![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 16 months ago
Closed 16 months ago
#15725 closed defect (can't reproduce)
Crash getting residue atoms while writing mmCIF
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | Greg Couch | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-14.5-arm64-arm-64bit
ChimeraX Version: 1.7.1 (2024-01-23 01:58:08 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Aborted
Current thread 0x0000000203950c00 (most recent call first):
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/mmcif/__init__.py", line 123 in save
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/save_command/cmd.py", line 101 in provider_save
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/commands/cli.py", line 2908 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/save_command/cmd.py", line 86 in cmd_save
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/commands/cli.py", line 2908 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/commands/run.py", line 49 in run
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 748 in init
File "/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py", line 1069 in
File "", line 88 in _run_code
File "", line 198 in _run_module_as_main
Extension modules: chimerax.arrays._arrays, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, chimerax.atomic_lib._load_libs, tinyarray, chimerax.atomic.cymol, chimerax.atomic.cytmpl, openmm._openmm, openmm.app.internal.compiled, chimerax.surface._surface, chimerax.map._map, charset_normalizer.md, PIL._imaging, matplotlib._c_internal_utils, matplotlib._path, kiwisolver._cext, matplotlib._image, chimerax.pdb_lib._load_libs, chimerax.mmcif._mmcif, chimerax.mmcif.mmcif, chimerax.atomic._ribbons, chimerax.graphics._graphics, chimerax.pdb._pdbio, chimerax.atom_search.ast, chimerax.chem_group._chem_group, chimerax.mmcif.mmcif_write (total: 41)
{"app_name":"ChimeraX","timestamp":"2024-08-03 15:57:45.00 +0300","app_version":"","slice_uuid":"17982d98-65bc-3327-8526-577ec996453c","build_version":"","platform":1,"share_with_app_devs":1,"is_first_party":1,"bug_type":"309","os_version":"macOS 14.5 (23F79)","roots_installed":0,"incident_id":"A2E80BF7-73C7-4D2A-A0B0-45CAEF19BB4B","name":"ChimeraX"}
{
"uptime" : 95000,
"procRole" : "Unspecified",
"version" : 2,
"userID" : 501,
"deployVersion" : 210,
"modelCode" : "Mac14,5",
"coalitionID" : 1123,
"osVersion" : {
"train" : "macOS 14.5",
"build" : "23F79",
"releaseType" : "User"
},
"captureTime" : "2024-08-03 15:57:45.3485 +0300",
"codeSigningMonitor" : 1,
"incident" : "A2E80BF7-73C7-4D2A-A0B0-45CAEF19BB4B",
"pid" : 44218,
"translated" : false,
"cpuType" : "ARM-64",
"roots_installed" : 0,
"bug_type" : "309",
"procLaunch" : "2024-08-03 15:57:43.5157 +0300",
"procStartAbsTime" : 2301888750891,
"procExitAbsTime" : 2301932731043,
"procName" : "ChimeraX",
"procPath" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/bin\/ChimeraX",
"parentProc" : "python",
"parentPid" : 44216,
"coalitionName" : "com.jetbrains.pycharm",
"crashReporterKey" : "5E7188E3-4F2D-6F36-68AE-45E6BD26F901",
"responsiblePid" : 996,
"responsibleProc" : "pycharm",
"codeSigningID" : "ChimeraX",
"codeSigningTeamID" : "LWV8X224YF",
"codeSigningFlags" : 570491649,
"codeSigningValidationCategory" : 6,
"codeSigningTrustLevel" : 4294967295,
"instructionByteStream" : {"beforePC":"fyMD1f17v6n9AwCRW+D\/l78DAJH9e8Go\/w9f1sADX9YQKYDSARAA1A==","atPC":"AwEAVH8jA9X9e7+p\/QMAkVDg\/5e\/AwCR\/XvBqP8PX9bAA1\/WcAqA0g=="},
"wakeTime" : 81311,
"sleepWakeUUID" : "4A17A29B-B7B2-458F-8BD0-4F4287BCA234",
"sip" : "enabled",
"exception" : {"codes":"0x0000000000000000, 0x0000000000000000","rawCodes":[0,0],"type":"EXC_CRASH","signal":"SIGABRT"},
"termination" : {"flags":0,"code":6,"namespace":"SIGNAL","indicator":"Abort trap: 6","byProc":"ChimeraX","byPid":44218},
"asi" : {"libsystem_c.dylib":["abort() called"]},
"extMods" : {"caller":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"system":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"targeted":{"thread_create":0,"thread_set_state":0,"task_for_pid":0},"warnings":0},
"faultingThread" : 0,
"threads" : [{"triggered":true,"id":10203579,"threadState":{"x":[{"value":0},{"value":0},{"value":1},{"value":5101288088},{"value":99},{"value":120},{"value":114},{"value":2896},{"value":15288704250655443646},{"value":15288704242123507390},{"value":14757395258967641293},{"value":4294967286},{"value":5101288018},{"value":0},{"value":52},{"value":4294967280},{"value":328},{"value":8821692712},{"value":0},{"value":6},{"value":8650034176,"symbolLocation":0,"symbol":"_main_thread"},{"value":259},{"value":8650034400,"symbolLocation":224,"symbol":"_main_thread"},{"value":1},{"value":4391601712,"symbolLocation":0,"symbol":"faulthandler_handlers"},{"value":18446744073692769726},{"value":4387980788,"symbolLocation":0,"symbol":"getset_get"},{"value":4391555624,"symbolLocation":0,"symbol":"_Py_NoneStruct"},{"value":5931940688}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6907063328},"cpsr":{"value":1073745920},"fp":{"value":5101288160},"sp":{"value":5101288128},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6906833504,"matchesCrashFrame":1},"far":{"value":0}},"queue":"com.apple.main-thread","frames":[{"imageOffset":39520,"symbol":"__pthread_kill","symbolLocation":8,"imageIndex":130},{"imageOffset":27680,"symbol":"pthread_kill","symbolLocation":288,"imageIndex":131},{"imageOffset":262624,"symbol":"raise","symbolLocation":32,"imageIndex":132},{"imageOffset":2450372,"symbol":"faulthandler_fatal_error","symbolLocation":392,"imageIndex":128},{"imageOffset":17796,"symbol":"_sigtramp","symbolLocation":56,"imageIndex":133},{"imageOffset":27680,"symbol":"pthread_kill","symbolLocation":288,"imageIndex":131},{"imageOffset":485936,"symbol":"abort","symbolLocation":180,"imageIndex":132},{"imageOffset":85256,"symbol":"abort_message","symbolLocation":132,"imageIndex":134},{"imageOffset":20388,"symbol":"demangling_terminate_handler()","symbolLocation":320,"imageIndex":134},{"imageOffset":147936,"symbol":"_objc_terminate()","symbolLocation":160,"imageIndex":135},{"imageOffset":82124,"symbol":"std::__terminate(void (*)())","symbolLocation":16,"imageIndex":134},{"imageOffset":95048,"symbol":"__cxxabiv1::failed_throw(__cxxabiv1::__cxa_exception*)","symbolLocation":88,"imageIndex":134},{"imageOffset":94860,"symbol":"__cxa_throw","symbolLocation":308,"imageIndex":134},{"imageOffset":77792,"symbol":"std::__1::__throw_length_error[abi:ue170006](char const*)","symbolLocation":72,"imageIndex":136},{"imageOffset":144500,"symbol":"std::__1::__vector_base_common::__throw_length_error() const","symbolLocation":24,"imageIndex":136},{"imageOffset":101376,"symbol":"std::__1::enable_if::value && is_constructible::reference>::value, void>::type