Changes between Initial Version and Version 1 of Ticket #3717


Ignore:
Timestamp:
Sep 15, 2020, 8:28:40 AM (5 years ago)
Author:
Eric Pettersen
Comment:

Legend:

Unmodified
Added
Removed
Modified

  • Ticket #3717

    • Property Component Unassigned → Third Party
    • Property Owner set to Tristan Croll
    • Property Platform → all
    • Property Project → ChimeraX
    • Property Status new → assigned
    • Property Summary ChimeraX bug report submission → ISOLDE: 'OpenMM_Thread_Handler' object has no attribute '_c_pointer'

  • Ticket #3717 – Description

    initial v1  
    239239See log for complete Python traceback. 
    240240 
    241 Traceback (most recent call last): 
    242 File
    243 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    244 packages/chimerax/core/triggerset.py", line 130, in invoke 
    245 return self._func(self._name, data) 
    246 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    247 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    248 _model_changed_cb 
    249 self.update_scatter() 
    250 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    251 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    252 if not self.visible: 
    253 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    254 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    255 return self.parent.isVisible() 
    256 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    257 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    258 return self.container.parentWidget() 
    259 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    260  
    261 Error processing trigger "changes": 
    262 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    263  
    264 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    265 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    266 return self.container.parentWidget() 
    267  
    268 See log for complete Python traceback. 
    269  
    270 Traceback (most recent call last): 
    271 File
    272 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    273 packages/chimerax/core/triggerset.py", line 130, in invoke 
    274 return self._func(self._name, data) 
    275 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    276 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    277 _model_changed_cb 
    278 self.update_scatter() 
    279 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    280 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    281 if not self.visible: 
    282 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    283 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    284 return self.parent.isVisible() 
    285 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    286 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    287 return self.container.parentWidget() 
    288 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    289  
    290 Error processing trigger "changes": 
    291 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    292  
    293 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    294 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    295 return self.container.parentWidget() 
    296  
    297 See log for complete Python traceback. 
    298  
    299 Traceback (most recent call last): 
    300 File
    301 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    302 packages/chimerax/core/triggerset.py", line 130, in invoke 
    303 return self._func(self._name, data) 
    304 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    305 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    306 _model_changed_cb 
    307 self.update_scatter() 
    308 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    309 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    310 if not self.visible: 
    311 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    312 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    313 return self.parent.isVisible() 
    314 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    315 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    316 return self.container.parentWidget() 
    317 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    318  
    319 Error processing trigger "changes": 
    320 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    321  
    322 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    323 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    324 return self.container.parentWidget() 
    325  
    326 See log for complete Python traceback. 
    327  
    328 Traceback (most recent call last): 
    329 File
    330 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    331 packages/chimerax/core/triggerset.py", line 130, in invoke 
    332 return self._func(self._name, data) 
    333 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    334 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    335 _model_changed_cb 
    336 self.update_scatter() 
    337 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    338 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    339 if not self.visible: 
    340 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    341 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    342 return self.parent.isVisible() 
    343 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    344 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    345 return self.container.parentWidget() 
    346 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    347  
    348 Error processing trigger "changes": 
    349 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    350  
    351 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    352 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    353 return self.container.parentWidget() 
    354  
    355 See log for complete Python traceback. 
    356  
    357 Traceback (most recent call last): 
    358 File
    359 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    360 packages/chimerax/core/triggerset.py", line 130, in invoke 
    361 return self._func(self._name, data) 
    362 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    363 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    364 _model_changed_cb 
    365 self.update_scatter() 
    366 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    367 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    368 if not self.visible: 
    369 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    370 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    371 return self.parent.isVisible() 
    372 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    373 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    374 return self.container.parentWidget() 
    375 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    376  
    377 Error processing trigger "changes": 
    378 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    379  
    380 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    381 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    382 return self.container.parentWidget() 
