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Opened 18 months ago
Closed 18 months ago
#15511 closed defect (duplicate)
Crash in garbage collection
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-11.7.10-x86_64-i386-64bit
ChimeraX Version: 1.7.1 (2024-01-23 01:58:08 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault
Thread 0x0000700022ac6000 (most recent call first):
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py", line 579 in _handle_results
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 975 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 1038 in _bootstrap_inner
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 995 in _bootstrap
Thread 0x0000700021ac3000 (most recent call first):
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py", line 531 in _handle_tasks
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 975 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 1038 in _bootstrap_inner
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 995 in _bootstrap
Thread 0x0000700020ac0000 (most recent call first):
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/selectors.py", line 415 in select
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/connection.py", line 930 in wait
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py", line 502 in _wait_for_updates
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py", line 522 in _handle_workers
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 975 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 1038 in _bootstrap_inner
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 995 in _bootstrap
Thread 0x000070001fabd000 (most recent call first):
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 975 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 1038 in _bootstrap_inner
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 995 in _bootstrap
Thread 0x000070001eaba000 (most recent call first):
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 975 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 1038 in _bootstrap_inner
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 995 in _bootstrap
Thread 0x000070001dab7000 (most recent call first):
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 975 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 1038 in _bootstrap_inner
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 995 in _bootstrap
Thread 0x000070001cab4000 (most recent call first):
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 975 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 1038 in _bootstrap_inner
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 995 in _bootstrap
Thread 0x000070001bab1000 (most recent call first):
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 975 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 1038 in _bootstrap_inner
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 995 in _bootstrap
Thread 0x000070001aaae000 (most recent call first):
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 975 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 1038 in _bootstrap_inner
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 995 in _bootstrap
Thread 0x0000700019aab000 (most recent call first):
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 975 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 1038 in _bootstrap_inner
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 995 in _bootstrap
Thread 0x0000700018aa8000 (most recent call first):
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py", line 114 in worker
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 975 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 1038 in _bootstrap_inner
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py", line 995 in _bootstrap
Current thread 0x0000000105fd5e00 (most recent call first):
Garbage-collecting
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/serialize.py", line 81 in msgpack_deserialize
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/session.py", line 721 in restore
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/session.py", line 1017 in open
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core_formats/__init__.py", line 37 in open
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/open_command/cmd.py", line 484 in remember_data_format
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/open_command/cmd.py", line 514 in collated_open
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/open_command/cmd.py", line 213 in provider_open
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/commands/cli.py", line 2908 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/open_command/cmd.py", line 131 in cmd_open
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/commands/cli.py", line 2908 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/commands/run.py", line 49 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/widgets/htmlview.py", line 464 in cxcmd
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/widgets/htmlview.py", line 446 in defer
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/gui.py", line 375 in thread_safe
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/widgets/htmlview.py", line 455 in chimerax_intercept
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/widgets/htmlview.py", line 353 in intercept
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/widgets/htmlview.py", line 93 in _intercept
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/widgets/htmlview.py", line 320 in interceptRequest
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/gui.py", line 275 in event_loop
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 918 in init
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1069 in
File "", line 88 in _run_code
File "", line 198 in _run_module_as_main
Extension modules: chimerax.arrays._arrays, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, PyQt6.QtWebChannel, PyQt6.QtNetwork, PyQt6.QtWebEngineCore, PyQt6.QtPrintSupport, PyQt6.QtWebEngineWidgets, chimerax.atomic_lib._load_libs, tinyarray, chimerax.atomic.cymol, chimerax.atomic.cytmpl, chimerax.map._map, chimerax.pdb_lib._load_libs, charset_normalizer.md, PIL._imaging, matplotlib._c_internal_utils, matplotlib._path, kiwisolver._cext, matplotlib._image, PyQt6.QtOpenGL, PyQt6.QtOpenGLWidgets, OpenGL_accelerate.errorchecker, OpenGL_accelerate.wrapper, OpenGL_accelerate.formathandler, OpenGL_accelerate.arraydatatype, OpenGL_accelerate.latebind, OpenGL_accelerate.vbo, chimerax.surface._surface, chimerax.core._mac_util, OpenGL_accelerate.numpy_formathandler, OpenGL_accelerate.nones_formathandler, chimerax.mmcif._mmcif, chimerax.mmcif.mmcif, chimerax.atomic._ribbons, chimerax.graphics._graphics, chimerax.pdb._pdbio, chimerax.atom_search.ast, chimerax.chem_group._chem_group, chimerax.coulombic._esp, PIL._imagingmath, lz4._version, lz4.frame._frame, msgpack._cmsgpack, chimerax.core._serialize, numpy.linalg.lapack_lite (total: 61)
Process: ChimeraX [2434]
Path: /Applications/ChimeraX-1.7.1.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.7.1 (1.7.1.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [2434]
User ID: 501
Date/Time: 2024-06-27 16:07:59.817 -0500
OS Version: macOS 11.7.10 (20G1427)
Report Version: 12
Anonymous UUID: 42C39B84-76B1-D256-ECA3-5A4F37AC0FEF
Sleep/Wake UUID: FBB6FC5B-262B-414C-9F6A-0111C39E3252
Time Awake Since Boot: 22000 seconds
Time Since Wake: 10000 seconds
System Integrity Protection: enabled
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_ACCESS (SIGSEGV)
Exception Codes: KERN_INVALID_ADDRESS at 0x00000000000000a9
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0xa9:
-->
__TEXT 101b92000-101b96000 [ 16K] r-x/r-x SM=COW /Applications/ChimeraX-1.7.1.app/Contents/MacOS/ChimeraX
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff206fc90e __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff2072b5bd pthread_kill + 263
2 libsystem_c.dylib 0x00007fff2060fbd5 raise + 26
3 org.python.python 0x0000000101e1e5d4 faulthandler_fatal_error + 388
4 libsystem_platform.dylib 0x00007fff20770d7d _sigtramp + 29
5 ??? 000000000000000000 0 + 0
6 org.python.python 0x0000000101c991f3 dict_traverse + 195
7 org.python.python 0x0000000101e1a888 gc_collect_main + 2568
8 org.python.python 0x0000000101e1c102 _PyObject_GC_Link + 306
9 org.python.python 0x0000000101c84fb1 PyList_New + 369
10 _cmsgpack.cpython-311-darwin.so 0x0000000134556ad5 int unpack_execute(unpack_context*, char const*, long, long*) + 373
