id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 5683 Graphics crash, macOS 10.15.7, Intel Iris Graphics 6100 karin.wallden@… Tom Goddard "{{{ The following bug report has been submitted: Platform: Darwin-19.6.0-x86_64-i386-64bit ChimeraX Version: 1.1.1 (2020-10-07 08:32:49 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. Process: ChimeraX [56690] Path: /Applications/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX Identifier: edu.ucsf.cgl.ChimeraX Version: 1.1.1 (1.1.1.0) Code Type: X86-64 (Native) Parent Process: ??? [1] Responsible: ChimeraX [56690] User ID: 3001 Date/Time: 2021-11-25 08:22:21.843 +0100 OS Version: Mac OS X 10.15.7 (19H1519) Report Version: 12 Anonymous UUID: FDD08907-3238-B57C-6385-785AD28BAA0D Sleep/Wake UUID: C649D1B9-F53B-4976-96F3-0459711BD9B0 Time Awake Since Boot: 1000000 seconds Time Since Wake: 49000 seconds System Integrity Protection: enabled Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread Exception Type: EXC_CRASH (SIGABRT) Exception Codes: 0x0000000000000000, 0x0000000000000000 Exception Note: EXC_CORPSE_NOTIFY Application Specific Information: abort() called Application Specific Signatures: Graphics hardware encountered an error and was reset: 0x00000813 Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread 0 libsystem_kernel.dylib 0x00007fff6db5a33a __pthread_kill + 10 1 libsystem_pthread.dylib 0x00007fff6dc16e60 pthread_kill + 430 2 libsystem_c.dylib 0x00007fff6da7193e raise + 26 3 libsystem_platform.dylib 0x00007fff6dc0b5fd _sigtramp + 29 4 ??? 000000000000000000 0 + 0 5 libsystem_c.dylib 0x00007fff6dae1808 abort + 120 6 libGPUSupportMercury.dylib 0x00007fff54dda0a5 gpusGenerateCrashLog.cold.1 + 95 7 libGPUSupportMercury.dylib 0x00007fff54dd118f gpusGenerateCrashLog + 89 8 com.apple.driver.AppleIntelBDWGraphicsGLDriver 0x00007fff28ffc640 gpusKillClientExt + 9 9 libGPUSupportMercury.dylib 0x00007fff54dd26a1 gpusSubmitDataBuffers + 490 10 com.apple.driver.AppleIntelBDWGraphicsGLDriver 0x00007fff28bd4412 IntelCommandBuffer::getNew(GLDContextRec*) + 48 11 com.apple.driver.AppleIntelBDWGraphicsGLDriver 0x00007fff28bd426c intelSubmitCommands + 171 12 com.apple.driver.AppleIntelBDWGraphicsGLDriver 0x00007fff28c59cea gldPresentFramebufferData + 120 13 GLEngine 0x00007fff3e4978d1 glSwap_Exec + 97 14 com.apple.opengl 0x00007fff3e479473 CGLFlushDrawable + 59 15 com.apple.AppKit 0x00007fff30f66faa -[NSOpenGLContext flushBuffer] + 20 16 libqcocoa.dylib 0x00000001222c7d3d 0x122271000 + 355645 17 QtGui 0x000000011800ea6c QOpenGLContext::swapBuffers(QSurface*) + 412 18 QtGui.so 0x000000011a9e259f meth_QOpenGLContext_swapBuffers(_object*, _object*) + 95 19 org.python.python 0x000000010e76d382 _PyMethodDef_RawFastCallKeywords + 226 20 org.python.python 0x000000010e76c8b9 _PyCFunction_FastCallKeywords + 41 21 org.python.python 0x000000010e841b60 call_function + 656 22 org.python.python 0x000000010e83e817 _PyEval_EvalFrameDefault + 26567 23 org.python.python 0x000000010e842a2c _PyEval_EvalCodeWithName + 3276 24 org.python.python 0x000000010e76c879 _PyFunction_FastCallKeywords + 217 25 org.python.python 0x000000010e841bd4 call_function + 772 26 org.python.python 0x000000010e83e7fa _PyEval_EvalFrameDefault + 26538 27 org.python.python 0x000000010e76cd61 function_code_fastcall + 177 28 org.python.python 0x000000010e841bd4 call_function + 772 29 org.python.python 0x000000010e83e7fa _PyEval_EvalFrameDefault + 26538 30 org.python.python 0x000000010e842a2c _PyEval_EvalCodeWithName + 3276 31 org.python.python 0x000000010e76c879 _PyFunction_FastCallKeywords + 217 32 org.python.python 0x000000010e841bd4 call_function + 772 33 org.python.python 0x000000010e8385c4 _PyEval_EvalFrameDefault + 1396 34 org.python.python 0x000000010e76cd61 function_code_fastcall + 177 35 org.python.python 0x000000010e841bd4 call_function + 772 36 org.python.python 0x000000010e83e7fa _PyEval_EvalFrameDefault + 26538 37 org.python.python 0x000000010e76cd61 function_code_fastcall + 177 38 org.python.python 0x000000010e76d873 _PyObject_Call_Prepend + 131 39 org.python.python 0x000000010e76c9d8 PyObject_Call + 136 40 QtCore.so 0x000000011a765f17 PyQtSlot::call(_object*, _object*) const + 39 41 QtCore.so 0x000000011a765e26 PyQtSlot::invoke(void**, _object*, void*, bool) const + 374 42 QtCore.so 0x000000011a766925 PyQtSlotProxy::unislot(void**) + 85 43 QtCore.so 0x000000011a76689a PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**) + 58 44 QtCore 0x000000011870f13d QMetaObject::activate(QObject*, int, int, void**) + 1773 45 QtCore 0x00000001187171f2 QTimer::timerEvent(QTimerEvent*) + 98 46 QtCore.so 0x000000011a65c028 sipQTimer::timerEvent(QTimerEvent*) + 120 47 QtCore 0x0000000118707ab6 QObject::event(QEvent*) + 102 48 QtCore.so 0x000000011a65be9b sipQTimer::event(QEvent*) + 187 49 QtWidgets 0x00000001179f267d QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269 50 QtWidgets 0x00000001179f3a82 QApplication::notify(QObject*, QEvent*) + 594 51 QtWidgets.so 0x000000011525f3ca sipQApplication::notify(QObject*, QEvent*) + 234 52 QtCore 0x00000001186de324 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212 53 QtCore 0x000000011873793f QTimerInfoList::activateTimers() + 991 54 libqcocoa.dylib 0x00000001222a6032 0x122271000 + 217138 55 com.apple.CoreFoundation 0x00007fff3394a5e2 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17 56 com.apple.CoreFoundation 0x00007fff3394a581 __CFRunLoopDoSource0 + 103 57 com.apple.CoreFoundation 0x00007fff3394a39b __CFRunLoopDoSources0 + 209 58 com.apple.CoreFoundation 0x00007fff339490ca __CFRunLoopRun + 927 59 com.apple.CoreFoundation 0x00007fff339486ce CFRunLoopRunSpecific + 462 60 com.apple.HIToolbox 0x00007fff32574aad RunCurrentEventLoopInMode + 292 61 com.apple.HIToolbox 0x00007fff325747c5 ReceiveNextEventCommon + 584 62 com.apple.HIToolbox 0x00007fff32574569 _BlockUntilNextEventMatchingListInModeWithFilter + 64 63 com.apple.AppKit 0x00007fff30bbd659 _DPSNextEvent + 883 64 com.apple.AppKit 0x00007fff30bbbea0 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1352 65 com.apple.AppKit 0x00007fff30badbae -[NSApplication run] + 658 66 libqcocoa.dylib 0x00000001222a6de3 0x122271000 + 220643 67 QtCore 0x00000001186d993f QEventLoop::exec(QFlags) + 431 68 QtCore 0x00000001186de932 QCoreApplication::exec() + 130 69 QtWidgets.so 0x000000011534e7d2 meth_QApplication_exec_(_object*, _object*) + 82 70 org.python.python 0x000000010e76d382 _PyMethodDef_RawFastCallKeywords + 226 71 org.python.python 0x000000010e76c8b9 _PyCFunction_FastCallKeywords + 41 72 org.python.python 0x000000010e841b60 call_function + 656 73 org.python.python 0x000000010e83e817 _PyEval_EvalFrameDefault + 26567 74 org.python.python 0x000000010e76cd61 function_code_fastcall + 177 75 org.python.python 0x000000010e841bd4 call_function + 772 76 org.python.python 0x000000010e83e817 _PyEval_EvalFrameDefault + 26567 77 org.python.python 0x000000010e842a2c _PyEval_EvalCodeWithName + 3276 78 org.python.python 0x000000010e76c879 _PyFunction_FastCallKeywords + 217 79 org.python.python 0x000000010e841bd4 call_function + 772 80 org.python.python 0x000000010e83e8ae _PyEval_EvalFrameDefault + 26718 81 org.python.python 0x000000010e842a2c _PyEval_EvalCodeWithName + 3276 82 org.python.python 0x000000010e837fb0 PyEval_EvalCode + 48 83 org.python.python 0x000000010e835547 builtin_exec + 583 84 org.python.python 0x000000010e76d52d _PyMethodDef_RawFastCallKeywords + 653 85 org.python.python 0x000000010e76c8b9 _PyCFunction_FastCallKeywords + 41 86 org.python.python 0x000000010e841b60 call_function + 656 87 org.python.python 0x000000010e83e8ae _PyEval_EvalFrameDefault + 26718 88 org.python.python 0x000000010e842a2c _PyEval_EvalCodeWithName + 3276 89 org.python.python 0x000000010e76c879 _PyFunction_FastCallKeywords + 217 90 org.python.python 0x000000010e841bd4 call_function + 772 91 org.python.python 0x000000010e83e8ae _PyEval_EvalFrameDefault + 26718 92 org.python.python 0x000000010e842a2c _PyEval_EvalCodeWithName + 3276 93 org.python.python 0x000000010e76c377 _PyFunction_FastCallDict + 455 94 org.python.python 0x000000010e89caf3 pymain_run_module + 147 95 org.python.python 0x000000010e89bbdc pymain_main + 5900 96 org.python.python 0x000000010e89a4c3 Py_Main + 51 97 edu.ucsf.cgl.ChimeraX 0x000000010e73edc8 main + 120 98 libdyld.dylib 0x00007fff6da12cc9 start + 1 Thread 1: 0 libsystem_kernel.dylib 0x00007fff6db53f02 swtch_pri + 10 1 libsystem_pthread.dylib 0x00007fff6dc14698 sched_yield + 11 2 libopenblasp-r0.3.7.dylib 0x000000011005bc05 blas_thread_server + 565 3 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 4 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 2:: com.apple.NSEventThread 0 libsystem_kernel.dylib 0x00007fff6db53dfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff6db54170 mach_msg + 60 2 com.apple.CoreFoundation 0x00007fff3394a785 __CFRunLoopServiceMachPort + 247 3 com.apple.CoreFoundation 0x00007fff33949252 __CFRunLoopRun + 1319 4 com.apple.CoreFoundation 0x00007fff339486ce CFRunLoopRunSpecific + 462 5 com.apple.AppKit 0x00007fff30d5eea4 _NSEventThread + 132 6 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 7 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 3:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff6db53dfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff6db54170 mach_msg + 60 2 QtWebEngineCore 0x000000011ce7332d 0x11acd1000 + 35267373 3 QtWebEngineCore 0x000000011ce7322f 0x11acd1000 + 35267119 4 QtWebEngineCore 0x000000011ce2705d 0x11acd1000 + 34955357 5 QtWebEngineCore 0x000000011ce50085 0x11acd1000 + 35123333 6 QtWebEngineCore 0x000000011cea29bc 0x11acd1000 + 35461564 7 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 8 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 4:: DnsConfigService 0 libsystem_kernel.dylib 0x00007fff6db58766 kevent + 10 1 QtWebEngineCore 0x000000011d1349a9 0x11acd1000 + 38156713 2 QtWebEngineCore 0x000000011d131cbd 0x11acd1000 + 38145213 3 QtWebEngineCore 0x000000011cee8cdc 0x11acd1000 + 35749084 4 QtWebEngineCore 0x000000011ce50085 0x11acd1000 + 35123333 5 QtWebEngineCore 0x000000011cea29bc 0x11acd1000 + 35461564 6 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 7 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 8 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 5:: TaskSchedulerServiceThread 0 libsystem_kernel.dylib 0x00007fff6db58766 kevent + 10 1 QtWebEngineCore 0x000000011d1349a9 0x11acd1000 + 38156713 2 QtWebEngineCore 0x000000011d131cbd 0x11acd1000 + 38145213 3 QtWebEngineCore 0x000000011cee8cc4 0x11acd1000 + 35749060 4 QtWebEngineCore 0x000000011ce50085 0x11acd1000 + 35123333 5 QtWebEngineCore 0x000000011ce91a74 0x11acd1000 + 35392116 6 QtWebEngineCore 0x000000011cea29bc 0x11acd1000 + 35461564 7 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 8 