id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
8796	Floating-point exception in glBufferSubData	endang-purba@…	Tom Goddard	"{{{
The following bug report has been submitted:
Platform:        macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.6rc202303292224 (2023-03-29 22:24:14 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Floating point exception

Current thread 0x00007ff851951680 (most recent call first):
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/OpenGL/GL/VERSION/GL_1_5.py"", line 125 in glBufferSubData
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/opengl.py"", line 2702 in update_buffer_data
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/drawing.py"", line 1903 in update_buffers
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/drawing.py"", line 1915 in activate_bindings
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/drawing.py"", line 802 in _draw_geometry
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/drawing.py"", line 775 in draw_self
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/drawing.py"", line 768 in draw
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/drawing.py"", line 1555 in _draw_multiple
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/drawing.py"", line 1542 in draw_opaque
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/view.py"", line 247 in _draw_scene
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/view.py"", line 177 in draw
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/updateloop.py"", line 73 in draw_new_frame
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/updateloop.py"", line 139 in _redraw_timer_callback
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py"", line 284 in event_loop
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py"", line 892 in init
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py"", line 1043 in 
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py"", line 87 in _run_code
  File ""/private/var/folders/1x/r90f8kvx3cjdfgw3j19byw100000gz/T/AppTranslocation/39D9E14F-B8B4-4B75-BEBF-E337AB07A578/d/ChimeraX-1.6-rc2023.03.29.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py"", line 197 in _run_module_as_main