11 _cmsgpack.cpython-311-darwin.so 0x000000013455aae1 __pyx_pw_7msgpack_9_cmsgpack_3unpackb(_object*, _object*, _object*) + 2705
12 org.python.python 0x0000000101cb17c4 cfunction_call + 52
13 _serialize.cpython-311-darwin.so 0x000000012231c7c2 __pyx_f_8chimerax_4core_10_serialize__decode_bytes(_object*) + 258
14 _serialize.cpython-311-darwin.so 0x0000000122313e6f __pyx_f_8chimerax_4core_10_serialize__decode_ext(int, _object*) + 687
15 _serialize.cpython-311-darwin.so 0x000000012231c1d6 __pyx_pw_11cfunc_dot_to_py_42__Pyx_CFunc_object____int____bytes___to_py_1wrap(_object*, _object*, _object*) + 134
16 org.python.python 0x0000000101c4c3b1 _PyObject_MakeTpCall + 129
17 org.python.python 0x0000000101c4dd69 _PyObject_CallFunctionVa + 809
18 org.python.python 0x0000000101c4dfdf _PyObject_CallFunction_SizeT + 159
19 _cmsgpack.cpython-311-darwin.so 0x0000000134557126 int unpack_execute(unpack_context*, char const*, long, long*) + 1990
20 _cmsgpack.cpython-311-darwin.so 0x00000001345515e3 __pyx_f_7msgpack_9_cmsgpack_8Unpacker__unpack(__pyx_obj_7msgpack_9_cmsgpack_Unpacker*, int (*)(unpack_context*, char const*, long, long*), __pyx_opt_args_7msgpack_9_cmsgpack_8Unpacker__unpack*) + 115
21 _cmsgpack.cpython-311-darwin.so 0x0000000134555546 __pyx_pw_7msgpack_9_cmsgpack_8Unpacker_23__next__(_object*) + 38
22 org.python.python 0x0000000101d659d7 builtin_next + 71
23 org.python.python 0x0000000101d7c3be _PyEval_EvalFrameDefault + 68606
24 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
25 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
26 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
27 org.python.python 0x0000000101c5071f method_vectorcall + 207
28 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
29 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
30 org.python.python 0x0000000101c4cf78 _PyVectorcall_Call + 120
31 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
32 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
33 org.python.python 0x0000000101c4cf78 _PyVectorcall_Call + 120
34 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
35 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
36 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
37 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
38 org.python.python 0x0000000101c4cf78 _PyVectorcall_Call + 120
39 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
40 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
41 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
42 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
43 org.python.python 0x0000000101c5071f method_vectorcall + 207
44 sip.cpython-311-darwin.so 0x00000001134ac367 sip_api_call_procedure_method + 199
45 QtWebEngineCore.abi3.so 0x000000012098ed0e sipQWebEngineUrlRequestInterceptor::interceptRequest(QWebEngineUrlRequestInfo&) + 110
46 QtWebEngineCore 0x0000000115104d97 0x11508c000 + 494999
47 QtWebEngineCore 0x0000000115104405 0x11508c000 + 492549
48 QtWebEngineCore 0x0000000115105cbd 0x11508c000 + 498877
49 QtWebEngineCore 0x00000001156f79ff 0x11508c000 + 6732287
50 QtWebEngineCore 0x00000001197d5b0a 0x11508c000 + 74750730
51 QtWebEngineCore 0x00000001197d9f8f 0x11508c000 + 74768271
52 QtWebEngineCore 0x00000001197d6f2d 0x11508c000 + 74755885
53 QtWebEngineCore 0x00000001197de985 0x11508c000 + 74787205
54 QtWebEngineCore 0x00000001197de144 0x11508c000 + 74785092
55 QtWebEngineCore 0x00000001197d9fcb 0x11508c000 + 74768331
56 QtWebEngineCore 0x00000001197d2cbb 0x11508c000 + 74738875
57 QtWebEngineCore 0x00000001197d35ff 0x11508c000 + 74741247
58 QtWebEngineCore 0x00000001197f292b 0x11508c000 + 74869035
59 QtWebEngineCore 0x0000000118f50689 0x11508c000 + 65816201
60 QtWebEngineCore 0x0000000118f6928f 0x11508c000 + 65917583
61 QtWebEngineCore 0x0000000118f68fca 0x11508c000 + 65916874
62 QtWebEngineCore 0x0000000118f69812 0x11508c000 + 65918994
63 QtWebEngineCore 0x00000001150cac2a 0x11508c000 + 257066
64 QtCore 0x000000011109c4cd QObject::event(QEvent*) + 109
65 QtWidgets 0x0000000113af0a87 QApplicationPrivate::notify_helper(QObject*, QEvent*) + 247
66 QtWidgets 0x0000000113af1a43 QApplication::notify(QObject*, QEvent*) + 499
67 QtWidgets.abi3.so 0x000000011360d1e6 sipQApplication::notify(QObject*, QEvent*) + 230
68 QtCore 0x0000000111053c3a QCoreApplication::notifyInternal2(QObject*, QEvent*) + 170
69 QtCore 0x0000000111054d52 QCoreApplicationPrivate::sendPostedEvents(QObject*, int, QThreadData*) + 802
70 libqcocoa.dylib 0x0000000120b11b8b 0x120af8000 + 105355
71 libqcocoa.dylib 0x0000000120b1229b 0x120af8000 + 107163
72 com.apple.CoreFoundation 0x00007fff20823cdc __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
73 com.apple.CoreFoundation 0x00007fff20823c44 __CFRunLoopDoSource0 + 180
74 com.apple.CoreFoundation 0x00007fff208239c4 __CFRunLoopDoSources0 + 242
75 com.apple.CoreFoundation 0x00007fff208223ec __CFRunLoopRun + 893
76 com.apple.CoreFoundation 0x00007fff208219ac CFRunLoopRunSpecific + 563
77 com.apple.HIToolbox 0x00007fff28a6c1f3 RunCurrentEventLoopInMode + 292
78 com.apple.HIToolbox 0x00007fff28a6bf55 ReceiveNextEventCommon + 587
79 com.apple.HIToolbox 0x00007fff28a6bcf3 _BlockUntilNextEventMatchingListInModeWithFilter + 70
80 com.apple.AppKit 0x00007fff2302bad2 _DPSNextEvent + 864
81 com.apple.AppKit 0x00007fff2302a2a5 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1364
82 com.apple.AppKit 0x00007fff2301c5c9 -[NSApplication run] + 586
83 libqcocoa.dylib 0x0000000120b110ac 0x120af8000 + 102572
84 QtCore 0x000000011105d326 QEventLoop::exec(QFlags) + 486
85 QtCore 0x0000000111054235 QCoreApplication::exec() + 133
86 QtWidgets.abi3.so 0x00000001136f9d9a meth_QApplication_exec(_object*, _object*) + 90
87 org.python.python 0x0000000101cb17ea cfunction_call + 90
88 org.python.python 0x0000000101c4c3b1 _PyObject_MakeTpCall + 129
89 org.python.python 0x0000000101d7a3e7 _PyEval_EvalFrameDefault + 60455
90 org.python.python 0x0000000101d6a47a PyEval_EvalCode + 282
91 org.python.python 0x0000000101d64ce3 builtin_exec + 483
92 org.python.python 0x0000000101cb2144 cfunction_vectorcall_FASTCALL_KEYWORDS + 68
93 org.python.python 0x0000000101d7a2ef _PyEval_EvalFrameDefault + 60207
94 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
95 org.python.python 0x0000000101e176fd pymain_run_module + 253
96 org.python.python 0x0000000101e171c1 Py_RunMain + 2225
97 org.python.python 0x0000000101e1817b pymain_main + 43
98 org.python.python 0x0000000101e1814a Py_Main + 42
99 edu.ucsf.cgl.ChimeraX 0x0000000101b95d9a main + 122
100 libdyld.dylib 0x00007fff20746f3d start + 1
Thread 1:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff206ff1b2 kevent64 + 10
1 QtWebEngineCore 0x0000000118feca2a 0x11508c000 + 66456106
2 QtWebEngineCore 0x0000000118fec927 0x11508c000 + 66455847
3 QtWebEngineCore 0x0000000118f69a5c 0x11508c000 + 65919580
4 QtWebEngineCore 0x0000000118f21998 0x11508c000 + 65624472
5 QtWebEngineCore 0x0000000118f8beb8 0x11508c000 + 66059960
6 QtWebEngineCore 0x0000000118f732ad 0x11508c000 + 65958573
7 QtWebEngineCore 0x0000000118f8c04a 0x11508c000 + 66060362
8 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
9 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 2:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff206f629a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff206f660c mach_msg + 60
2 QtWebEngineCore 0x0000000118fbae26 0x11508c000 + 66252326
3 QtWebEngineCore 0x0000000118f7f7bf 0x11508c000 + 66009023
4 QtWebEngineCore 0x0000000118f8026c 0x11508c000 + 66011756
5 QtWebEngineCore 0x0000000118f7fddd 0x11508c000 + 66010589
6 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
7 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 3:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff206ff1b2 kevent64 + 10
1 QtWebEngineCore 0x0000000118feca2a 0x11508c000 + 66456106
2 QtWebEngineCore 0x0000000118fec927 0x11508c000 + 66455847
3 QtWebEngineCore 0x0000000118f69a5c 0x11508c000 + 65919580
4 QtWebEngineCore 0x0000000118f21998 0x11508c000 + 65624472
5 QtWebEngineCore 0x0000000118f8beb8 0x11508c000 + 66059960
6 QtWebEngineCore 0x0000000117eb13a2 0x11508c000 + 48386978
7 QtWebEngineCore 0x0000000118f8c04a 0x11508c000 + 66060362
8 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
9 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 4:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff206f629a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff206f660c mach_msg + 60
2 QtWebEngineCore 0x0000000118fbae26 0x11508c000 + 66252326
3 QtWebEngineCore 0x0000000118fbabef 0x11508c000 + 66251759
4 QtWebEngineCore 0x0000000118ef01c9 0x11508c000 + 65421769
5 QtWebEngineCore 0x0000000118f69a5c 0x11508c000 + 65919580