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 6:: TaskSchedulerForegroundWorker 0 libsystem_kernel.dylib 0x00007fff6db53dfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff6db54170 mach_msg + 60 2 QtWebEngineCore 0x000000011ce7332d 0x11acd1000 + 35267373 3 QtWebEngineCore 0x000000011ce73421 0x11acd1000 + 35267617 4 QtWebEngineCore 0x000000011ce8ad28 0x11acd1000 + 35364136 5 QtWebEngineCore 0x000000011ce8b65b 0x11acd1000 + 35366491 6 QtWebEngineCore 0x000000011ce8b2c4 0x11acd1000 + 35365572 7 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 8 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 7:: TaskSchedulerForegroundBlockingWorker 0 libsystem_kernel.dylib 0x00007fff6db53dfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff6db54170 mach_msg + 60 2 QtWebEngineCore 0x000000011ce7332d 0x11acd1000 + 35267373 3 QtWebEngineCore 0x000000011ce73421 0x11acd1000 + 35267617 4 QtWebEngineCore 0x000000011ce8ad28 0x11acd1000 + 35364136 5 QtWebEngineCore 0x000000011ce8b65b 0x11acd1000 + 35366491 6 QtWebEngineCore 0x000000011ce8b2c4 0x11acd1000 + 35365572 7 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 8 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 8:: TaskSchedulerBackgroundWorker 0 libsystem_kernel.dylib 0x00007fff6db53dfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff6db54170 mach_msg + 60 2 QtWebEngineCore 0x000000011ce7332d 0x11acd1000 + 35267373 3 QtWebEngineCore 0x000000011ce73421 0x11acd1000 + 35267617 4 QtWebEngineCore 0x000000011ce8ad28 0x11acd1000 + 35364136 5 QtWebEngineCore 0x000000011ce8b65b 0x11acd1000 + 35366491 6 QtWebEngineCore 0x000000011ce8b234 0x11acd1000 + 35365428 7 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 8 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 9:: TaskSchedulerBackgroundBlockingWorker 0 libsystem_kernel.dylib 0x00007fff6db53dfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff6db54170 mach_msg + 60 2 QtWebEngineCore 0x000000011ce7332d 0x11acd1000 + 35267373 3 QtWebEngineCore 0x000000011ce73421 0x11acd1000 + 35267617 4 QtWebEngineCore 0x000000011ce8ad28 0x11acd1000 + 35364136 5 QtWebEngineCore 0x000000011ce8b65b 0x11acd1000 + 35366491 6 QtWebEngineCore 0x000000011ce8b234 0x11acd1000 + 35365428 7 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 8 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 10:: Chrome_IOThread 0 libsystem_kernel.dylib 0x00007fff6db58766 kevent + 10 1 QtWebEngineCore 0x000000011d1349a9 0x11acd1000 + 38156713 2 QtWebEngineCore 0x000000011d131cbd 0x11acd1000 + 38145213 3 QtWebEngineCore 0x000000011cee8cc4 0x11acd1000 + 35749060 4 QtWebEngineCore 0x000000011ce50085 0x11acd1000 + 35123333 5 QtWebEngineCore 0x000000011c7befe4 0x11acd1000 + 28237796 6 QtWebEngineCore 0x000000011cea29bc 0x11acd1000 + 35461564 7 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 8 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 11:: TaskSchedulerSingleThreadSharedBackgroundBlocking0 0 libsystem_kernel.dylib 0x00007fff6db53dfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff6db54170 mach_msg + 60 2 QtWebEngineCore 0x000000011ce7332d 0x11acd1000 + 35267373 3 QtWebEngineCore 0x000000011ce7322f 0x11acd1000 + 35267119 4 QtWebEngineCore 0x000000011ce8ad1a 0x11acd1000 + 35364122 5 QtWebEngineCore 0x000000011ce8b3bf 0x11acd1000 + 35365823 6 QtWebEngineCore 0x000000011ce8b264 0x11acd1000 + 35365476 7 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 8 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 12:: CompositorTileWorker1/72963 0 libsystem_kernel.dylib 0x00007fff6db56882 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff6dc17425 _pthread_cond_wait + 698 2 QtWebEngineCore 0x000000011cee0fa8 0x11acd1000 + 35717032 3 QtWebEngineCore 0x000000011de674c8 0x11acd1000 + 51995848 4 QtWebEngineCore 0x000000011cea1694 0x11acd1000 + 35456660 5 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 6 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 7 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 13:: AudioThread 0 libsystem_kernel.dylib 0x00007fff6db53dfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff6db54170 mach_msg + 60 2 QtWebEngineCore 0x000000011ce7332d 0x11acd1000 + 35267373 3 QtWebEngineCore 0x000000011ce7322f 0x11acd1000 + 35267119 4 QtWebEngineCore 0x000000011ce2705d 0x11acd1000 + 34955357 5 QtWebEngineCore 0x000000011ce50085 0x11acd1000 + 35123333 6 QtWebEngineCore 0x000000011cea29bc 0x11acd1000 + 35461564 7 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 8 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 14:: Chrome_InProcGpuThread 0 libsystem_kernel.dylib 0x00007fff6db53dfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff6db54170 mach_msg + 60 2 QtWebEngineCore 0x000000011ce7332d 0x11acd1000 + 35267373 3 QtWebEngineCore 0x000000011ce27052 0x11acd1000 + 34955346 4 QtWebEngineCore 0x000000011ce50085 0x11acd1000 + 35123333 5 QtWebEngineCore 0x000000011cea29bc 0x11acd1000 + 35461564 6 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 7 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 8 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 15:: Chrome_ChildIOThread 0 libsystem_kernel.dylib 0x00007fff6db58766 kevent + 10 1 QtWebEngineCore 0x000000011d1349a9 0x11acd1000 + 38156713 2 QtWebEngineCore 0x000000011d131cbd 0x11acd1000 + 38145213 3 QtWebEngineCore 0x000000011cee8cdc 0x11acd1000 + 35749084 4 QtWebEngineCore 0x000000011ce50085 0x11acd1000 + 