std::__1::vector>::assign(atomstruct::Bond**, atomstruct::Bond**)","symbolLocation":384,"imageIndex":65},{"imageOffset":258280,"symbol":"__pyx_getprop_8chimerax_6atomic_5cymol_9CyResidue_atoms(_object*, void*)","symbolLocation":980,"imageIndex":65},{"imageOffset":1066760,"symbol":"_PyObject_GenericGetAttrWithDict","symbolLocation":308,"imageIndex":128},{"imageOffset":445724,"symbol":"__pyx_pf_8chimerax_5mmcif_11mmcif_write_14save_structure_4atom_site_residue(_object*, _object*, _object*, _object*, _object*, _object*, _object*)","symbolLocation":204,"imageIndex":0},{"imageOffset":402884,"symbol":"__pyx_pf_8chimerax_5mmcif_11mmcif_write_14save_structure_6do_atom_site_model(_object*, _object*, _object*, _object*)","symbolLocation":2024,"imageIndex":0},{"imageOffset":251500,"symbol":"__pyx_pf_8chimerax_5mmcif_11mmcif_write_12save_structure(_object*, _object*, _object*, _object*, _object*, _object*, _object*, _object*, _object*, _object*, _object*, _object*)","symbolLocation":147956,"imageIndex":0},{"imageOffset":102172,"symbol":"__pyx_pw_8chimerax_5mmcif_11mmcif_write_13save_structure(_object*, _object*, _object*)","symbolLocation":168,"imageIndex":0},{"imageOffset":1038912,"symbol":"cfunction_call","symbolLocation":60,"imageIndex":128},{"imageOffset":79524,"symbol":"__pyx_pf_8chimerax_5mmcif_11mmcif_write_4write_mmcif(_object*, _object*, _object*, _object*, _object*, _object*, _object*, _object*, _object*, _object*, _object*)","symbolLocation":23188,"imageIndex":0},{"imageOffset":55764,"symbol":"__pyx_pw_8chimerax_5mmcif_11mmcif_write_5write_mmcif(_object*, _object*, _object*)","symbolLocation":152,"imageIndex":0},{"imageOffset":1038912,"symbol":"cfunction_call","symbolLocation":60,"imageIndex":128},{"imageOffset":633156,"symbol":"_PyObject_Call","symbolLocation":124,"imageIndex":128},{"imageOffset":1832920,"symbol":"_PyEval_EvalFrameDefault","symbolLocation":64136,"imageIndex":128},{"imageOffset":1844972,"symbol":"_PyEval_Vector","symbolLocation":156,"imageIndex":128},{"imageOffset":645592,"symbol":"method_vectorcall","symbolLocation":164,"imageIndex":128},{"imageOffset":1832920,"symbol":"_PyEval_EvalFrameDefault","symbolLocation":64136,"imageIndex":128},{"imageOffset":1844972,"symbol":"_PyEval_Vector","symbolLocation":156,"imageIndex":128},{"imageOffset":631980,"symbol":"_PyVectorcall_Call","symbolLocation":116,"imageIndex":128},{"imageOffset":1832920,"symbol":"_PyEval_EvalFrameDefault","symbolLocation":64136,"imageIndex":128},{"imageOffset":1844972,"symbol":"_PyEval_Vector","symbolLocation":156,"imageIndex":128},{"imageOffset":631980,"symbol":"_PyVectorcall_Call","symbolLocation":116,"imageIndex":128},{"imageOffset":1832920,"symbol":"_PyEval_EvalFrameDefault","symbolLocation":64136,"imageIndex":128},{"imageOffset":1764036,"symbol":"PyEval_EvalCode","symbolLocation":276,"imageIndex":128},{"imageOffset":1741600,"symbol":"builtin_exec","symbolLocation":428,"imageIndex":128},{"imageOffset":1041488,"symbol":"cfunction_vectorcall_FASTCALL_KEYWORDS","symbolLocation":80,"imageIndex":128},{"imageOffset":1821600,"symbol":"_PyEval_EvalFrameDefault","symbolLocation":52816,"imageIndex":128},{"imageOffset":1844972,"symbol":"_PyEval_Vector","symbolLocation":156,"imageIndex":128},{"imageOffset":2422240,"symbol":"pymain_run_module","symbolLocation":256,"imageIndex":128},{"imageOffset":2420864,"symbol":"Py_RunMain","symbolLocation":1784,"imageIndex":128},{"imageOffset":2425392,"symbol":"pymain_main","symbolLocation":52,"imageIndex":128},{"imageOffset":2425328,"symbol":"Py_Main","symbolLocation":36,"imageIndex":128},{"imageOffset":15700,"symbol":"main","symbolLocation":128,"imageIndex":129},{"imageOffset":24800,"symbol":"start","symbolLocation":2360,"imageIndex":137}]},{"id":10203580,"frames":[{"imageOffset":5828,"symbol":"mach_absolute_time","symbolLocation":112,"imageIndex":130},{"imageOffset":12504,"symbol":"__commpage_gettimeofday_internal","symbolLocation":44,"imageIndex":130},{"imageOffset":28116,"symbol":"gettimeofday","symbolLocation":56,"imageIndex":132},{"imageOffset":1491464,"symbol":"blas_thread_server","symbolLocation":276,"imageIndex":107},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":131},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":131}],"threadState":{"x":[{"value":2447398642642},{"value":18446743928243637054},{"value":3},{"value":68719460488},{"value":0},{"value":105553138417760},{"value":4442505216},{"value":4442505216},{"value":0},{"value":268435456},{"value":3595316336},{"value":73428055067040240},{"value":24000000},{"value":95540},{"value":16},{"value":105553138417664},{"value":6906806436,"symbolLocation":0,"symbol":"__commpage_gettimeofday"},{"value":8821692424},{"value":0},{"value":0},{"value":6099038048},{"value":2301932632540},{"value":68719460640},{"value":2},{"value":4505554944,"symbolLocation":0,"symbol":"thread_status"},{"value":4505554952,"symbolLocation":8,"symbol":"thread_status"},{"value":1000},{"value":4505473024,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6906806488},"cpsr":{"value":1610616832},"fp":{"value":6099037952},"sp":{"value":6099037920},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6906799812},"far":{"value":0}}},{"id":10203581,"frames":[{"imageOffset":5824,"symbol":"mach_absolute_time","symbolLocation":108,"imageIndex":130},{"imageOffset":12504,"symbol":"__commpage_gettimeofday_internal","symbolLocation":44,"imageIndex":130},{"imageOffset":28116,"symbol":"gettimeofday","symbolLocation":56,"imageIndex":132},{"imageOffset":1491464,"symbol":"blas_thread_server","symbolLocation":276,"imageIndex":107},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":131},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":131}],"threadState":{"x":[{"value":6099611488},{"value":18446743928243637054},{"value":3},{"value":68719460488},{"value":0},{"value":105553138417784},{"value":4408950784},{"value":4408950784},{"value":0},{"value":268435456},{"value":3595316336},{"value":73430360741785908},{"value":24000000},{"value":95543},{"value":16},{"value":105553138417664},{"value":6906806436,"symbolLocation":0,"symbol":"__commpage_gettimeofday"},{"value":8821692424},{"value":0},{"value":0},{"value":6099611488},{"value":2301932632540},{"value":68719460640},{"value":2},{"value":4505555072,"symbolLocation":128,"symbol":"thread_status"},{"value":4505555080,"symbolLocation":136,"symbol":"thread_status"},{"value":1000},{"value":4505473024,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6906806488},"cpsr":{"value":1610616832},"fp":{"value":6099611392},"sp":{"value":6099611360},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6906799808},"far":{"value":0}}},{"id":10203582,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":130},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":131},{"imageOffset":1491548,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":107},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":131},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":131}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":6100184776},{"value":0},{"value":4505555240,"symbolLocation":296,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8821692640},{"value":0},{"value":4505555216,"symbolLocation":272,"symbol":"thread_status"},{"value":4505555280,"symbolLocation":336,"symbol":"thread_status"},{"value":6100185312},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