6 QtWebEngineCore 0x0000000118f21998 0x11508c000 + 65624472
7 QtWebEngineCore 0x0000000118f8beb8 0x11508c000 + 66059960
8 QtWebEngineCore 0x0000000118f8c04a 0x11508c000 + 66060362
9 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
10 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
11 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 5:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff206f629a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff206f660c mach_msg + 60
2 QtWebEngineCore 0x0000000118fbae26 0x11508c000 + 66252326
3 QtWebEngineCore 0x0000000118f7f7bf 0x11508c000 + 66009023
4 QtWebEngineCore 0x0000000118f8026c 0x11508c000 + 66011756
5 QtWebEngineCore 0x0000000118f7fe6d 0x11508c000 + 66010733
6 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
7 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 6:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff206f8cbe __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2072be49 _pthread_cond_wait + 1298
2 QtWebEngineCore 0x0000000118fb2d1b 0x11508c000 + 66219291
3 QtWebEngineCore 0x000000011b08092d 0x11508c000 + 100616493
4 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
5 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
6 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 7:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff206f629a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff206f660c mach_msg + 60
2 QtWebEngineCore 0x0000000118fbae26 0x11508c000 + 66252326
3 QtWebEngineCore 0x0000000118ef0168 0x11508c000 + 65421672
4 QtWebEngineCore 0x0000000118f69a5c 0x11508c000 + 65919580
5 QtWebEngineCore 0x0000000118f21998 0x11508c000 + 65624472
6 QtWebEngineCore 0x0000000118f8beb8 0x11508c000 + 66059960
7 QtWebEngineCore 0x0000000118f8c04a 0x11508c000 + 66060362
8 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
9 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 8:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff206ff1b2 kevent64 + 10
1 QtWebEngineCore 0x0000000118feca2a 0x11508c000 + 66456106
2 QtWebEngineCore 0x0000000118fec927 0x11508c000 + 66455847
3 QtWebEngineCore 0x0000000118f69a5c 0x11508c000 + 65919580
4 QtWebEngineCore 0x0000000118f21998 0x11508c000 + 65624472
5 QtWebEngineCore 0x0000000118f8beb8 0x11508c000 + 66059960
6 QtWebEngineCore 0x0000000118f8c04a 0x11508c000 + 66060362
7 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
8 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 9:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff206f629a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff206f660c mach_msg + 60
2 QtWebEngineCore 0x0000000118fbae26 0x11508c000 + 66252326
3 QtWebEngineCore 0x0000000118fbabef 0x11508c000 + 66251759
4 QtWebEngineCore 0x0000000118ef01c9 0x11508c000 + 65421769
5 QtWebEngineCore 0x0000000118f69a5c 0x11508c000 + 65919580
6 QtWebEngineCore 0x0000000118f21998 0x11508c000 + 65624472
7 QtWebEngineCore 0x0000000118f8beb8 0x11508c000 + 66059960
8 QtWebEngineCore 0x0000000118f8c04a 0x11508c000 + 66060362
9 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
10 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
11 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 10:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff206f629a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff206f660c mach_msg + 60
2 QtWebEngineCore 0x0000000118fbae26 0x11508c000 + 66252326
3 QtWebEngineCore 0x0000000118ef0168 0x11508c000 + 65421672
4 QtWebEngineCore 0x0000000118f69a5c 0x11508c000 + 65919580
5 QtWebEngineCore 0x0000000118f21998 0x11508c000 + 65624472
6 QtWebEngineCore 0x0000000118f8beb8 0x11508c000 + 66059960
7 QtWebEngineCore 0x0000000118f8c04a 0x11508c000 + 66060362
8 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
9 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
10 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 11:: NetworkService
0 libsystem_kernel.dylib 0x00007fff206ff1b2 kevent64 + 10
1 QtWebEngineCore 0x0000000118feca2a 0x11508c000 + 66456106
2 QtWebEngineCore 0x0000000118fec927 0x11508c000 + 66455847
3 QtWebEngineCore 0x0000000118f69a5c 0x11508c000 + 65919580
4 QtWebEngineCore 0x0000000118f21998 0x11508c000 + 65624472
5 QtWebEngineCore 0x0000000118f8beb8 0x11508c000 + 66059960
6 QtWebEngineCore 0x0000000118f8c04a 0x11508c000 + 66060362
7 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
8 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
9 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 12:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff206f629a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff206f660c mach_msg + 60
2 QtWebEngineCore 0x0000000118fbae26 0x11508c000 + 66252326
3 QtWebEngineCore 0x0000000118fbabef 0x11508c000 + 66251759
4 QtWebEngineCore 0x0000000118ef01c9 0x11508c000 + 65421769
5 QtWebEngineCore 0x0000000118f69a5c 0x11508c000 + 65919580
6 QtWebEngineCore 0x0000000118f21998 0x11508c000 + 65624472
7 QtWebEngineCore 0x0000000118f8beb8 0x11508c000 + 66059960
8 QtWebEngineCore 0x0000000118f8c04a 0x11508c000 + 66060362
9 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
10 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
11 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 13:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff206f629a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff206f660c mach_msg + 60
2 QtWebEngineCore 0x0000000118fbae26 0x11508c000 + 66252326
3 QtWebEngineCore 0x0000000118f7f7bf 0x11508c000 + 66009023
4 QtWebEngineCore 0x0000000118f8026c 0x11508c000 + 66011756
5 QtWebEngineCore 0x0000000118f7fecd 0x11508c000 + 66010829
6 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
7 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 14:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff206f629a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff206f660c mach_msg + 60
2 QtWebEngineCore 0x0000000118fbae26 0x11508c000 + 66252326
3 QtWebEngineCore 0x0000000118fbabef 0x11508c000 + 66251759
4 QtWebEngineCore 0x0000000118ef01c9 0x11508c000 + 65421769
5 QtWebEngineCore 0x0000000118f69a5c 0x11508c000 + 65919580
6 QtWebEngineCore 0x0000000118f21998 0x11508c000 + 65624472
7 QtWebEngineCore 0x0000000118f8beb8 0x11508c000 + 66059960
8 QtWebEngineCore 0x0000000118f8c04a 0x11508c000 + 66060362
9 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
10 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
11 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 15:
0 libsystem_kernel.dylib 0x00007fff206f8cbe __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2072be49 _pthread_cond_wait + 1298
2 org.python.python 0x0000000101e04272 PyThread_acquire_lock_timed + 434
3 _queue.cpython-311-darwin.so 0x00000001227fb4b3 _queue_SimpleQueue_get_impl + 211
4 _queue.cpython-311-darwin.so 0x00000001227fb174 _queue_SimpleQueue_get + 196
5 org.python.python 0x0000000101cb2565 cfunction_vectorcall_FASTCALL_KEYWORDS_METHOD + 101
6 org.python.python 0x0000000101d7a2ef _PyEval_EvalFrameDefault + 60207
7 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
8 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
9 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
10 org.python.python 0x0000000101c50816 method_vectorcall + 454
11 org.python.python 0x0000000101e88b26 thread_run + 230
12 org.python.python 0x0000000101e03ea4 pythread_wrapper + 36
13 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
14 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 16:
0 libsystem_kernel.dylib 0x00007fff206f8cbe __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2072be49 _pthread_cond_wait + 1298
2 org.python.python 0x0000000101e04272 PyThread_acquire_lock_timed + 434
3 _queue.cpython-311-darwin.so 0x00000001227fb4b3 _queue_SimpleQueue_get_impl + 211
4 _queue.cpython-311-darwin.so 0x00000001227fb174 _queue_SimpleQueue_get + 196
5 org.python.python 0x0000000101cb2565 cfunction_vectorcall_FASTCALL_KEYWORDS_METHOD + 101
6 org.python.python 0x0000000101d7a2ef _PyEval_EvalFrameDefault + 60207
7 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
8 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
9 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
10 org.python.python 0x0000000101c50816 method_vectorcall + 454
11 org.python.python 0x0000000101e88b26 thread_run + 230
12 org.python.python 0x0000000101e03ea4 pythread_wrapper + 36
13 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
14 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 17:
0 libsystem_kernel.dylib 0x00007fff206f8cbe __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2072be49 _pthread_cond_wait + 1298