35123333 5 QtWebEngineCore 0x000000011cea29bc 0x11acd1000 + 35461564 6 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 7 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 8 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 16:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff6db53dfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff6db54170 mach_msg + 60 2 QtWebEngineCore 0x000000011ce7332d 0x11acd1000 + 35267373 3 QtWebEngineCore 0x000000011ce7322f 0x11acd1000 + 35267119 4 QtWebEngineCore 0x000000011ce2705d 0x11acd1000 + 34955357 5 QtWebEngineCore 0x000000011ce50085 0x11acd1000 + 35123333 6 QtWebEngineCore 0x000000011cea29bc 0x11acd1000 + 35461564 7 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 8 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 17:: TaskSchedulerSingleThreadForegroundBlocking1 0 libsystem_kernel.dylib 0x00007fff6db53dfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff6db54170 mach_msg + 60 2 QtWebEngineCore 0x000000011ce7332d 0x11acd1000 + 35267373 3 QtWebEngineCore 0x000000011ce7322f 0x11acd1000 + 35267119 4 QtWebEngineCore 0x000000011ce8ad1a 0x11acd1000 + 35364122 5 QtWebEngineCore 0x000000011ce8b65b 0x11acd1000 + 35366491 6 QtWebEngineCore 0x000000011ce8b324 0x11acd1000 + 35365668 7 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 8 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 18:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff6db53dfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff6db54170 mach_msg + 60 2 QtWebEngineCore 0x000000011ce7332d 0x11acd1000 + 35267373 3 QtWebEngineCore 0x000000011ce7322f 0x11acd1000 + 35267119 4 QtWebEngineCore 0x000000011ce2705d 0x11acd1000 + 34955357 5 QtWebEngineCore 0x000000011ce50085 0x11acd1000 + 35123333 6 QtWebEngineCore 0x000000011cea29bc 0x11acd1000 + 35461564 7 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 8 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 19:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff6db53dfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff6db54170 mach_msg + 60 2 QtWebEngineCore 0x000000011ce7332d 0x11acd1000 + 35267373 3 QtWebEngineCore 0x000000011ce7322f 0x11acd1000 + 35267119 4 QtWebEngineCore 0x000000011ce2705d 0x11acd1000 + 34955357 5 QtWebEngineCore 0x000000011ce50085 0x11acd1000 + 35123333 6 QtWebEngineCore 0x000000011cea29bc 0x11acd1000 + 35461564 7 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 8 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 20: 0 libsystem_pthread.dylib 0x00007fff6dc12b68 start_wqthread + 0 Thread 21: 0 libsystem_pthread.dylib 0x00007fff6dc12b68 start_wqthread + 0 Thread 22:: TaskSchedulerForegroundWorker 0 libsystem_kernel.dylib 0x00007fff6db53dfa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff6db54170 mach_msg + 60 2 QtWebEngineCore 0x000000011ce7332d 0x11acd1000 + 35267373 3 QtWebEngineCore 0x000000011ce73421 0x11acd1000 + 35267617 4 QtWebEngineCore 0x000000011ce8ad28 0x11acd1000 + 35364136 5 QtWebEngineCore 0x000000011ce8b3bf 0x11acd1000 + 35365823 6 QtWebEngineCore 0x000000011ce8b2c4 0x11acd1000 + 35365572 7 QtWebEngineCore 0x000000011cee2717 0x11acd1000 + 35723031 8 libsystem_pthread.dylib 0x00007fff6dc17109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff6dc12b8b thread_start + 15 Thread 23: 0 libsystem_pthread.dylib 0x00007fff6dc12b68 start_wqthread + 0 Thread 24: 0 libsystem_pthread.dylib 0x00007fff6dc12b68 start_wqthread + 0 Thread 0 crashed with X86 Thread State (64-bit): rax: 0x0000000000000000 rbx: 0x00000001159a7dc0 rcx: 0x00007f91ade77a58 rdx: 0x0000000000000000 rdi: 0x0000000000000307 rsi: 0x0000000000000006 rbp: 0x00007f91ade77a80 rsp: 0x00007f91ade77a58 r8: 0x00007f91ade77f48 r9: 0x5c1ce1201cb1d2f1 r10: 0x00000001159a7dc0 r11: 0x0000000000000246 r12: 0x0000000000000307 r13: 0x00007f91b2db03f8 r14: 0x0000000000000006 r15: 0x0000000000000016 rip: 0x00007fff6db5a33a rfl: 0x0000000000000246 cr2: 0x000000010ec7a360 Logical CPU: 0 Error Code: 0x02000148 Trap Number: 133 Binary Images: 0x10e73e000 - 0x10e73eff3 +edu.ucsf.cgl.ChimeraX (1.1.1 - 1.1.1.0) /Applications/ChimeraX-1.1.1.app/Contents/MacOS/ChimeraX 0x10e749000 - 0x10e944fff +org.python.python (3.7.8, [c] 2001-2019 Python Software Foundation. - 3.7.8) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/Python 0x10ecb8000 - 0x10ecb9ff7 +_heapq.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_heapq.cpython-37m-darwin.so 0x10ed82000 - 0x10ed85ff3 +zlib.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/zlib.cpython-37m-darwin.so 0x10ed8f000 - 0x10eda3ff7 +libz.1.2.11.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/libz.1.2.11.dylib 0x10eded000 - 0x10edeeff7 +_bz2.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_bz2.cpython-37m-darwin.so 0x10edf7000 - 0x10edfafff +_lzma.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_lzma.cpython-37m-darwin.so 0x10ee05000 - 0x10ee05ffb +grp.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/grp.cpython-37m-darwin.so 0x10ee4d000 - 0x10ee52ffb +math.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/math.cpython-37m-darwin.so 0x10ee5e000 - 0x10ee60ff3 +_hashlib.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_hashlib.cpython-37m-darwin.so 0x10ee6a000 - 0x10eec7ff7 +libssl.1.1.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/libssl.1.1.dylib 0x10eef6000 - 0x10f0bdb13 +libcrypto.1.1.