    383  
    384 See log for complete Python traceback. 
    385  
    386 Traceback (most recent call last): 
    387 File
    388 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    389 packages/chimerax/core/triggerset.py", line 130, in invoke 
    390 return self._func(self._name, data) 
    391 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    392 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    393 _model_changed_cb 
    394 self.update_scatter() 
    395 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    396 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    397 if not self.visible: 
    398 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    399 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    400 return self.parent.isVisible() 
    401 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    402 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    403 return self.container.parentWidget() 
    404 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    405  
    406 Error processing trigger "changes": 
    407 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    408  
    409 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    410 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    411 return self.container.parentWidget() 
    412  
    413 See log for complete Python traceback. 
    414  
    415 Traceback (most recent call last): 
    416 File
    417 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    418 packages/chimerax/core/triggerset.py", line 130, in invoke 
    419 return self._func(self._name, data) 
    420 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    421 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    422 _model_changed_cb 
    423 self.update_scatter() 
    424 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    425 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    426 if not self.visible: 
    427 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    428 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    429 return self.parent.isVisible() 
    430 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    431 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    432 return self.container.parentWidget() 
    433 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    434  
    435 Error processing trigger "changes": 
    436 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    437  
    438 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    439 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    440 return self.container.parentWidget() 
    441  
    442 See log for complete Python traceback. 
    443  
    444 Traceback (most recent call last): 
    445 File
    446 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    447 packages/chimerax/core/triggerset.py", line 130, in invoke 
    448 return self._func(self._name, data) 
    449 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    450 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    451 _model_changed_cb 
    452 self.update_scatter() 
    453 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    454 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    455 if not self.visible: 
    456 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    457 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    458 return self.parent.isVisible() 
    459 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    460 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    461 return self.container.parentWidget() 
    462 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    463  
    464 Error processing trigger "changes": 
    465 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    466  
    467 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    468 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    469 return self.container.parentWidget() 
    470  
    471 See log for complete Python traceback. 
    472  
    473 Traceback (most recent call last): 
    474 File
    475 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    476 packages/chimerax/core/triggerset.py", line 130, in invoke 
    477 return self._func(self._name, data) 
    478 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    479 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    480 _model_changed_cb 
    481 self.update_scatter() 
    482 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    483 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    484 if not self.visible: 
    485 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    486 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    487 return self.parent.isVisible() 
    488 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    489 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    490 return self.container.parentWidget() 
    491 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    492  
    493 Error processing trigger "changes": 
    494 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    495  
    496 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    497 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    498 return self.container.parentWidget() 
    499  
    500 See log for complete Python traceback. 
    501  
    502 Traceback (most recent call last): 
    503 File
    504 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    505 packages/chimerax/core/triggerset.py", line 130, in invoke 
    506 return self._func(self._name, data) 
    507 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    508 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    509 _model_changed_cb 
    510 self.update_scatter() 
    511 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    512 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    513 if not self.visible: 
    514 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    515 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    516 return self.parent.isVisible() 
    517 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    518 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    519 return self.container.parentWidget() 
    520 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    521  
    522 Error processing trigger "changes": 
    523 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    524  
    525 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    526 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    527 return self.container.parentWidget() 
    528  
    529 See log for complete Python traceback. 
    530  
    531 Traceback (most recent call last): 
    532 File
    533 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    534 packages/chimerax/core/triggerset.py", line 130, in invoke 
    535 return self._func(self._name, data) 
    536 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    537 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    538 _model_changed_cb 
    539 self.update_scatter() 
    540 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    541 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    542 if not self.visible: 
    543 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    544 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    545 return self.parent.isVisible() 
    546 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    547 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    548 return self.container.parentWidget() 
    549 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    550  
    551 Error processing trigger "changes": 
    552 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    553  
    554 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    555 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    556 return self.container.parentWidget() 