2 org.python.python 0x0000000101e04272 PyThread_acquire_lock_timed + 434
3 _queue.cpython-311-darwin.so 0x00000001227fb4b3 _queue_SimpleQueue_get_impl + 211
4 _queue.cpython-311-darwin.so 0x00000001227fb174 _queue_SimpleQueue_get + 196
5 org.python.python 0x0000000101cb2565 cfunction_vectorcall_FASTCALL_KEYWORDS_METHOD + 101
6 org.python.python 0x0000000101d7a2ef _PyEval_EvalFrameDefault + 60207
7 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
8 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
9 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
10 org.python.python 0x0000000101c50816 method_vectorcall + 454
11 org.python.python 0x0000000101e88b26 thread_run + 230
12 org.python.python 0x0000000101e03ea4 pythread_wrapper + 36
13 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
14 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 18:
0 libsystem_kernel.dylib 0x00007fff206f8cbe __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2072be49 _pthread_cond_wait + 1298
2 org.python.python 0x0000000101e04272 PyThread_acquire_lock_timed + 434
3 _queue.cpython-311-darwin.so 0x00000001227fb4b3 _queue_SimpleQueue_get_impl + 211
4 _queue.cpython-311-darwin.so 0x00000001227fb174 _queue_SimpleQueue_get + 196
5 org.python.python 0x0000000101cb2565 cfunction_vectorcall_FASTCALL_KEYWORDS_METHOD + 101
6 org.python.python 0x0000000101d7a2ef _PyEval_EvalFrameDefault + 60207
7 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
8 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
9 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
10 org.python.python 0x0000000101c50816 method_vectorcall + 454
11 org.python.python 0x0000000101e88b26 thread_run + 230
12 org.python.python 0x0000000101e03ea4 pythread_wrapper + 36
13 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
14 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 19:
0 libsystem_kernel.dylib 0x00007fff206f8cbe __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2072be49 _pthread_cond_wait + 1298
2 org.python.python 0x0000000101e04272 PyThread_acquire_lock_timed + 434
3 _queue.cpython-311-darwin.so 0x00000001227fb4b3 _queue_SimpleQueue_get_impl + 211
4 _queue.cpython-311-darwin.so 0x00000001227fb174 _queue_SimpleQueue_get + 196
5 org.python.python 0x0000000101cb2565 cfunction_vectorcall_FASTCALL_KEYWORDS_METHOD + 101
6 org.python.python 0x0000000101d7a2ef _PyEval_EvalFrameDefault + 60207
7 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
8 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
9 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
10 org.python.python 0x0000000101c50816 method_vectorcall + 454
11 org.python.python 0x0000000101e88b26 thread_run + 230
12 org.python.python 0x0000000101e03ea4 pythread_wrapper + 36
13 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
14 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 20:
0 libsystem_kernel.dylib 0x00007fff206f8cbe __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2072be49 _pthread_cond_wait + 1298
2 org.python.python 0x0000000101e04272 PyThread_acquire_lock_timed + 434
3 _queue.cpython-311-darwin.so 0x00000001227fb4b3 _queue_SimpleQueue_get_impl + 211
4 _queue.cpython-311-darwin.so 0x00000001227fb174 _queue_SimpleQueue_get + 196
5 org.python.python 0x0000000101cb2565 cfunction_vectorcall_FASTCALL_KEYWORDS_METHOD + 101
6 org.python.python 0x0000000101d7a2ef _PyEval_EvalFrameDefault + 60207
7 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
8 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
9 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
10 org.python.python 0x0000000101c50816 method_vectorcall + 454
11 org.python.python 0x0000000101e88b26 thread_run + 230
12 org.python.python 0x0000000101e03ea4 pythread_wrapper + 36
13 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
14 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 21:
0 libsystem_kernel.dylib 0x00007fff206f8cbe __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2072be49 _pthread_cond_wait + 1298
2 org.python.python 0x0000000101e04272 PyThread_acquire_lock_timed + 434
3 _queue.cpython-311-darwin.so 0x00000001227fb4b3 _queue_SimpleQueue_get_impl + 211
4 _queue.cpython-311-darwin.so 0x00000001227fb174 _queue_SimpleQueue_get + 196
5 org.python.python 0x0000000101cb2565 cfunction_vectorcall_FASTCALL_KEYWORDS_METHOD + 101
6 org.python.python 0x0000000101d7a2ef _PyEval_EvalFrameDefault + 60207
7 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
8 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
9 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
10 org.python.python 0x0000000101c50816 method_vectorcall + 454
11 org.python.python 0x0000000101e88b26 thread_run + 230
12 org.python.python 0x0000000101e03ea4 pythread_wrapper + 36
13 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
14 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 22:
0 libsystem_kernel.dylib 0x00007fff206f8cbe __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2072be49 _pthread_cond_wait + 1298
2 org.python.python 0x0000000101e04272 PyThread_acquire_lock_timed + 434
3 _queue.cpython-311-darwin.so 0x00000001227fb4b3 _queue_SimpleQueue_get_impl + 211
4 _queue.cpython-311-darwin.so 0x00000001227fb174 _queue_SimpleQueue_get + 196
5 org.python.python 0x0000000101cb2565 cfunction_vectorcall_FASTCALL_KEYWORDS_METHOD + 101
6 org.python.python 0x0000000101d7a2ef _PyEval_EvalFrameDefault + 60207
7 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
8 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
9 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
10 org.python.python 0x0000000101c50816 method_vectorcall + 454
11 org.python.python 0x0000000101e88b26 thread_run + 230
12 org.python.python 0x0000000101e03ea4 pythread_wrapper + 36
13 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
14 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 23:
0 libsystem_kernel.dylib 0x00007fff206fc9aa poll + 10
1 select.cpython-311-darwin.so 0x00000001029256a5 select_poll_poll + 149
2 org.python.python 0x0000000101c5de18 method_vectorcall_FASTCALL + 104
3 org.python.python 0x0000000101d7a2ef _PyEval_EvalFrameDefault + 60207
4 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
5 org.python.python 0x0000000101c5071f method_vectorcall + 207
6 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
7 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
8 org.python.python 0x0000000101c50816 method_vectorcall + 454
9 org.python.python 0x0000000101e88b26 thread_run + 230
10 org.python.python 0x0000000101e03ea4 pythread_wrapper + 36
11 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
12 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 24:
0 libsystem_kernel.dylib 0x00007fff206f8cbe __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2072be49 _pthread_cond_wait + 1298
2 org.python.python 0x0000000101e04272 PyThread_acquire_lock_timed + 434
3 _queue.cpython-311-darwin.so 0x00000001227fb4b3 _queue_SimpleQueue_get_impl + 211
4 _queue.cpython-311-darwin.so 0x00000001227fb174 _queue_SimpleQueue_get + 196
5 org.python.python 0x0000000101cb2565 cfunction_vectorcall_FASTCALL_KEYWORDS_METHOD + 101
6 org.python.python 0x0000000101c7b0af calliter_iternext + 79
7 org.python.python 0x0000000101d7878d _PyEval_EvalFrameDefault + 53197
8 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
9 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
10 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
11 org.python.python 0x0000000101c50816 method_vectorcall + 454
12 org.python.python 0x0000000101e88b26 thread_run + 230
13 org.python.python 0x0000000101e03ea4 pythread_wrapper + 36
14 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
15 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 25:
0 libsystem_kernel.dylib 0x00007fff206f8cbe __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2072be49 _pthread_cond_wait + 1298
2 org.python.python 0x0000000101e04272 PyThread_acquire_lock_timed + 434
3 _queue.cpython-311-darwin.so 0x00000001227fb4b3 _queue_SimpleQueue_get_impl + 211
4 _queue.cpython-311-darwin.so 0x00000001227fb174 _queue_SimpleQueue_get + 196
5 org.python.python 0x0000000101cb2565 cfunction_vectorcall_FASTCALL_KEYWORDS_METHOD + 101
6 org.python.python 0x0000000101d7a2ef _PyEval_EvalFrameDefault + 60207
7 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
8 org.python.python 0x0000000101d7d54a _PyEval_EvalFrameDefault + 73098
9 org.python.python 0x0000000101d804d0 _PyEval_Vector + 128
10 org.python.python 0x0000000101c50816 method_vectorcall + 454
11 org.python.python 0x0000000101e88b26 thread_run + 230
12 org.python.python 0x0000000101e03ea4 pythread_wrapper + 36