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/libcrypto.1.1.dylib 0x10f156000 - 0x10f15bff3 +_blake2.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_blake2.cpython-37m-darwin.so 0x10f165000 - 0x10f175ff7 +_sha3.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_sha3.cpython-37m-darwin.so 0x10f180000 - 0x10f180ffb +_bisect.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_bisect.cpython-37m-darwin.so 0x10f188000 - 0x10f189ffb +_random.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_random.cpython-37m-darwin.so 0x10f251000 - 0x10f257ffb +_json.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_json.cpython-37m-darwin.so 0x10f2a0000 - 0x10f2adff7 +_ssl.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_ssl.cpython-37m-darwin.so 0x10f2c3000 - 0x10f2ccffb +_socket.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_socket.cpython-37m-darwin.so 0x10f31e000 - 0x10f321fff +select.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/select.cpython-37m-darwin.so 0x10f32c000 - 0x10f330ffb +_struct.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_struct.cpython-37m-darwin.so 0x10f33e000 - 0x10f342ff7 +binascii.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/binascii.cpython-37m-darwin.so 0x10f44b000 - 0x10f459ff3 +_datetime.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_datetime.cpython-37m-darwin.so 0x10f4a9000 - 0x10f4a9ff3 +_scproxy.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_scproxy.cpython-37m-darwin.so 0x10f4b1000 - 0x10f4efff7 +_decimal.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_decimal.cpython-37m-darwin.so 0x10f553000 - 0x10f580ff3 +pyexpat.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/pyexpat.cpython-37m-darwin.so 0x10f598000 - 0x10f599ff3 +_queue.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_queue.cpython-37m-darwin.so 0x10f662000 - 0x10f663fff +_posixsubprocess.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_posixsubprocess.cpython-37m-darwin.so 0x10f6ab000 - 0x10f6bdfff +_pickle.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_pickle.cpython-37m-darwin.so 0x10f70e000 - 0x10f711ffb +_csv.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_csv.cpython-37m-darwin.so 0x10f89c000 - 0x10fbfffe7 +_multiarray_umath.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/core/_multiarray_umath.cpython-37m-darwin.so 0x10fd25000 - 0x113790ae7 +libopenblasp-r0.3.7.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/python3.7/site-packages/numpy/.dylibs/libopenblasp-r0.3.7.dylib 0x113a9a000 - 0x113bb1ff7 +libgfortran.3.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/python3.7/site-packages/numpy/.dylibs/libgfortran.3.dylib 0x113c1f000 - 0x113c55fff +libquadmath.0.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/python3.7/site-packages/numpy/.dylibs/libquadmath.0.dylib 0x113c69000 - 0x113c7eff7 +libgcc_s.1.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/python3.7/site-packages/numpy/.dylibs/libgcc_s.1.dylib 0x113e0e000 - 0x113e1bff3 +_multiarray_tests.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/core/_multiarray_tests.cpython-37m-darwin.so 0x113e31000 - 0x113e43ff7 +_ctypes.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_ctypes.cpython-37m-darwin.so 0x113eda000 - 0x113edbfff +lapack_lite.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/linalg/lapack_lite.cpython-37m-darwin.so 0x113ee3000 - 0x113efcffb +_umath_linalg.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/linalg/_umath_linalg.cpython-37m-darwin.so 0x113fd0000 - 0x113fe1ffb +_pocketfft_internal.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/fft/_pocketfft_internal.cpython-37m-darwin.so 0x11406a000 - 0x1140d5ffb +mtrand.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/random/mtrand.cpython-37m-darwin.so 0x114130000 - 0x11414dfff +_bit_generator.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/random/_bit_generator.cpython-37m-darwin.so 0x11416e000 - 0x11419dff3 +_common.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/random/_common.cpython-37m-darwin.so 0x1141b8000 - 0x11420cfff +_bounded_integers.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/random/_bounded_integers.cpython-37m-darwin.so 0x114234000 - 0x114246ffb +_mt19937.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/random/_mt19937.cpython-37m-darwin.so 0x114257000 - 0x114263ffb +_philox.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/random/_philox.cpython-37m-darwin.so 0x114273000 - 0x11427dfff +_pcg64.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/random/_pcg64.cpython-37m-darwin.so 0x11428d000 - 0x114294ff3 +_sfc64.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/random/_sfc64.cpython-37m-darwin.so 0x1142a3000 - 0x114325fff +_generator.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/random/_generator.cpython-37m-darwin.so 0x114485000 - 0x114486ff7 +_appdirs.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/core/_appdirs.so 0x11448e000 - 0x11448fffb +libappdirs.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/libappdirs.dylib 0x114497000 - 0x1144b8ffb +_serialize.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/core/_serialize.cpython-37m-darwin.so 0x1144d8000 - 0x1144f0ffb +_cmsgpack.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/msgpack/_cmsgpack.cpython-37m-darwin.so 0x114549000 - 0x1145a4ff7 +_imaging.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PIL/_imaging.cpython-37m-darwin.so 0x1145d3000 - 0x11460bff3 +libjpeg.9.