id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
20748	COD bond-perception bug	Tristan Croll	Greg Couch	"{{{
Sorry for the probable double-report, but the ChimeraX Help/Report a Bug
didn't echo back to my email... if you do ""open 7703621 from cod"" you get a
bit of a mess, as pictured... apparently, for whatever reason, the standard
for metal-organic framework structures is to only explicitly report the
metal coordination bonds, not the covalent ones. ChimeraX's automatic bond
perception chokes on this - it skips any atom that already has a bond
specified, assuming that means *all* its bonds have been specified.
[image: image.png]

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address: 3rd Floor 1 Ashley Road, Altrincham, Cheshire, United Kingdom, 
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}}}

[[Image(image.png)]]
"	defect	closed	normal		Input/Output		duplicate						all	ChimeraX