13 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
14 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 26:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff206f629a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff206f660c mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff20823ebf __CFRunLoopServiceMachPort + 316
3 com.apple.CoreFoundation 0x00007fff2082259f __CFRunLoopRun + 1328
4 com.apple.CoreFoundation 0x00007fff208219ac CFRunLoopRunSpecific + 563
5 com.apple.AppKit 0x00007fff231b1b7a _NSEventThread + 124
6 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
7 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 27:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff206f629a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff206f660c mach_msg + 60
2 QtWebEngineCore 0x0000000118fbae26 0x11508c000 + 66252326
3 QtWebEngineCore 0x0000000118fbabef 0x11508c000 + 66251759
4 QtWebEngineCore 0x0000000118ef01c9 0x11508c000 + 65421769
5 QtWebEngineCore 0x0000000118f69a5c 0x11508c000 + 65919580
6 QtWebEngineCore 0x0000000118f21998 0x11508c000 + 65624472
7 QtWebEngineCore 0x0000000118f8beb8 0x11508c000 + 66059960
8 QtWebEngineCore 0x0000000118f8c04a 0x11508c000 + 66060362
9 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
10 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
11 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 28:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 libsystem_kernel.dylib 0x00007fff206f629a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff206f660c mach_msg + 60
2 QtWebEngineCore 0x0000000118fbae26 0x11508c000 + 66252326
3 QtWebEngineCore 0x0000000118f7f7bf 0x11508c000 + 66009023
4 QtWebEngineCore 0x0000000118f7ff9a 0x11508c000 + 66011034
5 QtWebEngineCore 0x0000000118f7fe0d 0x11508c000 + 66010637
6 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
7 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 29:: QFileInfoGatherer
0 libsystem_kernel.dylib 0x00007fff206f8cbe __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2072be49 _pthread_cond_wait + 1298
2 QtCore 0x00000001111e88eb 0x110fe6000 + 2107627
3 QtCore 0x00000001111e885e QWaitCondition::wait(QMutex*, QDeadlineTimer) + 94
4 QtGui 0x000000011454de0d QFileInfoGatherer::run() + 125
5 QtCore 0x00000001111de663 0x110fe6000 + 2066019
6 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
7 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 30:
0 libsystem_pthread.dylib 0x00007fff20727420 start_wqthread + 0
Thread 31:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff206f629a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff206f660c mach_msg + 60
2 QtWebEngineCore 0x0000000118fbae26 0x11508c000 + 66252326
3 QtWebEngineCore 0x0000000118f7f7bf 0x11508c000 + 66009023
4 QtWebEngineCore 0x0000000118f7ff9a 0x11508c000 + 66011034
5 QtWebEngineCore 0x0000000118f7fe6d 0x11508c000 + 66010733
6 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
7 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 32:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff206f629a mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff206f660c mach_msg + 60
2 QtWebEngineCore 0x0000000118fbae26 0x11508c000 + 66252326
3 QtWebEngineCore 0x0000000118f7f7bf 0x11508c000 + 66009023
4 QtWebEngineCore 0x0000000118f7ff9a 0x11508c000 + 66011034
5 QtWebEngineCore 0x0000000118f7fddd 0x11508c000 + 66010589
6 QtWebEngineCore 0x0000000118fb3908 0x11508c000 + 66222344
7 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
8 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 33:
0 libsystem_kernel.dylib 0x00007fff206f8cbe __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2072be49 _pthread_cond_wait + 1298
2 libopenblas64_.0.dylib 0x000000010636467f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 34:
0 libsystem_kernel.dylib 0x00007fff206f8cbe __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2072be49 _pthread_cond_wait + 1298
2 libopenblas64_.0.dylib 0x000000010636467f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 35:
0 libsystem_kernel.dylib 0x00007fff206f8cbe __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff2072be49 _pthread_cond_wait + 1298
2 libopenblas64_.0.dylib 0x000000010636467f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff2072b8fc _pthread_start + 224
4 libsystem_pthread.dylib 0x00007fff20727443 thread_start + 15
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x0000000105fd5e00 rcx: 0x00007fea2b5dd9e8 rdx: 0x0000000000000000
rdi: 0x0000000000000103 rsi: 0x000000000000000b rbp: 0x00007fea2b5dda10 rsp: 0x00007fea2b5dd9e8
r8: 0x0000000000000002 r9: 0xcccccccccccccccd r10: 0x0000000105fd5e00 r11: 0x0000000000000246
r12: 0x0000000000000103 r13: 0x0000000101e1b801 r14: 0x000000000000000b r15: 0x0000000000000016
rip: 0x00007fff206fc90e rfl: 0x0000000000000246 cr2: 0x0000000101f8a720
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Thread 0 instruction stream:
ff ff ff ff 48 89 d8 48-8b 00 48 ff c2 48 39 c3 ....H..H..H..H9.
75 f5 48 8d 3d c5 12 16-00 48 8d b5 70 ff ff ff u.H.=....H..p...
31 c0 e8 bf 83 fe ff 48-8b 05 68 e7 16 00 48 8b 1......H..h...H.
00 48 3b 45 d8 75 0d 48-83 c4 70 5b 41 5c 41 5e .H;E.u.H..p[A\A^
41 5f 5d c3 e8 cd ae 0e-00 66 2e 0f 1f 84 00 00 A_]......f......
00 00 00 0f 1f 00 55 48-89 e5 53 50 48 8b 47 08 ......UH..SPH.G.
[f6]80 a9 00 00 00 40 75-09 31 c0 48 83 c4 08 5b ......@u.1.H...[ /Applications/ChimeraX-1.7.1.app/Contents/MacOS/ChimeraX
0x101ba6000 - 0x101f89fff +org.python.python (3.11.2, [c] 2001-2023 Python Software Foundation. - 3.11.2) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/Python
0x1024e4000 - 0x1024effff +math.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/math.cpython-311-darwin.so
0x102600000 - 0x10260ffff +_datetime.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_datetime.cpython-311-darwin.so
0x102624000 - 0x102627fff +_typing.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_typing.cpython-311-darwin.so
0x102734000 - 0x10273bfff +zlib.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/zlib.cpython-311-darwin.so
0x10274c000 - 0x10274ffff +_bz2.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_bz2.cpython-311-darwin.so
0x10275c000 - 0x10278bfff +_lzma.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_lzma.cpython-311-darwin.so
0x1027a0000 - 0x1027a3fff +_bisect.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_bisect.cpython-311-darwin.so
0x1027b0000 - 0x1027b3fff +_random.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_random.cpython-311-darwin.so
0x1027c0000 - 0x1027c7fff +_sha512.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_sha512.cpython-311-darwin.so
0x1028d4000 - 0x1028dbfff +binascii.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/binascii.cpython-311-darwin.so
0x1028e8000 - 0x1028effff +_struct.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_struct.cpython-311-darwin.so
0x102900000 - 0x102903fff +fcntl.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/fcntl.cpython-311-darwin.so
0x102910000 - 0x102913fff +_posixsubprocess.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_posixsubprocess.cpython-311-darwin.so
0x102920000 - 0x102927fff +select.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/select.cpython-311-darwin.so
0x102a34000 - 0x102a37fff +_arrays.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/arrays/_arrays.cpython-311-darwin.so
0x102a44000 - 0x102b57fff +libarrays.dylib (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/arrays/lib/libarrays.dylib
0x102b84000 - 0x102b8bfff +_json.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_json.cpython-311-darwin.so
0x102b98000 - 0x10304bfff +_multiarray_umath.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/core/_multiarray_umath.cpython-311-darwin.so
0x1031c4000 - 0x103806fff +libgfortran.5.dylib (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/.dylibs/libgfortran.5.dylib
0x103841000 - 0x10388efff +libquadmath.0.dylib (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/.dylibs/libquadmath.0.dylib
0x103898000 - 0x1038a8fff +libgcc_s.1.1.dylib (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/.dylibs/libgcc_s.1.1.dylib
0x1059ba000 - 0x1059d5fff +_pickle.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_pickle.cpython-311-darwin.so
0x105aea000 - 0x105aedfff +_contextvars.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_contextvars.cpython-311-darwin.so
0x105afa000 - 0x105b0dfff +_multiarray_tests.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/core/_multiarray_tests.cpython-311-darwin.so