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/python3.7/site-packages/PIL/.dylibs/libjpeg.9.dylib 0x114621000 - 0x114697ffb +libopenjp2.2.3.1.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/python3.7/site-packages/PIL/.dylibs/libopenjp2.2.3.1.dylib 0x1146a8000 - 0x1146c3ff7 +libz.1.2.11.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/python3.7/site-packages/PIL/.dylibs/libz.1.2.11.dylib 0x1146cd000 - 0x11475cfff +libtiff.5.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/python3.7/site-packages/PIL/.dylibs/libtiff.5.dylib 0x114775000 - 0x11478eff7 +libxcb.1.dylib (3) /Applications/ChimeraX-1.1.1.app/Contents/lib/python3.7/site-packages/PIL/.dylibs/libxcb.1.dylib 0x1147a5000 - 0x1147d6ffb +liblzma.5.dylib (0) /Applications/ChimeraX-1.1.1.app/Contents/lib/python3.7/site-packages/PIL/.dylibs/liblzma.5.dylib 0x1147e3000 - 0x1147e4fff +libXau.6.dylib (7) /Applications/ChimeraX-1.1.1.app/Contents/lib/python3.7/site-packages/PIL/.dylibs/libXau.6.dylib 0x1147ec000 - 0x1147effff +libXdmcp.6.dylib (7) /Applications/ChimeraX-1.1.1.app/Contents/lib/python3.7/site-packages/PIL/.dylibs/libXdmcp.6.dylib 0x1147f7000 - 0x11480fffb +tinyarray.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/tinyarray.cpython-37m-darwin.so 0x11492c000 - 0x114934fff +errorchecker.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyOpenGL_accelerate-3.1.5-py3.7-macosx-10.13-x86_64.egg/OpenGL_accelerate/errorchecker.cpython-37m-darwin.so 0x114983000 - 0x1149aeffb +arraydatatype.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyOpenGL_accelerate-3.1.5-py3.7-macosx-10.13-x86_64.egg/OpenGL_accelerate/arraydatatype.cpython-37m-darwin.so 0x1149d2000 - 0x114a04fff +wrapper.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyOpenGL_accelerate-3.1.5-py3.7-macosx-10.13-x86_64.egg/OpenGL_accelerate/wrapper.cpython-37m-darwin.so 0x114a2d000 - 0x114a36ff7 +formathandler.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyOpenGL_accelerate-3.1.5-py3.7-macosx-10.13-x86_64.egg/OpenGL_accelerate/formathandler.cpython-37m-darwin.so 0x114a46000 - 0x114a4dff3 +latebind.cpython-37m-darwin.so (0) /Applications/ChimeraX-1.1.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyOpenGL_accelerate-3.1.5-py3.7-macosx-10.13-x86_64.egg/OpenGL_accelerate/latebind.cpython-37m-darwin.so 0x114e1c000 - 0x114e35ffb +vbo.cpython-37m-darwin.so (0) 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0x7fff6b7c0000 - 0x7fff6b7c5fff libgermantok.dylib (24) /usr/lib/libgermantok.dylib 0x7fff6b7c6000 - 0x7fff6b7cfff7 libheimdal-asn1.dylib (564.140.7) /usr/lib/libheimdal-asn1.dylib 0x7fff6b7d0000 - 0x7fff6b8c0fff libiconv.2.dylib (59) /usr/lib/libiconv.2.dylib 0x7fff6b8c1000 - 0x7fff6bb18fff libicucore.A.dylib (64260.0.1) /usr/lib/libicucore.A.dylib 0x7fff6bb32000 - 0x7fff6bb33fff liblangid.dylib (133) /usr/lib/liblangid.dylib 0x7fff6bb34000 - 0x7fff6bb4cff3 liblzma.5.dylib (16) /usr/lib/liblzma.5.dylib 0x7fff6bb64000 - 0x7fff6bc0bff7 libmecab.dylib (883.11) /usr/lib/libmecab.dylib 0x7fff6bc0c000 - 0x7fff6be6eff1 libmecabra.dylib (883.11) /usr/lib/libmecabra.dylib 0x7fff6c1db000 - 0x7fff6c20afff libncurses.5.4.dylib (57) /usr/lib/libncurses.5.4.dylib 0x7fff6c33a000 - 0x7fff6c7b6ff5 libnetwork.dylib (1880.120.4) /usr/lib/libnetwork.dylib 0x7fff6c7b7000 - 0x7fff6c7cefff libnetworkextension.dylib (1095.140.2) /usr/lib/libnetworkextension.dylib 0x7fff6c857000 - 0x7fff6c88afde libobjc.A.dylib (787.1) /usr/lib/libobjc.A.dylib 0x7fff6c89d000 - 0x7fff6c8a1fff libpam.2.dylib (25.100.1) /usr/lib/libpam.2.dylib 0x7fff6c8a4000 - 0x7fff6c8dafff libpcap.A.dylib (89.120.2) /usr/lib/libpcap.A.dylib 0x7fff6c91a000 - 0x7fff6c928ff9 libperfcheck.dylib (37.100.2) /usr/lib/libperfcheck.dylib 0x7fff6c95e000 - 0x7fff6c976fff libresolv.9.dylib (67.40.1) /usr/lib/libresolv.9.dylib 0x7fff6c978000 - 0x7fff6c9bcff7 libsandbox.1.dylib (1217.141.6) /usr/lib/libsandbox.1.dylib 0x7fff6c9d0000 - 0x7fff6c9d1ff7 libspindump.dylib (281.3) /usr/lib/libspindump.dylib 0x7fff6c9d2000 - 0x7fff6cbbcff7 libsqlite3.dylib (308.6) /usr/lib/libsqlite3.dylib 0x7fff6cdb2000 - 0x7fff6ce0cff8 libusrtcp.dylib (1880.120.4) /usr/lib/libusrtcp.dylib 0x7fff6ce0d000 - 0x7fff6ce10ffb libutil.dylib (57) /usr/lib/libutil.dylib 0x7fff6ce11000 - 0x7fff6ce1eff7 libxar.1.dylib (425.5) /usr/lib/libxar.1.dylib 0x7fff6ce24000 - 0x7fff6cf06fff libxml2.2.dylib (33.9) /usr/lib/libxml2.2.dylib 0x7fff6cf0a000 - 0x7fff6cf32fff libxslt.1.dylib (16.12) /usr/lib/libxslt.1.dylib 0x7fff6cf33000 - 0x7fff6cf45ff3 libz.1.dylib (76) /usr/lib/libz.1.dylib 0x7fff6d7f4000 - 0x7fff6d7f9ff3 libcache.dylib (83) /usr/lib/system/libcache.dylib 0x7fff6d7fa000 - 0x7fff6d805fff libcommonCrypto.dylib (60165.120.1) /usr/lib/system/libcommonCrypto.dylib 0x7fff6d806000 - 0x7fff6d80dfff libcompiler_rt.dylib (101.2) /usr/lib/system/libcompiler_rt.dylib 0x7fff6d80e000 - 0x7fff6d817ff7 libcopyfile.dylib (166.40.1) /usr/lib/system/libcopyfile.dylib 0x7fff6d818000 - 0x7fff6d8aafdb libcorecrypto.dylib (866.140.2) /usr/lib/system/libcorecrypto.dylib 0x7fff6d9b7000 - 0x7fff6d9f7ff0 libdispatch.dylib (1173.100.2) /usr/lib/system/libdispatch.dylib 0x7fff6d9f8000 - 0x7fff6da2efff libdyld.dylib (750.7) /usr/lib/system/libdyld.dylib 0x7fff6da2f000 - 0x7fff6da2fffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib 0x7fff6da30000 - 0x7fff6da3cff3 libkxld.dylib (6153.141.43) /usr/lib/system/libkxld.dylib 0x7fff6da3d000 - 