:2491/v:1-3 interModel false restrict #14.8 &
    69063 > #14.8/a:2491,2494 :< 4 color cyan
    69064 
    69065 4 hydrogen bonds found 
    69066 
    69067 > show #14.8/a:2518 & sidechain
    69068 
    69069 > show #14.8/v:1-5
    69070 
    69071 > color #14.8/v medium orchid
    69072 
    69073 > hide #14.10
    69074 
    69075 > ~cartoon #14.10
    69076 
    69077 > cartoon #14.10/a:2449-2463,2487-2501
    69078 
    69079 > show #14.10/a:2491,2457,2498,2451,2449-2463,2487-2501
    69080 
    69081 > color #14.10 plum
    69082 
    69083 > color #14.10/a:2491 & sidechain medium violet red target a
    69084 
    69085 > color #14.10/a:2457,2498,2501,2449 & sidechain orange target a
    69086 
    69087 > color #14.10/a:2451 & sidechain green yellow target a
    69088 
    69089 > hbonds #14.10/a:2491/v:1-3 interModel false restrict #14.10 &
    69090 > #14.10/a:2491,2494 :< 4 color cyan
    69091 
    69092 3 hydrogen bonds found 
    69093 
    69094 > show #14.10/a:2518 & sidechain
    69095 
    69096 > show #14.10/v:1-5
    69097 
    69098 > color #14.10/v medium orchid
    69099 
    69100 > hide #!14.3 models
    69101 
    69102 > show #!14.1 models
    69103 
    69104 > view H89
    69105 
    69106 > show #!1.2 models
    69107 
    69108 > hide #!14.1 models
    69109 
    69110 > show #!14.1 models
    69111 
    69112 > hide #!14.1 models
    69113 
    69114 > show #!14.1 models
    69115 
    69116 > hide #!14.1 models
    69117 
    69118 > show #!14.1 models
    69119 
    69120 > hide #!14.1 models
    69121 
    69122 > show #!14.1 models
    69123 
    69124 > hide #!14.1 models
    69125 
    69126 > show #!14.1 models
    69127 
    69128 > hide #!14.1 models
    69129 
    69130 > show #!14.1 models
    69131 
    69132 > hide #!1.2 models
    69133 
    69134 > show #!1.2 models
    69135 
    69136 > hide #!1.2 models
    69137 
    69138 > show #!1.2 models
    69139 
    69140 > hide #!1.2 models
    69141 
    69142 > show #!1.2 models
    69143 
    69144 > hide #!1.2 models
    69145 
    69146 > show #!1.2 models
    69147 
    69148 > hide #!1.2 models
    69149 
    69150 > show #!6.1 models
    69151 
    69152 > hide #!6.1 models
    69153 
    69154 > show #!6.1 models
    69155 
    69156 > hide #!6.1 models
    69157 
    69158 > show #!6.1 models
    69159 
    69160 > hide #!6.1 models
    69161 
    69162 > show #!6.1 models
    69163 
    69164 > hide #!6.1 models
    69165 
    69166 > show #!6.1 models
    69167 
    69168 > hide #!6.1 models
    69169 
    69170 > show #!6.1 models
    69171 
    69172 > hide #!6.1 models
    69173 
    69174 > show #!1.2 models
    69175 
    69176 > hide #!1.2 models
    69177 
    69178 > hide #!14.1 models
    69179 
    69180 > show #!14.2 models
    69181 
    69182 > hide #!14.2 models
    69183 
    69184 > show #!14.2 models
    69185 
    69186 > hide #!14.2 models
    69187 
    69188 > show #!14.3 models
    69189 
    69190 > hide #!14.3 models
    69191 
    69192 > show #!14.3 models
    69193 
    69194 > hide #!14.3 models
    69195 
    69196 > show #!14.2 models
    69197 
    69198 > hide #!14.2 models
    69199 
    69200 > show #!14.2 models
    69201 
    69202 > hide #!14.2 models
    69203 
    69204 > show #!14.1 models
    69205 
    69206 > hide #!14.1 models
    69207 
    69208 > show #!14.4 models
    69209 
    69210 > hide #!14.4 models
    69211 
    69212 > show #!14.5 models
    69213 
    69214 > hide #!14.5 models
    69215 
    69216 > show #!14.6 models
    69217 
    69218 > hide #!14.6 models
    69219 
    69220 > show #!14.7 models
    69221 
    69222 > hide #!14.7 models
    69223 
    69224 > show #!14.8 models
    69225 
    69226 > hide #!14.8 models
    69227 
    69228 > show #!14.9 models
    69229 
    69230 > hide #!14.9 models
    69231 
    69232 > show #!14.9 models
    69233 
    69234 > hide #!14.9 models
    69235 
    69236 > show #!14.10 models
    69237 
    69238 > hide #!14.10 models
    69239 
    69240 > show #!14.10 models
    69241 
    69242 > hide #!14.10 models
    69243 
    69244 > show #!25.1 models
    69245 
    69246 > hide #25.1
    69247 
    69248 > ~cartoon #25.1
    69249 
    69250 > cartoon #25.1/a:2449-2463,2487-2501
    69251 
    69252 > show #25.1/a:2491,2457,2498,2451,2449-2463,2487-2501
    69253 
    69254 > color #25.1 pale green
    69255 
    69256 > color #25.1/a:2491 & sidechain lime target a
    69257 
    69258 > color #25.1/a:2457,2498,2501,2449 & sidechain orange target a
    69259 
    69260 > color #25.1/a:2451 & sidechain green yellow target a
    69261 
    69262 > hbonds #25.1/a:2491/v:1-3 interModel false restrict #25.1& #25.1/a:2491,2494
    69263 > :< 4 color dark orange
    69264 
    69265 5 hydrogen bonds found 
    69266 
    69267 > show #25.1/a:2518 & sidechain
    69268 
    69269 > show #25.1/v:1-5
    69270 
    69271 > color #25.1/v medium spring green
    69272 
    69273 > hide #25.2
    69274 
    69275 > ~cartoon #25.2
    69276 
    69277 > cartoon #25.2/a:2449-2463,2487-2501
    69278 
    69279 > show #25.2/a:2491,2457,2498,2451,2449-2463,2487-2501
    69280 
    69281 > color #25.2 pale green
    69282 
    69283 > color #25.2/a:2491 & sidechain lime target a
    69284 
    69285 > color #25.2/a:2457,2498,2501,2449 & sidechain orange target a
    69286 
    69287 > color #25.2/a:2451 & sidechain green yellow target a
    69288 
    69289 > hbonds #25.2/a:2491/v:1-3 interModel false restrict #25.2& #25.2/a:2491,2494
    69290 > :< 4 color dark orange
    69291 
    69292 7 hydrogen bonds found 
    69293 
    69294 > show #25.2/a:2518 & sidechain
    69295 
    69296 > show #25.2/v:1-5
    69297 
    69298 > color #25.2/v medium spring green
    69299 
    69300 > hide #25.3
    69301 
    69302 > ~cartoon #25.3
    69303 
    69304 > cartoon #25.3/a:2449-2463,2487-2501
    69305 
    69306 > show #25.3/a:2491,2457,2498,2451,2449-2463,2487-2501
    69307 
    69308 > color #25.3 pale green
    69309 
    69310 > color #25.3/a:2491 & sidechain lime target a
    69311 
    69312 > color #25.3/a:2457,2498,2501,2449 & sidechain orange target a
    69313 
    69314 > color #25.3/a:2451 & sidechain green yellow target a
    69315 
    69316 > hbonds #25.3/a:2491/v:1-3 interModel false restrict #25.3& #25.3/a:2491,2494
    69317 > :< 4 color dark orange
    69318 
    69319 4 hydrogen bonds found 
    69320 
    69321 > show #25.3/a:2518 & sidechain
    69322 
    69323 > show #25.3/v:1-5
    69324 
    69325 > color #25.3/v medium spring green
    69326 
    69327 > hide #25.4
    69328 
    69329 > ~cartoon #25.4
    69330 
    69331 > cartoon #25.4/a:2449-2463,2487-2501
    69332 
    69333 > show #25.4/a:2491,2457,2498,2451,2449-2463,2487-2501
    69334 
    69335 > color #25.4 pale green
    69336 
    69337 > color #25.4/a:2491 & sidechain lime target a
    69338 
    69339 > color #25.4/a:2457,2498,2501,2449 & sidechain orange target a
    69340 
    69341 > color #25.4/a:2451 & sidechain green yellow target a
    69342 
    69343 > hbonds #25.4/a:2491/v:1-3 interModel false restrict #25.4& #25.4/a:2491,2494
    69344 > :< 4 color dark orange
    69345 
    69346 5 hydrogen bonds found 
    69347 
    69348 > show #25.4/a:2518 & sidechain
    69349 
    69350 > show #25.4/v:1-5
    69351 
    69352 > color #25.4/v medium spring green
    69353 
    69354 > hide #25.5
    69355 
    69356 > ~cartoon #25.5
    69357 
    69358 > cartoon #25.5/a:2449-2463,2487-2501
    69359 
    69360 > show #25.5/a:2491,2457,2498,2451,2449-2463,2487-2501
    69361 
    69362 > color #25.5 pale green
    69363 
    69364 > color #25.5/a:2491 & sidechain lime target a
    69365 
    69366 > color #25.5/a:2457,2498,2501,2449 & sidechain orange target a
    69367 
    69368 > color #25.5/a:2451 & sidechain green yellow target a
    69369 
    69370 > hbonds #25.5/a:2491/v:1-3 interModel false restrict #25.5& #25.5/a:2491,2494
    69371 > :< 4 color dark orange
    69372 
    69373 4 hydrogen bonds found 
    69374 
    69375 > show #25.5/a:2518 & sidechain
    69376 
    69377 > show #25.5/v:1-5
    69378 
    69379 > color #25.5/v medium spring green
    69380 
    69381 > hide #25.6
    69382 
    69383 > ~cartoon #25.6
    69384 
    69385 > cartoon #25.6/a:2449-2463,2487-2501
    69386 
    69387 > show #25.6/a:2491,2457,2498,2451,2449-2463,2487-2501
    69388 
    69389 > color #25.6 pale green
    69390 
    69391 > color #25.6/a:2491 & sidechain lime target a
    69392 
    69393 > color #25.6/a:2457,2498,2501,2449 & sidechain orange target a
    69394 
    69395 > color #25.6/a:2451 & sidechain green yellow target a
    69396 
    69397 > hbonds #25.6/a:2491/v:1-3 interModel false restrict #25.6& #25.6/a:2491,2494
    69398 > :< 4 color dark orange
    69399 
    69400 5 hydrogen bonds found 
    69401 
    69402 > show #25.6/a:2518 & sidechain
    69403 
    69404 > show #25.6/v:1-5
    69405 
    69406 > color #25.6/v medium spring green
    69407 
    69408 > hide #25.7
    69409 
    69410 > ~cartoon #25.7
    69411 
    69412 > cartoon #25.7/a:2449-2463,2487-2501
    69413 
    69414 > show #25.7/a:2491,2457,2498,2451,2449-2463,2487-2501
    69415 
    69416 > color #25.7 pale green
    69417 
    69418 > color #25.7/a:2491 & sidechain lime target a
    69419 
    69420 > color #25.7/a:2457,2498,2501,2449 & sidechain orange target a
    69421 
    69422 > color #25.7/a:2451 & sidechain green yellow target a
    69423 
    69424 > hbonds #25.7/a:2491/v:1-3 interModel false restrict #25.7& #25.7/a:2491,2494
    69425 > :< 4 color dark orange
    69426 
    69427 3 hydrogen bonds found 
    69428 
    69429 > show #25.7/a:2518 & sidechain
    69430 
    69431 > show #25.7/v:1-5
    69432 
    69433 > color #25.7/v medium spring green
    69434 
    69435 > hide #25.8
    69436 
    69437 > ~cartoon #25.8
    69438 
    69439 > cartoon #25.8/a:2449-2463,2487-2501
    69440 
    69441 > show #25.8/a:2491,2457,2498,2451,2449-2463,2487-2501
    69442 
    69443 > color #25.8 pale green
    69444 
    69445 > color #25.8/a:2491 & sidechain lime target a
    69446 
    69447 > color #25.8/a:2457,2498,2501,2449 & sidechain orange target a
    69448 
    69449 > color #25.8/a:2451 & sidechain green yellow target a
    69450 
    69451 > hbonds #25.8/a:2491/v:1-3 interModel false restrict #25.8& #25.8/a:2491,2494
    69452 > :< 4 color dark orange
    69453 
    69454 5 hydrogen bonds found 
    69455 
    69456 > show #25.8/a:2518 & sidechain
    69457 
    69458 > show #25.8/v:1-5
    69459 
    69460 > color #25.8/v medium spring green
    69461 
    69462 > hide #25.9
    69463 
    69464 > ~cartoon #25.9
    69465 
    69466 > cartoon #25.9/a:2449-2463,2487-2501
    69467 
    69468 > show #25.9/a:2491,2457,2498,2451,2449-2463,2487-2501
    69469 
    69470 > color #25.9 pale green
    69471 
    69472 > color #25.9/a:2491 & sidechain lime target a
    69473 
    69474 > color #25.9/a:2457,2498,2501,2449 & sidechain orange target a
    69475 
    69476 > color #25.9/a:2451 & sidechain green yellow target a
    69477 
    69478 > hbonds #25.9/a:2491/v:1-3 interModel false restrict #25.9& #25.9/a:2491,2494
    69479 > :< 4 color dark orange
    69480 
    69481 5 hydrogen bonds found 
    69482 
    69483 > show #25.9/a:2518 & sidechain
    69484 
    69485 > show #25.9/v:1-5
    69486 
    69487 > color #25.9/v medium spring green
    69488 
    69489 > hide #25.10
    69490 
    69491 > ~cartoon #25.10
    69492 
    69493 > cartoon #25.10/a:2449-2463,2487-2501
    69494 
    69495 > show #25.10/a:2491,2457,2498,2451,2449-2463,2487-2501
    69496 
    69497 > color #25.10 pale green
    69498 
    69499 > color #25.10/a:2491 & sidechain lime target a
    69500 
    69501 > color #25.10/a:2457,2498,2501,2449 & sidechain orange target a
    69502 
    69503 > color #25.10/a:2451 & sidechain green yellow target a
    69504 
    69505 > hbonds #25.10/a:2491/v:1-3 interModel false restrict #25.10&
    69506 > #25.10/a:2491,2494 :< 4 color dark orange
    69507 
    69508 5 hydrogen bonds found 
    69509 
    69510 > show #25.10/a:2518 & sidechain
    69511 
    69512 > show #25.10/v:1-5
    69513 
    69514 > color #25.10/v medium spring green
    69515 
    69516 > hide #!25.1 models
    69517 
    69518 > show #!25.2 models
    69519 
    69520 > hide #!25.2 models
    69521 
    69522 > show #!25.3 models
    69523 
    69524 > hide #!25.3 models
    69525 
    69526 > show #!25.4 models
    69527 
    69528 > hide #!25.4 models
    69529 
    69530 > show #!25.5 models
    69531 
    69532 > hide #!25.5 models
    69533 
    69534 > show #!25.5 models
    69535 
    69536 > hide #!25.5 models
    69537 
    69538 > show #!25.6 models
    69539 
    69540 > hide #!25.6 models
    69541 
    69542 > show #!25.8 models
    69543 
    69544 > show #!25.7 models
    69545 
    69546 > hide #!25.8 models
    69547 
    69548 > show #!25.8 models
    69549 
    69550 > hide #!25.7 models
    69551 
    69552 > show #!25.9 models
    69553 
    69554 > hide #!25.8 models
    69555 
    69556 > show #!25.10 models
    69557 
    69558 > hide #!25.9 models
    69559 
    69560 > hide #25.5
    69561 
    69562 > ~cartoon #25.5
    69563 
    69564 > cartoon #25.5/a:2449-2463,2487-2501
    69565 
    69566 > show #25.5/a:2491,2457,2498,2451,2449-2463,2487-2501
    69567 
    69568 > color #25.5 plum
    69569 
    69570 > color #25.5/a:2491 & sidechain medium violet red target a
    69571 
    69572 > color #25.5/a:2457,2498,2501,2449 & sidechain orange target a
    69573 
    69574 > color #25.5/a:2451 & sidechain green yellow target a
    69575 
    69576 > show #25.5/a:2518 & sidechain
    69577 
    69578 > show #25.5/v:1-5
    69579 
    69580 > color #25.5/v medium orchid
    69581 
    69582 > hide #25.7
    69583 
    69584 > ~cartoon #25.7
    69585 
    69586 > cartoon #25.7/a:2449-2463,2487-2501
    69587 
    69588 > show #25.7/a:2491,2457,2498,2451,2449-2463,2487-2501
    69589 
    69590 > color #25.7 plum
    69591 
    69592 > color #25.7/a:2491 & sidechain medium violet red target a
    69593 
    69594 > color #25.7/a:2457,2498,2501,2449 & sidechain orange target a
    69595 
    69596 > color #25.7/a:2451 & sidechain green yellow target a
    69597 
    69598 > show #25.7/a:2518 & sidechain
    69599 
    69600 > show #25.7/v:1-5
    69601 
    69602 > color #25.7/v medium orchid
    69603 
    69604 > show #!25.7 models
    69605 
    69606 > hide #!25.10 models
    69607 
    69608 > show #!25.4 models
    69609 
