id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 20831 ChimeraX bug report submission swlovell@… "{{{ The following bug report has been submitted: Platform: Linux-6.17.0-1030-oem-x86_64-with-glibc2.39 ChimeraX Version: 1.12rc202605142114 (2026-05-14 21:14:16 UTC) Description I'm trying to run Boltz2 in Chimera and the installation went fine. However, I'm getting the error in the attached file. I have triton 3.3.0 installed as shown below. (base) swlovell@crystal15:~$ python -c ""import triton; print(triton.__version__)"" 3.3.0 Log: Startup Messages --- warning | GBM is not supported with the current configuration. Fallback to Vulkan rendering in Chromium. UCSF ChimeraX version: 1.12rc202605142114 (2026-05-14) © 2016-2026 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX dbus reply error: [ ""org.freedesktop.DBus.Error.UnknownMethod"" ] ""No such interface “org.freedesktop.portal.Settings” on object at path /org/freedesktop/portal/desktop"" [Repeated 1 time(s)] > open > /home/swlovell/structures/Gonzalez_Lina/TANGO2/PDBs/TANGO2_Protein_no_OCS.pdb > format pdb Chain information for TANGO2_Protein_no_OCS.pdb #1 --- Chain | Description A | No description available Computing secondary structure > ui tool show Boltz > boltz predict protein > CIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNTIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS > ligandSmiles > C[C@H](CCC(O)=O)[C@H]1CC[C@H]2[C@@H]3CC[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@]12C > resultsDirectory > /home/swlovell/structures/Gonzalez_Lina/TANGO2/Docking/boltz2/Lithocholic_acid/ > affinity > C[C@H](CCC(O)=O)[C@H]1CC[C@H]2[C@@H]3CC[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@]12C > steering true Boltz prediction directory /home/swlovell/structures/Gonzalez_Lina/TANGO2/Docking/boltz2/Lithocholic_acid/ already exists. Files will be overwritten. Running Boltz prediction of protein with 275 residues, 1 ligands C[C@H](CCC(O)=O)[C@H]1CC[C@H]2[C@@H]3CC[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@]12C on gpu Using cached multiple sequence alignment /home/swlovell/Downloads/ChimeraX/BoltzMSA/TANGO2_lithocholic Running boltz prediction failed with exit code 0: command: /home/swlovell/boltz22/bin/boltz predict /home/swlovell/structures/Gonzalez_Lina/TANGO2/Docking/boltz2/Lithocholic_acid/.yaml --use_potentials --accelerator gpu stdout: Boltz version 2.2.0 Checking input data. Processing 1 inputs with 1 threads. Failed to process /home/swlovell/structures/Gonzalez_Lina/TANGO2/Docking/boltz2/Lithocholic_acid/.yaml. Skipping. Error: Unable to parse filetype , please provide a .fasta or .yaml file.. stderr: 0%| | 0/1 [00:00 boltz predict protein > CIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNTIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS > ligandSmiles > C[C@H](CCC(O)=O)[C@H]1CC[C@H]2[C@@H]3CC[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@]12C > name TANGO2_lithocholic_acid resultsDirectory > /home/swlovell/structures/Gonzalez_Lina/TANGO2/Docking/boltz2/Lithocholic_acid/ > affinity > C[C@H](CCC(O)=O)[C@H]1CC[C@H]2[C@@H]3CC[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@]12C > steering true Boltz prediction directory /home/swlovell/structures/Gonzalez_Lina/TANGO2/Docking/boltz2/Lithocholic_acid/ already exists. Files will be overwritten. Running Boltz prediction of protein with 275 residues, 1 ligands C[C@H](CCC(O)=O)[C@H]1CC[C@H]2[C@@H]3CC[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@]12C on gpu Using cached multiple sequence alignment /home/swlovell/Downloads/ChimeraX/BoltzMSA/TANGO2_lithocholic Running boltz prediction failed with exit code 1: command: /home/swlovell/boltz22/bin/boltz predict /home/swlovell/structures/Gonzalez_Lina/TANGO2/Docking/boltz2/Lithocholic_acid/TANGO2_lithocholic_acid.yaml --use_potentials --accelerator gpu stdout: Boltz version 2.2.0 Checking input data. All inputs