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  ""procStartAbsTime"" : 142890005464241,
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  ""procName"" : ""ChimeraX"",
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    ""path"" : ""\/usr\/lib\/system\/libsystem_kernel.dylib"",
    ""name"" : ""libsystem_kernel.dylib""
  },
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    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 140703363555328,
    ""size"" : 49144,
    ""uuid"" : ""3bd433d4-15bd-3add-a612-95e4d3b20719"",
    ""path"" : ""\/usr\/lib\/system\/libsystem_pthread.dylib"",
    ""name"" : ""libsystem_pthread.dylib""
  },
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    ""source"" : ""P"",
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    ""size"" : 561152,
    ""uuid"" : ""1aec5d1a-6e43-30f9-a9f2-11eb85d3e70c"",
    ""path"" : ""\/usr\/lib\/system\/libsystem_c.dylib"",
    ""name"" : ""libsystem_c.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 140703363739648,
    ""size"" : 40952,
    ""uuid"" : ""04645919-7592-3a26-93b5-95663f983856"",
    ""path"" : ""\/usr\/lib\/system\/libsystem_platform.dylib"",
    ""name"" : ""libsystem_platform.dylib""
  },
  {
    ""size"" : 0,
    ""source"" : ""A"",
    ""base"" : 0,
    ""uuid"" : ""00000000-0000-0000-0000-000000000000""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64h"",
    ""base"" : 5284757504,
    ""CFBundleShortVersionString"" : ""4.9.51"",
    ""CFBundleIdentifier"" : ""com.apple.AMDRadeonX5000GLDriver"",
    ""size"" : 1507328,
    ""uuid"" : ""663bbaa6-aed5-3abb-aad7-d07fb3fa8bca"",
    ""path"" : ""\/System\/Library\/Extensions\/AMDRadeonX5000GLDriver.bundle\/Contents\/MacOS\/AMDRadeonX5000GLDriver"",
    ""name"" : ""AMDRadeonX5000GLDriver"",
    ""CFBundleVersion"" : ""4.0.9""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 140712315473920,
    ""size"" : 1613816,
    ""uuid"" : ""5659457d-2e03-3826-b003-c422b503973b"",
    ""path"" : ""\/System\/Library\/Frameworks\/OpenGL.framework\/Versions\/A\/Resources\/GLEngine.bundle\/GLEngine"",
    ""name"" : ""GLEngine""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 140703620833280,
    ""size"" : 24544,
    ""uuid"" : ""bb553223-8d2b-3662-a6db-739b0772fd89"",
    ""path"" : ""\/usr\/lib\/libffi.dylib"",
    ""name"" : ""libffi.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 5281185792,
    ""size"" : 147456,
    ""uuid"" : ""9a744198-7fb3-3c4f-b935-3646fa131615"",
    ""path"" : ""\/private\/var\/folders\/*\/ChimeraX-1.6-rc2023.03.29.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/numexpr\/interpreter.cpython-39-darwin.so"",
    ""name"" : ""interpreter.cpython-39-darwin.so""
  },
  {
    ""source"" : ""P"",
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    ""base"" : 5592911872,
    ""size"" : 174571520,
    ""uuid"" : ""473ca65c-6149-3bfa-a88b-95ac735bcd3b"",
    ""path"" : ""\/private\/var\/folders\/*\/ChimeraX-1.6-rc2023.03.29.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/PyQt6\/Qt6\/lib\/QtWebEngineCore.framework\/Versions\/A\/QtWebEngineCore"",
    ""name"" : ""QtWebEngineCore""
  },
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    ""source"" : ""P"",
    ""arch"" : ""x86_64h"",
    ""base"" : 140703363956736,
    ""CFBundleShortVersionString"" : ""6.9"",
    ""CFBundleIdentifier"" : ""com.apple.CoreFoundation"",
    ""size"" : 4825072,
    ""uuid"" : ""c2615780-0140-315c-a455-7e03bb22d3d6"",
    ""path"" : ""\/System\/Library\/Frameworks\/CoreFoundation.framework\/Versions\/A\/CoreFoundation"",
    ""name"" : ""CoreFoundation"",
    ""CFBundleVersion"" : ""1953.300""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 140703415926784,
    ""CFBundleShortVersionString"" : ""6.9"",
    ""CFBundleIdentifier"" : ""com.apple.AppKit"",
    ""size"" : 16814067,
    ""uuid"" : ""540cedfd-5a35-3f35-8953-dcb7c4834eb5"",
    ""path"" : ""\/System\/Library\/Frameworks\/AppKit.framework\/Versions\/C\/AppKit"",
    ""name"" : ""AppKit"",
    ""CFBundleVersion"" : ""2299.40.118""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4589965312,
    ""size"" : 64028672,
    ""uuid"" : ""24c9d5c5-4854-3af4-9550-cb0204044dfa"",
    ""path"" : ""\/private\/var\/folders\/*\/ChimeraX-1.6-rc2023.03.29.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/numpy\/.dylibs\/libopenblas64_.0.dylib"",
    ""name"" : ""libopenblas64_.0.dylib""
  }
],
  ""vmSummary"" : ""ReadOnly portion of Libraries: Total=1.1G resident=0K(0%) swapped_out_or_unallocated=1.1G(100%)\nWritable regions: Total=57.6G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=57.6G(100%)\n\n                                VIRTUAL   REGION \nREGION TYPE                        SIZE    COUNT (non-coalesced) \n===========                     =======  ======= \nAccelerate framework               128K        1 \nActivity Tracing                   256K        1 \nCG backing stores                 3840K        4 \nCG image                           104K        9 \nColorSync                          244K       28 \nCoreAnimation                       80K       11 \nCoreGraphics                        12K        2 \nCoreUI image data                 4020K       30 \nFoundation                          16K        1 \nIOKit                             7940K        1 \nKernel Alloc Once                    8K        1 \nMALLOC                            40.9G      524 \nMALLOC guard page                   48K        9 \nMALLOC_MEDIUM (reserved)           1.8G       17         reserved VM address space (unallocated)\nMALLOC_NANO (reserved)           128.0M        1         reserved VM address space (unallocated)\nMach message                        16K        2 \nOpenGL GLSL                        384K        4 \nSTACK GUARD                        184K       46 \nStack                            173.9M       47 \nStack Guard                       56.0M        1 \nVM_ALLOCATE                       14.1G      111 \nVM_ALLOCATE (reserved)           448.0M        1         reserved VM address space (unallocated)\n__CTF                               756        1 \n__DATA                            48.3M      788 \n__DATA_CONST                      51.6M      377 \n__DATA_DIRTY                      1817K      223 \n__FONT_DATA                        2352        1 \n__GLSLBUILTINS                    5174K        1 \n__LINKEDIT                       217.4M      185 \n__OBJC_RO                         65.5M        1 \n__OBJC_RW                         1989K        2 \n__TEXT                           922.0M      781 \ndyld private memory                288K        3 \nmapped file                      121.1M       54 \nshared memory                     2984K       26 \n===========                     =======  ======= \nTOTAL                             59.1G     3295 \nTOTAL, minus reserved VM space    56.7G     3295 \n"",
  ""legacyInfo"" : {
  ""threadTriggered"" : {
    ""name"" : ""CrBrowserMain"",
    ""queue"" : ""com.apple.main-thread""
  }
},
  ""trialInfo"" : {
  ""rollouts"" : [
    {
      ""rolloutId"" : ""5fb4245a1bbfe8005e33a1e1"",
      ""factorPackIds"" : {