0x105c26000 - 0x105c39fff +_ctypes.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_ctypes.cpython-311-darwin.so
0x105c52000 - 0x105c71fff +_umath_linalg.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/linalg/_umath_linalg.cpython-311-darwin.so
0x105d8a000 - 0x105d9dfff +_pocketfft_internal.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/fft/_pocketfft_internal.cpython-311-darwin.so
0x105daa000 - 0x105e1dfff +mtrand.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/random/mtrand.cpython-311-darwin.so
0x105e82000 - 0x105ea1fff +bit_generator.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/random/bit_generator.cpython-311-darwin.so
0x105ec6000 - 0x105ecdfff +_hashlib.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_hashlib.cpython-311-darwin.so
0x105ede000 - 0x105ee5fff +_blake2.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_blake2.cpython-311-darwin.so
0x105efe000 - 0x105f99fff dyld (852.2) /usr/lib/dyld
0x106016000 - 0x109d35fff +libopenblas64_.0.dylib (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/.dylibs/libopenblas64_.0.dylib
0x10dff6000 - 0x10e025fff +_common.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/random/_common.cpython-311-darwin.so
0x10e046000 - 0x10e26dfff +libcrypto.1.1.dylib (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/libcrypto.1.1.dylib
0x10e30e000 - 0x10e361fff +_bounded_integers.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/random/_bounded_integers.cpython-311-darwin.so
0x10e392000 - 0x10e3a1fff +_mt19937.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/random/_mt19937.cpython-311-darwin.so
0x10e3b6000 - 0x10e3c1fff +_philox.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/random/_philox.cpython-311-darwin.so
0x10e3d6000 - 0x10e3e5fff +_pcg64.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/random/_pcg64.cpython-311-darwin.so
0x10e3fa000 - 0x10e401fff +_sfc64.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/random/_sfc64.cpython-311-darwin.so
0x10e412000 - 0x10e4a1fff +_generator.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/numpy/random/_generator.cpython-311-darwin.so
0x10e60e000 - 0x10e611fff +_opcode.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/lib-dynload/_opcode.cpython-311-darwin.so
0x11071e000 - 0x110741fff +_geometry.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/geometry/_geometry.cpython-311-darwin.so
0x110c5a000 - 0x110dddfff +QtCore.abi3.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/QtCore.abi3.so
0x110fe6000 - 0x1114e9fff +QtCore (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/Qt6/lib/QtCore.framework/Versions/A/QtCore
0x1134a4000 - 0x1134bbfff +sip.cpython-311-darwin.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/sip.cpython-311-darwin.so
0x1134d4000 - 0x11377ffff +QtWidgets.abi3.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/QtWidgets.abi3.so
0x113ae4000 - 0x113f9ffff +QtWidgets (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/Qt6/lib/QtWidgets.framework/Versions/A/QtWidgets
0x1140fc000 - 0x1147a3fff +QtGui (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/Qt6/lib/QtGui.framework/Versions/A/QtGui
0x1148d0000 - 0x11495bfff +QtDBus (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/Qt6/lib/QtDBus.framework/Versions/A/QtDBus
0x114980000 - 0x114ae7fff +QtGui.abi3.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/QtGui.abi3.so
0x114fc0000 - 0x114fcffff +QtWebEngineWidgets.abi3.so (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/QtWebEngineWidgets.abi3.so
0x114fe4000 - 0x114ff7fff +QtWebEngineWidgets (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/Qt6/lib/QtWebEngineWidgets.framework/Versions/A/QtWebEngineWidgets
0x115010000 - 0x11505bfff +QtPrintSupport (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/Qt6/lib/QtPrintSupport.framework/Versions/A/QtPrintSupport
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0x11fa88000 - 0x11fe6bfff +QtQuick (0) /Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/PyQt6/Qt6/lib/QtQuick.framework/Versions/A/QtQuick
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0x7fff38cbd000 - 0x7fff38d43fff com.apple.coredav (1.0.1 - 889.0.0.4) /System/Library/PrivateFrameworks/CoreDAV.framework/Versions/A/CoreDAV
0x7fff38d44000 - 0x7fff38d99fff com.apple.ExchangeWebServices (8.0 - 814.110.1) /System/Library/PrivateFrameworks/ExchangeWebServices.framework/Versions/A/ExchangeWebServices
0x7fff38d9a000 - 0x7fff38ddafff com.apple.MediaServices (1.0 - 1) /System/Library/PrivateFrameworks/MediaServices.framework/Versions/A/MediaServices
0x7fff38ed6000 - 0x7fff38ed6fff com.apple.marco (10.0 - 1000) /System/Library/PrivateFrameworks/Marco.framework/Versions/A/Marco
0x7fff390bc000 - 0x7fff390f4fff com.apple.contacts.ContactsAutocomplete (1.0 - 1152.4) /System/Library/PrivateFrameworks/ContactsAutocomplete.framework/Versions/A/ContactsAutocomplete
0x7fff390f5000 - 0x7fff39101fff com.apple.KerberosHelper (4.0 - 1.0) /System/Library/PrivateFrameworks/KerberosHelper.framework/Versions/A/KerberosHelper
0x7fff39102000 - 0x7fff39145fff com.apple.ResponseKit (1.0 - 165.2) /System/Library/PrivateFrameworks/ResponseKit.framework/Versions/A/ResponseKit
0x7fff39146000 - 0x7fff39165fff com.apple.proactive.support.ProactiveEventTracker (1.0 - 294.7) /System/Library/PrivateFrameworks/ProactiveEventTracker.framework/Versions/A/ProactiveEventTracker
0x7fff39589000 - 0x7fff39589fff com.apple.PhoneNumbers (1.0 - 1) /System/Library/PrivateFrameworks/PhoneNumbers.framework/Versions/A/PhoneNumbers
0x7fff3958a000 - 0x7fff39591fff com.apple.URLFormatting (146 - 146.22) /System/Library/PrivateFrameworks/URLFormatting.framework/Versions/A/URLFormatting
0x7fff39592000 - 0x7fff395a0fff com.apple.accessibility.AXCoreUtilities (1.0 - 1) /System/Library/PrivateFrameworks/AXCoreUtilities.framework/Versions/A/AXCoreUtilities
0x7fff395a1000 - 0x7fff395b8fff libAccessibility.dylib (2885.49.1) /usr/lib/libAccessibility.dylib
0x7fff3bfef000 - 0x7fff3c011fff com.apple.quicklook.QuickLookSupport (1.0 - 135.5) /System/Library/PrivateFrameworks/QuickLookSupport.framework/Versions/A/QuickLookSupport
0x7fff3c012000 - 0x7fff3c0a9fff com.apple.AirPlaySync (1.0 - 2780.10.4.1.1) /System/Library/PrivateFrameworks/AirPlaySync.framework/Versions/A/AirPlaySync
0x7fff3cc3a000 - 0x7fff3ccbdfff com.apple.CorePDF (4.0 - 529) /System/Library/PrivateFrameworks/CorePDF.framework/Versions/A/CorePDF
0x7fff3ccbe000 - 0x7fff3ccc1fff com.apple.print.framework.Print (15 - 271) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Print.framework/Versions/A/Print
0x7fff3ccc2000 - 0x7fff3ccc5fff com.apple.Carbon (160 - 164) /System/Library/Frameworks/Carbon.framework/Versions/A/Carbon
0x7fff3cdbe000 - 0x7fff3cdbefff com.apple.avfoundation (2.0 - 2020.10) /System/Library/Frameworks/AVFoundation.framework/Versions/A/AVFoundation
0x7fff3cf78000 - 0x7fff3cf97fff com.apple.private.SystemPolicy (1.0 - 1) /System/Library/PrivateFrameworks/SystemPolicy.framework/Versions/A/SystemPolicy
0x7fff3d0e4000 - 0x7fff3d13afff com.apple.AccessibilitySharedSupport (1.0 - 1) /System/Library/PrivateFrameworks/AccessibilitySharedSupport.framework/Versions/A/AccessibilitySharedSupport
0x7fff3d13b000 - 0x7fff3d158fff com.apple.sidecar-core (1.0 - 231.0.3) /System/Library/PrivateFrameworks/SidecarCore.framework/Versions/A/SidecarCore
0x7fff3d159000 - 0x7fff3d15cfff com.apple.QuickLookNonBaseSystem (1.0 - 1) /System/Library/PrivateFrameworks/QuickLookNonBaseSystem.framework/Versions/A/QuickLookNonBaseSystem
0x7fff3d574000 - 0x7fff3d57afff com.apple.FeatureFlagsSupport (1.0 - 28.60.1) /System/Library/PrivateFrameworks/FeatureFlagsSupport.framework/Versions/A/FeatureFlagsSupport
0x7fff3d6eb000 - 0x7fff3d702fff com.apple.SafariServices.framework (16611 - 16611.3.10.1.19) /System/Library/Frameworks/SafariServices.framework/Versions/A/SafariServices
0x7fff3d8b5000 - 0x7fff3d8c0fff com.apple.MallocStackLogging (1.0 - 1) /System/Library/PrivateFrameworks/MallocStackLogging.framework/Versions/A/MallocStackLogging
0x7fff3d8d5000 - 0x7fff3d8e7fff libmis.dylib (274.140.2) /usr/lib/libmis.dylib
0x7fff3d8e8000 - 0x7fff3d8ebfff com.apple.gpusw.GPURawCounter (20.3 - 12.0) /System/Library/PrivateFrameworks/GPURawCounter.framework/Versions/A/GPURawCounter
0x7fff3d904000 - 0x7fff3da73fff com.apple.CoreHandwriting (161 - 1.2) /System/Library/PrivateFrameworks/CoreHandwriting.framework/Versions/A/CoreHandwriting
0x7fff3da74000 - 0x7fff3dccffff com.apple.imageKit (3.0 - 1100) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/ImageKit.framework/Versions/A/ImageKit
0x7fff3dcd0000 - 0x7fff3dde6fff com.apple.PencilKit (1.0 - 1) /System/Library/Frameworks/PencilKit.framework/Versions/A/PencilKit