4505473024,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6907065692},"cpsr":{"value":1610616832},"fp":{"value":6100184896},"sp":{"value":6100184752},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6906812908},"far":{"value":0}}},{"id":10203583,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":130},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":131},{"imageOffset":1491548,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":107},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":131},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":131}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":6100758216},{"value":0},{"value":4505555368,"symbolLocation":424,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8821692640},{"value":0},{"value":4505555344,"symbolLocation":400,"symbol":"thread_status"},{"value":4505555408,"symbolLocation":464,"symbol":"thread_status"},{"value":6100758752},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4505473024,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6907065692},"cpsr":{"value":1610616832},"fp":{"value":6100758336},"sp":{"value":6100758192},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6906812908},"far":{"value":0}}},{"id":10203584,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":130},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":131},{"imageOffset":1491548,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":107},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":131},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":131}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":6101331656},{"value":0},{"value":4505555496,"symbolLocation":552,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8821692640},{"value":0},{"value":4505555472,"symbolLocation":528,"symbol":"thread_status"},{"value":4505555536,"symbolLocation":592,"symbol":"thread_status"},{"value":6101332192},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4505473024,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6907065692},"cpsr":{"value":1610616832},"fp":{"value":6101331776},"sp":{"value":6101331632},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6906812908},"far":{"value":0}}},{"id":10203585,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":130},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":131},{"imageOffset":1491548,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":107},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":131},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":131}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":6101905096},{"value":0},{"value":4505555624,"symbolLocation":680,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8821692640},{"value":0},{"value":4505555600,"symbolLocation":656,"symbol":"thread_status"},{"value":4505555664,"symbolLocation":720,"symbol":"thread_status"},{"value":6101905632},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4505473024,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6907065692},"cpsr":{"value":1610616832},"fp":{"value":6101905216},"sp":{"value":6101905072},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6906812908},"far":{"value":0}}},{"id":10203586,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":130},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":131},{"imageOffset":1491548,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":107},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":131},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":131}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":6102478536},{"value":0},{"value":4505555752,"symbolLocation":808,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8821692640},{"value":0},{"value":4505555728,"symbolLocation":784,"symbol":"thread_status"},{"value":4505555792,"symbolLocation":848,"symbol":"thread_status"},{"value":6102479072},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4505473024,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6907065692},"cpsr":{"value":1610616832},"fp":{"value":6102478656},"sp":{"value":6102478512},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6906812908},"far":{"value":0}}},{"id":10203587,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":130},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":131},{"imageOffset":1491548,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":107},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":131},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":131}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":6103051976},{"value":0},{"value":4505555880,"symbolLocation":936,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8821692640},{"value":0},{"value":4505555856,"symbolLocation":912,"symbol":"thread_status"},{"value":4505555920,"symbolLocation":976,"symbol":"thread_status"},{"value":6103052512},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4505473024,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6907065692},"cpsr":{"value":1610616832},"fp":{"value":6103052096},"sp":{"value":6103051952},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6906812908},"far":{"value":0}}},{"id":10203588,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":130},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":131},{"imageOffset":1491548,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":107},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":131},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":131}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":6103625416},{"value":0},{"value":4505556008,"symbolLocation":1064,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8821692640},{"value":0},{"value":4505555984,"symbolLocation":1040,"symbol":"thread_status"},{"value":4505556048,"symbolLocation":1104,"symbol":"thread_status"},{"value":6103625952},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4505473024,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6907065692},"cpsr":{"value":1610616832},"fp":{"value":6103625536},"sp":{"value":6103625392},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6906812908},"far":{"value":0}}},{"id":10203589,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":130},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":131},{"imageOffset":1491548,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":107},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":131},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":131}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":6104198856},{"value":0},{"value":4505556136,"symbolLocation":1192,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8821692640},{"value":0},{"value":4505556112,"symbolLocation":1168,"symbol":"thread_status"},{"value":4505556176,"symbolLocation":1232,"symbol":"thread_status"},{"value":6104199392},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4505473024,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6907065692},"cpsr":{"value":1610616832},"fp":{"value":6104198976},"sp":{"value":6104198832},