    69610 > hide #!25.7 models
    69611 
    69612 > show #!25.7 models
    69613 
    69614 > hide #!25.7 models
    69615 
    69616 > show #!25.7 models
    69617 
    69618 > hide #!25.7 models
    69619 
    69620 > show #!25.7 models
    69621 
    69622 > hide #!25.4 models
    69623 
    69624 > show #!25.4 models
    69625 
    69626 > hide #!25.7 models
    69627 
    69628 > show #!25.5 models
    69629 
    69630 > hide #!25.4 models
    69631 
    69632 > show #!25.4 models
    69633 
    69634 > hide #!25.4 models
    69635 
    69636 > show #!25.4 models
    69637 
    69638 > hide #!25.4 models
    69639 
    69640 > show #!25.4 models
    69641 
    69642 > hide #!25.4 models
    69643 
    69644 > hide #!25.5 models
    69645 
    69646 > show #!25.1 models
    69647 
    69648 > hide #!25.1 models
    69649 
    69650 > show #!25.2 models
    69651 
    69652 > hide #!25.2 models
    69653 
    69654 > show #!25.3 models
    69655 
    69656 > hide #!25.3 models
    69657 
    69658 > show #!25.3 models
    69659 
    69660 > hide #!25.3 models
    69661 
    69662 > show #!25.4 models
    69663 
    69664 > hide #!25.4 models
    69665 
    69666 > show #!25.5 models
    69667 
    69668 > hide #!25.5 models
    69669 
    69670 > show #!25.6 models
    69671 
    69672 > hide #!25.6 models
    69673 
    69674 > show #!25.7 models
    69675 
    69676 > hide #!25.7 models
    69677 
    69678 > show #!25.8 models
    69679 
    69680 > hide #!25.8 models
    69681 
    69682 > show #!25.9 models
    69683 
    69684 > hide #!25.9 models
    69685 
    69686 > show #!25.10 models
    69687 
    69688 > hide #!25.10 models
    69689 
    69690 > show #!25.10 models
    69691 
    69692 > hide #!25.10 models
    69693 
    69694 > show #!25.10 models
    69695 
    69696 > color #25.10 white
    69697 
    69698 > color #25.10/a:2491 & sidechain teal target a
    69699 
    69700 > color #25.10/a:2457,2498,2501,2449 & sidechain orange target a
    69701 
    69702 > color #25.10/a:2451 & sidechain green yellow target a
    69703 
    69704 > color #25.10/v medium aquamarine
    69705 
    69706 > color #25.10 dark orange target p
    69707 
    69708 > color #6.* white
    69709 
    69710 > color #6.*#14.*#25.* white
    69711 
    69712 > color #6.*#14.*#25.*/a:2457,2498,2501,2449 & sidechain orange target a
    69713 
    69714 > color #6.*#14.*#25.* white
    69715 
    69716 > color #6.*#14.*#25.*/a:2457,2498,2501,2449 & sidechain orange target a
    69717 
    69718 > color #6.*#14.*#25.*/a:2451 & sidechain green yellow target a
    69719 
    69720 > color #6.*#14.*#25.*/v medium aquamarine
    69721 
    69722 > color #6.*/a:2491 & sidechain medium orchid target a
    69723 
    69724 > color #6.1#6.2#6.7/a:2491 & sidechain teal target a
    69725 
    69726 > color #14.*/a:2491 & sidechain medium orchid target a
    69727 
    69728 > color #14.3#14.9/a:2491 & sidechain teal target a
    69729 
    69730 > color #25.*/a:2491 & sidechain teal target a
    69731 
    69732 > color #25.5#25.7/a:2491 & sidechain medium orchid target a
    69733 
    69734 > show #!6.1 models
    69735 
    69736 > hide #!6.1 models
    69737 
    69738 > hide #!25.10 models
    69739 
    69740 > show #!25.1 models
    69741 
    69742 > hide #!25.1 models
    69743 
    69744 > show #!25.2 models
    69745 
    69746 > hide #!25.2 models
    69747 
    69748 > show #!25.3 models
    69749 
    69750 > hide #!25.3 models
    69751 
    69752 > show #!25.4 models
    69753 
    69754 > hide #!25.4 models
    69755 
    69756 > show #!25.5 models
    69757 
    69758 > hide #!25.5 models
    69759 
    69760 > show #!25.5 models
    69761 
    69762 > hide #!25.5 models
    69763 
    69764 > show #!25.5 models
    69765 
    69766 > color #6.*#14.*#25.* white
    69767 
    69768 > color #25.5#25.7/a:2491 & sidechain medium orchid target a
    69769 
    69770 > color #6.*#14.*#25.* white
    69771 
    69772 > color #25.5/a:2491 & sidechain medium orchid target a
    69773 
    69774 > show #!14.3 models
    69775 
    69776 > hide #!14.3 models
    69777 
    69778 > show #!14.4 models
    69779 
    69780 > hide #!14.4 models
    69781 
    69782 > show #!14.5 models
    69783 
    69784 > hide #!14.5 models
    69785 
    69786 > color #14.*/a:2491 & sidechain medium orchid target a
    69787 
    69788 > color #14.3#14.9/a:2491 & sidechain teal target a
    69789 
    69790 > hide #!25.5 models
    69791 
    69792 > show #!14.1 models
    69793 
    69794 > hide #!14.1 models
    69795 
    69796 > show #!14.2 models
    69797 
    69798 > hide #!14.2 models
    69799 
    69800 > show #!14.3 models
    69801 
    69802 > hide #!14.3 models
    69803 
    69804 > show #!14.3 models
    69805 
    69806 > hide #!14.3 models
    69807 
    69808 > show #!14.3 models
    69809 
    69810 > hide #!14.3 models
    69811 
    69812 > show #!14.3 models
    69813 
    69814 > hide #!14.3 models
    69815 
    69816 > show #!14.4 models
    69817 
    69818 > hide #!14.4 models
    69819 
    69820 > show #!14.5 models
    69821 
    69822 > hide #!14.5 models
    69823 
    69824 > show #!14.6 models
    69825 
    69826 > hide #!14.6 models
    69827 
    69828 > show #!14.7 models
    69829 
    69830 > hide #!14.7 models
    69831 
    69832 > show #!14.8 models
    69833 
    69834 > hide #!14.8 models
    69835 
    69836 > show #!14.9 models
    69837 
    69838 > hide #!14.9 models
    69839 
    69840 > show #!14.10 models
    69841 
    69842 > hide #!14.10 models
    69843 
    69844 > show #!14.9 models
    69845 
    69846 > hide #!14.9 models
    69847 
    69848 > show #!25.10 models
    69849 
    69850 > hide #!25.10 models
    69851 
    69852 > show #!25.9 models
    69853 
    69854 > hide #!25.9 models
    69855 
    69856 > show #!25.8 models
    69857 
    69858 > hide #!25.8 models
    69859 
    69860 > show #!25.7 models
    69861 
    69862 > hide #!25.7 models
    69863 
    69864 > show #!25.6 models
    69865 
    69866 > hide #!25.6 models
    69867 
    69868 > show #!25.5 models
    69869 
    69870 > hide #!25.5 models
    69871 
    69872 > show #!25.5 models
    69873 
    69874 > hide #!25.5 models
    69875 
    69876 > show #!25.4 models
    69877 
    69878 > hide #!25.4 models
    69879 
    69880 > show #!25.3 models
    69881 
    69882 > hide #!25.3 models
    69883 
    69884 > show #!25.2 models
    69885 
    69886 > hide #!25.2 models
    69887 
    69888 > show #!25.1 models
    69889 
    69890 > hide #!25.1 models
    69891 
    69892 > color #6.*#14.*#25.* white
    69893 
    69894 > color (#25.5#25.7/a:2491) & sidechain medium orchid target a
    69895 
    69896 > show #!25.4 models
    69897 
    69898 > hide #!25.4 models
    69899 
    69900 > show #!25.4 models
    69901 
    69902 > show #!25.5 models
    69903 
    69904 > hide #!25.4 models
    69905 
    69906 > hide #!25.5 models
    69907 
    69908 > show #!25.5 models
    69909 
    69910 > hide #!25.5 models
    69911 
    69912 > show #!25.5 models
    69913 
    69914 > color #6.*#14.*#25.* white
    69915 
    69916 > color (#25.5/a:2491) & sidechain medium orchid target a
    69917 
    69918 > color #6.*#14.*#25.* white
    69919 
    69920 > color #25.5/a:2491 & sidechain medium orchid target a
    69921 
    69922 > color #6.*#14.*#25.* white
    69923 
    69924 > color #6.*#14.*#25.*/a:2457,2498,2501,2449 & sidechain orange target a
    69925 
    69926 > color #6.*#14.*#25.*/a:2451 & sidechain green yellow target a
    69927 
    69928 > color #6.*#14.*#25.*/v medium aquamarine
    69929 
    69930 > color #6.*/a:2491 & sidechain medium orchid target a
    69931 
    69932 > color #14.*/a:2491 & sidechain medium orchid target a
    69933 
    69934 > color #25.*/a:2491 & sidechain teal target a
    69935 
    69936 > color #6.1/a:2491 & sidechain teal target a
    69937 
    69938 > color #6.2/a:2491 & sidechain teal target a
    69939 
    69940 > color #6.7/a:2491 & sidechain teal target a
    69941 
    69942 > color #14.3/a:2491 & sidechain teal target a
    69943 
    69944 > color #14.9/a:2491 & sidechain teal target a
    69945 
    69946 > color #25.5/a:2491 & sidechain medium orchid target a
    69947 
    69948 > color #25.7/a:2491 & sidechain medium orchid target a
    69949 
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    69951 
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    69985 
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    69987 
    69988 > show #!25.10 models
    69989 
    69990 > color #6.*#14.*#25.* dark orange target p
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    69993 
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    69995 
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    70012 > color #6.*#14.*#25.* yellow target p
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    70017 
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    70043 
    70044 > show #!6.4 models
    70045 
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    70047 
    70048 > color #6.*#14.*#25.* white
    70049 
    70050 > color #6.*#14.*#25.*/a:2457,2498,2501,2449 & sidechain orange target a
    70051 
    70052 > color #6.*#14.*#25.*/a:2451 & sidechain green yellow target a
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    70054 > color #6.*#14.*#25.*/v medium aquamarine
    70055 
    70056 > color #6.*/a:2491 & sidechain medium orchid target a
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    70058 > color #14.*/a:2491 & sidechain medium orchid target a
    70059 
    70060 > color #25.*/a:2491 & sidechain teal target a
    70061 
    70062 > color #6.1/a:2491 & sidechain teal target a
    70063 
    70064 > color #6.2/a:2491 & sidechain teal target a
    70065 
    70066 > color #6.7/a:2491 & sidechain teal target a
    70067 
    70068 > color #14.3/a:2491 & sidechain teal target a
    70069 
    70070 > color #14.9/a:2491 & sidechain teal target a
    70071 
    70072 > color #25.5/a:2491 & sidechain medium orchid target a
    70073 
    70074 > color #25.7/a:2491 & sidechain medium orchid target a
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    70076 > color #6.*#14.*#25.* yellow target p
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    70109 
    70110 > color #6.*#14.*#25.* white
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    70112 > color #6.*#14.*#25.*/a:2457,2498,2501,2449 & sidechain orange target a
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    70115 
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    70121 
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    70123 
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    70125 
    70126 > color #6.*#14.*#25.* white
    70127 
    70128 > color #6.*#14.*#25.*/a:2457,2498,2501,2449 & sidechain orange target a
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    70141 
    70142 > color #6.*#14.*#25.* white
    70143 
    70144 > color #6.*#14.*#25.*/v medium aquamarine
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    70146 > color #6.*#14.*#25.* yellow target p
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    70148 > color #6.*/a:2457,2498,2501,2449 & sidechain orange target a
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    70150 > color #14.*/a:2457,2498,2501,2449 & sidechain orange target a
    70151 
    70152 > color #25.*/a:2457,2498,2501,2449 & sidechain orange target a
    70153 
    70154 > color #6.*/a:2451 & sidechain green yellow target a
    70155 
    70156 > color #14.*/a:2451 & sidechain green yellow target a
    70157 
    70158 > color #25.*/a:2451 & sidechain green yellow target a
    70159 
    70160 > color #6.*/a:2491 & sidechain medium orchid target a
    70161 
    70162 > color #14.*/a:2491 & sidechain medium orchid target a
    70163 
    70164 > color #25.*/a:2491 & sidechain teal target a
    70165 
    70166 > color #6.1/a:2491 & sidechain teal target a
    70167 
    70168 > color #6.2/a:2491 & sidechain teal target a
    70169 
    70170 > color #6.7/a:2491 & sidechain teal target a
    70171 
    70172 > color #14.3/a:2491 & sidechain teal target a
    70173 
    70174 > color #14.9/a:2491 & sidechain teal target a
    70175 
    70176 > color #25.5/a:2491 & sidechain medium orchid target a
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    70178 > color #25.7/a:2491 & sidechain medium orchid target a
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    70189 
    70190 > show #!6.2 models
    70191 
    70192 > color #6.*#14.*#25.* white
    70193 
    70194 > color #6.*#14.*#25.*/v medium aquamarine
    70195 
    70196 > color #6.*#14.*#25.* yellow target p
    70197 
    70198 > color #6.*/v#14.*/v#25.*/v medium aquamarine
    70199 
    70200 > color #6.*#14.*#25.* white
    70201 
    70202 > color #6.*#14.*#25.* yellow target p
    70203 
    70204 > color #6.*/v medium aquamarine
    70205 
    70206 > color #14.*/v medium aquamarine
    70207 
    70208 > color #25.*/v medium aquamarine
    70209 
    70210 > color #6.*#14.*#25.* white
    70211 
    70212 > color #6.*#14.*#25.* yellow target p
    70213 
    70214 > color #6.*/a:2457,2498,2501,2449 & sidechain orange target a
    70215 
    70216 > color #14.*/a:2457,2498,2501,2449 & sidechain orange target a
    70217 
    70218 > color #25.*/a:2457,2498,2501,2449 & sidechain orange target a
    70219 
    70220 > color #6.*/a:2451 & sidechain green yellow target a
    70221 
    70222 > color #14.*/a:2451 & sidechain green yellow target a
    70223 
    70224 > color #25.*/a:2451 & sidechain green yellow target a
    70225 
    70226 > color #6.*/a:2491 & sidechain medium orchid target a
    70227 
    70228 > color #14.*/a:2491 & sidechain medium orchid target a
    70229 
    70230 > color #25.*/a:2491 & sidechain teal target a
    70231 
    70232 > color #6.*/v medium aquamarine
    70233 
    70234 > color #14.*/v medium aquamarine
    70235 
    70236 > color #25.*/v medium aquamarine
    70237 
    70238 > color #6.1/a:2491 & sidechain teal target a
    70239 
    70240 > color #6.2/a:2491 & sidechain teal target a
    70241 
    70242 > color #6.7/a:2491 & sidechain teal target a
    70243 
    70244 > color #14.3/a:2491 & sidechain teal target a
    70245 
    70246 > color #14.9/a:2491 & sidechain teal target a
    70247 
    70248 > color #25.5/a:2491 & sidechain medium orchid target a
    70249 
    70250 > color #25.7/a:2491 & sidechain medium orchid target a
    70251 