    557  
    558 See log for complete Python traceback. 
    559  
    560 Traceback (most recent call last): 
    561 File
    562 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    563 packages/chimerax/core/triggerset.py", line 130, in invoke 
    564 return self._func(self._name, data) 
    565 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    566 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    567 _model_changed_cb 
    568 self.update_scatter() 
    569 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    570 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    571 if not self.visible: 
    572 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    573 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    574 return self.parent.isVisible() 
    575 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    576 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    577 return self.container.parentWidget() 
    578 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    579  
    580 Error processing trigger "changes": 
    581 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    582  
    583 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    584 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    585 return self.container.parentWidget() 
    586  
    587 See log for complete Python traceback. 
    588  
    589 Traceback (most recent call last): 
    590 File
    591 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    592 packages/chimerax/core/triggerset.py", line 130, in invoke 
    593 return self._func(self._name, data) 
    594 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    595 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    596 _model_changed_cb 
    597 self.update_scatter() 
    598 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    599 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    600 if not self.visible: 
    601 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    602 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    603 return self.parent.isVisible() 
    604 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    605 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    606 return self.container.parentWidget() 
    607 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    608  
    609 Error processing trigger "changes": 
    610 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    611  
    612 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    613 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    614 return self.container.parentWidget() 
    615  
    616 See log for complete Python traceback. 
    617  
    618 Traceback (most recent call last): 
    619 File
    620 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    621 packages/chimerax/core/triggerset.py", line 130, in invoke 
    622 return self._func(self._name, data) 
    623 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    624 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    625 _model_changed_cb 
    626 self.update_scatter() 
    627 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    628 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    629 if not self.visible: 
    630 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    631 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    632 return self.parent.isVisible() 
    633 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    634 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    635 return self.container.parentWidget() 
    636 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    637  
    638 Error processing trigger "changes": 
    639 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    640  
    641 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    642 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    643 return self.container.parentWidget() 
    644  
    645 See log for complete Python traceback. 
    646  
    647 Traceback (most recent call last): 
    648 File
    649 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    650 packages/chimerax/core/triggerset.py", line 130, in invoke 
    651 return self._func(self._name, data) 
    652 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    653 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    654 _model_changed_cb 
    655 self.update_scatter() 
    656 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    657 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    658 if not self.visible: 
    659 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    660 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    661 return self.parent.isVisible() 
    662 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    663 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    664 return self.container.parentWidget() 
    665 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    666  
    667 Error processing trigger "changes": 
    668 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    669  
    670 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    671 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    672 return self.container.parentWidget() 
    673  
    674 See log for complete Python traceback. 
    675  
    676 Traceback (most recent call last): 
    677 File
    678 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    679 packages/chimerax/core/triggerset.py", line 130, in invoke 
    680 return self._func(self._name, data) 
    681 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    682 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    683 _model_changed_cb 
    684 self.update_scatter() 
    685 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    686 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    687 if not self.visible: 
    688 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    689 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    690 return self.parent.isVisible() 
    691 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    692 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    693 return self.container.parentWidget() 
    694 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    695  
    696 Error processing trigger "changes": 
    697 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    698  
    699 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    700 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    701 return self.container.parentWidget() 
    702  
    703 See log for complete Python traceback. 
    704  
    705 Traceback (most recent call last): 
    706 File
    707 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    708 packages/chimerax/core/triggerset.py", line 130, in invoke 
    709 return self._func(self._name, data) 
    710 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    711 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    712 _model_changed_cb 
    713 self.update_scatter() 
    714 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    715 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    716 if not self.visible: 
    717 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    718 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    719 return self.parent.isVisible() 
    720 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    721 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    722 return self.container.parentWidget() 
    723 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    724  
    725 Error processing trigger "changes": 
    726 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    727  
    728 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    729 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    730 return self.container.parentWidget() 
