Ticket #18368: DiffFit#18368.txt

File DiffFit#18368.txt, 5.2 KB (added by Roden Deng Luo, 4 months ago)

Added by email2trac

Line 
1Jupyter QtConsole 5.5.2
2
3Current ChimeraX session available as 'session'.
4
5Python 3.11.4 (tags/v3.11.4:d2340ef, Jun 7 2023, 05:45:37) [MSC v.1934 64 bit (AMD64)]
6Type 'copyright', 'credits' or 'license' for more information
7IPython 8.26.0 -- An enhanced Interactive Python. Type '?' for help.
8
9import mrcfile
10
11path_to_map = 'C:\Users\luod\Downloads\emd_40589.map'
12 Cell In[2], line 1
13 path_to_map = 'C:\Users\luod\Downloads\emd_40589.map'
14 ^
15SyntaxError: (unicode error) 'unicodeescape' codec can't decode bytes in position 2-3: truncated \UXXXXXXXX escape
16
17
18path_to_map = r'C:\Users\luod\Downloads\emd_40589.map'
19
20path_to_map = r'C:\Users\luod\Downloads\emd_40589.map\emd_40589.map'
21
22try:
23 with mrcfile.open(path_to_map, mode='r') as mrc:
24 print("Header info:", mrc.header)
25 print("Data shape:", mrc.data.shape)
26except Exception as e:
27 print("Caught exception:", e)
28
29Header info: (400, 400, 400, 2, 0, 0, 0, 400, 400, 400, (334., 334., 334.), (90., 90., 90.), 1, 2, 3, -14.0112505, 21.881187, 0.01375722, 1, 0, b'\x00\x00\x00\x00\x00\x00\x00\x00', b'', 0, b'\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00', (0., 0., 0.), b'MAP ', [68, 65, 0, 0], 0.38660434, 1, [b'::::EMDATABANK.org::::EMD-40589:::: ', b' ', b' ', b' ', b' ', b' ', b' ', b' ', b' ', b' '])
30Data shape: (400, 400, 400)
31
32path_to_map = '"C:\Users\luod\Downloads\emd_40589.map\emd_40589.map'
33 Cell In[6], line 1
34 path_to_map = '"C:\Users\luod\Downloads\emd_40589.map\emd_40589.map'
35 ^
36SyntaxError: (unicode error) 'unicodeescape' codec can't decode bytes in position 3-4: truncated \UXXXXXXXX escape
37
38
39path_to_map = '"C:\\Users\\luod\\Downloads\\emd_40589.map\\emd_40589.map'
40
41try:
42 with mrcfile.open(path_to_map, mode='r') as mrc:
43 print("Header info:", mrc.header)
44 print("Data shape:", mrc.data.shape)
45except Exception as e:
46 print("Caught exception:", e)
47
48Caught exception: [Errno 22] Invalid argument: '"C:\\Users\\luod\\Downloads\\emd_40589.map\\emd_40589.map'
49
50path_to_map = '"C:\\Users\\luod\\Downloads\\emd_40589.map\\emd_40589.map"'
51
52try:
53 with mrcfile.open(path_to_map, mode='r') as mrc:
54 print("Header info:", mrc.header)
55 print("Data shape:", mrc.data.shape)
56except Exception as e:
57 print("Caught exception:", e)
58
59Caught exception: [Errno 22] Invalid argument: '"C:\\Users\\luod\\Downloads\\emd_40589.map\\emd_40589.map"'
60
61path_to_map = "C:\\Users\\luod\\Downloads\\emd_40589.map\\emd_40589.map"
62
63try:
64 with mrcfile.open(path_to_map, mode='r') as mrc:
65 print("Header info:", mrc.header)
66 print("Data shape:", mrc.data.shape)
67except Exception as e:
68 print("Caught exception:", e)
69
70Header info: (400, 400, 400, 2, 0, 0, 0, 400, 400, 400, (334., 334., 334.), (90., 90., 90.), 1, 2, 3, -14.0112505, 21.881187, 0.01375722, 1, 0, b'\x00\x00\x00\x00\x00\x00\x00\x00', b'', 0, b'\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00\x00', (0., 0., 0.), b'MAP ', [68, 65, 0, 0], 0.38660434, 1, [b'::::EMDATABANK.org::::EMD-40589:::: ', b' ', b' ', b' ', b' ', b' ', b' ', b' ', b' ', b' '])
71Data shape: (400, 400, 400)