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6906812908},"far":{"value":0}}},{"id":10203590,"frames":[{"imageOffset":18924,"symbol":"__psynch_cvwait","symbolLocation":8,"imageIndex":130},{"imageOffset":30044,"symbol":"_pthread_cond_wait","symbolLocation":1228,"imageIndex":131},{"imageOffset":1491548,"symbol":"blas_thread_server","symbolLocation":360,"imageIndex":107},{"imageOffset":28564,"symbol":"_pthread_start","symbolLocation":136,"imageIndex":131},{"imageOffset":7476,"symbol":"thread_start","symbolLocation":8,"imageIndex":131}],"threadState":{"x":[{"value":260},{"value":0},{"value":0},{"value":0},{"value":0},{"value":160},{"value":0},{"value":0},{"value":6104772296},{"value":0},{"value":4505556264,"symbolLocation":1320,"symbol":"thread_status"},{"value":2},{"value":0},{"value":0},{"value":0},{"value":0},{"value":305},{"value":8821692640},{"value":0},{"value":4505556240,"symbolLocation":1296,"symbol":"thread_status"},{"value":4505556304,"symbolLocation":1360,"symbol":"thread_status"},{"value":6104772832},{"value":0},{"value":0},{"value":0},{"value":1},{"value":256},{"value":4505473024,"symbolLocation":16,"symbol":"gemm_driver.level3_lock"},{"value":1}],"flavor":"ARM_THREAD_STATE64","lr":{"value":6907065692},"cpsr":{"value":1610616832},"fp":{"value":6104772416},"sp":{"value":6104772272},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6906812908},"far":{"value":0}}},{"id":10203592,"frames":[{"imageOffset":7456,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":131}],"threadState":{"x":[{"value":6105346048},{"value":8707},{"value":6104809472},{"value":0},{"value":409604},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":6105346048},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6907043104},"far":{"value":0}}},{"id":10203593,"frames":[{"imageOffset":7456,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":131}],"threadState":{"x":[{"value":6105919488},{"value":10755},{"value":6105382912},{"value":0},{"value":409604},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":6105919488},"esr":{"value":1442840704,"description":" Address size fault"},"pc":{"value":6907043104},"far":{"value":0}}},{"id":10203594,"frames":[{"imageOffset":7456,"symbol":"start_wqthread","symbolLocation":0,"imageIndex":131}],"threadState":{"x":[{"value":6106492928},{"value":0},{"value":6105956352},{"value":0},{"value":278532},{"value":18446744073709551615},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0},{"value":0}],"flavor":"ARM_THREAD_STATE64","lr":{"value":0},"cpsr":{"value":4096},"fp":{"value":0},"sp":{"value":6106492928},"esr":{"value":0,"description":" Address size fault"},"pc":{"value":6907043104},"far":{"value":0}}}],
"usedImages" : [
{
"source" : "P",
"arch" : "arm64",
"base" : 5929943040,
"size" : 491520,
"uuid" : "9bebe2d9-47eb-3405-9525-9235ec89c336",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/mmcif\/mmcif_write.cpython-311-darwin.so",
"name" : "mmcif_write.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5922078720,
"size" : 65536,
"uuid" : "0bee7e1a-a1b1-3566-b414-41228b28fa22",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/chem_group\/_chem_group.cpython-311-darwin.so",
"name" : "_chem_group.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5921144832,
"size" : 49152,
"uuid" : "0f462cab-cbcb-36cb-997f-115fe9ccb557",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atom_search\/ast.cpython-311-darwin.so",
"name" : "ast.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5922308096,
"size" : 147456,
"uuid" : "5a2b6b64-a47f-3db0-ab01-431ecbd91adc",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/pdb\/_pdbio.cpython-311-darwin.so",
"name" : "_pdbio.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5921357824,
"size" : 16384,
"uuid" : "c6a281ef-ea77-3112-b60f-3ba42ef746a3",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/graphics\/_graphics.cpython-311-darwin.so",
"name" : "_graphics.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5921505280,
"size" : 81920,
"uuid" : "ca210bb5-f097-35be-8ba3-fdf37d126290",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/_ribbons.cpython-311-darwin.so",
"name" : "_ribbons.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5919211520,
"size" : 409600,
"uuid" : "2928697f-2e6b-3060-b1b4-d35df94e80f3",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/mmcif\/_mmcif.cpython-311-darwin.so",
"name" : "_mmcif.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5920538624,
"size" : 393216,
"uuid" : "366d6590-2e68-3687-b55d-4272d961e674",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/mmcif\/mmcif.cpython-311-darwin.so",
"name" : "mmcif.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5345542144,
"size" : 16384,
"uuid" : "9ff2d75b-0926-38a8-8ae4-f7d8083912f6",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/pdb_lib\/_load_libs.cpython-311-darwin.so",
"name" : "_load_libs.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5367463936,
"size" : 32768,
"uuid" : "44abc1ff-9796-31fb-b1fb-8edd917882b0",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/pdb_lib\/lib\/libpdbconnect.dylib",
"name" : "libpdbconnect.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5361238016,
"size" : 114688,
"uuid" : "e6ffba60-1eda-380f-a051-4f83b7b45682",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/_image.cpython-311-darwin.so",
"name" : "_image.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5360959488,
"size" : 114688,
"uuid" : "7d718d62-a2e1-318a-8f9d-9b2ac2293986",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/kiwisolver\/_cext.cpython-311-darwin.so",
"name" : "_cext.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5366644736,
"size" : 589824,
"uuid" : "aec6d0d4-f857-3018-85ce-133874a4b08d",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/ft2font.cpython-311-darwin.so",
"name" : "ft2font.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5349507072,
"size" : 114688,
"uuid" : "e9743c2d-03a4-3c97-ae46-3f5280d549de",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/_path.cpython-311-darwin.so",
"name" : "_path.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5328764928,
"size" : 16384,
"uuid" : "14d474e1-d125-33c5-b490-939215edbf6a",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/_c_internal_utils.cpython-311-darwin.so",
"name" : "_c_internal_utils.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5320589312,
"size" : 16384,
"uuid" : "4a40a5ba-e9fb-303f-a6d9-68921da708c6",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/termios.cpython-311-darwin.so",
"name" : "termios.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5348933632,
"size" : 376832,
"uuid" : "fa759a83-75df-39b3-bcd0-d56be2c5f990",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/_imaging.cpython-311-darwin.so",
"name" : "_imaging.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5361467392,
"size" : 638976,
"uuid" : "3af91d50-fbcb-3163-b22a-844f037c9dec",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libtiff.6.dylib",
"name" : "libtiff.6.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5362237440,