    70252 > show #!6.3 models
    70253 
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    70255 
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    70261 
    70262 > show #!6.5 models
    70263 
    70264 > hide #!6.4 models
    70265 
    70266 > show #!6.6 models
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    70269 
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    70271 
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    70273 
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    70275 
    70276 > hide #!6.7 models
    70277 
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    70281 
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    70288 > hide #!6.8 models
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    70301 
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    70305 
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    70351 
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    70357 > 800 supersample 4
    70358 
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    70365 
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    70372 
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    70378 > 800 supersample 4
    70379 
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    70385 > 800 supersample 4
    70386 
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    70389 > show #!6.9 models
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    70392 > 800 supersample 4
    70393 
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    70400 
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    70407 
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    70414 
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    70417 > show #!6.3 models
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    70419 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class3.png width 580 height
    70420 > 800 supersample 4
    70421 
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    70424 > show #!6.4 models
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    70426 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class4.png width 580 height
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    70428 
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    70430 
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    70433 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class5.png width 580 height
    70434 > 800 supersample 4
    70435 
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    70437 
    70438 > show #!6.6 models
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    70441 > 800 supersample 4
    70442 
    70443 > hide #!6.6 models
    70444 
    70445 > show #!6.7 models
    70446 
    70447 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class7.png width 580 height
    70448 > 800 supersample 4
    70449 
    70450 > hide #!6.7 models
    70451 
    70452 > show #!6.8 models
    70453 
    70454 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class8.png width 580 height
    70455 > 800 supersample 4
    70456 
    70457 > hide #!6.8 models
    70458 
    70459 > show #!6.9 models
    70460 
    70461 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class9.png width 580 height
    70462 > 800 supersample 4
    70463 
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    70465 
    70466 > show #!1.16 models
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    70469 > supersample 4
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    70471 > hide #!1.16 models
    70472 
    70473 > transparency #1.2 80 target c
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    70475 > show #!1.16 models
    70476 
    70477 > save /Users/dalar193/Desktop/H89_U2491/H89-5MDZ.png width 580 height 800
    70478 > supersample 4
    70479 
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    70481 
    70482 > show #!6.10 models
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    70484 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class0.png width 580 height
    70485 > 800 supersample 4
    70486 
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    70488 
    70489 > show #!6.1 models
    70490 
    70491 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class1.png width 580 height
    70492 > 800 supersample 4
    70493 
    70494 > hide #!6.1 models
    70495 
    70496 > show #!6.2 models
    70497 
    70498 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class2.png width 580 height
    70499 > 800 supersample 4
    70500 
    70501 > hide #!6.2 models
    70502 
    70503 > show #!6.3 models
    70504 
    70505 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class3.png width 580 height
    70506 > 800 supersample 4
    70507 
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    70509 
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    70512 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class4.png width 580 height
    70513 > 800 supersample 4
    70514 
    70515 > hide #!6.4 models
    70516 
    70517 > show #!6.5 models
    70518 
    70519 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class5.png width 580 height
    70520 > 800 supersample 4
    70521 
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    70523 
    70524 > show #!6.6 models
    70525 
    70526 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class6.png width 580 height
    70527 > 800 supersample 4
    70528 
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    70530 
    70531 > show #!6.7 models
    70532 
    70533 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class7.png width 580 height
    70534 > 800 supersample 4
    70535 
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    70537 
    70538 > show #!6.8 models
    70539 
    70540 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class8.png width 580 height
    70541 > 800 supersample 4
    70542 
    70543 > hide #!6.8 models
    70544 
    70545 > show #!6.9 models
    70546 
    70547 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class9.png width 580 height
    70548 > 800 supersample 4
    70549 
    70550 > hide #!6.9 models
    70551 
    70552 > color #6.*#14.*#25.* light gray
    70553 
    70554 > color #6.*#14.*#25.* yellow target p
    70555 
    70556 > color #6.*/a:2457,2498,2501,2449 & sidechain orange target a
    70557 
    70558 > color #14.*/a:2457,2498,2501,2449 & sidechain orange target a
    70559 
    70560 > color #25.*/a:2457,2498,2501,2449 & sidechain orange target a
    70561 
    70562 > color #6.*/a:2451 & sidechain green yellow target a
    70563 
    70564 > color #14.*/a:2451 & sidechain green yellow target a
    70565 
    70566 > color #25.*/a:2451 & sidechain green yellow target a
    70567 
    70568 > color #6.*/a:2491 & sidechain medium orchid target a
    70569 
    70570 > color #14.*/a:2491 & sidechain medium orchid target a
    70571 
    70572 > color #25.*/a:2491 & sidechain teal target a
    70573 
    70574 > color #6.*/v medium aquamarine
    70575 
    70576 > color #14.*/v medium aquamarine
    70577 
    70578 > color #25.*/v medium aquamarine
    70579 
    70580 > color #6.1/a:2491 & sidechain teal target a
    70581 
    70582 > color #6.2/a:2491 & sidechain teal target a
    70583 
    70584 > color #6.7/a:2491 & sidechain teal target a
    70585 
    70586 > color #14.3/a:2491 & sidechain teal target a
    70587 
    70588 > color #14.9/a:2491 & sidechain teal target a
    70589 
    70590 > color #25.5/a:2491 & sidechain medium orchid target a
    70591 
    70592 > color #25.7/a:2491 & sidechain medium orchid target a
    70593 
    70594 > show #!1.16 models
    70595 
    70596 > save /Users/dalar193/Desktop/H89_U2491/H89-5MDZ.png width 580 height 800
    70597 > supersample 4
    70598 
    70599 > hide #!1.16 models
    70600 
    70601 > show #!6.10 models
    70602 
    70603 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class0.png width 580 height
    70604 > 800 supersample 4
    70605 
    70606 > hide #!6.10 models
    70607 
    70608 > show #!6.1 models
    70609 
    70610 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class1.png width 580 height
    70611 > 800 supersample 4
    70612 
    70613 > hide #!6.1 models
    70614 
    70615 > show #!6.2 models
    70616 
    70617 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class2.png width 580 height
    70618 > 800 supersample 4
    70619 
    70620 > hide #!6.2 models
    70621 
    70622 > show #!6.3 models
    70623 
    70624 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class3.png width 580 height
    70625 > 800 supersample 4
    70626 
    70627 > hide #!6.3 models
    70628 
    70629 > show #!6.4 models
    70630 
    70631 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class4.png width 580 height
    70632 > 800 supersample 4
    70633 
    70634 > hide #!6.4 models
    70635 
    70636 > show #!6.5 models
    70637 
    70638 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class5.png width 580 height
    70639 > 800 supersample 4
    70640 
    70641 > hide #!6.5 models
    70642 
    70643 > show #!6.6 models
    70644 
    70645 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class6.png width 580 height
    70646 > 800 supersample 4
    70647 
    70648 > hide #!6.6 models
    70649 
    70650 > show #!6.7 models
    70651 
    70652 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class7.png width 580 height
    70653 > 800 supersample 4
    70654 
    70655 > hide #!6.7 models
    70656 
    70657 > show #!6.8 models
    70658 
    70659 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class8.png width 580 height
    70660 > 800 supersample 4
    70661 
    70662 > hide #!6.8 models
    70663 
    70664 > show #!6.9 models
    70665 
    70666 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class9.png width 580 height
    70667 > 800 supersample 4
    70668 
    70669 > hide #!6.9 models
    70670 
    70671 > show #!6.1 models
    70672 
    70673 > hide #!6.1 models
    70674 
    70675 > show #!6.1 models
    70676 
    70677 > hide #!6.1 models
    70678 
    70679 > view H89
    70680 
    70681 > show #!1.16 models
    70682 
    70683 > save /Users/dalar193/Desktop/H89_U2491/H89-5MDZ.png width 580 height 800
    70684 > supersample 4
    70685 
    70686 > hide #!1.16 models
    70687 
    70688 > show #!6.10 models
    70689 
    70690 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class0.png width 580 height
    70691 > 800 supersample 4
    70692 
    70693 > hide #!6.10 models
    70694 
    70695 > show #!6.1 models
    70696 
    70697 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class1.png width 580 height
    70698 > 800 supersample 4
    70699 
    70700 > hide #!6.1 models
    70701 
    70702 > show #!6.2 models
    70703 
    70704 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class2.png width 580 height
    70705 > 800 supersample 4
    70706 
    70707 > hide #!6.2 models
    70708 
    70709 > show #!6.3 models
    70710 
    70711 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class3.png width 580 height
    70712 > 800 supersample 4
    70713 
    70714 > hide #!6.3 models
    70715 
    70716 > show #!6.4 models
    70717 
    70718 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class4.png width 580 height
    70719 > 800 supersample 4
    70720 
    70721 > hide #!6.4 models
    70722 
    70723 > show #!6.5 models
    70724 
    70725 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class5.png width 580 height
    70726 > 800 supersample 4
    70727 
    70728 > hide #!6.5 models
    70729 
    70730 > show #!6.6 models
    70731 
    70732 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class6.png width 580 height
    70733 > 800 supersample 4
    70734 
    70735 > hide #!6.6 models
    70736 
    70737 > show #!6.7 models
    70738 
    70739 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class7.png width 580 height
    70740 > 800 supersample 4
    70741 
    70742 > hide #!6.7 models
    70743 
    70744 > show #!6.8 models
    70745 
    70746 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class8.png width 580 height
    70747 > 800 supersample 4
    70748 
    70749 > hide #!6.8 models
    70750 
    70751 > show #!6.9 models
    70752 
    70753 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class9.png width 580 height
    70754 > 800 supersample 4
    70755 
    70756 > hide #!6.9 models
    70757 
    70758 > show #!14.10 models
    70759 
    70760 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class0.png width 580 height
    70761 > 800 supersample 4
    70762 
    70763 > hide #!14.10 models
    70764 
    70765 > show #!14.1 models
    70766 
    70767 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class1.png width 580 height
    70768 > 800 supersample 4
    70769 
    70770 > hide #!14.1 models
    70771 
    70772 > show #!14.2 models
    70773 
    70774 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class2.png width 580 height
    70775 > 800 supersample 4
    70776 
    70777 > hide #!14.2 models
    70778 
    70779 > show #!14.3 models
    70780 
    70781 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class3.png width 580 height
    70782 > 800 supersample 4
    70783 
    70784 > hide #!14.3 models
    70785 
    70786 > show #!14.4 models
    70787 
    70788 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class4.png width 580 height
    70789 > 800 supersample 4
    70790 
    70791 > hide #!14.4 models
    70792 
    70793 > show #!14.5 models
    70794 
    70795 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class5.png width 580 height
    70796 > 800 supersample 4
    70797 
    70798 > hide #!14.5 models
    70799 
    70800 > show #!14.6 models
    70801 
    70802 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class6.png width 580 height
    70803 > 800 supersample 4
    70804 
    70805 > hide #!14.6 models
    70806 
    70807 > show #!14.7 models
    70808 
    70809 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class7.png width 580 height
    70810 > 800 supersample 4
    70811 
    70812 > hide #!14.7 models
    70813 
    70814 > show #!14.8 models
    70815 
    70816 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class8.png width 580 height
    70817 > 800 supersample 4
    70818 
    70819 > hide #!14.8 models
    70820 
    70821 > show #!14.9 models
    70822 
