id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
518	"findclash gives traceback unless ""test self"" specified"	Elaine Meng	Eric Pettersen	"Re the closed ticket #502:

Don’t know how much of a fix this is, since using the command gives a traceback now.  The “test other” option is the default, but it gives the traceback.  Thus one has to explicitly use a different “test” value.  Unfortunately usage also shows “test atomspec” and “test model” but they are not implemented either and give a similar traceback. The only allowed value is “test self” … so including the lack of hbond correction and the misleading usage info, it isn’t particularly usable.  I haven’t documented it. 

I would guess (I may be wrong) that the simplest fix would be to implement the other ""test"" options. I understand everybody's too busy, just making a ticket so it doesn't fall into a black hole forever. May need to be reassigned.

Example:
open 1zik
findclash protein
Traceback (most recent call last):
File ""/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.5/lib/python3.5/site-packages/chimerax/cmd_line/tool.py"", line 158, in execute
cmd.run(cmd_text)
File ""/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.5/lib/python3.5/site-packages/chimerax/core/commands/cli.py"", line 2255, in run
result = ci.function(session, **kw_args)
File ""/Users/chimera/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.5/lib/python3.5/site-packages/chimerax/exp_cmd/findclash.py"", line 29, in findclash
raise LimitationError(""findclash test \""%s\"" not implemented"" % test)
chimerax.core.errors.LimitationError: findclash test ""other"" not implemented"	defect	closed	major		Structure Analysis		wontfix		Eric Pettersen				all	ChimeraX