"size" : 491520,
"uuid" : "9e01758b-f94f-3fd5-9fb2-1f4a0658e40d",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libjpeg.62.4.0.dylib",
"name" : "libjpeg.62.4.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5362827264,
"size" : 573440,
"uuid" : "53b5b416-bf14-34ef-bf14-6eda6463dc08",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libopenjp2.2.5.0.dylib",
"name" : "libopenjp2.2.5.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5313822720,
"size" : 114688,
"uuid" : "bfa4911d-984e-3da1-8e39-5864b02446aa",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libz.1.3.dylib",
"name" : "libz.1.3.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5345247232,
"size" : 163840,
"uuid" : "2ea3287b-fe9f-3300-a518-8e6a03ac0604",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libxcb.1.1.0.dylib",
"name" : "libxcb.1.1.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5352636416,
"size" : 245760,
"uuid" : "6dca2bd0-9651-375e-9c03-c59bf1e6ecf4",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/liblzma.5.dylib",
"name" : "liblzma.5.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5318295552,
"size" : 16384,
"uuid" : "4bd971f4-a1e9-3a0c-afe5-76d515f0318b",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libXau.6.0.0.dylib",
"name" : "libXau.6.0.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5344854016,
"size" : 262144,
"uuid" : "7ce173cc-3758-37ab-a7c7-cb8942e2faae",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_decimal.cpython-311-darwin.so",
"name" : "_decimal.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5309218816,
"size" : 16384,
"uuid" : "a511a8ee-5cdb-3736-8e45-c9e7917a2778",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_uuid.cpython-311-darwin.so",
"name" : "_uuid.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5320474624,
"size" : 32768,
"uuid" : "8b573d34-7c5f-326a-be21-c2a62b69b082",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_multibytecodec.cpython-311-darwin.so",
"name" : "_multibytecodec.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5347737600,
"size" : 1114112,
"uuid" : "ad37eeeb-5f8a-3574-8a1a-0e8d01b481f9",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/unicodedata.cpython-311-darwin.so",
"name" : "unicodedata.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5329911808,
"size" : 147456,
"uuid" : "3a5bf6ce-7cc0-327a-8ff1-52f7adac24a4",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/charset_normalizer\/md__mypyc.cpython-311-darwin.so",
"name" : "md__mypyc.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5293080576,
"size" : 16384,
"uuid" : "89141903-d9ce-369c-b76f-2f794585b0e3",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/charset_normalizer\/md.cpython-311-darwin.so",
"name" : "md.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5334499328,
"size" : 409600,
"uuid" : "5f2b45c0-17ea-3120-8735-60c21640bee2",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/map\/_map.cpython-311-darwin.so",
"name" : "_map.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5072912384,
"size" : 32768,
"uuid" : "928e4872-fb23-3179-ab28-a0703eeacaf3",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/lib_symmetry.dylib",
"name" : "lib_symmetry.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5353013248,
"size" : 4472832,
"uuid" : "4e93cf8a-3cff-3314-a147-d7588f752cff",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/clipper_python.cpython-311-darwin.so",
"name" : "clipper_python.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5349720064,
"size" : 1409024,
"uuid" : "c38bbb4a-a92b-3566-8624-76c6348adf6d",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/libclipper.dylib",
"name" : "libclipper.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5315723264,
"size" : 245760,
"uuid" : "c3865512-d750-3117-847d-2194b3a17e9a",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/libclipper_cx.dylib",
"name" : "libclipper_cx.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5343543296,
"size" : 655360,
"uuid" : "b2b5054b-8abe-3321-9f13-a1e4708a7016",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/libmmdb2.dylib",
"name" : "libmmdb2.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5316378624,
"size" : 180224,
"uuid" : "8de57ee0-c25c-3471-a59e-560a7265901c",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/libccp4.dylib",
"name" : "libccp4.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5313560576,
"size" : 147456,
"uuid" : "4decd63a-8399-3dde-b9bd-0b6baaacf7d2",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/surface\/_surface.cpython-311-darwin.so",
"name" : "_surface.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5330173952,
"size" : 491520,
"uuid" : "838f3b24-1a97-3a54-a2ed-db9efc277c80",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/libmolc.dylib",
"name" : "libmolc.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5309005824,
"size" : 114688,
"uuid" : "2636e864-bbd2-36cc-b229-27e7e64e6288",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/openmm\/app\/internal\/compiled.cpython-311-darwin.so",
"name" : "compiled.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5309300736,
"size" : 49152,
"uuid" : "88187fcd-b81e-38fa-b79f-b4a1eead0464",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_elementtree.cpython-311-darwin.so",
"name" : "_elementtree.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5317623808,
"size" : 458752,
"uuid" : "b9f0fa3a-7b55-3d41-bdf5-f73c0166d80e",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/plugins\/libOpenMMAmoebaReference.dylib",
"name" : "libOpenMMAmoebaReference.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5081268224,
"size" : 49152,
"uuid" : "288c8c3b-7f38-3568-a5c7-5b260ac83337",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/plugins\/libOpenMMDrudeReference.dylib",
"name" : "libOpenMMDrudeReference.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5055889408,
"size" : 180224,
"uuid" : "d779ade2-dbaa-35de-bfce-b70dfab99c21",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/plugins\/libOpenMMRPMDReference.dylib",
"name" : "libOpenMMRPMDReference.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5316673536,
"size" : 819200,
"uuid" : "d4ea25d8-3107-3e51-adf1-3de6bd087b59",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/plugins\/libOpenMMAmoebaOpenCL.dylib",
"name" : "libOpenMMAmoebaOpenCL.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5292916736,
"size" : 81920,
"uuid" : "1e07b6b0-20f3-32e4-9755-2ec88a5977f7",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/plugins\/libOpenMMDrudeOpenCL.dylib",
"name" : "libOpenMMDrudeOpenCL.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5312643072,
"size" : 786432,
"uuid" : "f7c6d224-e40d-3588-bc37-fc3adfeab0f6",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/plugins\/libOpenMMAmoebaMetal.dylib",
"name" : "libOpenMMAmoebaMetal.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5292769280,
"size" : 65536,
"uuid" : "65f50420-30f1-38d5-bc58-9b9f38058b67",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/plugins\/libOpenMMDrudeMetal.dylib",