    731  
    732 See log for complete Python traceback. 
    733  
    734 Traceback (most recent call last): 
    735 File
    736 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    737 packages/chimerax/core/triggerset.py", line 130, in invoke 
    738 return self._func(self._name, data) 
    739 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    740 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    741 _model_changed_cb 
    742 self.update_scatter() 
    743 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    744 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    745 if not self.visible: 
    746 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    747 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    748 return self.parent.isVisible() 
    749 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    750 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    751 return self.container.parentWidget() 
    752 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    753  
    754 Error processing trigger "changes": 
    755 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    756  
    757 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    758 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    759 return self.container.parentWidget() 
    760  
    761 See log for complete Python traceback. 
    762  
    763 Traceback (most recent call last): 
    764 File
    765 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    766 packages/chimerax/core/triggerset.py", line 130, in invoke 
    767 return self._func(self._name, data) 
    768 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    769 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    770 _model_changed_cb 
    771 self.update_scatter() 
    772 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    773 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    774 if not self.visible: 
    775 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    776 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    777 return self.parent.isVisible() 
    778 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    779 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    780 return self.container.parentWidget() 
    781 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    782  
    783 Error processing trigger "changes": 
    784 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    785  
    786 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    787 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    788 return self.container.parentWidget() 
    789  
    790 See log for complete Python traceback. 
    791  
    792 Traceback (most recent call last): 
    793 File
    794 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    795 packages/chimerax/core/triggerset.py", line 130, in invoke 
    796 return self._func(self._name, data) 
    797 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    798 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    799 _model_changed_cb 
    800 self.update_scatter() 
    801 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    802 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    803 if not self.visible: 
    804 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    805 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    806 return self.parent.isVisible() 
    807 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    808 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    809 return self.container.parentWidget() 
    810 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    811  
    812 Error processing trigger "changes": 
    813 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    814  
    815 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    816 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    817 return self.container.parentWidget() 
    818  
    819 See log for complete Python traceback. 
    820  
    821 Traceback (most recent call last): 
    822 File
    823 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    824 packages/chimerax/core/triggerset.py", line 130, in invoke 
    825 return self._func(self._name, data) 
    826 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    827 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    828 _model_changed_cb 
    829 self.update_scatter() 
    830 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    831 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    832 if not self.visible: 
    833 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    834 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    835 return self.parent.isVisible() 
    836 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    837 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    838 return self.container.parentWidget() 
    839 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    840  
    841 Error processing trigger "changes": 
    842 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    843  
    844 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    845 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    846 return self.container.parentWidget() 
    847  
    848 See log for complete Python traceback. 
    849  
    850 Traceback (most recent call last): 
    851 File
    852 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    853 packages/chimerax/core/triggerset.py", line 130, in invoke 
    854 return self._func(self._name, data) 
    855 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    856 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    857 _model_changed_cb 
    858 self.update_scatter() 
    859 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    860 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    861 if not self.visible: 
    862 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    863 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    864 return self.parent.isVisible() 
    865 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    866 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    867 return self.container.parentWidget() 
    868 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    869  
    870 Error processing trigger "changes": 
    871 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    872  
    873 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    874 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    875 return self.container.parentWidget() 
    876  
    877 See log for complete Python traceback. 
    878  
    879 Traceback (most recent call last): 
    880 File
    881 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    882 packages/chimerax/core/triggerset.py", line 130, in invoke 
    883 return self._func(self._name, data) 
    884 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    885 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    886 _model_changed_cb 
    887 self.update_scatter() 
    888 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    889 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    890 if not self.visible: 
    891 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    892 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    893 return self.parent.isVisible() 
    894 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    895 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    896 return self.container.parentWidget() 
    897 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    898  
    899 Error processing trigger "changes": 
    900 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    901  
    902 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    903 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    904 return self.container.parentWidget() 
    905  
    906 See log for complete Python traceback. 
    907  
    908 Traceback (most recent call last): 
    909 File
    910 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    911 packages/chimerax/core/triggerset.py", line 130, in invoke 
    912 return self._func(self._name, data) 
    913 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    914 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    915 _model_changed_cb 
    916 self.update_scatter() 
    917 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    918 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    919 if not self.visible: 
    920 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    921 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    922 return self.parent.isVisible() 
    923 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    924 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    925 return self.container.parentWidget() 
    926 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    927  
    928 Error processing trigger "changes": 
    929 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    930  
    931 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    932 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    933 return self.container.parentWidget() 