      },
      ""deploymentId"" : 240000021
    },
    {
      ""rolloutId"" : ""60356660bbe37970735c5624"",
      ""factorPackIds"" : {

      },
      ""deploymentId"" : 240000027
    }
  ],
  ""experiments"" : [

  ]
},
  ""reportNotes"" : [
  ""dyld_process_snapshot_create_for_process failed with 5""
]
}
===== Log before crash start =====
UCSF ChimeraX version: 1.6rc202303292224 (2023-03-29)  
© 2016-2023 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open /Users/rina/Desktop/legen_trim.mrc format mrc

Opened legen_trim.mrc as #1, grid size 4612,3340,584, pixel 200,200,500, shown
at step 1, values int8  

> volume #1 region 0,0,0,4611,3339,583 step 16

> volume #1 step 4

> volume #1 change image level -95.99,0 level 124,0.8 level 127,1

> volume #1 step 1


===== Log before crash end =====

Log:
UCSF ChimeraX version: 1.6rc202303292224 (2023-03-29)  
© 2016-2023 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  




OpenGL version: 4.1 ATI-4.9.51
OpenGL renderer: AMD Radeon Pro Vega 64 OpenGL Engine
OpenGL vendor: ATI Technologies Inc.

Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.4.2, Qt 6.4.2
Qt runtime version: 6.4.3
Qt platform: cocoa
Hardware:

    Hardware Overview:

      Model Name: iMac Pro
      Model Identifier: iMacPro1,1
      Processor Name: 18-Core Intel Xeon W
      Processor Speed: 2.3 GHz
      Number of Processors: 1
      Total Number of Cores: 18
      L2 Cache (per Core): 1 MB
      L3 Cache: 24.8 MB
      Hyper-Threading Technology: Enabled
      Memory: 128 GB
      System Firmware Version: 1916.80.2.0.0 (iBridge: 20.16.3045.0.0,0)
      OS Loader Version: 564.40.4~66

Software:

    System Software Overview:

      System Version: macOS 13.2.1 (22D68)
      Kernel Version: Darwin 22.3.0
      Time since boot: 1 day, 15 hours, 45 minutes

Graphics/Displays:

    Radeon Pro Vega 64:

      Chipset Model: Radeon Pro Vega 64
      Type: GPU
      Bus: PCIe
      PCIe Lane Width: x16
      VRAM (Total): 16 GB
      Vendor: AMD (0x1002)
      Device ID: 0x6860
      Revision ID: 0x0000
      ROM Revision: 113-D0500D-114
      VBIOS Version: 113-D05001A1XT-018
      Option ROM Version: 113-D05001A1XT-018
      EFI Driver Version: 01.01.114
      Metal Support: Metal 3
      Displays:
        iMac:
          Display Type: Built-In Retina LCD
          Resolution: Retina 5K (5120 x 2880)
          Framebuffer Depth: 30-Bit Color (ARGB2101010)
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Automatically Adjust Brightness: Yes
          Connection Type: Internal