are already processed. Processing 0 inputs with 0 threads. Running structure prediction for 1 input. Predicting: | | 0/? [00:00 sys.exit(cli()) ^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site-packages/click/core.py"", line 1157, in __call__ return self.main(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site-packages/click/core.py"", line 1078, in main rv = self.invoke(ctx) ^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site-packages/click/core.py"", line 1688, in invoke return _process_result(sub_ctx.command.invoke(sub_ctx)) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site-packages/click/core.py"", line 1434, in invoke return ctx.invoke(self.callback, **ctx.params) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site-packages/click/core.py"", line 783, in invoke return __callback(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site-packages/boltz/main.py"", line 1355, in predict trainer.predict( File ""/home/swlovell/boltz22/lib/python3.11/site- packages/pytorch_lightning/trainer/trainer.py"", line 859, in predict return call._call_and_handle_interrupt( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/pytorch_lightning/trainer/call.py"", line 47, in _call_and_handle_interrupt return trainer_fn(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/pytorch_lightning/trainer/trainer.py"", line 898, in _predict_impl results = self._run(model, ckpt_path=ckpt_path) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/pytorch_lightning/trainer/trainer.py"", line 982, in _run results = self._run_stage() ^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/pytorch_lightning/trainer/trainer.py"", line 1021, in _run_stage return self.predict_loop.run() ^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/pytorch_lightning/loops/utilities.py"", line 179, in _decorator return loop_run(self, *args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/pytorch_lightning/loops/prediction_loop.py"", line 125, in run self._predict_step(batch, batch_idx, dataloader_idx, dataloader_iter) File ""/home/swlovell/boltz22/lib/python3.11/site- packages/pytorch_lightning/loops/prediction_loop.py"", line 255, in _predict_step predictions = call._call_strategy_hook(trainer, ""predict_step"", *step_args) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/pytorch_lightning/trainer/call.py"", line 323, in _call_strategy_hook output = fn(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/pytorch_lightning/strategies/strategy.py"", line 438, in predict_step return self.lightning_module.predict_step(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/boltz/model/models/boltz2.py"", line 1059, in predict_step out = self( ^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/torch/nn/modules/module.py"", line 1751, in _wrapped_call_impl return self._call_impl(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/torch/nn/modules/module.py"", line 1762, in _call_impl return forward_call(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/boltz/model/models/boltz2.py"", line 464, in forward z = z + template_module( ^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/torch/nn/modules/module.py"", line 1751, in _wrapped_call_impl return self._call_impl(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/torch/nn/modules/module.py"", line 1762, in _call_impl return forward_call(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/boltz/model/modules/trunkv2.py"", line 498, in forward v = v + self.pairformer(v, pair_mask, use_kernels=use_kernels) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/torch/nn/modules/module.py"", line 1751, in _wrapped_call_impl return self._call_impl(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/torch/nn/modules/module.py"", line 1762, in _call_impl return forward_call(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/boltz/model/layers/pairformer.py"", line 329, in