    934  
    935 See log for complete Python traceback. 
    936  
    937 Traceback (most recent call last): 
    938 File
    939 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    940 packages/chimerax/core/triggerset.py", line 130, in invoke 
    941 return self._func(self._name, data) 
    942 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    943 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    944 _model_changed_cb 
    945 self.update_scatter() 
    946 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    947 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    948 if not self.visible: 
    949 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    950 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    951 return self.parent.isVisible() 
    952 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    953 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    954 return self.container.parentWidget() 
    955 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    956  
    957 Error processing trigger "changes": 
    958 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    959  
    960 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    961 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    962 return self.container.parentWidget() 
    963  
    964 See log for complete Python traceback. 
    965  
    966 Traceback (most recent call last): 
    967 File
    968 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    969 packages/chimerax/core/triggerset.py", line 130, in invoke 
    970 return self._func(self._name, data) 
    971 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    972 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    973 _model_changed_cb 
    974 self.update_scatter() 
    975 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    976 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    977 if not self.visible: 
    978 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    979 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    980 return self.parent.isVisible() 
    981 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    982 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    983 return self.container.parentWidget() 
    984 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    985  
    986 Error processing trigger "changes": 
    987 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    988  
    989 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    990 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    991 return self.container.parentWidget() 
    992  
    993 See log for complete Python traceback. 
    994  
    995 Traceback (most recent call last): 
    996 File
    997 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    998 packages/chimerax/core/triggerset.py", line 130, in invoke 
    999 return self._func(self._name, data) 
    1000 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1001 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    1002 _model_changed_cb 
    1003 self.update_scatter() 
    1004 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1005 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    1006 if not self.visible: 
    1007 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1008 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    1009 return self.parent.isVisible() 
    1010 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1011 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1012 return self.container.parentWidget() 
    1013 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1014  
    1015 Error processing trigger "changes": 
    1016 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1017  
    1018 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1019 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1020 return self.container.parentWidget() 
    1021  
    1022 See log for complete Python traceback. 
    1023  
    1024 Traceback (most recent call last): 
    1025 File
    1026 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    1027 packages/chimerax/core/triggerset.py", line 130, in invoke 
    1028 return self._func(self._name, data) 
    1029 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1030 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    1031 _model_changed_cb 
    1032 self.update_scatter() 
    1033 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1034 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    1035 if not self.visible: 
    1036 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1037 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    1038 return self.parent.isVisible() 
    1039 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1040 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1041 return self.container.parentWidget() 
    1042 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1043  
    1044 Error processing trigger "changes": 
    1045 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1046  
    1047 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1048 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1049 return self.container.parentWidget() 
    1050  
    1051 See log for complete Python traceback. 
    1052  
    1053 Traceback (most recent call last): 
    1054 File
    1055 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    1056 packages/chimerax/core/triggerset.py", line 130, in invoke 
    1057 return self._func(self._name, data) 
    1058 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1059 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    1060 _model_changed_cb 
    1061 self.update_scatter() 
    1062 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1063 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    1064 if not self.visible: 
    1065 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1066 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    1067 return self.parent.isVisible() 
    1068 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1069 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1070 return self.container.parentWidget() 
    1071 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1072  
    1073 Error processing trigger "changes": 
    1074 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1075  
    1076 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1077 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1078 return self.container.parentWidget() 
