| | 1 | = Attendees = |
| | 2 | |
| | 3 | * Conrad, Elaine, Eric, Scooter, TomG, TomF |
| | 4 | |
| | 5 | = Agenda = |
| | 6 | * Review action items from 8/10 meeting |
| | 7 | * ChimeraX paper |
| | 8 | * Yet another new bundle building change |
| | 9 | * Sessions: msgpack vs pickle |
| | 10 | * Chimera 1 fetching vs SSL certificate on Windows |
| | 11 | * ChimeraX alpha 2 release? |
| | 12 | * Log vs session in ChimeraX |
| | 13 | * Rotamer library license |
| | 14 | * Next meeting |
| | 15 | - Chimera 1.12 release? |
| | 16 | - Who will develop mmCIF writer? [https://plato.cgl.ucsf.edu/trac/ChimeraX/ticket/752#comment:3 ticket] |
| | 17 | - ChimeraX on Github |
| | 18 | |
| | 19 | = Discussion = |
| | 20 | * ChimeraX paper |
| | 21 | - Cannot run Adobe Acrobat in a browser, waiting on Wiley |
| | 22 | - Ignore latest email message |
| | 23 | * Yet another new bundle building change |
| | 24 | - Works for daily build |
| | 25 | - Enhance bundle API to pass bundle/command info to '''register_command''' and '''start_tool''' |
| | 26 | - Bump version to 0.2 |
| | 27 | - Use try/except to handle 0.1 bundles in 0.2 |
| | 28 | * Sessions: msgpack vs pickle |
| | 29 | - Need to distinguish between tuples and lists when restoring |
| | 30 | - Development version of msgpack supports better type extensions |
| | 31 | - New msgpack session code handles tuples/lists but is ~10% slower than before |
| | 32 | - Use different extension mechanism to handle tuples/lists instead of overloading map serialization and checking for special {{{ __type__ }}} key |
| | 33 | - Other custom types, e.g., DateTime, will use new extension mechanism as well |
| | 34 | * ChimeraX alpha 2 release? |
| | 35 | - All will test sessions as much as possible. |
| | 36 | - ~~Eric will update splash screen image. |
| | 37 | - Conrad will generate session "release notes" limitations. |
| | 38 | - Check back on Monday. |
| | 39 | - Tom will make a list of major features added since alpha 1. |
| | 40 | - Eric will look into Elaine's core dump. |
| | 41 | - Need to run {{{ debug test }}}. |
| | 42 | * Log vs session |
| | 43 | - Preserve logs as history but not displayed when session is opened |
| | 44 | * Rotamer library license |
| | 45 | - "We will not divulge source to rotamer library" |
| | 46 | - We distribute a binary encoded file for part of the source data |
| | 47 | - Revise license to say "Chimera and ChimeraX" instead of just "Chimera" |
| | 48 | |
| | 49 | = Action Items = |
| | 50 | * Conrad will continue working on ribbon tickets |
| | 51 | * Conrad will investigate implementing the "like" operator |
| | 52 | - e.g., to specify polymer in atomspec |
| | 53 | * Scooter will investigate making tickets public (possibly marking some tickets private) |