    70823 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class9.png width 580 height
    70824 > 800 supersample 4
    70825 
    70826 > hide #!14.9 models
    70827 
    70828 > show #!25.10 models
    70829 
    70830 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class0.png width 580 height
    70831 > 800 supersample 4
    70832 
    70833 > hide #!25.10 models
    70834 
    70835 > show #!25.1 models
    70836 
    70837 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class1.png width 580 height
    70838 > 800 supersample 4
    70839 
    70840 > hide #!25.1 models
    70841 
    70842 > show #!25.2 models
    70843 
    70844 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class2.png width 580 height
    70845 > 800 supersample 4
    70846 
    70847 > hide #!25.2 models
    70848 
    70849 > show #!25.3 models
    70850 
    70851 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class3.png width 580 height
    70852 > 800 supersample 4
    70853 
    70854 > hide #!25.3 models
    70855 
    70856 > show #!25.4 models
    70857 
    70858 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class4.png width 580 height
    70859 > 800 supersample 4
    70860 
    70861 > hide #!25.4 models
    70862 
    70863 > show #!25.5 models
    70864 
    70865 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class5.png width 580 height
    70866 > 800 supersample 4
    70867 
    70868 > hide #!25.5 models
    70869 
    70870 > show #!25.6 models
    70871 
    70872 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class6.png width 580 height
    70873 > 800 supersample 4
    70874 
    70875 > hide #!25.6 models
    70876 
    70877 > show #!25.7 models
    70878 
    70879 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class7.png width 580 height
    70880 > 800 supersample 4
    70881 
    70882 > hide #!25.7 models
    70883 
    70884 > show #!25.8 models
    70885 
    70886 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class8.png width 580 height
    70887 > 800 supersample 4
    70888 
    70889 > hide #!25.8 models
    70890 
    70891 > show #!25.9 models
    70892 
    70893 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class9.png width 580 height
    70894 > 800 supersample 4
    70895 
    70896 > hide #!25.9 models
    70897 
    70898 > transparency #1.2 0 target c
    70899 
    70900 > show #!6.1 models
    70901 
    70902 > hide #!6.1 models
    70903 
    70904 > show #!6.1 models
    70905 
    70906 > view H89
    70907 
    70908 > color #6.1/a:2491,2494 & sidechain teal target a
    70909 
    70910 > color #6.2/a:2491,2494 & sidechain teal target a
    70911 
    70912 > color #6.7/a:2491,2494 & sidechain teal target a
    70913 
    70914 > color #14.3/a:2491,2494 & sidechain teal target a
    70915 
    70916 > color #14.9/a:2491,2494 & sidechain teal target a
    70917 
    70918 > color #25.5/a:2491,2494 & sidechain medium orchid target a
    70919 
    70920 > color #25.7/a:2491,2494 & sidechain medium orchid target a
    70921 
    70922 > color #6.1/a:2494 teal target a
    70923 
    70924 > color #6.2/a:2494 teal target a
    70925 
    70926 > color #6.7/a:2494 teal target a
    70927 
    70928 > color #14.3/a:2494 teal target a
    70929 
    70930 > color #14.9/a:2494 teal target a
    70931 
    70932 > color #25.5/a:2494 medium orchid target a
    70933 
    70934 > color #25.7/a:2494 medium orchid target a
    70935 
    70936 > color #6.1/a:2494#6.1/a:2493@O3' teal target a
    70937 
    70938 > color #6.1/a:2494 #6.1/a:2493@O3' teal target a
    70939 
    70940 > color #6.2/a:2494 #6.2/a:2493@O3' teal target a
    70941 
    70942 > color #6.7/a:2494 #6.7/a:2493@O3' teal target a
    70943 
    70944 > color #14.3/a:2494 #14.3/a:2493@O3' teal target a
    70945 
    70946 > color #14.9/a:2494 #14.9/a:2493@O3' teal target a
    70947 
    70948 > color #25.5/a:2494 #25.5/a:2493@O3' medium orchid target a
    70949 
    70950 > color #25.7/a:2494 #25.7/a:2493@O3' medium orchid target a
    70951 
    70952 > show #!6.2 models
    70953 
    70954 > hide #!6.1 models
    70955 
    70956 > show #!6.1 models
    70957 
    70958 > hide #!6.2 models
    70959 
    70960 > show #!6.2 models
    70961 
    70962 > hide #!6.2 models
    70963 
    70964 > hide #!6 models
    70965 
    70966 > show #!6.2 models
    70967 
    70968 > hide #!6.1 models
    70969 
    70970 > hide #!1.2 models
    70971 
    70972 > color #6.1/a:2494 #6.1/a:2493@O3' teal target a
    70973 
    70974 > color #6.2/a:2494 #6.2/a:2493@O3' teal target a
    70975 
    70976 > color #6.7/a:2494 #6.7/a:2493@O3' teal target a
    70977 
    70978 > color #14.3/a:2494 #14.3/a:2493@O3' teal target a
    70979 
    70980 > color #14.9/a:2494 #14.9/a:2493@O3' teal target a
    70981 
    70982 > color #25.5/a:2494 #25.5/a:2493@O3' medium orchid target a
    70983 
    70984 > color #25.7/a:2494 #25.7/a:2493@O3' medium orchid target a
    70985 
    70986 > color #6.1/a:2495@O3' light gray target a
    70987 
    70988 > color #6.2/a:2495@O3' light gray target a
    70989 
    70990 > color #6.7/a:2495@O3' light gray target a
    70991 
    70992 > color #14.3/a:2495@O3' light gray target a
    70993 
    70994 > color #14.9/a:2495@O3' light gray target a
    70995 
    70996 > color #25.5/a:2495@O3' light gray target a
    70997 
    70998 > color #25.7/a:2495@O3' light gray target a
    70999 
    71000 > hide #!6.2 models
    71001 
    71002 > show #!6.2 models
    71003 
    71004 > color #6.1/a:2494@O3' light gray target a
    71005 
    71006 > color #6.2/a:2494@O3' light gray target a
    71007 
    71008 > color #6.7/a:2494@O3' light gray target a
    71009 
    71010 > color #14.3/a:2494@O3' light gray target a
    71011 
    71012 > color #14.9/a:2494@O3' light gray target a
    71013 
    71014 > color #25.5/a:2494@O3' light gray target a
    71015 
    71016 > color #25.7/a:2494@O3' light gray target a
    71017 
    71018 > show #!6.1 models
    71019 
    71020 > hide #!6.2 models
    71021 
    71022 > show #!6.3 models
    71023 
    71024 > hide #!6.1 models
    71025 
    71026 > show #!6.4 models
    71027 
    71028 > hide #!6.3 models
    71029 
    71030 > show #!6.5 models
    71031 
    71032 > hide #!6.4 models
    71033 
    71034 > show #!6.6 models
    71035 
    71036 > hide #!6.5 models
    71037 
    71038 > show #!6.7 models
    71039 
    71040 > hide #!6.6 models
    71041 
    71042 > color #6.*/a:2491 & sidechain medium orchid target a
    71043 
    71044 > color #14.*/a:2491 & sidechain medium orchid target a
    71045 
    71046 > color #25.*/a:2491 & sidechain teal target a
    71047 
    71048 > color #6.*/a:2494 #6.*/a:2493@O3' & sidechain medium orchid target a
    71049 
    71050 > color #14.*/a:2494 #14.*/a:2493@O3' & sidechain medium orchid target a
    71051 
    71052 > color #25.*/a:2494 #25.*/a:2493@O3' & sidechain teal target a
    71053 
    71054 > color #6.*/a:2494@O3' & sidechain light gray target a
    71055 
    71056 > color #14.*/a:2494@O3' & sidechain light gray target a
    71057 
    71058 > color #25.*/a:2494@O3' & sidechain light gray target a
    71059 
    71060 > color #6.1/a:2491 & sidechain teal target a
    71061 
    71062 > color #6.2/a:2491 & sidechain teal target a
    71063 
    71064 > color #6.7/a:2491 & sidechain teal target a
    71065 
    71066 > color #14.3/a:2491 & sidechain teal target a
    71067 
    71068 > color #14.9/a:2491 & sidechain teal target a
    71069 
    71070 > color #25.5/a:2491 & sidechain medium orchid target a
    71071 
    71072 > color #25.7/a:2491 & sidechain medium orchid target a
    71073 
    71074 > color #6.1/a:2494 #6.1/a:2493@O3' teal target a
    71075 
    71076 > color #6.2/a:2494 #6.2/a:2493@O3' teal target a
    71077 
    71078 > color #6.7/a:2494 #6.7/a:2493@O3' teal target a
    71079 
    71080 > color #14.3/a:2494 #14.3/a:2493@O3' teal target a
    71081 
    71082 > color #14.9/a:2494 #14.9/a:2493@O3' teal target a
    71083 
    71084 > color #25.5/a:2494 #25.5/a:2493@O3' medium orchid target a
    71085 
    71086 > color #25.7/a:2494 #25.7/a:2493@O3' medium orchid target a
    71087 
    71088 > color #6.1/a:2494@O3' light gray target a
    71089 
    71090 > color #6.2/a:2494@O3' light gray target a
    71091 
    71092 > color #6.7/a:2494@O3' light gray target a
    71093 
    71094 > color #14.3/a:2494@O3' light gray target a
    71095 
    71096 > color #14.9/a:2494@O3' light gray target a
    71097 
    71098 > color #25.5/a:2494@O3' light gray target a
    71099 
    71100 > color #25.7/a:2494@O3' light gray target a
    71101 
    71102 > view H89
    71103 
    71104 > hide #1.2
    71105 
    71106 > ~cartoon #1.2
    71107 
    71108 > cartoon #1.2/a:2449-2463,2487-2501
    71109 
    71110 > show #1.2/a:2491,2457,2498,2451,2449-2463,2487-2501
    71111 
    71112 > color #1.2 dark slate gray
    71113 
    71114 > color #1.2/a:2491 & sidechain teal target a
    71115 
    71116 > color #1.2/a:2494 #1.2/a:2493@O3' teal target a
    71117 
    71118 > color #1.2/a:2494@O3' dark slate blue target a
    71119 
    71120 > color #1.2/a:2457,2498,2501,2449 & sidechain orange target a
    71121 
    71122 > color #1.2/a:2451 & sidechain green yellow target a
    71123 
    71124 > show #1.2/a:2518 & sidechain
    71125 
    71126 > show #1.2/v:1-5
    71127 
    71128 > color #1.2/v medium aquamarine
    71129 
    71130 > hide #1.2/a:MG,HOH
    71131 
    71132 > show #1.2/a:6231,8885
    71133 
    71134 > color #1.2/a:MG tomato
    71135 
    71136 > color #1.2/a:HOH royal blue
    71137 
    71138 > color #1.2 dark orange target p
    71139 
    71140 > pbond #1.2/a:2452@OP1 #1.2/a:6231 color dark orange
    71141 
    71142 > pbond #1.2/a:6231 #1.2/a:8885 color dark orange
    71143 
    71144 > pbond #1.2/a:8885 #1.2/a:2493@OP1 color dark orange
    71145 
    71146 > pbond #1.2/a:8885 #1.2/a:2494@OP2 color dark orange
    71147 
    71148 > transparency #1.2 0 target c
    71149 
    71150 > hide #!6.7 models
    71151 
    71152 > show #!1.2 models
    71153 
    71154 > color #1.2/a:2491 & sidechain teal target a
    71155 
    71156 > color #1.2/a:2494 #1.2/a:2493@O3' teal target a
    71157 
    71158 > color #1.2/a:2494@O3' dark slate gray target a
    71159 
    71160 > show #!1.2 models
    71161 
    71162 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM.png width 580 height 800
    71163 > supersample 4
    71164 
    71165 > hide #!1.2 models
    71166 
    71167 > hide #1.2
    71168 
    71169 > transparency #1.2 80 target c
    71170 
    71171 > show #!1.16 models
    71172 
    71173 > save /Users/dalar193/Desktop/H89_U2491/H89-5MDZ.png width 580 height 800
    71174 > supersample 4
    71175 
    71176 > hide #!1.16 models
    71177 
    71178 > show #!6.10 models
    71179 
    71180 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class0.png width 580 height
    71181 > 800 supersample 4
    71182 
    71183 > hide #!6.10 models
    71184 
    71185 > show #!6.1 models
    71186 
    71187 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class1.png width 580 height
    71188 > 800 supersample 4
    71189 
    71190 > hide #!6.1 models
    71191 
    71192 > show #!6.2 models
    71193 
    71194 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class2.png width 580 height
    71195 > 800 supersample 4
    71196 
    71197 > hide #!6.2 models
    71198 
    71199 > show #!6.3 models
    71200 
    71201 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class3.png width 580 height
    71202 > 800 supersample 4
    71203 
    71204 > hide #!6.3 models
    71205 
    71206 > show #!6.4 models
    71207 
    71208 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class4.png width 580 height
    71209 > 800 supersample 4
    71210 
    71211 > hide #!6.4 models
    71212 
    71213 > show #!6.5 models
    71214 
    71215 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class5.png width 580 height
    71216 > 800 supersample 4
    71217 
    71218 > hide #!6.5 models
    71219 
    71220 > show #!6.6 models
    71221 
    71222 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class6.png width 580 height
    71223 > 800 supersample 4
    71224 
    71225 > hide #!6.6 models
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    71227 > show #!6.7 models
    71228 
    71229 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class7.png width 580 height
    71230 > 800 supersample 4
    71231 
    71232 > hide #!6.7 models
    71233 
    71234 > show #!6.8 models
    71235 
    71236 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class8.png width 580 height
    71237 > 800 supersample 4
    71238 
    71239 > hide #!6.8 models
    71240 
    71241 > show #!6.9 models
    71242 
    71243 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class9.png width 580 height
    71244 > 800 supersample 4
    71245 
    71246 > hide #!6.9 models
    71247 
    71248 > show #!14.10 models
    71249 
    71250 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class0.png width 580 height
    71251 > 800 supersample 4
    71252 
    71253 > hide #!14.10 models
    71254 
    71255 > show #!14.1 models
    71256 
    71257 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class1.png width 580 height
    71258 > 800 supersample 4
    71259 
    71260 > hide #!14.1 models
    71261 
    71262 > show #!14.2 models
    71263 
    71264 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class2.png width 580 height
    71265 > 800 supersample 4
    71266 
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    71268 
    71269 > show #!14.3 models
    71270 
    71271 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class3.png width 580 height
    71272 > 800 supersample 4
    71273 
    71274 > hide #!14.3 models
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    71276 > show #!14.4 models
    71277 
    71278 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class4.png width 580 height
    71279 > 800 supersample 4
    71280 
    71281 > hide #!14.4 models
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    71283 > show #!14.5 models
    71284 
    71285 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class5.png width 580 height
    71286 > 800 supersample 4
    71287 
    71288 > hide #!14.5 models
    71289 
    71290 > show #!14.6 models
    71291 
    71292 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class6.png width 580 height
    71293 > 800 supersample 4
