Changes between Initial Version and Version 1 of Ticket #6670, comment 2


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Timestamp:
Apr 20, 2022, 11:05:11 PM (4 years ago)
Author:
Tom Goddard

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  • Ticket #6670, comment 2

    initial v1  
    11Made opening PAE matrix for a structure with a different number of residues fail.
    22
    3 This isn't the best solution.  It would be nicer if an AlphaFold model remembered it original residue indexes so that even if residues get deleted we can still use the PAE plots.
     3This isn't the best solution.  It would be nicer if an AlphaFold model remembered it original residue indexes so that even if residues get deleted we can still use the PAE plots.  I could add a residue attribute "alphafold_residue_index" when the alphafold command trims a structure.  But this would not fix the case when the user opens an AlphaFold model directly and deletes some residues.  Still may be worth handling the trim case.