"name" : "libOpenMMDrudeMetal.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5292605440,
"size" : 81920,
"uuid" : "71356ce6-4e63-38c5-9b24-2e72729d01f9",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/plugins\/libOpenMMRPMDOpenCL.dylib",
"name" : "libOpenMMRPMDOpenCL.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5074059264,
"size" : 81920,
"uuid" : "f537219c-8f3f-34ff-a0a4-b7f698fca73f",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/plugins\/libOpenMMRPMDMetal.dylib",
"name" : "libOpenMMRPMDMetal.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5323472896,
"size" : 1736704,
"uuid" : "e42a167c-c8b9-36e0-8f47-29f650dbf95e",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/plugins\/libOpenMMOpenCL.dylib",
"name" : "libOpenMMOpenCL.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5320671232,
"size" : 2392064,
"uuid" : "13541c96-8b6e-358f-be6b-dc44c3da449d",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/plugins\/libOpenMMMetal.dylib",
"name" : "libOpenMMMetal.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5314052096,
"size" : 360448,
"uuid" : "ea7f20fe-b418-3539-b19a-dea10a527734",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/plugins\/libOpenMMCPU.dylib",
"name" : "libOpenMMCPU.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5080858624,
"size" : 278528,
"uuid" : "e6443cf5-703e-3350-b548-a52a27985589",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/plugins\/libOpenMMPME.dylib",
"name" : "libOpenMMPME.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5309448192,
"size" : 2392064,
"uuid" : "cb33c0c1-097b-37f6-b661-a638b15c5236",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/openmm\/_openmm.cpython-311-darwin.so",
"name" : "_openmm.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5303205888,
"size" : 2539520,
"uuid" : "929fff8a-63c6-35c5-a670-b20b8a5c07b5",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/libOpenMM.8.0.dylib",
"name" : "libOpenMM.8.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5072535552,
"size" : 196608,
"uuid" : "d2f10c18-a6a6-3ec7-973a-f7be6bc0663c",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/libOpenMMAmoeba.dylib",
"name" : "libOpenMMAmoeba.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5041405952,
"size" : 49152,
"uuid" : "27e83aa9-6c95-379a-b7ce-243b2a629e40",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/libOpenMMRPMD.dylib",
"name" : "libOpenMMRPMD.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5057282048,
"size" : 81920,
"uuid" : "c543a16d-57e2-3d60-a57f-57b7ce544045",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/lib\/libOpenMMDrude.dylib",
"name" : "libOpenMMDrude.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4403789824,
"size" : 16384,
"uuid" : "f7ba4378-2a5b-36d2-902f-e798b7325903",
"path" : "\/Users\/USER\/Library\/Application Support\/ChimeraX\/*\/lib_geometry.dylib",
"name" : "lib_geometry.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4811767808,
"size" : 16384,
"uuid" : "7b60d152-04cc-30ca-a3f6-b5d86b64ecf7",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_scproxy.cpython-311-darwin.so",
"name" : "_scproxy.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5041176576,
"size" : 98304,
"uuid" : "3a5a190b-fc0a-39eb-ba02-be06478716b0",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_ssl.cpython-311-darwin.so",
"name" : "_ssl.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5301600256,
"size" : 344064,
"uuid" : "4e6b219e-bf30-3df3-85b7-610d60f656b7",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/libssl.1.1.dylib",
"name" : "libssl.1.1.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4483891200,
"size" : 49152,
"uuid" : "1c6a901e-3bd4-333f-9fa3-1a8d8f9ff77e",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/cytmpl.cpython-311-darwin.so",
"name" : "cytmpl.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4811522048,
"size" : 98304,
"uuid" : "12f930bf-d331-3ae7-88cb-fbf14c2f66f7",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/tinyarray.cpython-311-darwin.so",
"name" : "tinyarray.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5055299584,
"size" : 360448,
"uuid" : "3292e9a5-35f4-34f7-bedd-44d4fe654726",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/cymol.cpython-311-darwin.so",
"name" : "cymol.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5072093184,
"size" : 180224,
"uuid" : "1aee9034-9e5a-39f4-87c9-eb4247ed6228",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/libmolc.dylib",
"name" : "libmolc.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4405067776,
"size" : 16384,
"uuid" : "ee5de621-929f-30ef-9fb4-c8736e0dfefa",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/_load_libs.cpython-311-darwin.so",
"name" : "_load_libs.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5289803776,
"size" : 1097728,
"uuid" : "58511381-1914-3013-a4b2-e1766a98acca",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/lib\/libatomstruct.dylib",
"name" : "libatomstruct.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4484153344,
"size" : 32768,
"uuid" : "40b611e5-82c0-3f8f-9d6f-1ed12f5783ef",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/lib\/libelement.dylib",
"name" : "libelement.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4484055040,
"size" : 16384,
"uuid" : "81bf5cb5-d040-3a68-9cc6-b131f5aa1558",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/lib\/libpyinstance.dylib",
"name" : "libpyinstance.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5068636160,
"size" : 1523712,
"uuid" : "49a67d08-4e0f-3fda-b632-938edd1d0aeb",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtGui.abi3.so",
"name" : "QtGui.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5074255872,
"size" : 3047424,
"uuid" : "b2d23268-944f-3492-8cfd-24699ae18bab",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWidgets.abi3.so",
"name" : "QtWidgets.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5283856384,
"size" : 4521984,
"uuid" : "1cb5b95a-41b5-3897-a39d-1305dac761eb",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWidgets.framework\/Versions\/A\/QtWidgets",
"name" : "QtWidgets"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5061279744,
"size" : 6127616,
"uuid" : "e75b517e-89e1-3643-b4d3-2e8e02322b44",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtGui.framework\/Versions\/A\/QtGui",
"name" : "QtGui"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5040504832,
"size" : 524288,
"uuid" : "fc3e2db1-0a3b-3154-9e8d-8cab4fec51c2",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtDBus.framework\/Versions\/A\/QtDBus",
"name" : "QtDBus"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4484300800,
"size" : 81920,
"uuid" : "fef41af7-06b8-3ab4-916a-45896fe5124e",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/sip.cpython-311-darwin.so",
"name" : "sip.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5057478656,
"size" : 1654784,
"uuid" : "fc338cc4-c4ac-3763-85b1-52ada2adfe1a",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtCore.abi3.so",