    71294 
    71295 > hide #!14.6 models
    71296 
    71297 > show #!14.7 models
    71298 
    71299 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class7.png width 580 height
    71300 > 800 supersample 4
    71301 
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    71303 
    71304 > show #!14.8 models
    71305 
    71306 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class8.png width 580 height
    71307 > 800 supersample 4
    71308 
    71309 > hide #!14.8 models
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    71311 > show #!14.9 models
    71312 
    71313 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class9.png width 580 height
    71314 > 800 supersample 4
    71315 
    71316 > hide #!14.9 models
    71317 
    71318 > show #!25.10 models
    71319 
    71320 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class0.png width 580 height
    71321 > 800 supersample 4
    71322 
    71323 > hide #!25.10 models
    71324 
    71325 > show #!25.1 models
    71326 
    71327 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class1.png width 580 height
    71328 > 800 supersample 4
    71329 
    71330 > hide #!25.1 models
    71331 
    71332 > show #!25.2 models
    71333 
    71334 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class2.png width 580 height
    71335 > 800 supersample 4
    71336 
    71337 > hide #!25.2 models
    71338 
    71339 > show #!25.3 models
    71340 
    71341 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class3.png width 580 height
    71342 > 800 supersample 4
    71343 
    71344 > hide #!25.3 models
    71345 
    71346 > show #!25.4 models
    71347 
    71348 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class4.png width 580 height
    71349 > 800 supersample 4
    71350 
    71351 > hide #!25.4 models
    71352 
    71353 > show #!25.5 models
    71354 
    71355 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class5.png width 580 height
    71356 > 800 supersample 4
    71357 
    71358 > hide #!25.5 models
    71359 
    71360 > show #!25.6 models
    71361 
    71362 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class6.png width 580 height
    71363 > 800 supersample 4
    71364 
    71365 > hide #!25.6 models
    71366 
    71367 > show #!25.7 models
    71368 
    71369 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class7.png width 580 height
    71370 > 800 supersample 4
    71371 
    71372 > hide #!25.7 models
    71373 
    71374 > show #!25.8 models
    71375 
    71376 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class8.png width 580 height
    71377 > 800 supersample 4
    71378 
    71379 > hide #!25.8 models
    71380 
    71381 > show #!25.9 models
    71382 
    71383 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class9.png width 580 height
    71384 > 800 supersample 4
    71385 
    71386 > hide #!25.9 models
    71387 
    71388 > transparency #1.2 0 target c
    71389 
    71390 > color #1.16/1:2491 & sidechain magenta target a
    71391 
    71392 > color #1.16/a:2494 #1.16/a:2493@O3' magenta target a
    71393 
    71394 > color #1.16/a:2494@O3' purple target a
    71395 
    71396 > show #!1.16 models
    71397 
    71398 > color #1.16/1:2491 & sidechain magenta target a
    71399 
    71400 > color #1.16/a:2494 #1.16/a:2493@O3' magenta target a
    71401 
    71402 > color #1.16/a:2494#1.16/a:2493@O3' magenta target a
    71403 
    71404 > color #1.16/1:2494 #1.16/1:2493@O3' magenta target a
    71405 
    71406 > color #1.16/1:2491 & sidechain magenta target a
    71407 
    71408 > color #1.16/1:2494 #1.16/a:2493@O3' magenta target a
    71409 
    71410 > color #1.16/1:2494@O3' purple target a
    71411 
    71412 > transparency #1.2 80 target c
    71413 
    71414 > hide #1.2
    71415 
    71416 > show #!1.16 models
    71417 
    71418 > save /Users/dalar193/Desktop/H89_U2491/H89-5MDZ.png width 580 height 800
    71419 > supersample 4
    71420 
    71421 > hide #!1.16 models
    71422 
    71423 > transparency #1.2 80 target c
    71424 
    71425 > hide #1.2
    71426 
    71427 > show #!1.16 models
    71428 
    71429 > save /Users/dalar193/Desktop/H89_U2491/H89-5MDZ.png width 580 height 800
    71430 > supersample 4
    71431 
    71432 > hide #!1.16 models
    71433 
    71434 > show #!1.2 models
    71435 
    71436 > show #!1.16 models
    71437 
    71438 > save /Users/dalar193/Desktop/H89_U2491/H89-5MDZ.png width 580 height 800
    71439 > supersample 4
    71440 
    71441 > hide #!1.16 models
    71442 
    71443 > show #!6.1 models
    71444 
    71445 > hide #!6.1 models
    71446 
    71447 > show #!6.10 models
    71448 
    71449 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class0.png width 580 height
    71450 > 800 supersample 4
    71451 
    71452 > hide #!6.10 models
    71453 
    71454 > show #!6.1 models
    71455 
    71456 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class1.png width 580 height
    71457 > 800 supersample 4
    71458 
    71459 > hide #!6.1 models
    71460 
    71461 > show #!6.2 models
    71462 
    71463 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class2.png width 580 height
    71464 > 800 supersample 4
    71465 
    71466 > hide #!6.2 models
    71467 
    71468 > show #!6.3 models
    71469 
    71470 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class3.png width 580 height
    71471 > 800 supersample 4
    71472 
    71473 > hide #!6.3 models
    71474 
    71475 > show #!6.4 models
    71476 
    71477 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class4.png width 580 height
    71478 > 800 supersample 4
    71479 
    71480 > hide #!6.4 models
    71481 
    71482 > show #!6.5 models
    71483 
    71484 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class5.png width 580 height
    71485 > 800 supersample 4
    71486 
    71487 > hide #!6.5 models
    71488 
    71489 > show #!6.6 models
    71490 
    71491 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class6.png width 580 height
    71492 > 800 supersample 4
    71493 
    71494 > hide #!6.6 models
    71495 
    71496 > show #!6.7 models
    71497 
    71498 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class7.png width 580 height
    71499 > 800 supersample 4
    71500 
    71501 > hide #!6.7 models
    71502 
    71503 > show #!6.8 models
    71504 
    71505 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class8.png width 580 height
    71506 > 800 supersample 4
    71507 
    71508 > hide #!6.8 models
    71509 
    71510 > show #!6.9 models
    71511 
    71512 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class9.png width 580 height
    71513 > 800 supersample 4
    71514 
    71515 > hide #!6.9 models
    71516 
    71517 > show #!14.10 models
    71518 
    71519 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class0.png width 580 height
    71520 > 800 supersample 4
    71521 
    71522 > hide #!14.10 models
    71523 
    71524 > show #!14.1 models
    71525 
    71526 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class1.png width 580 height
    71527 > 800 supersample 4
    71528 
    71529 > hide #!14.1 models
    71530 
    71531 > show #!14.2 models
    71532 
    71533 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class2.png width 580 height
    71534 > 800 supersample 4
    71535 
    71536 > hide #!14.2 models
    71537 
    71538 > show #!14.3 models
    71539 
    71540 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class3.png width 580 height
    71541 > 800 supersample 4
    71542 
    71543 > hide #!14.3 models
    71544 
    71545 > show #!14.4 models
    71546 
    71547 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class4.png width 580 height
    71548 > 800 supersample 4
    71549 
    71550 > hide #!14.4 models
    71551 
    71552 > show #!14.5 models
    71553 
    71554 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class5.png width 580 height
    71555 > 800 supersample 4
    71556 
    71557 > hide #!14.5 models
    71558 
    71559 > show #!14.6 models
    71560 
    71561 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class6.png width 580 height
    71562 > 800 supersample 4
    71563 
    71564 > hide #!14.6 models
    71565 
    71566 > show #!14.7 models
    71567 
    71568 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class7.png width 580 height
    71569 > 800 supersample 4
    71570 
    71571 > hide #!14.7 models
    71572 
    71573 > show #!14.8 models
    71574 
    71575 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class8.png width 580 height
    71576 > 800 supersample 4
    71577 
    71578 > hide #!14.8 models
    71579 
    71580 > show #!14.9 models
    71581 
    71582 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class9.png width 580 height
    71583 > 800 supersample 4
    71584 
    71585 > hide #!14.9 models
    71586 
    71587 > show #!25.10 models
    71588 
    71589 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class0.png width 580 height
    71590 > 800 supersample 4
    71591 
    71592 > hide #!25.10 models
    71593 
    71594 > show #!25.1 models
    71595 
    71596 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class1.png width 580 height
    71597 > 800 supersample 4
    71598 
    71599 > hide #!25.1 models
    71600 
    71601 > show #!25.2 models
    71602 
    71603 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class2.png width 580 height
    71604 > 800 supersample 4
    71605 
    71606 > hide #!25.2 models
    71607 
    71608 > show #!25.3 models
    71609 
    71610 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class3.png width 580 height
    71611 > 800 supersample 4
    71612 
    71613 > hide #!25.3 models
    71614 
    71615 > show #!25.4 models
    71616 
    71617 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class4.png width 580 height
    71618 > 800 supersample 4
    71619 
    71620 > hide #!25.4 models
    71621 
    71622 > show #!25.5 models
    71623 
    71624 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class5.png width 580 height
    71625 > 800 supersample 4
    71626 
    71627 > hide #!25.5 models
    71628 
    71629 > show #!25.6 models
    71630 
    71631 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class6.png width 580 height
    71632 > 800 supersample 4
    71633 
    71634 > hide #!25.6 models
    71635 
    71636 > show #!25.7 models
    71637 
    71638 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class7.png width 580 height
    71639 > 800 supersample 4
    71640 
    71641 > hide #!25.7 models
    71642 
    71643 > show #!25.8 models
    71644 
    71645 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class8.png width 580 height
    71646 > 800 supersample 4
    71647 
    71648 > hide #!25.8 models
    71649 
    71650 > show #!25.9 models
    71651 
    71652 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class9.png width 580 height
    71653 > 800 supersample 4
    71654 
    71655 > hide #!25.9 models
    71656 
    71657 > transparency #1.2 0 target c
    71658 
    71659 > color #6.*/a:2491 & sidechain medium orchid target a
    71660 
    71661 > color #14.*/a:2491 & sidechain medium orchid target a
    71662 
    71663 > color #25.*/a:2491 & sidechain teal target a
    71664 
    71665 > color #6.*/a:2494 #6.*/a:2493@O3' & sidechain medium orchid target a
    71666 
    71667 > color #14.*/a:2494 #14.*/a:2493@O3' & sidechain medium orchid target a
    71668 
    71669 > color #25.*/a:2494 #25.*/a:2493@O3' & sidechain teal target a
    71670 
    71671 > color #6.*/a:2494@O3' & sidechain light gray target a
    71672 
    71673 > color #14.*/a:2494@O3' & sidechain light gray target a
    71674 
    71675 > color #25.*/a:2494@O3' & sidechain light gray target a
    71676 
    71677 > color #6.1/a:2491 & sidechain teal target a
    71678 
    71679 > color #6.2/a:2491 & sidechain teal target a
    71680 
    71681 > color #6.7/a:2491 & sidechain teal target a
    71682 
    71683 > color #14.3/a:2491 & sidechain teal target a
    71684 
    71685 > color #14.9/a:2491 & sidechain teal target a
    71686 
    71687 > color #25.5/a:2491 & sidechain medium orchid target a
    71688 
    71689 > color #25.7/a:2491 & sidechain medium orchid target a
    71690 
    71691 > color #6.1/a:2494 #6.1/a:2493@O3' teal target a
    71692 
    71693 > color #6.2/a:2494 #6.2/a:2493@O3' teal target a
    71694 
    71695 > color #6.7/a:2494 #6.7/a:2493@O3' teal target a
    71696 
    71697 > color #14.3/a:2494 #14.3/a:2493@O3' teal target a
    71698 
    71699 > color #14.9/a:2494 #14.9/a:2493@O3' teal target a
    71700 
    71701 > color #25.5/a:2494 #25.5/a:2493@O3' medium orchid target a
    71702 
    71703 > color #25.7/a:2494 #25.7/a:2493@O3' medium orchid target a
    71704 
    71705 > color #6.1/a:2494@O3' light gray target a
    71706 
    71707 > color #6.2/a:2494@O3' light gray target a
    71708 
    71709 > color #6.7/a:2494@O3' light gray target a
    71710 
    71711 > color #14.3/a:2494@O3' light gray target a
    71712 
    71713 > color #14.9/a:2494@O3' light gray target a
    71714 
    71715 > color #25.5/a:2494@O3' light gray target a
    71716 
    71717 > color #25.7/a:2494@O3' light gray target a
    71718 
    71719 > transparency #1.2 80 target c
    71720 
    71721 > hide #1.2
    71722 
    71723 > show #!1.2 models
    71724 
    71725 > show #!1.16 models
    71726 
    71727 > save /Users/dalar193/Desktop/H89_U2491/H89-5MDZ.png width 580 height 800
    71728 > supersample 4
    71729 
    71730 > hide #!1.16 models
    71731 
    71732 > show #!6.10 models
    71733 
    71734 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class0.png width 580 height
    71735 > 800 supersample 4
    71736 
    71737 > hide #!6.10 models
    71738 
    71739 > show #!6.1 models
    71740 
    71741 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class1.png width 580 height
    71742 > 800 supersample 4
    71743 
    71744 > hide #!6.1 models
    71745 
    71746 > show #!6.2 models
    71747 
    71748 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class2.png width 580 height
    71749 > 800 supersample 4
    71750 
    71751 > hide #!6.2 models
    71752 
    71753 > show #!6.3 models
    71754 
    71755 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class3.png width 580 height
    71756 > 800 supersample 4
    71757 
    71758 > hide #!6.3 models
    71759 
    71760 > show #!6.4 models
    71761 