Installed Packages:
    alabaster: 0.7.13
    appdirs: 1.4.4
    appnope: 0.1.3
    asttokens: 2.2.1
    Babel: 2.12.1
    backcall: 0.2.0
    beautifulsoup4: 4.11.2
    blockdiag: 3.0.0
    build: 0.10.0
    certifi: 2021.10.8
    cftime: 1.6.2
    charset-normalizer: 3.1.0
    ChimeraX-AddCharge: 1.5.9
    ChimeraX-AddH: 2.2.4
    ChimeraX-AlignmentAlgorithms: 2.0.1
    ChimeraX-AlignmentHdrs: 3.3.1
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.9.3
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.3
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.1
    ChimeraX-ArtiaX: 0.3
    ChimeraX-Atomic: 1.43.10
    ChimeraX-AtomicLibrary: 10.0.6
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.3.2
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.1.2
    ChimeraX-BondRot: 2.0.1
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.8
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.2.2
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.3.2
    ChimeraX-ChangeChains: 1.0.2
    ChimeraX-CheckWaters: 1.3.1
    ChimeraX-ChemGroup: 2.0.1
    ChimeraX-Clashes: 2.2.4
    ChimeraX-ColorActions: 1.0.3
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.3
    ChimeraX-CommandLine: 1.2.5
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.6rc202303292224
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.4.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.3
    ChimeraX-Dicom: 1.2
    ChimeraX-DistMonitor: 1.4
    ChimeraX-DockPrep: 1.1.1
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1.1
    ChimeraX-Hbonds: 2.4
    ChimeraX-Help: 1.2.1
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-Label: 1.1.7
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.5
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.2
    ChimeraX-Map: 1.1.4
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.0.12
    ChimeraX-MDcrds: 2.6
    ChimeraX-MedicalToolbar: 1.0.2
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.12
    ChimeraX-MMTF: 2.2
    ChimeraX-Modeller: 1.5.9
    ChimeraX-ModelPanel: 1.3.7
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.0
    ChimeraX-NRRD: 1.0
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.10.1
    ChimeraX-PDB: 2.7
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.2
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.1
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 3.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.1
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.8.3
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.1.1
    ChimeraX-ShowSequences: 1.0.1
    ChimeraX-SideView: 1.0.1
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.10.2
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.1.2
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.2.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.2
    ChimeraX-ToolshedUtils: 1.2.1
    ChimeraX-Topography: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.28.4
    ChimeraX-uniprot: 2.2.2
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.2
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.1
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.1.3
    contourpy: 1.0.7
    cxservices: 1.2.2
    cycler: 0.11.0
    Cython: 0.29.33
    debugpy: 1.6.6
    decorator: 5.1.1
    docutils: 0.19
    executing: 1.2.0
    filelock: 3.9.0
    fonttools: 4.39.3
    funcparserlib: 1.0.1
    geomdl: 5.3.1
    grako: 3.16.5
    h5py: 3.8.0
    html2text: 2020.1.16
    idna: 3.4
    ihm: 0.35
    imagecodecs: 2022.2.22
    imagesize: 1.4.1
    importlib-metadata: 6.1.0
    ipykernel: 6.21.1
    ipython: 8.10.0
    ipython-genutils: 0.2.0
    ipywidgets: 8.0.6
    jedi: 0.18.2
    Jinja2: 3.1.2
    jupyter-client: 8.0.2
    jupyter-core: 5.3.0
    jupyterlab-widgets: 3.0.7
    kiwisolver: 1.4.4
    line-profiler: 4.0.2
    lxml: 4.9.2
    lz4: 4.3.2
    MarkupSafe: 2.1.2
    matplotlib: 3.6.3
    matplotlib-inline: 0.1.6
    msgpack: 1.0.4
    nest-asyncio: 1.5.6
    netCDF4: 1.6.2
    networkx: 2.8.8
    nibabel: 5.0.1
    nptyping: 2.5.0
    numexpr: 2.8.4
    numpy: 1.23.5
    openvr: 1.23.701
    packaging: 21.3
    pandas: 1.5.3
    ParmEd: 3.4.3
    parso: 0.8.3
    pep517: 0.13.0
    pexpect: 4.8.0
    pickleshare: 0.7.5
    Pillow: 9.3.0
    pip: 23.0
    pkginfo: 1.9.6
    platformdirs: 3.2.0
    prompt-toolkit: 3.0.38
    psutil: 5.9.4
    ptyprocess: 0.7.0
    pure-eval: 0.2.2
    pycollada: 0.7.2
    pydicom: 2.3.0
    Pygments: 2.14.0
    pynrrd: 1.0.0
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 3.0.9
    pyproject-hooks: 1.0.0
    PyQt6-commercial: 6.4.2
    PyQt6-Qt6: 6.4.3
    PyQt6-sip: 13.4.1
    PyQt6-WebEngine-commercial: 6.4.0
    PyQt6-WebEngine-Qt6: 6.4.3
    python-dateutil: 2.8.2
    pytz: 2023.3
    pyzmq: 25.0.2
    qtconsole: 5.4.0
    QtPy: 2.3.1
    RandomWords: 0.4.0
    requests: 2.28.2
    scipy: 1.9.3
    setuptools: 67.4.0
    setuptools-scm: 7.0.5
    sfftk-rw: 0.7.3
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    soupsieve: 2.4
    sphinx: 6.1.3
    sphinx-autodoc-typehints: 1.22
    sphinxcontrib-applehelp: 1.0.4
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.1
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    stack-data: 0.6.2
    starfile: 0.4.11
    superqt: 0.4.1
    tables: 3.7.0
    tcia-utils: 1.2.0
    tifffile: 2022.10.10
    tinyarray: 1.2.4
    tomli: 2.0.1
    tornado: 6.2
    traitlets: 5.9.0
    typing-extensions: 4.5.0
    urllib3: 1.26.15
    wcwidth: 0.2.6
    webcolors: 1.12
    wheel: 0.38.4
    wheel-filename: 1.4.1
    widgetsnbextension: 4.0.7
    zipp: 3.15.0

}}}
"	defect	closed	normal		Graphics		nonchimerax						all	ChimeraX