0x7fff3dde7000 - 0x7fff3ddf8fff com.apple.sidecar-ui (1.0 - 231.0.3) /System/Library/PrivateFrameworks/SidecarUI.framework/Versions/A/SidecarUI
0x7fff3e41b000 - 0x7fff3e47dfff com.apple.ImageCaptureCore (1711.5.2.1 - 1711.5.2.1) /System/Library/Frameworks/ImageCaptureCore.framework/Versions/A/ImageCaptureCore
0x7fff3e47e000 - 0x7fff3e4a3fff com.apple.quartzfilters (1.10.0 - 98) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/QuartzFilters.framework/Versions/A/QuartzFilters
0x7fff3e6ef000 - 0x7fff3e851fff com.apple.MediaPlayer (1.0 - 1.0) /System/Library/Frameworks/MediaPlayer.framework/Versions/A/MediaPlayer
0x7fff3e852000 - 0x7fff3eb33fff com.apple.iTunesCloud (1.0 - 1) /System/Library/PrivateFrameworks/iTunesCloud.framework/Versions/A/iTunesCloud
0x7fff3eb5f000 - 0x7fff3ec87fff com.apple.AnnotationKit (1.0 - 383.6.1) /System/Library/PrivateFrameworks/AnnotationKit.framework/Versions/A/AnnotationKit
0x7fff3ec88000 - 0x7fff3f128fff com.apple.QuartzComposer (5.1 - 383) /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/QuartzComposer.framework/Versions/A/QuartzComposer
0x7fff3f129000 - 0x7fff3f211fff com.apple.PDFKit (1.0 - 950.40.3) /System/Library/Frameworks/PDFKit.framework/Versions/A/PDFKit
0x7fff3ff58000 - 0x7fff3ffd5fff com.apple.TextInput (1.0 - 1.0) /System/Library/PrivateFrameworks/TextInput.framework/Versions/A/TextInput
0x7fff41171000 - 0x7fff41174fff com.apple.quartzframework (1.5 - 25) /System/Library/Frameworks/Quartz.framework/Versions/A/Quartz
0x7fff41599000 - 0x7fff415b7fff libCGInterfaces.dylib (544.6) /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/Libraries/libCGInterfaces.dylib
0x7fff42c37000 - 0x7fff43997fff libfaceCore.dylib (4.3.2) /System/Library/Frameworks/Vision.framework/libfaceCore.dylib
0x7fff43998000 - 0x7fff43aabfff com.apple.TextRecognition (1.0 - 157) /System/Library/PrivateFrameworks/TextRecognition.framework/Versions/A/TextRecognition
0x7fff43aac000 - 0x7fff43ac4fff com.apple.Futhark (1.0 - 1) /System/Library/PrivateFrameworks/Futhark.framework/Versions/A/Futhark
0x7fff43b46000 - 0x7fff43db9fff com.apple.RawCamera.bundle (9.10.0 - 1450.3.1) /System/Library/CoreServices/RawCamera.bundle/Contents/MacOS/RawCamera
0x7fff44622000 - 0x7fff44626fff com.apple.DAAPKit (1.0 - 1) /System/Library/PrivateFrameworks/DAAPKit.framework/Versions/A/DAAPKit
0x7fff45f9d000 - 0x7fff45fa0fff libpmenergy.dylib (227.140.1) /usr/lib/libpmenergy.dylib
0x7fff4668c000 - 0x7fff46697fff libGPUSupportMercury.dylib (18.5.9) /System/Library/PrivateFrameworks/GPUSupport.framework/Versions/A/Libraries/libGPUSupportMercury.dylib
0x7fff47cc1000 - 0x7fff47d02fff com.apple.osanalytics.OSAnalytics (1.0 - 1) /System/Library/PrivateFrameworks/OSAnalytics.framework/Versions/A/OSAnalytics
0x7fff48550000 - 0x7fff4856bfff com.apple.network.statistics.framework (1.2 - 1) /System/Library/PrivateFrameworks/NetworkStatistics.framework/Versions/A/NetworkStatistics
0x7fff51754000 - 0x7fff51781fff com.apple.HelpData (2.3 - 201.1) /System/Library/PrivateFrameworks/HelpData.framework/Versions/A/HelpData
0x7fff51782000 - 0x7fff5179cfff com.apple.shortcut (2.16 - 118) /System/Library/PrivateFrameworks/Shortcut.framework/Versions/A/Shortcut
0x7fff5179d000 - 0x7fff5183cfff com.apple.Symbolication (12.5 - 64544.70.3) /System/Library/PrivateFrameworks/Symbolication.framework/Versions/A/Symbolication
0x7fff51a2c000 - 0x7fff51a2ffff libpmsample.dylib (227.140.1) /usr/lib/libpmsample.dylib
0x7fff540c4000 - 0x7fff540fafff com.apple.ReplayKit (1.0 - 1) /System/Library/Frameworks/ReplayKit.framework/Versions/A/ReplayKit
0x7fff556f4000 - 0x7fff556f7fff com.apple.ForceFeedback (1.0.6 - 1.0.6) /System/Library/Frameworks/ForceFeedback.framework/Versions/A/ForceFeedback
0x7fff60dc3000 - 0x7fff6148afff libclh.dylib (16.0.13) /System/Library/Extensions/GeForceGLDriver.bundle/Contents/MacOS/libclh.dylib
0x7fff6148b000 - 0x7fff61d9efff com.apple.GeForceGLDriver (16.0.13 - 16.0.0) /System/Library/Extensions/GeForceGLDriver.bundle/Contents/MacOS/GeForceGLDriver
0x7fff61e9e000 - 0x7fff61f15fff com.apple.driver.AppleIntelHD5000GraphicsMTLDriver (16.5.14 - 16.0.5) /System/Library/Extensions/AppleIntelHD5000GraphicsMTLDriver.bundle/Contents/MacOS/AppleIntelHD5000GraphicsMTLDriver
0x7fff63dfc000 - 0x7fff63f92fff com.apple.GeForceMTLDriver (16.0.13 - 16.0.0) /System/Library/Extensions/GeForceMTLDriver.bundle/Contents/MacOS/GeForceMTLDriver
0x7fff65da5000 - 0x7fff662b8fff com.apple.driver.AppleIntelHD5000GraphicsGLDriver (16.5.14 - 16.0.5) /System/Library/Extensions/AppleIntelHD5000GraphicsGLDriver.bundle/Contents/MacOS/AppleIntelHD5000GraphicsGLDriver
0x7fff697ec000 - 0x7fff697f0fff libmetal_timestamp.dylib (31001.192.1) /System/Library/PrivateFrameworks/GPUCompiler.framework/Versions/31001/Libraries/libmetal_timestamp.dylib
0x7fff6bc37000 - 0x7fff6bc3dfff libCoreFSCache.dylib (200.12) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreFSCache.dylib
0x7fff6bc3e000 - 0x7fff6bc42fff libCoreVMClient.dylib (200.12) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreVMClient.dylib
0x7fff6bc43000 - 0x7fff6bc52fff com.apple.opengl (18.5.9 - 18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL
0x7fff6bc53000 - 0x7fff6bc55fff libCVMSPluginSupport.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCVMSPluginSupport.dylib
0x7fff6bc56000 - 0x7fff6bc5efff libGFXShared.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGFXShared.dylib
0x7fff6bc5f000 - 0x7fff6bc92fff libGLImage.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLImage.dylib
0x7fff6bc93000 - 0x7fff6bccffff libGLU.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
0x7fff6bcd0000 - 0x7fff6be63fff libGLProgrammability.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLProgrammability.dylib
0x7fff6be64000 - 0x7fff6be6efff libGL.dylib (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib
0x7fff6be6f000 - 0x7fff6bfecfff GLEngine (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLEngine.bundle/GLEngine
0x7fff6bfed000 - 0x7fff6c015fff GLRendererFloat (18.5.9) /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLRendererFloat.bundle/GLRendererFloat
0x7fff6d2ae000 - 0x7fff6d306fff com.apple.opencl (4.6 - 4.6) /System/Library/Frameworks/OpenCL.framework/Versions/A/OpenCL
0x7fff6e3b0000 - 0x7fff6e3b7fff com.apple.agl (3.3.4 - AGL-3.3.3) /System/Library/Frameworks/AGL.framework/Versions/A/AGL
0x7fff6e3b8000 - 0x7fff6e49ffff com.apple.audio.AVFAudio (1.0 - 477.88) /System/Library/Frameworks/AVFAudio.framework/Versions/A/AVFAudio
0x7fff6fa25000 - 0x7fff6fa37fff com.apple.CMImaging (1.0 - 82.6) /System/Library/PrivateFrameworks/CMImaging.framework/Versions/A/CMImaging
0x7fff73d55000 - 0x7fff73d60fff com.apple.SymptomAnalytics (1.0 - 1431.140.1) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomAnalytics.framework/Versions/A/SymptomAnalytics
0x7fff73f76000 - 0x7fff73f8efff com.apple.SymptomPresentationFeed (1.0 - 1431.140.1) /System/Library/PrivateFrameworks/Symptoms.framework/Frameworks/SymptomPresentationFeed.framework/Versions/A/SymptomPresentationFeed
0x7fff7789d000 - 0x7fff778a4fff libRosetta.dylib (203.58) /usr/lib/libRosetta.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.2G resident=0K(0%) swapped_out_or_unallocated=1.2G(100%)
Writable regions: Total=8.5G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=8.5G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 384K 3
Activity Tracing 256K 1
CG backing stores 3240K 6
CG image 1868K 27
CG raster data 1644K 3
CoreAnimation 5968K 24
CoreGraphics 12K 2
CoreUI image data 3372K 27
Foundation 48K 2
Kernel Alloc Once 8K 1
MALLOC 6.6G 503
MALLOC guard page 32K 8
MALLOC_LARGE (reserved) 1.3G 11 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 128.0M 1 reserved VM address space (unallocated)
Mach message 16K 2
OpenGL GLSL 384K 4
STACK GUARD 140K 35
Stack 331.3M 36
Stack Guard 56.0M 1
VM_ALLOCATE 212.7M 187
__DATA 38.6M 646
__DATA_CONST 35.3M 313
__DATA_DIRTY 1707K 212
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 532.6M 274
__OBJC_RO 70.3M 1
__OBJC_RW 2496K 2
__TEXT 671.7M 635
__UNICODE 588K 1
mapped file 280.7M 64
shared memory 2960K 23
=========== ======= =======
TOTAL 10.2G 3057
TOTAL, minus reserved VM space 8.8G 3057
===== Log before crash start =====
Startup Messages
---
note | available bundle cache has not been initialized yet
You can double click a model's Name or ID in the model panel to edit those
fields
UCSF ChimeraX version: 1.7.1 (2024-01-23)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open 4ove format mmcif fromDatabase pdb
4ove title:
X-ray Crystal Structure of Mouse Netrin-1 [more info...]