    71762 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class4.png width 580 height
    71763 > 800 supersample 4
    71764 
    71765 > hide #!6.4 models
    71766 
    71767 > show #!6.5 models
    71768 
    71769 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class5.png width 580 height
    71770 > 800 supersample 4
    71771 
    71772 > hide #!6.5 models
    71773 
    71774 > show #!6.6 models
    71775 
    71776 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class6.png width 580 height
    71777 > 800 supersample 4
    71778 
    71779 > hide #!6.6 models
    71780 
    71781 > show #!6.7 models
    71782 
    71783 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class7.png width 580 height
    71784 > 800 supersample 4
    71785 
    71786 > hide #!6.7 models
    71787 
    71788 > show #!6.8 models
    71789 
    71790 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class8.png width 580 height
    71791 > 800 supersample 4
    71792 
    71793 > hide #!6.8 models
    71794 
    71795 > show #!6.9 models
    71796 
    71797 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class9.png width 580 height
    71798 > 800 supersample 4
    71799 
    71800 > hide #!6.9 models
    71801 
    71802 > show #!14.10 models
    71803 
    71804 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class0.png width 580 height
    71805 > 800 supersample 4
    71806 
    71807 > hide #!14.10 models
    71808 
    71809 > show #!14.1 models
    71810 
    71811 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class1.png width 580 height
    71812 > 800 supersample 4
    71813 
    71814 > hide #!14.1 models
    71815 
    71816 > show #!14.2 models
    71817 
    71818 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class2.png width 580 height
    71819 > 800 supersample 4
    71820 
    71821 > hide #!14.2 models
    71822 
    71823 > show #!14.3 models
    71824 
    71825 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class3.png width 580 height
    71826 > 800 supersample 4
    71827 
    71828 > hide #!14.3 models
    71829 
    71830 > show #!14.4 models
    71831 
    71832 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class4.png width 580 height
    71833 > 800 supersample 4
    71834 
    71835 > hide #!14.4 models
    71836 
    71837 > show #!14.5 models
    71838 
    71839 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class5.png width 580 height
    71840 > 800 supersample 4
    71841 
    71842 > hide #!14.5 models
    71843 
    71844 > show #!14.6 models
    71845 
    71846 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class6.png width 580 height
    71847 > 800 supersample 4
    71848 
    71849 > hide #!14.6 models
    71850 
    71851 > show #!14.7 models
    71852 
    71853 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class7.png width 580 height
    71854 > 800 supersample 4
    71855 
    71856 > hide #!14.7 models
    71857 
    71858 > show #!14.8 models
    71859 
    71860 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class8.png width 580 height
    71861 > 800 supersample 4
    71862 
    71863 > hide #!14.8 models
    71864 
    71865 > show #!14.9 models
    71866 
    71867 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class9.png width 580 height
    71868 > 800 supersample 4
    71869 
    71870 > hide #!14.9 models
    71871 
    71872 > show #!25.10 models
    71873 
    71874 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class0.png width 580 height
    71875 > 800 supersample 4
    71876 
    71877 > hide #!25.10 models
    71878 
    71879 > show #!25.1 models
    71880 
    71881 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class1.png width 580 height
    71882 > 800 supersample 4
    71883 
    71884 > hide #!25.1 models
    71885 
    71886 > show #!25.2 models
    71887 
    71888 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class2.png width 580 height
    71889 > 800 supersample 4
    71890 
    71891 > hide #!25.2 models
    71892 
    71893 > show #!25.3 models
    71894 
    71895 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class3.png width 580 height
    71896 > 800 supersample 4
    71897 
    71898 > hide #!25.3 models
    71899 
    71900 > show #!25.4 models
    71901 
    71902 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class4.png width 580 height
    71903 > 800 supersample 4
    71904 
    71905 > hide #!25.4 models
    71906 
    71907 > show #!25.5 models
    71908 
    71909 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class5.png width 580 height
    71910 > 800 supersample 4
    71911 
    71912 > hide #!25.5 models
    71913 
    71914 > show #!25.6 models
    71915 
    71916 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class6.png width 580 height
    71917 > 800 supersample 4
    71918 
    71919 > hide #!25.6 models
    71920 
    71921 > show #!25.7 models
    71922 
    71923 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class7.png width 580 height
    71924 > 800 supersample 4
    71925 
    71926 > hide #!25.7 models
    71927 
    71928 > show #!25.8 models
    71929 
    71930 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class8.png width 580 height
    71931 > 800 supersample 4
    71932 
    71933 > hide #!25.8 models
    71934 
    71935 > show #!25.9 models
    71936 
    71937 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class9.png width 580 height
    71938 > 800 supersample 4
    71939 
    71940 > hide #!25.9 models
    71941 
    71942 > transparency #1.2 0 target c
    71943 
    71944 > show #!1.16 models
    71945 
    71946 > hide #!1.2 models
    71947 
    71948 > show #1.16/I:76-83
    71949 
    71950 > ~show #1.16/I:76-83
    71951 
    71952 > show #1.16/I:76-83
    71953 
    71954 > show #1.16/l:76-83
    71955 
    71956 > ~show #1.16/l:76-83
    71957 
    71958 [Repeated 1 time(s)]
    71959 
    71960 > ~show #1.16/I:76-83
    71961 
    71962 > show #1.16/M:76-83
    71963 
    71964 [Repeated 1 time(s)]
    71965 
    71966 > color #1.16/M darkred violette
    71967 
    71968 Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
    71969 'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword 
    71970 
    71971 > show #1.16/M:76-83
    71972 
    71973 > color #1.16/M dark violet
    71974 
    71975 > show #1.16/M:76-83
    71976 
    71977 > color #1.16/M darkred violett
    71978 
    71979 Expected a collection of one of 'All', 'atoms', 'bonds', 'cartoons', 'labels',
    71980 'models', 'pseudobonds', 'ribbons', 'rings', or 'surfaces' or a keyword 
    71981 
    71982 > show #1.16/M:76-83
    71983 
    71984 > color #1.16/M dark violet
    71985 
    71986 > show #1.16/M:76-83
    71987 
    71988 > color #1.16/M violet
    71989 
    71990 > show #1.16/M:76-83
    71991 
    71992 > color #1.16/M dark violet
    71993 
    71994 > hide #!1.16 models
    71995 
    71996 > show #!1.2 models
    71997 
    71998 > show #1.2/a:2491,2457,2498,2451,2449-2463,2487-2501
    71999 
    72000 > show #1.2/a:2518 & sidechain
    72001 
    72002 > show #1.2/v:1-5
    72003 
    72004 > show #1.2/l:76-83
    72005 
    72006 > color #1.2/l dark violet
    72007 
    72008 > hide #!1.2 models
    72009 
    72010 > show #!1.2 models
    72011 
    72012 > hide #!1.2 models
    72013 
    72014 > show #!5.3 models
    72015 
    72016 > hide #!5.3 models
    72017 
    72018 > show #!6.3 models
    72019 
    72020 > hide #1.2
    72021 
    72022 > ~cartoon #1.2
    72023 
    72024 > cartoon #1.2/a:2449-2463,2487-2501
    72025 
    72026 > show #1.2/a:2491,2457,2498,2451,2449-2463,2487-2501
    72027 
    72028 > show #1.2/a:2518 & sidechain
    72029 
    72030 > show #1.2/v:1-5
    72031 
    72032 > hide #1.16
    72033 
    72034 > ~cartoon #1.16
    72035 
    72036 > cartoon #1.16/a:2449-2463,2487-2501
    72037 
    72038 > show #1.16/a:2491,2457,2498,2451,2449-2463,2487-2501
    72039 
    72040 > show #1.16/a:2518 & sidechain
    72041 
    72042 > show #1.16/v:1-5
    72043 
    72044 > show #1.16/M:76-83
    72045 
    72046 > color #1.16/M dark violet
    72047 
    72048 > show #1.2/l:76-83
    72049 
    72050 > color #1.2/l dark violet
    72051 
    72052 > hide #6.*
    72053 
    72054 > ~cartoon #6.*
    72055 
    72056 > cartoon #6.*/a:2449-2463,2487-2501
    72057 
    72058 > show #6.*/a:2491,2457,2498,2451,2449-2463,2487-2501
    72059 
    72060 > show #6.*/a:2518 & sidechain
    72061 
    72062 > show #6.*/v:1-5
    72063 
    72064 > hide #14.*
    72065 
    72066 > ~cartoon #14.*
    72067 
    72068 > cartoon #14.*/a:2449-2463,2487-2501
    72069 
    72070 > show #14.*/a:2491,2457,2498,2451,2449-2463,2487-2501
    72071 
    72072 > show #14.*/a:2518 & sidechain
    72073 
    72074 > show #14.*/v:1-5
    72075 
    72076 > hide #25.*
    72077 
    72078 > ~cartoon #25.*
    72079 
    72080 > cartoon #25.*/a:2449-2463,2487-2501
    72081 
    72082 > show #25.*/a:2491,2457,2498,2451,2449-2463,2487-2501
    72083 
    72084 > show #25.*/a:2518 & sidechain
    72085 
    72086 > show #25.*/v:1-5
    72087 
    72088 > color #6.*#14.*#25.* light gray
    72089 
    72090 > color #6.*#14.*#25.* yellow target p
    72091 
    72092 > color #6.*/v medium aquamarine
    72093 
    72094 > color #14.*/v medium aquamarine
    72095 
    72096 > color #25.*/v medium aquamarine
    72097 
    72098 > color #6.*/a:2457,2498,2501,2449 & sidechain orange target a
    72099 
    72100 > color #14.*/a:2457,2498,2501,2449 & sidechain orange target a
    72101 
    72102 > color #25.*/a:2457,2498,2501,2449 & sidechain orange target a
    72103 
    72104 > color #6.*/a:2451 & sidechain green yellow target a
    72105 
    72106 > color #14.*/a:2451 & sidechain green yellow target a
    72107 
    72108 > color #25.*/a:2451 & sidechain green yellow target a
    72109 
    72110 > color #6.*/a:2491 & sidechain medium orchid target a
    72111 
    72112 > color #14.*/a:2491 & sidechain medium orchid target a
    72113 
    72114 > color #25.*/a:2491 & sidechain teal target a
    72115 
    72116 > color #6.*/a:2494 #6.*/a:2493@O3' & sidechain medium orchid target a
    72117 
    72118 > color #14.*/a:2494 #14.*/a:2493@O3' & sidechain medium orchid target a
    72119 
    72120 > color #25.*/a:2494 #25.*/a:2493@O3' & sidechain teal target a
    72121 
    72122 > color #6.*/a:2494@O3' & sidechain light gray target a
    72123 
    72124 > color #14.*/a:2494@O3' & sidechain light gray target a
    72125 
    72126 > color #25.*/a:2494@O3' & sidechain light gray target a
    72127 
    72128 > color #6.1/a:2491 & sidechain teal target a
    72129 
    72130 > color #6.2/a:2491 & sidechain teal target a
    72131 
    72132 > color #6.7/a:2491 & sidechain teal target a
    72133 
    72134 > color #14.3/a:2491 & sidechain teal target a
    72135 
    72136 > color #14.9/a:2491 & sidechain teal target a
    72137 
    72138 > color #25.5/a:2491 & sidechain medium orchid target a
    72139 
    72140 > color #25.7/a:2491 & sidechain medium orchid target a
    72141 
    72142 > color #6.1/a:2494 #6.1/a:2493@O3' teal target a
    72143 
    72144 > color #6.2/a:2494 #6.2/a:2493@O3' teal target a
    72145 
    72146 > color #6.7/a:2494 #6.7/a:2493@O3' teal target a
    72147 
    72148 > color #14.3/a:2494 #14.3/a:2493@O3' teal target a
    72149 
    72150 > color #14.9/a:2494 #14.9/a:2493@O3' teal target a
    72151 
    72152 > color #25.5/a:2494 #25.5/a:2493@O3' medium orchid target a
    72153 
    72154 > color #25.7/a:2494 #25.7/a:2493@O3' medium orchid target a
    72155 
    72156 > color #6.1/a:2494@O3' light gray target a
    72157 
    72158 > color #6.2/a:2494@O3' light gray target a
    72159 
    72160 > color #6.7/a:2494@O3' light gray target a
    72161 
    72162 > color #14.3/a:2494@O3' light gray target a
    72163 
    72164 > color #14.9/a:2494@O3' light gray target a
    72165 
    72166 > color #25.5/a:2494@O3' light gray target a
    72167 
    72168 > color #25.7/a:2494@O3' light gray target a
    72169 
    72170 > hide #!6.3 models
    72171 
    72172 > show #!6.3 models
    72173 
    72174 > color #6.*/a:2491 & sidechain medium orchid target a
    72175 
    72176 > color #14.*/a:2491 & sidechain medium orchid target a
    72177 
    72178 > color #25.*/a:2491 & sidechain teal target a
    72179 
    72180 > color #6.*/a:2494#6.*/a:2493@O3' & sidechain medium orchid target a
    72181 
    72182 > color #14.*/a:2494#14.*/a:2493@O3' & sidechain medium orchid target a
    72183 
    72184 > color #25.*/a:2494#25.*/a:2493@O3' & sidechain teal target a
    72185 
    72186 > color #6.*/a:2494@O3' & sidechain light gray target a
    72187 
    72188 > color #14.*/a:2494@O3' & sidechain light gray target a
    72189 
    72190 > color #25.*/a:2494@O3' & sidechain light gray target a
    72191 
    72192 > color #6.*/a:2494#6.*/a:2493@O3' & sidechain medium orchid target a
    72193 
    72194 > color #6.*/a:2494 & sidechain medium orchid target a
    72195 
    72196 > color #6.*/a:2494 medium orchid target a
    72197 
    72198 > color #6.*/a:2491 & sidechain medium orchid target a
    72199 
    72200 > color #14.*/a:2491 & sidechain medium orchid target a
    72201 
    72202 > color #25.*/a:2491 & sidechain teal target a
    72203 
    72204 > color #6.*/a:2494#6.*/a:2493@O3' medium orchid target a
    72205 
    72206 > color #14.*/a:2494#14.*/a:2493@O3' medium orchid target a
    72207 
    72208 > color #25.*/a:2494#25.*/a:2493@O3' teal target a
    72209 
    72210 > color #6.*/a:2494@O3' light gray target a
    72211 
    72212 > color #14.*/a:2494@O3' light gray target a
    72213 
    72214 > color #25.*/a:2494@O3' light gray target a
    72215 
    72216 > hide #!6.3 models
    72217 
    72218 > show #!6.1 models
    72219 
    72220 > hide #!6.1 models
    72221 
    72222 > show #!6.2 models
    72223 
    72224 > hide #!6.2 models
    72225 
    72226 > show #!6.3 models
    72227 
    72228 > hide #!6.3 models
    72229 
    72230 > show #!6.4 models
    72231 
    72232 > hide #!6.4 models
    72233 
    72234 > show #!6.5 models
    72235 
    72236 > hide #!6.5 models
    72237 
    72238 > show #!6.6 models
    72239 
    72240 > hide #!6.6 models
    72241 
    72242 > show #!6.7 models
    72243 
    72244 > hide #!6.7 models
    72245 
    72246 > show #!6.7 models
    72247 
    72248 > hide #!6.7 models
    72249 
    72250 > show #!6.8 models
    72251 
    72252 > hide #!6.8 models
    72253 
    72254 > show #!6.9 models