forward z = layer( ^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/torch/nn/modules/module.py"", line 1751, in _wrapped_call_impl return self._call_impl(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/torch/nn/modules/module.py"", line 1762, in _call_impl return forward_call(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/boltz/model/layers/pairformer.py"", line 243, in forward z = z + dropout * self.tri_mul_out( ^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/torch/nn/modules/module.py"", line 1751, in _wrapped_call_impl return self._call_impl(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/torch/nn/modules/module.py"", line 1762, in _call_impl return forward_call(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/boltz/model/layers/triangular_mult.py"", line 92, in forward return kernel_triangular_mult( ^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/torch/_dynamo/eval_frame.py"", line 838, in _fn return fn(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/boltz/model/layers/triangular_mult.py"", line 23, in kernel_triangular_mult return triangle_multiplicative_update( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/cuequivariance_torch/primitives/triangle.py"", line 314, in triangle_multiplicative_update return f( ^^ File ""/home/swlovell/boltz22/lib/python3.11/site- packages/cuequivariance_ops_torch/__init__.py"", line 97, in triangle_multiplicative_update _raise_triton_import_error(""triangle_multiplicative_update"") File ""/home/swlovell/boltz22/lib/python3.11/site- packages/cuequivariance_ops_torch/__init__.py"", line 91, in _raise_triton_import_error raise Exception( Exception: Failed to import Triton-based component: triangle_multiplicative_update: Traceback (most recent call last): File ""/home/swlovell/boltz22/lib/python3.11/site- packages/cuequivariance_ops_torch/attention_pair_bias.py"", line 27, in from torch.fx._symbolic_trace import is_fx_symbolic_tracing ImportError: cannot import name 'is_fx_symbolic_tracing' from 'torch.fx._symbolic_trace' (/home/swlovell/boltz22/lib/python3.11/site- packages/torch/fx/_symbolic_trace.py) During handling of the above exception, another exception occurred: Traceback (most recent call last): File ""/home/swlovell/boltz22/lib/python3.11/site- packages/cuequivariance_ops_torch/__init__.py"", line 64, in from cuequivariance_ops_torch.attention_pair_bias import ( File ""/home/swlovell/boltz22/lib/python3.11/site- packages/cuequivariance_ops_torch/attention_pair_bias.py"", line 29, in from torch.fx._symbolic_trace import ( ImportError: cannot import name 'is_fx_tracing_symbolic_tracing' from 'torch.fx._symbolic_trace' (/home/swlovell/boltz22/lib/python3.11/site- packages/torch/fx/_symbolic_trace.py) Please make sure to install triton==3.3.0. Other versions may not work! sys:1: DeprecationWarning: builtin type swigvarlink has no __module__ attribute OpenGL version: 3.3.0 NVIDIA 580.173.02 OpenGL renderer: NVIDIA RTX PRO 4500 Blackwell/PCIe/SSE2 OpenGL vendor: NVIDIA Corporation Python: 3.11.13 Locale: en_US.UTF-8 Qt version: PyQt6 6.10.2, Qt 6.10.0 Qt runtime version: 6.10.1 Qt platform: xcb XDG_SESSION_TYPE=x11 DESKTOP_SESSION=xfce XDG_SESSION_DESKTOP=xfce XDG_CURRENT_DESKTOP=XFCE DISPLAY=:0.0 Manufacturer: Dell Inc. Model: Dell Pro Max Tower T2 FCT2250 OS: Ubuntu 24.04 Architecture: 64bit ELF Virtual Machine: none CPU: 24 Intel(R) Core(TM) Ultra 9 285K Cache Size: 36864 KB Memory: total used free shared buff/cache available Mem: 125Gi 7.2Gi 98Gi 373Mi 21Gi 118Gi Swap: 8.0Gi 0B 8.0Gi Graphics: 00:02.0 VGA compatible controller [0300]: Intel Corporation Arrow Lake-U [Intel Graphics] [8086:7d67] (rev 06) Subsystem: Dell Device [1028:0ce1] Kernel driver in use: i915 Installed Packages: accessible-pygments: 0.0.5 aiohappyeyeballs: 2.6.1 aiohttp: 3.13.1 aiosignal: 1.4.0 alabaster: 1.0.0 annotated-types: 0.7.0 anyio: 4.13.0 appdirs: 1.4.4 