id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
3367	Save position matrices for subtomogram boxes	m-schmid@…	Tom Goddard	"Would like to be able to write out the position matrices for subtomogram boxes.  This is useful after using volume resample to create tens of subvolumes in VR by moving around a template volume.  Then those volumes are saved

  save boxes%03d.mrc models #4-35

Would like to save the matrices too perhaps with

  save boxes%03d.mrc models #4-35 matrices boxes.positions

and also just the matrices could be saved

  save boxes.positions models #4-35

The written boxes.positions could have one line per model giving the model name followed by 12 numbers giving the 3x4 positioning matrix.

It would also be useful to read in these matrices and place copies of a new map (subtomogram average) at each of those positions.
"	enhancement	closed	moderate		Volume Data		fixed		Elaine Meng				all	ChimeraX