0x7fff6da3dff7 liblaunch.dylib (1738.140.3) /usr/lib/system/liblaunch.dylib 0x7fff6da3e000 - 0x7fff6da43ff7 libmacho.dylib (959.0.1) /usr/lib/system/libmacho.dylib 0x7fff6da44000 - 0x7fff6da46ff3 libquarantine.dylib (110.40.3) /usr/lib/system/libquarantine.dylib 0x7fff6da47000 - 0x7fff6da48ff7 libremovefile.dylib (48) /usr/lib/system/libremovefile.dylib 0x7fff6da49000 - 0x7fff6da60ff3 libsystem_asl.dylib (377.60.2) /usr/lib/system/libsystem_asl.dylib 0x7fff6da61000 - 0x7fff6da61ff7 libsystem_blocks.dylib (74) /usr/lib/system/libsystem_blocks.dylib 0x7fff6da62000 - 0x7fff6dae9fff libsystem_c.dylib (1353.100.4) /usr/lib/system/libsystem_c.dylib 0x7fff6daea000 - 0x7fff6daedffb libsystem_configuration.dylib (1061.141.2) /usr/lib/system/libsystem_configuration.dylib 0x7fff6daee000 - 0x7fff6daf1fff libsystem_coreservices.dylib (114.1) /usr/lib/system/libsystem_coreservices.dylib 0x7fff6daf2000 - 0x7fff6dafafff libsystem_darwin.dylib (1353.100.4) /usr/lib/system/libsystem_darwin.dylib 0x7fff6dafb000 - 0x7fff6db02fff libsystem_dnssd.dylib (1096.100.3) /usr/lib/system/libsystem_dnssd.dylib 0x7fff6db03000 - 0x7fff6db04ffb libsystem_featureflags.dylib (17) /usr/lib/system/libsystem_featureflags.dylib 0x7fff6db05000 - 0x7fff6db52ff7 libsystem_info.dylib (538) /usr/lib/system/libsystem_info.dylib 0x7fff6db53000 - 0x7fff6db7fff7 libsystem_kernel.dylib (6153.141.43) /usr/lib/system/libsystem_kernel.dylib 0x7fff6db80000 - 0x7fff6dbc7fff libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib 0x7fff6dbc8000 - 0x7fff6dbeffff libsystem_malloc.dylib (283.100.6) /usr/lib/system/libsystem_malloc.dylib 0x7fff6dbf0000 - 0x7fff6dbfdffb libsystem_networkextension.dylib (1095.140.2) /usr/lib/system/libsystem_networkextension.dylib 0x7fff6dbfe000 - 0x7fff6dc07ff7 libsystem_notify.dylib (241.100.2) /usr/lib/system/libsystem_notify.dylib 0x7fff6dc08000 - 0x7fff6dc10fef libsystem_platform.dylib (220.100.1) /usr/lib/system/libsystem_platform.dylib 0x7fff6dc11000 - 0x7fff6dc1bfff libsystem_pthread.dylib (416.100.3) /usr/lib/system/libsystem_pthread.dylib 0x7fff6dc1c000 - 0x7fff6dc20ff3 libsystem_sandbox.dylib (1217.141.6) /usr/lib/system/libsystem_sandbox.dylib 0x7fff6dc21000 - 0x7fff6dc23fff libsystem_secinit.dylib (62.100.2) /usr/lib/system/libsystem_secinit.dylib 0x7fff6dc24000 - 0x7fff6dc2bffb libsystem_symptoms.dylib (1238.120.2) /usr/lib/system/libsystem_symptoms.dylib 0x7fff6dc2c000 - 0x7fff6dc42ff2 libsystem_trace.dylib (1147.120.1) /usr/lib/system/libsystem_trace.dylib 0x7fff6dc44000 - 0x7fff6dc49ff7 libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib 0x7fff6dc4a000 - 0x7fff6dc7fffe libxpc.dylib (1738.140.3) /usr/lib/system/libxpc.dylib External Modification Summary: Calls made by other processes targeting this process: task_for_pid: 86 thread_create: 0 thread_set_state: 0 Calls made by this process: task_for_pid: 0 thread_create: 0 thread_set_state: 0 Calls made by all processes on this machine: task_for_pid: 1262176 thread_create: 0 thread_set_state: 0 VM Region Summary: ReadOnly portion of Libraries: Total=897.5M resident=0K(0%) swapped_out_or_unallocated=897.5M(100%) Writable regions: Total=1.0G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.0G(100%) VIRTUAL REGION REGION TYPE SIZE COUNT (non-coalesced) =========== ======= ======= Accelerate framework 512K 4 Activity Tracing 256K 1 CG backing stores 2228K 5 CG image 124K 16 CoreAnimation 220K 36 CoreGraphics 8K 1 CoreImage 48K 7 CoreUI image data 2268K 28 Foundation 4K 1 Kernel Alloc Once 8K 1 MALLOC 325.9M 346 MALLOC guard page 32K 7 MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated) MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated) OpenGL GLSL 512K 6 PROTECTED_MEMORY 4K 1 STACK GUARD 96K 24 Stack 155.2M 25 Stack Guard 56.0M 1 VM_ALLOCATE 159.7M 448 __DATA 49.1M 530 __DATA_CONST 40K 4 __FONT_DATA 4K 1 __GLSLBUILTINS 5176K 1 __LINKEDIT 412.1M 134 __OBJC_RO 32.3M 1 __OBJC_RW 1908K 2 __TEXT 485.4M 491 __UNICODE 564K 1 mapped file 85.4M 48 shared memory 652K 18 =========== ======= ======= TOTAL 2.1G 2191 TOTAL, minus reserved VM space 1.7G 2191 Log: UCSF ChimeraX version: 1.1.1 (2020-10-07) © 2016-2020 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open > /Users/karinwallden/Downloads/cryosparc_P16_J30_class_01_00082_volume.mrc Opened cryosparc_P16_J30_class_01_00082_volume.mrc, grid size 128,128,128, pixel 4.31, shown at level 0.0658, step 1, values float32 OpenGL version: 4.1 INTEL-14.7.20 OpenGL renderer: Intel(R) Iris(TM) Graphics 6100 OpenGL vendor: Intel Inc.Hardware: Hardware Overview: Model Name: MacBook Pro Model Identifier: MacBookPro12,1 Processor Name: Dual-Core Intel Core i7 Processor Speed: 3.1 GHz Number of Processors: 1 Total Number of Cores: 2 L2 Cache (per Core): 256 KB L3 Cache: 4 MB Hyper-Threading Technology: Enabled Memory: 16 GB Boot ROM Version: 428.40.10.0.0 SMC Version (system): 2.28f7 Software: System Software Overview: System Version: macOS 10.15.7 (19H1519) Kernel Version: Darwin 19.6.0 Time since boot: 22 days 22:23 Graphics/Displays: Intel Iris Graphics 6100: Chipset Model: Intel Iris Graphics 6100 Type: GPU Bus: Built-In VRAM (Dynamic, Max): 1536 MB Vendor: Intel Device ID: 0x162b Revision ID: 0x0009 Metal: Supported, feature set macOS GPUFamily1 v4 Displays: Color LCD: Display Type: Built-In Retina LCD Resolution: 2560 x 1600 Retina Framebuffer Depth: 24-Bit Color (ARGB8888) Mirror: Off Online: Yes Automatically Adjust Brightness: No Connection Type: Internal VG278: Resolution: 1920 x 1080 (1080p FHD - Full High Definition) UI Looks like: 1920 x 1080 @ 60 Hz Framebuffer Depth: 24-Bit Color (ARGB8888) Display Serial Number: L6LMQS142045 Main Display: Yes Mirror: Off Online: Yes Rotation: Supported Automatically Adjust Brightness: No Connection Type: Thunderbolt/DisplayPort PyQt version: 5.12.3 Compiled Qt version: 5.12.4 Runtime Qt version: 5.12.9 Installed Packages: alabaster: 0.7.12 appdirs: 1.4.4 appnope: 0.1.0 Babel: 2.8.0 backcall: 0.2.0 blockdiag: 2.0.1 certifi: 2020.6.20 chardet: 3.0.4 ChimeraX-AddH: 2.1.3 ChimeraX-AlignmentAlgorithms: 2.0 ChimeraX-AlignmentHdrs: 3.2 ChimeraX-AlignmentMatrices: 2.0 ChimeraX-Alignments: 2.1 ChimeraX-Arrays: 1.0 ChimeraX-Atomic: 1.6.1 ChimeraX-AtomSearch: 2.0 ChimeraX-AxesPlanes: 2.0 ChimeraX-BasicActions: 1.1 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 1.0.1 ChimeraX-BondRot: 2.0 ChimeraX-BugReporter: 1.0 ChimeraX-BuildStructure: 2.0 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.0 ChimeraX-ButtonPanel: 1.0 ChimeraX-CageBuilder: 1.0 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.1 ChimeraX-ChemGroup: 2.0 ChimeraX-Clashes: 2.0 ChimeraX-ColorActions: 1.0 ChimeraX-ColorGlobe: 1.0 ChimeraX-CommandLine: 1.1.3 ChimeraX-ConnectStructure: 2.0 ChimeraX-Contacts: 1.0 ChimeraX-Core: 1.1.1 ChimeraX-CoreFormats: 1.0 ChimeraX-coulombic: 1.0.1 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-DataFormats: 1.0 ChimeraX-Dicom: 1.0 ChimeraX-DistMonitor: 1.1 ChimeraX-DistUI: 1.0 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ExperimentalCommands: 1.0 ChimeraX-FileHistory: 1.0 ChimeraX-FunctionKey: 1.0 ChimeraX-Geometry: 1.1 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.0 ChimeraX-Hbonds: 2.0 ChimeraX-Help: 1.0 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.0 ChimeraX-ImageFormats: 1.0 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0 ChimeraX-Label: 1.0 ChimeraX-ListInfo: 1.0 ChimeraX-Log: 1.1.1 ChimeraX-LookingGlass: 1.1 ChimeraX-Map: 1.0.1 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0 ChimeraX-MapFilter: 2.0 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.0 ChimeraX-Markers: 1.0 ChimeraX-Mask: 1.0 ChimeraX-MatchMaker: 1.1 ChimeraX-MDcrds: 2.0 ChimeraX-MedicalToolbar: 1.0.1 ChimeraX-Meeting: 1.0 ChimeraX-MLP: 1.0 ChimeraX-mmCIF: 2.2 ChimeraX-MMTF: 2.0 ChimeraX-Modeller: 1.0 ChimeraX-ModelPanel: 1.0 ChimeraX-ModelSeries: 1.0 ChimeraX-Mol2: 2.0 ChimeraX-Morph: 1.0 ChimeraX-MouseModes: 1.0 ChimeraX-Movie: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nucleotides: 2.0 ChimeraX-OpenCommand: 1.2.1 ChimeraX-PDB: 2.1 ChimeraX-PDBBio: 1.0 ChimeraX-PickBlobs: 1.0 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.0 ChimeraX-PubChem: 2.0 ChimeraX-Read-Pbonds: 1.0 ChimeraX-Registration: 1.1 ChimeraX-RemoteControl: 1.0 ChimeraX-ResidueFit: 1.0 ChimeraX-RestServer: 1.0 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 2.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.2 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0 ChimeraX-SeqView: 2.2 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0 ChimeraX-Shortcuts: 1.0 ChimeraX-ShowAttr: 1.0 ChimeraX-ShowSequences: 1.0 ChimeraX-SideView: 1.0 ChimeraX-Smiles: 2.0 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.0.4 ChimeraX-STL: 1.0 ChimeraX-Storm: 1.0 ChimeraX-Struts: 1.0 ChimeraX-Surface: 1.0 ChimeraX-SwapAA: 2.0 ChimeraX-SwapRes: 2.0 ChimeraX-TapeMeasure: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.0 ChimeraX-ToolshedUtils: 1.0 ChimeraX-Tug: 1.0 ChimeraX-UI: 1.2.3 ChimeraX-uniprot: 2.0 ChimeraX-ViewDockX: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0 ChimeraX-WebServices: 1.0 ChimeraX-Zone: 1.0 colorama: 0.4.3 comtypes: 1.1.7 cxservices: 1.0 cycler: 0.10.0 Cython: 0.29.20 decorator: 4.4.2 distlib: 0.3.1 docutils: 0.16 filelock: 3.0.12 funcparserlib: 0.3.6 grako: 3.16.5 h5py: 2.10.0 html2text: 2020.1.16 idna: 2.10 ihm: 0.16 imagecodecs: 2020.5.30 imagecodecs-lite: 2020.1.31 imagesize: 1.2.0 ipykernel: 5.3.0 ipython: 7.15.0 ipython-genutils: 0.2.0 jedi: 0.17.2 Jinja2: 2.11.2 jupyter-client: 6.1.3 jupyter-core: 4.6.3 kiwisolver: 1.2.0 line-profiler: 2.1.2 lxml: 4.5.1 MarkupSafe: 1.1.1 matplotlib: 3.2.1 msgpack: 1.0.0 netifaces: 0.10.9 networkx: 2.4 numexpr: 2.7.1 numpy: 1.18.5 numpydoc: 1.0.0 openvr: 1.12.501 packaging: 20.4 parso: 0.7.1 pexpect: 4.8.0 pickleshare: 0.7.5 Pillow: 7.1.2 pip: 20.2.2 pkginfo: 1.5.0.1 prompt-toolkit: 3.0.7 psutil: 5.7.0 ptyprocess: 0.6.0 pycollada: 0.7.1 pydicom: 2.0.0 Pygments: 2.6.1 PyOpenGL: 3.1.5 PyOpenGL-accelerate: 3.1.5 pyparsing: 2.4.7 PyQt5-commercial: 5.12.3 PyQt5-sip: 4.19.19 PyQtWebEngine-commercial: 5.12.1 python-dateutil: 2.8.1 pytz: 2020.1 pyzmq: 19.0.2 qtconsole: 4.7.4 QtPy: 1.9.0 RandomWords: 0.3.0 requests: 2.24.0 scipy: 1.4.1 setuptools: 49.4.0 sfftk-rw: 0.6.6.dev0 six: 1.15.0 snowballstemmer: 2.0.0 sortedcontainers: 2.2.2 Sphinx: 3.1.1 sphinxcontrib-applehelp: 1.0.2 sphinxcontrib-blockdiag: 2.0.0 sphinxcontrib-devhelp: 1.0.2 sphinxcontrib-htmlhelp: 1.0.3 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 1.0.3 sphinxcontrib-serializinghtml: 1.1.4 suds-jurko: 0.6 tables: 3.6.1 tifffile: 2020.6.3 tinyarray: 1.2.2 tornado: 6.0.4 traitlets: 5.0.4 urllib3: 1.25.10 wcwidth: 0.2.5 webcolors: 1.11.1 wheel: 0.34.2 }}} " defect closed normal Graphics nonchimerax all ChimeraX