asttokens: 3.0.1 attrs: 26.1.0 babel: 2.18.0 beautifulsoup4: 4.13.5 biopython: 1.83 blockdiag: 3.0.0 blosc2: 4.2.0 bs4: 0.0.2 build: 1.3.0 certifi: 2026.4.22 cftime: 1.6.5 charset-normalizer: 3.4.7 ChimeraX-AddCharge: 1.5.20 ChimeraX-AddH: 2.2.8 ChimeraX-AlignmentAlgorithms: 2.0.2 ChimeraX-AlignmentHdrs: 3.6.2 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 3.2 ChimeraX-AlphaFold: 1.0.1 ChimeraX-AltlocExplorer: 1.2 ChimeraX-AmberInfo: 1.0 ChimeraX-Animations: 1.0 ChimeraX-Aniso: 1.3.2 ChimeraX-Arrays: 1.1 ChimeraX-Atomic: 1.67.1 ChimeraX-AtomicLibrary: 14.4 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.4 ChimeraX-BasicActions: 1.1.3 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 3.0.0 ChimeraX-Boltz: 1.1 ChimeraX-BondRot: 2.0.4 ChimeraX-BugReporter: 1.0.2 ChimeraX-BuildStructure: 2.13.1 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.6.0 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.4.1 ChimeraX-ChangeChains: 1.1 ChimeraX-CheckWaters: 1.5 ChimeraX-ChemGroup: 2.0.2 ChimeraX-Clashes: 2.4 ChimeraX-Cluster: 1.0 ChimeraX-ColorActions: 1.0.5 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.8 ChimeraX-CommandLine: 1.3.1 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.12rc202605142114 ChimeraX-CoreFormats: 1.2 ChimeraX-coulombic: 1.4.5 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.2.4 ChimeraX-Dicom: 1.2.7 ChimeraX-DistMonitor: 1.4.2 ChimeraX-DockPrep: 1.2.1 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ESMFold: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.3 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.4.1 ChimeraX-Hbonds: 2.5.3 ChimeraX-Help: 1.3 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.4 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-IUPAC: 1.0 ChimeraX-KVFinder: 1.8.2 ChimeraX-Label: 1.5 ChimeraX-LightingGUI: 1.0 ChimeraX-LinuxSupport: 1.0.1 ChimeraX-ListInfo: 1.3.1 ChimeraX-Log: 1.2.2 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.9.3 ChimeraX-Map: 1.3 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0.1 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.2 ChimeraX-MatchAlign: 1.1 ChimeraX-MatchMaker: 2.4 ChimeraX-MCopy: 1.0 ChimeraX-MCPServer: 0.2.0 ChimeraX-MDcrds: 2.19 ChimeraX-MedicalToolbar: 1.1 ChimeraX-Meeting: 1.0.1 ChimeraX-Minimize: 1.3.8 ChimeraX-MLP: 1.1.1 ChimeraX-mmCIF: 2.16 ChimeraX-MMTF: 2.2 ChimeraX-ModelArchive: 1.0 ChimeraX-Modeller: 1.5.23 ChimeraX-ModelPanel: 1.6.1 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0.3 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0.1 ChimeraX-MutationScores: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nifti: 1.2 ChimeraX-NMRSTAR: 1.0.2 ChimeraX-NRRD: 1.2 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.15.4 ChimeraX-OpenFold: 1.0 ChimeraX-OrthoPick: 1.0.1 ChimeraX-PDB: 2.7.13 ChimeraX-PDBBio: 1.0.1 ChimeraX-PDBLibrary: 1.0.5 ChimeraX-PDBMatrices: 1.0 ChimeraX-PhenixUI: 1.6.4 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1.4 ChimeraX-ProfileGrids: 1.6 ChimeraX-PubChem: 2.2 ChimeraX-QScore: 1.2 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.2 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.8.2 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.3.3 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 4.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.2 ChimeraX-Scenes: 0.3.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.3 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-Segmentations: 3.5.12 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.18 ChimeraX-Shape: 1.