    72255 
    72256 > hide #!6.9 models
    72257 
    72258 > show #!6.8 models
    72259 
    72260 > hide #!6.8 models
    72261 
    72262 > show #!6.9 models
    72263 
    72264 > hide #!6.9 models
    72265 
    72266 > show #!6.10 models
    72267 
    72268 > hide #!6.10 models
    72269 
    72270 > show #!14.1 models
    72271 
    72272 > hide #!14.1 models
    72273 
    72274 > show #!14.3 models
    72275 
    72276 > hide #!14.3 models
    72277 
    72278 > show #!14.2 models
    72279 
    72280 > hide #!14.2 models
    72281 
    72282 > show #!14.2 models
    72283 
    72284 > hide #!14.2 models
    72285 
    72286 > show #!14.3 models
    72287 
    72288 > hide #!14.3 models
    72289 
    72290 > show #!14.3 models
    72291 
    72292 > hide #!14.3 models
    72293 
    72294 > show #!14.4 models
    72295 
    72296 > hide #!14.4 models
    72297 
    72298 > show #!14.3 models
    72299 
    72300 > distance #14.3/a:2494@OP1 #14.3/v:3@N
    72301 
    72302 Distance between d10_J56_c3 #14.3/a G 2494 OP1 and /v HIS 3 N: 3.101Å 
    72303 
    72304 > close #14.3.3
    72305 
    72306 > hide #!14.3 models
    72307 
    72308 > show #!14.3 models
    72309 
    72310 > ~distance #14.3/a:2494@OP1 #14.3/v:3@N
    72311 
    72312 > hbonds #14.3/a:2491/v:1-3 interModel false restrict #14.3& #14.3/a:2491,2494
    72313 > :< 4 color yellow
    72314 
    72315 3 hydrogen bonds found 
    72316 
    72317 > hide #14.3.3 models
    72318 
    72319 > show #14.3.3 models
    72320 
    72321 > show #14.3 target p
    72322 
    72323 > ~show #14.3 target p
    72324 
    72325 > hide #14.3
    72326 
    72327 > hide #14.*
    72328 
    72329 > ~cartoon #14.*
    72330 
    72331 > cartoon #14.*/a:2449-2463,2487-2501
    72332 
    72333 > show #14.*/a:2491,2457,2498,2451,2449-2463,2487-2501
    72334 
    72335 > show #14.*/a:2518 & sidechain
    72336 
    72337 > show #14.*/v:1-5
    72338 
    72339 > show #!14.2 models
    72340 
    72341 > select add #14.2
    72342 
    72343 9343 atoms, 10209 bonds, 28 pseudobonds, 607 residues, 4 models selected 
    72344 
    72345 > select subtract #14.2
    72346 
    72347 Nothing selected 
    72348 
    72349 > hide #!14.2 models
    72350 
    72351 > show #!14.1 models
    72352 
    72353 > hide #!14.1 models
    72354 
    72355 > show #!14.4 models
    72356 
    72357 > hide #!14.4 models
    72358 
    72359 > show #!14.5 models
    72360 
    72361 > hide #!14.5 models
    72362 
    72363 > show #!14.6 models
    72364 
    72365 > hide #!14.6 models
    72366 
    72367 > show #!14.7 models
    72368 
    72369 > hide #!14.7 models
    72370 
    72371 > show #!14.8 models
    72372 
    72373 > hide #!14.8 models
    72374 
    72375 > show #!14.9 models
    72376 
    72377 > hide #!14.9 models
    72378 
    72379 > show #!14.10 models
    72380 
    72381 > hide #!14.10 models
    72382 
    72383 > show #!14.1 models
    72384 
    72385 > hide #!14.1 models
    72386 
    72387 > show #!14.2 models
    72388 
    72389 > hide #!14.2 models
    72390 
    72391 > hide #!14.3 models
    72392 
    72393 > show #!14.3 models
    72394 
    72395 > show #!14.10 models
    72396 
    72397 > hide #!14.10 models
    72398 
    72399 > show #!14.9 models
    72400 
    72401 > hide #!14.9 models
    72402 
    72403 > show #!14.9 models
    72404 
    72405 > hide #!14.9 models
    72406 
    72407 > show #!14.9 models
    72408 
    72409 > hide #!14.9 models
    72410 
    72411 > show #!14.9 models
    72412 
    72413 > hide #!14.9 models
    72414 
    72415 > show #!14.9 models
    72416 
    72417 > hide #!14.9 models
    72418 
    72419 > color #6.1/a:2491 & sidechain teal target a
    72420 
    72421 > color #6.2/a:2491 & sidechain teal target a
    72422 
    72423 > color #6.7/a:2491 & sidechain teal target a
    72424 
    72425 > color #14.3/a:2491 & sidechain teal target a
    72426 
    72427 > color #14.9/a:2491 & sidechain teal target a
    72428 
    72429 > color #25.5/a:2491 & sidechain medium orchid target a
    72430 
    72431 > color #25.7/a:2491 & sidechain medium orchid target a
    72432 
    72433 > color #6.1/a:2494 #6.1/a:2493@O3' teal target a
    72434 
    72435 > color #6.2/a:2494 #6.2/a:2493@O3' teal target a
    72436 
    72437 > color #6.7/a:2494 #6.7/a:2493@O3' teal target a
    72438 
    72439 > color #14.3/a:2494 #14.3/a:2493@O3' teal target a
    72440 
    72441 > color #14.9/a:2494 #14.9/a:2493@O3' teal target a
    72442 
    72443 > color #25.5/a:2494 #25.5/a:2493@O3' medium orchid target a
    72444 
    72445 > color #25.7/a:2494 #25.7/a:2493@O3' medium orchid target a
    72446 
    72447 > color #6.1/a:2494@O3' light gray target a
    72448 
    72449 > color #6.2/a:2494@O3' light gray target a
    72450 
    72451 > color #6.7/a:2494@O3' light gray target a
    72452 
    72453 > color #14.3/a:2494@O3' light gray target a
    72454 
    72455 > color #14.9/a:2494@O3' light gray target a
    72456 
    72457 > color #25.5/a:2494@O3' light gray target a
    72458 
    72459 > color #25.7/a:2494@O3' light gray target a
    72460 
    72461 > view H89
    72462 
    72463 > show #!6.2 models
    72464 
    72465 > hide #!6.2 models
    72466 
    72467 > show #!6.2 models
    72468 
    72469 > hide #!6.2 models
    72470 
    72471 > show #!6.2 models
    72472 
    72473 > hide #!6.2 models
    72474 
    72475 > show #!6.2 models
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    72477 > hide #!6.2 models
    72478 
    72479 > show #!6.3 models
    72480 
    72481 > hide #!6.3 models
    72482 
    72483 > show #!6.3 models
    72484 
    72485 > hide #!6.3 models
    72486 
    72487 > show #!6.4 models
    72488 
    72489 > hide #!6.4 models
    72490 
    72491 > show #!6.4 models
    72492 
    72493 > hide #!6.4 models
    72494 
    72495 > show #!6.1 models
    72496 
    72497 > hide #!6.1 models
    72498 
    72499 > show #!6.1 models
    72500 
    72501 > show #!6.2 models
    72502 
    72503 > hide #!6.1 models
    72504 
    72505 > show #!6.1 models
    72506 
    72507 > hide #!6.1 models
    72508 
    72509 > show #!1.2 models
    72510 
    72511 > hide #!1.2 models
    72512 
    72513 > show #!1.2 models
    72514 
    72515 > hide #!1.2 models
    72516 
    72517 > show #!1.2 models
    72518 
    72519 > hide #!1.2 models
    72520 
    72521 > show #!1.2 models
    72522 
    72523 > hide #!1.2 models
    72524 
    72525 > show #!1.2 models
    72526 
    72527 > ui mousemode right "tape measure"
    72528 
    72529 > marker segment #8 position 130.9,181.6,137 toPosition 131.8,180.9,134.1
    72530 > color yellow radius 0.1 label 3.068 labelHeight 0.3068 labelColor yellow
    72531 
    72532 > marker segment #8 position 130.2,181.8,137.1 toPosition 130.8,180.7,134.4
    72533 > color yellow radius 0.1 label 2.943 labelHeight 0.2943 labelColor yellow
    72534 
    72535 > marker segment #8 position 129.9,181.8,136.8 toPosition 130.9,180.1,134.4
    72536 > color yellow radius 0.1 label 3.101 labelHeight 0.3101 labelColor yellow
    72537 
    72538 > close #8
    72539 
    72540 > view H89
    72541 
    72542 > color #1.2#1.16#6.*#14.*#25.* yellow target p
    72543 
    72544 > view H89
    72545 
    72546 > ~show #1.16/M:76-83
    72547 
    72548 > color #1.16/M dark violet
    72549 
    72550 > ~show #1.2/l:76-83
    72551 
    72552 > color #1.2/l dark violet
    72553 
    72554 > view H89
    72555 
    72556 > hide #!1.2 models
    72557 
    72558 > hide #!1.16 models
    72559 
    72560 > hide #!6.10 models
    72561 
    72562 > hide #!6.1 models
    72563 
    72564 > hide #!6.2 models
    72565 
    72566 > hide #!6.3 models
    72567 
    72568 > hide #!6.4 models
    72569 
    72570 > hide #!6.5 models
    72571 
    72572 > hide #!6.6 models
    72573 
    72574 > hide #!6.7 models
    72575 
    72576 > hide #!6.8 models
    72577 
    72578 > hide #!6.9 models
    72579 
    72580 > view H89
    72581 
    72582 > show #!1.2 models
    72583 
    72584 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM.png width 580 height 800
    72585 > supersample 4
    72586 
    72587 > hide #!1.2 models
    72588 
    72589 > transparency #1.2 80 target c
    72590 
    72591 > hide #1.2
    72592 
    72593 > show #!1.2 models
    72594 
    72595 > show #!1.16 models
    72596 
    72597 > save /Users/dalar193/Desktop/H89_U2491/H89-5MDZ.png width 580 height 800
    72598 > supersample 4
    72599 
    72600 > hide #!1.16 models
    72601 
    72602 > show #!6.10 models
    72603 
    72604 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class0.png width 580 height
    72605 > 800 supersample 4
    72606 
    72607 > hide #!6.10 models
    72608 
    72609 > show #!6.1 models
    72610 
    72611 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class1.png width 580 height
    72612 > 800 supersample 4
    72613 
    72614 > hide #!6.1 models
    72615 
    72616 > show #!6.2 models
    72617 
    72618 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class2.png width 580 height
    72619 > 800 supersample 4
    72620 
    72621 > hide #!6.2 models
    72622 
    72623 > show #!6.3 models
    72624 
    72625 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class3.png width 580 height
    72626 > 800 supersample 4
    72627 
    72628 > hide #!6.3 models
    72629 
    72630 > show #!6.4 models
    72631 
    72632 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class4.png width 580 height
    72633 > 800 supersample 4
    72634 
    72635 > hide #!6.4 models
    72636 
    72637 > show #!6.5 models
    72638 
    72639 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class5.png width 580 height
    72640 > 800 supersample 4
    72641 
    72642 > hide #!6.5 models
    72643 
    72644 > show #!6.6 models
    72645 
    72646 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class6.png width 580 height
    72647 > 800 supersample 4
    72648 
    72649 > hide #!6.6 models
    72650 
    72651 > show #!6.7 models
    72652 
    72653 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class7.png width 580 height
    72654 > 800 supersample 4
    72655 
    72656 > hide #!6.7 models
    72657 
    72658 > show #!6.8 models
    72659 
    72660 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class8.png width 580 height
    72661 > 800 supersample 4
    72662 
    72663 > hide #!6.8 models
    72664 
    72665 > show #!6.9 models
    72666 
    72667 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class9.png width 580 height
    72668 > 800 supersample 4
    72669 
    72670 > hide #!6.9 models
    72671 
    72672 > show #!14.10 models
    72673 
    72674 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class0.png width 580 height
    72675 > 800 supersample 4
    72676 
    72677 > hide #!14.10 models
    72678 
    72679 > show #!14.1 models
    72680 
    72681 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class1.png width 580 height
    72682 > 800 supersample 4
    72683 
    72684 > hide #!14.1 models
    72685 
    72686 > show #!14.2 models
    72687 
    72688 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class2.png width 580 height
    72689 > 800 supersample 4
    72690 
    72691 > hide #!14.2 models
    72692 
    72693 > show #!14.3 models
    72694 
    72695 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class3.png width 580 height
    72696 > 800 supersample 4
    72697 
    72698 > hide #!14.3 models
    72699 
    72700 > show #!14.4 models
    72701 
    72702 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class4.png width 580 height
    72703 > 800 supersample 4
    72704 
    72705 > hide #!14.4 models
    72706 
    72707 > show #!14.5 models
    72708 
    72709 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class5.png width 580 height
    72710 > 800 supersample 4
    72711 
    72712 > hide #!14.5 models
    72713 
    72714 > show #!14.6 models
    72715 
    72716 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class6.png width 580 height
    72717 > 800 supersample 4
    72718 
    72719 > hide #!14.6 models
    72720 
    72721 > show #!14.7 models
    72722 
    72723 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class7.png width 580 height
    72724 > 800 supersample 4
    72725 
    72726 > hide #!14.7 models
    72727 
    72728 > show #!14.8 models
    72729 
    72730 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class8.png width 580 height
    72731 > 800 supersample 4
    72732 
    72733 > hide #!14.8 models
    72734 
    72735 > show #!14.9 models
    72736 
    72737 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class9.png width 580 height
    72738 > 800 supersample 4
    72739 
    72740 > hide #!14.9 models
    72741 
    72742 > show #!25.10 models
    72743 
    72744 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class0.png width 580 height
    72745 > 800 supersample 4
    72746 
    72747 > hide #!25.10 models
    72748 
    72749 > show #!25.1 models
    72750 
    72751 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class1.png width 580 height
    72752 > 800 supersample 4
    72753 
    72754 > hide #!25.1 models
    72755 
    72756 > show #!25.2 models
    72757 
    72758 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class2.png width 580 height
    72759 > 800 supersample 4
    72760 
    72761 > hide #!25.2 models
    72762 
    72763 > show #!25.3 models
    72764 
    72765 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class3.png width 580 height
    72766 > 800 supersample 4
    72767 
    72768 > hide #!25.3 models
    72769 
    72770 > show #!25.4 models
    72771 
    72772 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class4.png width 580 height
    72773 > 800 supersample 4
    72774 
    72775 > hide #!25.4 models
    72776 
    72777 > show #!25.5 models
    72778 
    72779 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class5.png width 580 height
    72780 > 800 supersample 4
    72781 
    72782 > hide #!25.5 models
    72783 
    72784 > show #!25.6 models
    72785 
    72786 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class6.png width 580 height
    72787 > 800 supersample 4
    72788 
    72789 > hide #!25.6 models
    72790 
    72791 > show #!25.7 models
    72792 
    72793 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class7.png width 580 height
    72794 > 800 supersample 4
    72795 
    72796 > hide #!25.7 models