"name" : "QtCore.abi3.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 5049942016,
"size" : 4587520,
"uuid" : "7b11213a-bd62-384b-9835-2bf9bacff4a0",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtCore.framework\/Versions\/A\/QtCore",
"name" : "QtCore"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4403691520,
"size" : 32768,
"uuid" : "85161575-fc7c-3438-a17b-556992adbf85",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_csv.cpython-311-darwin.so",
"name" : "_csv.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4403937280,
"size" : 16384,
"uuid" : "4f064171-dbde-3ea9-b3ec-10e8f2279ab8",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/grp.cpython-311-darwin.so",
"name" : "grp.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4403855360,
"size" : 16384,
"uuid" : "05bf27fd-ae65-3f9b-a9bc-60e1a55f235b",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_queue.cpython-311-darwin.so",
"name" : "_queue.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4402331648,
"size" : 16384,
"uuid" : "a4ccaebc-cd8e-3e0f-93f9-ab64654541d6",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_heapq.cpython-311-darwin.so",
"name" : "_heapq.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4402200576,
"size" : 49152,
"uuid" : "96a05d6a-f643-31ca-8bc9-ce9d8944518f",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/array.cpython-311-darwin.so",
"name" : "array.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4399611904,
"size" : 65536,
"uuid" : "ff9b635a-2b5e-3fd7-8cb6-7d4034f89c1a",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_socket.cpython-311-darwin.so",
"name" : "_socket.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4401922048,
"size" : 163840,
"uuid" : "98edb335-0da2-3674-9c7c-5763f333ad89",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/pyexpat.cpython-311-darwin.so",
"name" : "pyexpat.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4402413568,
"size" : 114688,
"uuid" : "ceb68656-074b-3a4b-8fc4-1e27f920915c",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/geometry\/_geometry.cpython-311-darwin.so",
"name" : "_geometry.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4379328512,
"size" : 16384,
"uuid" : "21e46472-c44e-3c20-ab90-3973c74d2217",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_opcode.cpython-311-darwin.so",
"name" : "_opcode.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4396466176,
"size" : 557056,
"uuid" : "f7f4b7b3-b3c4-30d1-84f0-ba6db989789f",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_generator.cpython-311-darwin.so",
"name" : "_generator.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4396204032,
"size" : 32768,
"uuid" : "0df31c11-413f-3562-89ee-9672708f742d",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_sfc64.cpython-311-darwin.so",
"name" : "_sfc64.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4396056576,
"size" : 65536,
"uuid" : "0c5d8427-6315-3ba1-ba90-0255ecc0bbef",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_pcg64.cpython-311-darwin.so",
"name" : "_pcg64.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4396335104,
"size" : 49152,
"uuid" : "9a8cf74a-132c-38f2-9fa3-7c5d29311bf3",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_philox.cpython-311-darwin.so",
"name" : "_philox.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4379181056,
"size" : 65536,
"uuid" : "12eedeb9-516c-3d71-b5e6-7fd6aea8da5a",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_mt19937.cpython-311-darwin.so",
"name" : "_mt19937.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4398153728,
"size" : 311296,
"uuid" : "18083d77-bde4-3c90-903f-f408e11c0623",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_bounded_integers.cpython-311-darwin.so",
"name" : "_bounded_integers.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4395958272,
"size" : 32768,
"uuid" : "e77a6a07-ad6e-3f49-91b0-369f797e514f",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_blake2.cpython-311-darwin.so",
"name" : "_blake2.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4387176448,
"size" : 32768,
"uuid" : "d978fb06-bf91-338f-a1d5-1823ce0b7d10",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_hashlib.cpython-311-darwin.so",
"name" : "_hashlib.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4476059648,
"size" : 1687552,
"uuid" : "84b63a87-8781-3cf7-be79-8ef1c4a18a64",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/libcrypto.1.1.dylib",
"name" : "libcrypto.1.1.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4378886144,
"size" : 196608,
"uuid" : "1cf7d746-f6f1-3ffb-9eb1-90f5252a9a2d",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_common.cpython-311-darwin.so",
"name" : "_common.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4395712512,
"size" : 131072,
"uuid" : "b4528ca8-922a-3641-92fb-e2ad94d8ce67",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/bit_generator.cpython-311-darwin.so",
"name" : "bit_generator.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4397367296,
"size" : 458752,
"uuid" : "d04c911e-6670-3a36-9980-b7f4f8fc4bbe",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/mtrand.cpython-311-darwin.so",
"name" : "mtrand.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4377772032,
"size" : 65536,
"uuid" : "cc42b407-bdfb-35b3-9eec-0d41d2cb7749",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/fft\/_pocketfft_internal.cpython-311-darwin.so",
"name" : "_pocketfft_internal.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4377559040,
"size" : 98304,
"uuid" : "a0e070e7-6714-34c7-bffc-4413ba27c6f9",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/linalg\/_umath_linalg.cpython-311-darwin.so",
"name" : "_umath_linalg.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4378689536,
"size" : 81920,
"uuid" : "a0c8f8cf-4aa8-3f38-a339-70543d6296d0",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_ctypes.cpython-311-darwin.so",
"name" : "_ctypes.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4378132480,
"size" : 65536,
"uuid" : "b82882d8-5f3a-3451-a134-3b09469ff97b",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/core\/_multiarray_tests.cpython-311-darwin.so",
"name" : "_multiarray_tests.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4372201472,
"size" : 16384,
"uuid" : "68aa1776-c714-3b92-bd40-c140c5a0b5be",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_contextvars.cpython-311-darwin.so",
"name" : "_contextvars.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4377952256,
"size" : 98304,
"uuid" : "f27197b0-218b-34ab-8eb6-d6a79e073b65",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_pickle.cpython-311-darwin.so",
"name" : "_pickle.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4380065792,
"size" : 2670592,
"uuid" : "43293ba5-a90d-3a5a-9ac4-56785f4876ed",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/core\/_multiarray_umath.cpython-311-darwin.so",
"name" : "_multiarray_umath.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4484513792,
"size" : 20922368,
"uuid" : "a47c5020-7d8a-3a70-8106-0225519e1c37",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libopenblas64_.0.dylib",