    1079  
    1080 See log for complete Python traceback. 
    1081  
    1082 Traceback (most recent call last): 
    1083 File
    1084 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    1085 packages/chimerax/core/triggerset.py", line 130, in invoke 
    1086 return self._func(self._name, data) 
    1087 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1088 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    1089 _model_changed_cb 
    1090 self.update_scatter() 
    1091 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1092 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    1093 if not self.visible: 
    1094 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1095 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    1096 return self.parent.isVisible() 
    1097 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1098 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1099 return self.container.parentWidget() 
    1100 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1101  
    1102 Error processing trigger "changes": 
    1103 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1104  
    1105 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1106 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1107 return self.container.parentWidget() 
    1108  
    1109 See log for complete Python traceback. 
    1110  
    1111 Traceback (most recent call last): 
    1112 File
    1113 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    1114 packages/chimerax/core/triggerset.py", line 130, in invoke 
    1115 return self._func(self._name, data) 
    1116 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1117 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    1118 _model_changed_cb 
    1119 self.update_scatter() 
    1120 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1121 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    1122 if not self.visible: 
    1123 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1124 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    1125 return self.parent.isVisible() 
    1126 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1127 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1128 return self.container.parentWidget() 
    1129 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1130  
    1131 Error processing trigger "changes": 
    1132 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1133  
    1134 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1135 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1136 return self.container.parentWidget() 
    1137  
    1138 See log for complete Python traceback. 
    1139  
    1140 Traceback (most recent call last): 
    1141 File
    1142 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    1143 packages/chimerax/core/triggerset.py", line 130, in invoke 
    1144 return self._func(self._name, data) 
    1145 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1146 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    1147 _model_changed_cb 
    1148 self.update_scatter() 
    1149 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1150 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    1151 if not self.visible: 
    1152 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1153 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    1154 return self.parent.isVisible() 
    1155 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1156 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1157 return self.container.parentWidget() 
    1158 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1159  
    1160 Error processing trigger "changes": 
    1161 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1162  
    1163 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1164 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1165 return self.container.parentWidget() 
    1166  
    1167 See log for complete Python traceback. 
    1168  
    1169 Traceback (most recent call last): 
    1170 File
    1171 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    1172 packages/chimerax/core/triggerset.py", line 130, in invoke 
    1173 return self._func(self._name, data) 
    1174 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1175 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    1176 _model_changed_cb 
    1177 self.update_scatter() 
    1178 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1179 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    1180 if not self.visible: 
    1181 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1182 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    1183 return self.parent.isVisible() 
    1184 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1185 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1186 return self.container.parentWidget() 
    1187 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1188  
    1189 Error processing trigger "changes": 
    1190 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1191  
    1192 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1193 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1194 return self.container.parentWidget() 
    1195  
    1196 See log for complete Python traceback. 
    1197  
    1198 Traceback (most recent call last): 
    1199 File
    1200 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    1201 packages/chimerax/core/triggerset.py", line 130, in invoke 
    1202 return self._func(self._name, data) 
    1203 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1204 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    1205 _model_changed_cb 
    1206 self.update_scatter() 
    1207 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1208 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    1209 if not self.visible: 
    1210 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1211 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    1212 return self.parent.isVisible() 
    1213 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1214 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1215 return self.container.parentWidget() 
    1216 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1217  
    1218 Error processing trigger "changes": 
    1219 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1220  
    1221 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1222 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1223 return self.container.parentWidget() 
    1224  
    1225 See log for complete Python traceback. 
    1226  
    1227 Traceback (most recent call last): 
    1228 File
    1229 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    1230 packages/chimerax/core/triggerset.py", line 130, in invoke 
    1231 return self._func(self._name, data) 
    1232 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1233 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    1234 _model_changed_cb 
    1235 self.update_scatter() 
    1236 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1237 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    1238 if not self.visible: 
    1239 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1240 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    1241 return self.parent.isVisible() 
    1242 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1243 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1244 return self.container.parentWidget() 
    1245 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1246  
    1247 Error processing trigger "changes": 
    1248 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1249  
    1250 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1251 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1252 return self.container.parentWidget() 