    72797 
    72798 > show #!25.8 models
    72799 
    72800 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class8.png width 580 height
    72801 > 800 supersample 4
    72802 
    72803 > hide #!25.8 models
    72804 
    72805 > show #!25.9 models
    72806 
    72807 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class9.png width 580 height
    72808 > 800 supersample 4
    72809 
    72810 > hide #!25.9 models
    72811 
    72812 > transparency #1.2 0 target c
    72813 
    72814 > show #1.2/a:2491,2457,2498,2451,2449-2463,2487-2501
    72815 
    72816 > show #1.2/a:2518 & sidechain
    72817 
    72818 > show #1.2/v:1-5
    72819 
    72820 > hide #!1.2 models
    72821 
    72822 > hide #!1.16 models
    72823 
    72824 > hide #!6.* models
    72825 
    72826 > hide #!14.* models
    72827 
    72828 > hide #!25.* models
    72829 
    72830 > view H89
    72831 
    72832 > show #!1.2 models
    72833 
    72834 > save /Users/dalar193/Desktop/H89_U2491/H89-8EMM.png width 580 height 800
    72835 > supersample 4
    72836 
    72837 > hide #!1.2 models
    72838 
    72839 > transparency #1.2 80 target c
    72840 
    72841 > hide #1.2
    72842 
    72843 > show #!1.2 models
    72844 
    72845 > show #!1.16 models
    72846 
    72847 > save /Users/dalar193/Desktop/H89_U2491/H89-5MDZ.png width 580 height 800
    72848 > supersample 4
    72849 
    72850 > hide #!1.16 models
    72851 
    72852 > show #!6.10 models
    72853 
    72854 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class0.png width 580 height
    72855 > 800 supersample 4
    72856 
    72857 > hide #!6.10 models
    72858 
    72859 > show #!6.1 models
    72860 
    72861 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class1.png width 580 height
    72862 > 800 supersample 4
    72863 
    72864 > hide #!6.1 models
    72865 
    72866 > show #!6.2 models
    72867 
    72868 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class2.png width 580 height
    72869 > 800 supersample 4
    72870 
    72871 > hide #!6.2 models
    72872 
    72873 > show #!6.3 models
    72874 
    72875 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class3.png width 580 height
    72876 > 800 supersample 4
    72877 
    72878 > hide #!6.3 models
    72879 
    72880 > show #!6.4 models
    72881 
    72882 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class4.png width 580 height
    72883 > 800 supersample 4
    72884 
    72885 > hide #!6.4 models
    72886 
    72887 > show #!6.5 models
    72888 
    72889 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class5.png width 580 height
    72890 > 800 supersample 4
    72891 
    72892 > hide #!6.5 models
    72893 
    72894 > show #!6.6 models
    72895 
    72896 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class6.png width 580 height
    72897 > 800 supersample 4
    72898 
    72899 > hide #!6.6 models
    72900 
    72901 > show #!6.7 models
    72902 
    72903 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class7.png width 580 height
    72904 > 800 supersample 4
    72905 
    72906 > hide #!6.7 models
    72907 
    72908 > show #!6.8 models
    72909 
    72910 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class8.png width 580 height
    72911 > 800 supersample 4
    72912 
    72913 > hide #!6.8 models
    72914 
    72915 > show #!6.9 models
    72916 
    72917 > save /Users/dalar193/Desktop/H89_U2491/H89-del9-class9.png width 580 height
    72918 > 800 supersample 4
    72919 
    72920 > hide #!6.9 models
    72921 
    72922 > show #!14.10 models
    72923 
    72924 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class0.png width 580 height
    72925 > 800 supersample 4
    72926 
    72927 > hide #!14.10 models
    72928 
    72929 > show #!14.1 models
    72930 
    72931 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class1.png width 580 height
    72932 > 800 supersample 4
    72933 
    72934 > hide #!14.1 models
    72935 
    72936 > show #!14.2 models
    72937 
    72938 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class2.png width 580 height
    72939 > 800 supersample 4
    72940 
    72941 > hide #!14.2 models
    72942 
    72943 > show #!14.3 models
    72944 
    72945 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class3.png width 580 height
    72946 > 800 supersample 4
    72947 
    72948 > hide #!14.3 models
    72949 
    72950 > show #!14.4 models
    72951 
    72952 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class4.png width 580 height
    72953 > 800 supersample 4
    72954 
    72955 > hide #!14.4 models
    72956 
    72957 > show #!14.5 models
    72958 
    72959 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class5.png width 580 height
    72960 > 800 supersample 4
    72961 
    72962 > hide #!14.5 models
    72963 
    72964 > show #!14.6 models
    72965 
    72966 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class6.png width 580 height
    72967 > 800 supersample 4
    72968 
    72969 > hide #!14.6 models
    72970 
    72971 > show #!14.7 models
    72972 
    72973 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class7.png width 580 height
    72974 > 800 supersample 4
    72975 
    72976 > hide #!14.7 models
    72977 
    72978 > show #!14.8 models
    72979 
    72980 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class8.png width 580 height
    72981 > 800 supersample 4
    72982 
    72983 > hide #!14.8 models
    72984 
    72985 > show #!14.9 models
    72986 
    72987 > save /Users/dalar193/Desktop/H89_U2491/H89-del10-class9.png width 580 height
    72988 > 800 supersample 4
    72989 
    72990 > hide #!14.9 models
    72991 
    72992 > show #!25.10 models
    72993 
    72994 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class0.png width 580 height
    72995 > 800 supersample 4
    72996 
    72997 > hide #!25.10 models
    72998 
    72999 > show #!25.1 models
    73000 
    73001 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class1.png width 580 height
    73002 > 800 supersample 4
    73003 
    73004 > hide #!25.1 models
    73005 
    73006 > show #!25.2 models
    73007 
    73008 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class2.png width 580 height
    73009 > 800 supersample 4
    73010 
    73011 > hide #!25.2 models
    73012 
    73013 > show #!25.3 models
    73014 
    73015 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class3.png width 580 height
    73016 > 800 supersample 4
    73017 
    73018 > hide #!25.3 models
    73019 
    73020 > show #!25.4 models
    73021 
    73022 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class4.png width 580 height
    73023 > 800 supersample 4
    73024 
    73025 > hide #!25.4 models
    73026 
    73027 > show #!25.5 models
    73028 
    73029 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class5.png width 580 height
    73030 > 800 supersample 4
    73031 
    73032 > hide #!25.5 models
    73033 
    73034 > show #!25.6 models
    73035 
    73036 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class6.png width 580 height
    73037 > 800 supersample 4
    73038 
    73039 > hide #!25.6 models
    73040 
    73041 > show #!25.7 models
    73042 
    73043 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class7.png width 580 height
    73044 > 800 supersample 4
    73045 
    73046 > hide #!25.7 models
    73047 
    73048 > show #!25.8 models
    73049 
    73050 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class8.png width 580 height
    73051 > 800 supersample 4
    73052 
    73053 > hide #!25.8 models
    73054 
    73055 > show #!25.9 models
    73056 
    73057 > save /Users/dalar193/Desktop/H89_U2491/H89-delE-class9.png width 580 height
    73058 > 800 supersample 4
    73059 
    73060 > hide #!25.9 models
    73061 
    73062 > transparency #1.2 0 target c
    73063 
    73064 > show #1.2/a:2491,2457,2498,2451,2449-2463,2487-2501
    73065 
    73066 > show #1.2/a:2518 & sidechain
    73067 
    73068 > show #1.2/v:1-5
    73069 
    73070 > show #1.2/a:6231,8885
    73071 
    73072 > hide #!1.2 models
    73073 
    73074 > show #!1.16 models
    73075 
    73076 > cartoon #1.16/a:2449-2463,2487-2501
    73077 
    73078 > show #1.16/a:2491,2457,2498,2451,2449-2463,2487-2501
    73079 
    73080 > show #1.16/a:2518 & sidechain
    73081 
    73082 > show #1.16/v:1-5
    73083 
    73084 > cartoon #1.16/1:2449-2463,2487-2501
    73085 
    73086 > show #1.16/1:2491,2457,2498,2451,2449-2463,2487-2501
    73087 
    73088 > show #1.16/1:2518 & sidechain
    73089 
    73090 > show #1.16/W:1-5
    73091 
    73092 > show #1.16/1:3289
    73093 
    73094 > color #1.16/1:MG tomato
    73095 
    73096 > transparency #1.2 80 target c
    73097 
    73098 > hide #1.2
    73099 
    73100 > show #!1.2 models
    73101 
    73102 > show #!1.16 models
    73103 
    73104 > save /Users/dalar193/Desktop/H89_U2491/H89-5MDZ.png width 580 height 800
    73105 > supersample 4
    73106 
    73107 > hide #!1.16 models
    73108 
    73109 > color #6.*/v medium aquamarine
    73110 
    73111 > color #14.*/v medium aquamarine
    73112 
    73113 > color #25.*/v medium aquamarine
    73114 
    73115 > color #6.*/a:2457,2498,2501,2449 & sidechain orange target a
    73116 
    73117 > color #14.*/a:2457,2498,2501,2449 & sidechain orange target a
    73118 
    73119 > color #25.*/a:2457,2498,2501,2449 & sidechain orange target a
    73120 
    73121 > color #6.*/a:2451 & sidechain green yellow target a
    73122 
    73123 > color #14.*/a:2451 & sidechain green yellow target a
    73124 
    73125 > color #25.*/a:2451 & sidechain green yellow target a
    73126 
    73127 > color #6.*/a:2491 & sidechain medium orchid target a
    73128 
    73129 > color #14.*/a:2491 & sidechain medium orchid target a
    73130 
    73131 > color #25.*/a:2491 & sidechain teal target a
    73132 
    73133 > color #6.*/a:2494#6.*/a:2493@O3' medium orchid target a
    73134 
    73135 > color #14.*/a:2494#14.*/a:2493@O3' medium orchid target a
    73136 
    73137 > color #25.*/a:2494#25.*/a:2493@O3' teal target a
    73138 
    73139 > color #6.*/a:2494@O3' light gray target a
    73140 
    73141 > color #14.*/a:2494@O3' light gray target a
    73142 
    73143 > color #25.*/a:2494@O3' light gray target a
    73144 
    73145 > color #6.1/a:2491 & sidechain teal target a
    73146 
    73147 > color #6.2/a:2491 & sidechain teal target a
    73148 
    73149 > color #6.7/a:2491 & sidechain teal target a
    73150 
    73151 > color #14.3/a:2491 & sidechain teal target a
    73152 
    73153 > color #14.9/a:2491 & sidechain teal target a
    73154 
    73155 > color #25.5/a:2491 & sidechain medium orchid target a
    73156 
    73157 > color #25.7/a:2491 & sidechain medium orchid target a
    73158 
    73159 > color #6.1/a:2494 #6.1/a:2493@O3' teal target a
    73160 
    73161 > color #6.2/a:2494 #6.2/a:2493@O3' teal target a
    73162 
    73163 > color #6.7/a:2494 #6.7/a:2493@O3' teal target a
    73164 
    73165 > color #14.3/a:2494 #14.3/a:2493@O3' teal target a
    73166 
    73167 > color #14.9/a:2494 #14.9/a:2493@O3' teal target a
    73168 
    73169 > color #25.5/a:2494 #25.5/a:2493@O3' medium orchid target a
    73170 
    73171 > color #25.7/a:2494 #25.7/a:2493@O3' medium orchid target a
    73172 
    73173 > color #6.1/a:2494@O3' light gray target a
    73174 
    73175 > color #6.2/a:2494@O3' light gray target a
    73176 
    73177 > color #6.7/a:2494@O3' light gray target a
    73178 
    73179 > color #14.3/a:2494@O3' light gray target a
    73180 
    73181 > color #14.9/a:2494@O3' light gray target a
    73182 
    73183 > color #25.5/a:2494@O3' light gray target a
    73184 
    73185 > color #25.7/a:2494@O3' light gray target a
    73186 
    73187 > show #!1.16 models
    73188 
    73189 > color #1.16/1:2491 & sidechain medium orchid target a
    73190 
    73191 > color #1.16/a:2494#1.16/a:2493@O3' medium orchid target a
    73192 
    73193 > color #6.*#14.*#25.* light gray
    73194 
    73195 > color #1.2#1.16#6.*#14.*#25.* yellow target p
    73196 
    73197 > color #6.*/v medium aquamarine
    73198 
    73199 > color #14.*/v medium aquamarine
    73200 
    73201 > color #25.*/v medium aquamarine
    73202 
    73203 > color #6.*/a:2457,2498,2501,2449 & sidechain orange target a
    73204 
    73205 > color #14.*/a:2457,2498,2501,2449 & sidechain orange target a
    73206 
    73207 > color #25.*/a:2457,2498,2501,2449 & sidechain orange target a
    73208 
    73209 > color #6.*/a:2451 & sidechain green yellow target a
    73210 
    73211 > color #14.*/a:2451 & sidechain green yellow target a
    73212 
    73213 > color #25.*/a:2451 & sidechain green yellow target a
    73214 
    73215 > color #1.16/1:2491 & sidechain magenta target a
    73216 
    73217 > color #1.16/a:2494#1.16/a:2493@O3' magenta target a
    73218 
    73219 > color #6.*/a:2491 & sidechain magenta target a
    73220 
    73221 > color #14.*/a:2491 & sidechain magenta target a
    73222 
    73223 > color #25.*/a:2491 & sidechain teal target a
    73224 
    73225 > color #6.*/a:2494#6.*/a:2493@O3' magenta target a
    73226 
    73227 > color #14.*/a:2494#14.*/a:2493@O3' magenta target a
    73228 
    73229 > color #25.*/a:2494#25.*/a:2493@O3' teal target a
    73230 
    73231 > color #6.*/a:2494@O3' light gray target a
    73232 
    73233 > color #14.*/a:2494@O3' light gray target a
    73234 
    73235 > color #25.*/a:2494@O3' light gray target a
    73236 
    73237 > color #6.1/a:2491 & sidechain teal target a
    73238 
    73239 > color #6.2/a:2491 & sidechain teal target a
    73240 
    73241 > color #6.7/a:2491 & sidechain teal target a
    73242 
    73243 > color #14.3/a:2491 & sidechain teal target a
    73244 
    73245 > color #14.9/a:2491 & sidechain teal target a
    73246 
    73247 > color #25.5/a:2491 & sidechain magenta target a
    73248 
    73249 > color #25.7/a:2491 & sidechain magenta target a
    73250 
    73251 > color #6.1/a:2494 #6.1/a:2493@O3' teal target a
    73252 
    73253 > color #6.2/a:2494 #6.2/a:2493@O3' teal target a
    73254 
    73255 > color #6.7/a:2494 #6.7/a:2493@O3' teal target a
    73256 
    73257 > color #14.3/a:2494 #14.3/a:2493@O3' teal target a
    73258 
    73259 > color #14.9/a:2494 #14.9/a:2493@O3' teal target a
     1527[deleted to fit within ticket limits]
     1528
    732601529
    732611530> color #25.5/a:2494 #25.5/a:2493@O3' magenta target a