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.2.1 ChimeraX-ShowSequences: 1.0.3 ChimeraX-SideView: 1.0.1 ChimeraX-SimilarStructures: 1.0.1 ChimeraX-Smiles: 2.1.2 ChimeraX-SmoothLines: 1.0 ChimeraX-SNFG: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.19.3 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.2.1 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.5.3 ChimeraX-TapeMeasure: 1.0 ChimeraX-TaskManager: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.2.4 ChimeraX-ToolshedUtils: 1.2.4 ChimeraX-Topography: 1.0 ChimeraX-ToQuest: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.50.6 ChimeraX-Umap: 1.0 ChimeraX-uniprot: 2.3.2 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDock: 1.6.2 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-vrml: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.5 ChimeraX-Zone: 1.0.1 click: 8.4.0 colorama: 0.4.6 comm: 0.2.3 contourpy: 1.3.3 coverage: 7.14.0 cxservices: 1.2.3 cycler: 0.12.1 Cython: 3.2.4 debugpy: 1.8.20 decorator: 5.3.1 DiffFit: 0.7.0 distro: 1.9.0 docutils: 0.21.2 executing: 2.2.1 filelock: 3.19.1 fonttools: 4.63.0 frozenlist: 1.8.0 fsspec: 2026.4.0 funcparserlib: 2.0.0a0 glfw: 2.10.0 grako: 3.16.5 h11: 0.16.0 h5py: 3.16.0 html2text: 2025.4.15 httpcore: 1.0.9 httpx: 0.28.1 httpx-sse: 0.4.3 idna: 3.15 ihm: 2.2 imagecodecs: 2024.6.1 imagesize: 2.0.0 iniconfig: 2.3.0 ipykernel: 7.1.0 ipython: 9.9.0 ipython_pygments_lexers: 1.1.1 jedi: 0.19.2 Jinja2: 3.1.6 jsonschema: 4.26.0 jsonschema-specifications: 2025.9.1 jupyter_client: 8.8.0 jupyter_core: 5.9.1 kiwisolver: 1.5.0 line_profiler: 5.0.0 lxml: 6.0.2 lz4: 4.3.2 Markdown: 3.8.2 MarkupSafe: 3.0.3 matplotlib: 3.10.7 matplotlib-inline: 0.2.2 mcp: 1.18.0 MolecularDynamicsViewer: 1.6 mpmath: 1.3.0 mrcfile: 1.5.0 msgpack: 1.1.1 multidict: 6.7.1 narwhals: 2.21.2 ndindex: 1.10.1 nest-asyncio: 1.6.0 netCDF4: 1.6.5 networkx: 3.3 nibabel: 5.2.0 nptyping: 2.5.0 numexpr: 2.14.1 numpy: 2.4.6 numpy: 1.26.4 nvidia-cublas-cu12: 12.1.3.1 nvidia-cuda-cupti-cu12: 12.1.105 nvidia-cuda-nvrtc-cu12: 12.1.105 nvidia-cuda-runtime-cu12: 12.1.105 nvidia-cudnn-cu12: 8.9.2.26 nvidia-cufft-cu12: 11.0.2.54 nvidia-curand-cu12: 10.3.2.106 nvidia-cusolver-cu12: 11.4.5.107 nvidia-cusparse-cu12: 12.1.0.106 nvidia-nccl-cu12: 2.19.3 nvidia-nvjitlink-cu12: 12.9.86 nvidia-nvtx-cu12: 12.1.105 OpenMM: 8.4.0 OpenMM-CUDA-12: 8.4.0 openvr: 1.26.701 packaging: 25.0 ParmEd: 4.2.2 parso: 0.8.7 pep517: 0.13.1 pexpect: 4.9.0 pickleshare: 0.7.5 pillow: 11.3.0 pip: 25.2 pkginfo: 1.12.1.2 platformdirs: 4.9.6 plotly: 6.7.0 pluggy: 1.6.0 prompt_toolkit: 3.0.52 propcache: 0.5.2 psutil: 7.0.0 ptyprocess: 0.7.0 pure_eval: 0.2.3 py-cpuinfo: 9.0.0 pybind11: 3.0.1 pycollada: 0.8 pydantic: 2.13.4 pydantic-settings: 2.14.1 pydantic_core: 2.46.4 pydata-sphinx-theme: 0.17.1 pydicom: 2.4.4 Pygments: 2.18.0 pyKVFinder: 0.9.3 pynmrstar: 3.5.1 pynrrd: 1.0.0 PyOpenGL: 3.1.10 PyOpenGL-accelerate: 3.1.10 pyopenxr: 1.1.4501 pyparsing: 3.3.2 pyproject_hooks: 1.2.0 PyQt6: 6.10.2 PyQt6-Qt6: 6.10.1 PyQt6-WebEngine: 6.10.0 PyQt6-WebEngine-Qt6: 6.10.1 PyQt6_sip: 13.10.3 pytest: 9.0.3 pytest-cov: 7.1.0 python-dateutil: 2.9.0.post0 python-dotenv: 1.2.2 python-multipart: 0.0.29 pyzmq: 27.1.0 qtconsole: 5.7.0 QtPy: 2.4.3 qtshim: 1.2.2 RandomWords: 0.4.0 referencing: 0.37.0 requests: 2.32.5 roman-numerals: 4.1.0 rpds-py: 0.30.0 scipy: 1.14.0 setuptools: 80.9.0 sfftk-rw: 0.8.1 six: 1.17.0 snowballstemmer: 3.0.1 sortedcontainers: 2.4.0 soupsieve: 2.8.3 Sphinx: 9.0.4 sphinx-autodoc-typehints: 3.6.1 sphinxcontrib-applehelp: 2.0.0 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 2.0.0 sphinxcontrib-htmlhelp: 2.1.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 2.0.0 sphinxcontrib-serializinghtml: 2.0.0 sse-starlette: 3.4.4 stack-data: 0.6.3 starlette: 1.0.0 superqt: 0.7.6 sympy: 1.14.0 tables: 3.10.2 tcia_utils: 3.2.1 threadpoolctl: 3.6.0 tifffile: 2025.3.13 tinyarray: 1.2.5 tomlkit: 0.15.1 torch: 2.2.1 tornado: 6.5.5 tqdm: 4.67.3 traitlets: 5.14.3 triton: 2.2.0 typing-inspection: 0.4.2 typing_extensions: 4.15.0 Unidecode: 1.4.0 urllib3: 2.7.0 uvicorn: 0.47.0 wcwidth: 0.7.0 webcolors: 24.11.1 wheel: 0.45.1 wheel-filename: 1.4.2 yarl: 1.23.0 File attachment: Boltz_error }}} [attachment:""Boltz_error""] " defect new normal Unassigned