Changes between Initial Version and Version 1 of phenix-2-14-24


Ignore:
Timestamp:
Feb 14, 2024, 11:58:52 AM (22 months ago)
Author:
Eric Pettersen
Comment:

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  • phenix-2-14-24

    v1 v1  
     1= Phenix =
     2
     3=== Fit Loops ===
     4 * Revamped command/backend to handle possibly remodeling *only* a gap (no side residues)
     5 * Fixed ChimeraX bug that incorrectly sequenced newly modeled gap residues
     6 * Have tool warn user when modeling too many residues
     7
     8=== Emplace Local ===
     9 * Tool interface tweaks based on feedback
     10   * Left-align text
     11   * Align check boxes
     12   * Space between check boxes and bottom buttons
     13
     14= ChimeraX completed =
     15 * Made tables more compact
     16 * Don't send blank residue names to Antechamber
     17 * idatm_failed boolean for SPICE processing
     18 * File→Fetch by ID
     19 * Glycosylation support in Change Chain IDs and command
     20 * Specify model number in 'open'
     21 * Size atoms by attribute value
     22 * Don't output SEQRES for manually joined chains
     23 * pbond command
     24 * Modified sequence-header code to work in library distribution
     25 * 'measure rotation' can now make true axis objects
     26 * Don't send truncated HIS to Antechamber
     27 * Modeller: handle target deletion relative to template
     28 * Preliminary scene support
     29 * Nuke blank chain IDs when combining models