Chain information for 4ove #1
---
Chain | Description | UniProt
A | Netrin-1 | NET1_MOUSE 23-457
Non-standard residues in 4ove #1
---
BMA — beta-D-mannopyranose
CA — calcium ion
CL — chloride ion
MAN — alpha-D-mannopyranose
NAG — 2-acetamido-2-deoxy-beta-D-glucopyranose
4ove mmCIF Assemblies
---
1| author_and_software_defined_assembly
> select /A:35-456
3309 atoms, 3409 bonds, 422 residues, 1 model selected
> sym #1 assembly 1
Made 2 copies for 4ove assembly 1
> view
> coulombic #!2.1-2
Using Amber 20 recommended default charges and atom types for standard
residues
Coulombic values for 4ove_A SES surface #2.1.2: minimum, -21.07, mean 0.70,
maximum 19.29
Coulombic values for 4ove_A SES surface #2.2.2: minimum, -21.07, mean 0.70,
maximum 19.29
To also show corresponding color key, enter the above coulombic command and
add key true
> lighting simple
> lighting full
> ui windowfill toggle
> movie record
> turn y 2 180
> wait 180
> movie encode /Users/Pauline/Desktop/movie1.mp4
Movie saved to /Users/Pauline/Desktop/movie1.mp4
> lighting soft
> close session
> open /Users/Pauline/Desktop/presentations/20240612_PSFaM/4ove_spirals.cxs
> format session
===== Log before crash end =====
Log:
Startup Messages
---
note | available bundle cache has not been initialized yet
UCSF ChimeraX version: 1.7.1 (2024-01-23)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 NVIDIA-16.0.13
OpenGL renderer: NVIDIA GeForce GT 750M OpenGL Engine
OpenGL vendor: NVIDIA Corporation
Python: 3.11.2
Locale: UTF-8
Qt version: PyQt6 6.3.1, Qt 6.3.1
Qt runtime version: 6.3.2
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro11,3
Processor Name: Quad-Core Intel Core i7
Processor Speed: 2.5 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 256 KB
L3 Cache: 6 MB
Hyper-Threading Technology: Enabled
Memory: 16 GB
System Firmware Version: 478.0.0.0.0
SMC Version (system): 2.19f12
Software:
System Software Overview:
System Version: macOS 11.7.10 (20G1427)
Kernel Version: Darwin 20.6.0
Time since boot: 6:52
Graphics/Displays:
Intel Iris Pro:
Chipset Model: Intel Iris Pro
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x0d26
Revision ID: 0x0008
Automatic Graphics Switching: Supported
gMux Version: 4.0.8 [3.2.8]
Metal Family: Supported, Metal GPUFamily macOS 1
NVIDIA GeForce GT 750M:
Chipset Model: NVIDIA GeForce GT 750M
Type: GPU
Bus: PCIe
PCIe Lane Width: x8
VRAM (Total): 2 GB
Vendor: NVIDIA (0x10de)
Device ID: 0x0fe9
Revision ID: 0x00a2
ROM Revision: 3776
Automatic Graphics Switching: Supported
gMux Version: 4.0.8 [3.2.8]
Metal Family: Supported, Metal GPUFamily macOS 1
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2880 x 1800 Retina
Framebuffer Depth: 24-Bit Color (ARGB8888)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Installed Packages:
alabaster: 0.7.16
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.4.1
Babel: 2.14.0
backcall: 0.2.0
beautifulsoup4: 4.11.2
blockdiag: 3.0.0
blosc2: 2.0.0
build: 0.10.0
certifi: 2022.12.7
cftime: 1.6.3
charset-normalizer: 3.3.2
ChimeraX-AddCharge: 1.5.13
ChimeraX-AddH: 2.2.5
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.4.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.12.2
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.1.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.49.1
ChimeraX-AtomicLibrary: 12.1.5
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.10.5
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.3.2
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.5
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.7.1
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2
ChimeraX-DistMonitor: 1.4
ChimeraX-DockPrep: 1.1.3
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-Label: 1.1.8
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.1.6
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.1
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.1.2
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.6.1
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.12.1
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.14
ChimeraX-ModelPanel: 1.4
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.1
ChimeraX-NRRD: 1.1
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.13.1
ChimeraX-PDB: 2.7.3
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.4
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.2
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.2
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.11
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.2
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.12.4
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.2
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2.2
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.33.3
ChimeraX-uniprot: 2.3
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.3.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.3
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.1
contourpy: 1.2.0
cxservices: 1.2.2
cycler: 0.12.1
Cython: 0.29.33
debugpy: 1.8.0
decorator: 5.1.1
docutils: 0.19
executing: 2.0.1
filelock: 3.9.0
fonttools: 4.47.2
funcparserlib: 2.0.0a0
glfw: 2.6.4
grako: 3.16.5
h5py: 3.10.0
html2text: 2020.1.16
idna: 3.6
ihm: 0.38
imagecodecs: 2023.9.18
imagesize: 1.4.1
ipykernel: 6.23.2
ipython: 8.14.0
ipython-genutils: 0.2.0
ipywidgets: 8.1.1
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 8.2.0
jupyter-core: 5.7.1
jupyterlab-widgets: 3.0.9
kiwisolver: 1.4.5
line-profiler: 4.0.2
lxml: 4.9.2
lz4: 4.3.2
MarkupSafe: 2.1.4
matplotlib: 3.7.2
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.6.0
netCDF4: 1.6.2
networkx: 3.1
nibabel: 5.0.1
nptyping: 2.5.0
numexpr: 2.8.8
numpy: 1.25.1
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.9.0
pickleshare: 0.7.5
pillow: 10.2.0
pip: 23.0
pkginfo: 1.9.6
platformdirs: 4.1.0
prompt-toolkit: 3.0.43
psutil: 5.9.5
ptyprocess: 0.7.0
pure-eval: 0.2.2
py-cpuinfo: 9.0.0
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.16.1
pynrrd: 1.0.0
PyOpenGL: 3.1.7
PyOpenGL-accelerate: 3.1.7
pyopenxr: 1.0.2801
pyparsing: 3.0.9
pyproject-hooks: 1.0.0
PyQt6-commercial: 6.3.1
PyQt6-Qt6: 6.3.2
PyQt6-sip: 13.4.0
PyQt6-WebEngine-commercial: 6.3.1
PyQt6-WebEngine-Qt6: 6.3.2
python-dateutil: 2.8.2
pytz: 2023.3.post1
pyzmq: 25.1.2
qtconsole: 5.4.3
QtPy: 2.4.1
RandomWords: 0.4.0
requests: 2.31.0
scipy: 1.11.1
setuptools: 67.4.0
setuptools-scm: 7.0.5
sfftk-rw: 0.7.3
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.5
sphinx: 6.1.3
sphinx-autodoc-typehints: 1.22
sphinxcontrib-applehelp: 1.0.8
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.6
sphinxcontrib-htmlhelp: 2.0.5
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.7
sphinxcontrib-serializinghtml: 1.1.10
stack-data: 0.6.3
superqt: 0.5.0
tables: 3.8.0
tcia-utils: 1.5.1
tifffile: 2023.7.18
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.4
traitlets: 5.9.0
typing-extensions: 4.9.0
tzdata: 2023.4
urllib3: 2.1.0
wcwidth: 0.2.13
webcolors: 1.12
wheel: 0.38.4
wheel-filename: 1.4.1
widgetsnbextension: 4.0.9
Change History (2)
comment:1 by , 18 months ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Core |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash in garbage collection |
comment:2 by , 18 months ago
| Resolution: | → duplicate |
|---|---|
| Status: | accepted → closed |
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