Changes between Initial Version and Version 1 of Functionality


Ignore:
Timestamp:
Apr 6, 2015, 11:05:25 AM (11 years ago)
Author:
Tom Goddard
Comment:

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  • Functionality

    v1 v1  
     1= User Functionality =
     2
     3What initial areas of Chimera 2 functionality should we develop to allow users to do productive work more easily than with Chimera 1?
     4
     5There is a [http://www.cgl.ucsf.edu/chimera/data/hydra-mar2014/hydra.html#ideas list of deas] in Hydra feature slides from March 2014.
     6
     7Areas
     8
     9 * Scenes
     10 * Presentation images
     11 * cellPACK / multiscale models
     12 * Multi-Domain Assembler (port?)
     13 * Comparitive structure analysis (clustering, morphing, showing differences)
     14 * Optical microscopy 3d time series
     15 * Cross-links and EM, Jan Kosinski EMBL, IMP, Rosetta
     16 * Docking results analysis, ViewDock
     17 * Small ligand binding analysis (pocket surfaces, areas, hydrogen bonds, ...)
     18 * Evaluating 3A EM maps and atomic models
     19 * Map fitting
     20 * Map segmentation, Segger
     21 * Molecular dynamics