    1253  
    1254 See log for complete Python traceback. 
    1255  
    1256 Traceback (most recent call last): 
    1257 File
    1258 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    1259 packages/chimerax/core/triggerset.py", line 130, in invoke 
    1260 return self._func(self._name, data) 
    1261 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1262 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    1263 _model_changed_cb 
    1264 self.update_scatter() 
    1265 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1266 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    1267 if not self.visible: 
    1268 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1269 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    1270 return self.parent.isVisible() 
    1271 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1272 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1273 return self.container.parentWidget() 
    1274 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1275  
    1276 Error processing trigger "changes": 
    1277 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1278  
    1279 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1280 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1281 return self.container.parentWidget() 
    1282  
    1283 See log for complete Python traceback. 
    1284  
    1285 Traceback (most recent call last): 
    1286 File
    1287 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    1288 packages/chimerax/core/triggerset.py", line 130, in invoke 
    1289 return self._func(self._name, data) 
    1290 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1291 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    1292 _model_changed_cb 
    1293 self.update_scatter() 
    1294 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1295 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    1296 if not self.visible: 
    1297 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1298 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    1299 return self.parent.isVisible() 
    1300 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1301 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1302 return self.container.parentWidget() 
    1303 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1304  
    1305 Error processing trigger "changes": 
    1306 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1307  
    1308 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1309 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1310 return self.container.parentWidget() 
    1311  
    1312 See log for complete Python traceback. 
    1313  
    1314 Traceback (most recent call last): 
    1315 File
    1316 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    1317 packages/chimerax/core/triggerset.py", line 130, in invoke 
    1318 return self._func(self._name, data) 
    1319 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1320 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    1321 _model_changed_cb 
    1322 self.update_scatter() 
    1323 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1324 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    1325 if not self.visible: 
    1326 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1327 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    1328 return self.parent.isVisible() 
    1329 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1330 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1331 return self.container.parentWidget() 
    1332 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1333  
    1334 Error processing trigger "changes": 
    1335 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1336  
    1337 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1338 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1339 return self.container.parentWidget() 
    1340  
    1341 See log for complete Python traceback. 
    1342  
    1343 Traceback (most recent call last): 
    1344 File
    1345 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    1346 packages/chimerax/core/triggerset.py", line 130, in invoke 
    1347 return self._func(self._name, data) 
    1348 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1349 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    1350 _model_changed_cb 
    1351 self.update_scatter() 
    1352 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1353 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    1354 if not self.visible: 
    1355 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1356 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    1357 return self.parent.isVisible() 
    1358 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1359 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1360 return self.container.parentWidget() 
    1361 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1362  
    1363 Error processing trigger "changes": 
    1364 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1365  
    1366 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1367 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1368 return self.container.parentWidget() 
    1369  
    1370 See log for complete Python traceback. 
    1371  
    1372 Traceback (most recent call last): 
    1373 File
    1374 "/Applications/ChimeraX-0.91.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-
    1375 packages/chimerax/core/triggerset.py", line 130, in invoke 
    1376 return self._func(self._name, data) 
    1377 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1378 packages/chimerax/isolde/validation/ramaplot.py", line 275, in
    1379 _model_changed_cb 
    1380 self.update_scatter() 
    1381 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1382 packages/chimerax/isolde/validation/ramaplot.py", line 372, in update_scatter 
    1383 if not self.visible: 
    1384 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1385 packages/chimerax/isolde/validation/ramaplot.py", line 283, in visible 
    1386 return self.parent.isVisible() 
    1387 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1388 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1389 return self.container.parentWidget() 
    1390 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1391  
    1392 Error processing trigger "changes": 
    1393 RuntimeError: wrapped C/C++ object of type QVBoxLayout has been deleted 
    1394  
    1395 File "/Users/srehan/Library/Application Support/ChimeraX/0.91/site-
    1396 packages/chimerax/isolde/validation/ramaplot.py", line 279, in parent 
    1397 return self.container.parentWidget() 
    1398  
    1399 See log for complete Python traceback. 
    1400  
     241
     242[deleted quite a few of these]
     243
    1401244Traceback (most recent call last): 
    1402245File