"name" : "libopenblas64_.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4405215232,
"size" : 3522560,
"uuid" : "dd0e012a-b6de-31b1-a28e-260c7b51e595",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libgfortran.5.dylib",
"name" : "libgfortran.5.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4378312704,
"size" : 311296,
"uuid" : "6d39d54b-d80e-3218-a095-b81ad0b3be90",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libquadmath.0.dylib",
"name" : "libquadmath.0.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4372054016,
"size" : 65536,
"uuid" : "d9875303-8f38-33d9-a0d3-ab0adff3b915",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libgcc_s.1.1.dylib",
"name" : "libgcc_s.1.1.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4377460736,
"size" : 32768,
"uuid" : "f7893d2c-fdad-3710-9bff-9932394d9c20",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_json.cpython-311-darwin.so",
"name" : "_json.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4377378816,
"size" : 16384,
"uuid" : "cc793e91-98a8-3493-9371-5b926c5aa800",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/arrays\/_arrays.cpython-311-darwin.so",
"name" : "_arrays.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4379426816,
"size" : 458752,
"uuid" : "eb1eccd4-532a-36d2-b5ca-f73c636907bf",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/arrays\/lib\/libarrays.dylib",
"name" : "libarrays.dylib"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4374855680,
"size" : 32768,
"uuid" : "d4a30d1d-5ac5-31ab-8176-122870f0d37b",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/select.cpython-311-darwin.so",
"name" : "select.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4374773760,
"size" : 16384,
"uuid" : "2445fbdd-084c-3422-9e31-989799c27768",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_posixsubprocess.cpython-311-darwin.so",
"name" : "_posixsubprocess.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4374691840,
"size" : 16384,
"uuid" : "623249d0-a11b-30d6-ad2c-b40602636f4f",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/fcntl.cpython-311-darwin.so",
"name" : "fcntl.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4374577152,
"size" : 32768,
"uuid" : "3f36e1af-227c-3b77-8706-4d454928ba75",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_struct.cpython-311-darwin.so",
"name" : "_struct.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4374478848,
"size" : 32768,
"uuid" : "af8a8db3-c8ae-3d4e-9d90-deba48bce444",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/binascii.cpython-311-darwin.so",
"name" : "binascii.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4374396928,
"size" : 16384,
"uuid" : "afcf6534-bc90-33a1-87bf-54c0486b936a",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_sha512.cpython-311-darwin.so",
"name" : "_sha512.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4372561920,
"size" : 16384,
"uuid" : "d4d6e22d-4e3f-3ca5-903a-407b6193beb0",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_random.cpython-311-darwin.so",
"name" : "_random.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4372480000,
"size" : 16384,
"uuid" : "e168f48a-c7bf-33c4-939d-3437dceaf7ab",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_bisect.cpython-311-darwin.so",
"name" : "_bisect.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4374986752,
"size" : 196608,
"uuid" : "d5041d58-8229-3070-90f7-89435745d455",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_lzma.cpython-311-darwin.so",
"name" : "_lzma.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4372398080,
"size" : 16384,
"uuid" : "09228711-c779-3a3a-9a84-37b1bb06c42b",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_bz2.cpython-311-darwin.so",
"name" : "_bz2.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4372283392,
"size" : 32768,
"uuid" : "f8442991-1d24-3c6f-a7a7-790c3a21a7cb",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/zlib.cpython-311-darwin.so",
"name" : "zlib.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4370792448,
"size" : 16384,
"uuid" : "2ab0848e-10ac-385d-96c9-1fcd525a67e4",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_typing.cpython-311-darwin.so",
"name" : "_typing.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4370612224,
"size" : 81920,
"uuid" : "e09e36d2-2e87-35de-9c91-30a33a6d9f79",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_datetime.cpython-311-darwin.so",
"name" : "_datetime.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4370874368,
"size" : 49152,
"uuid" : "14a2919a-96e1-3520-af80-d7d6f18b0b43",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/math.cpython-311-darwin.so",
"name" : "math.cpython-311-darwin.so"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4387291136,
"CFBundleShortVersionString" : "3.11.2, (c) 2001-2023 Python Software Foundation.",
"CFBundleIdentifier" : "org.python.python",
"size" : 3981312,
"uuid" : "39a95e29-4c8c-3208-8516-cfcc73eb7f4d",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/Python",
"name" : "Python",
"CFBundleVersion" : "3.11.2"
},
{
"source" : "P",
"arch" : "arm64",
"base" : 4368400384,
"size" : 16384,
"uuid" : "17982d98-65bc-3327-8526-577ec996453c",
"path" : "\/Applications\/ChimeraX-1.7.1.app\/Contents\/bin\/ChimeraX",
"name" : "ChimeraX"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6906793984,
"size" : 241660,
"uuid" : "9b8b53f9-e2b6-36df-98e9-28d8fca732f2",
"path" : "\/usr\/lib\/system\/libsystem_kernel.dylib",
"name" : "libsystem_kernel.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6907035648,
"size" : 53248,
"uuid" : "386b0fc1-7873-3328-8e71-43269fd1b2c7",
"path" : "\/usr\/lib\/system\/libsystem_pthread.dylib",
"name" : "libsystem_pthread.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6905581568,
"size" : 520184,
"uuid" : "05b44e93-dffc-3bd8-90ab-fd97cb73f171",
"path" : "\/usr\/lib\/system\/libsystem_c.dylib",
"name" : "libsystem_c.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6907244544,
"size" : 32744,
"uuid" : "d5bbfc31-d52a-37d6-a41b-48638113ad4c",
"path" : "\/usr\/lib\/system\/libsystem_platform.dylib",
"name" : "libsystem_platform.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6906679296,
"size" : 114684,
"uuid" : "4ac7c5cd-3746-3a53-aad6-c231e183b705",
"path" : "\/usr\/lib\/libc++abi.dylib",
"name" : "libc++abi.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6903005184,
"size" : 327044,
"uuid" : "b326b2c3-1069-3d17-b49d-9dcb24efec6f",
"path" : "\/usr\/lib\/libobjc.A.dylib",
"name" : "libobjc.A.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6906101760,
"size" : 577528,
"uuid" : "ec33cd83-7098-3ad6-82c8-bc03ac81e87b",
"path" : "\/usr\/lib\/libc++.1.dylib",
"name" : "libc++.1.dylib"
},
{
"source" : "P",
"arch" : "arm64e",
"base" : 6903332864,
"size" : 559640,
"uuid" : "37bbc384-0755-31c7-a808-0ed49e44dd8e",
"path" : "\/usr\/lib\/dyld",
"name" : "dyld"
},
{
"size" : 0,
"source" : "A",
"base" : 0,
"uuid" : "00000000-0000-0000-0000-000000000000"
}
],
"sharedCache" : {
"base" : 6902579200,
"size" : 4220698624,
"uuid" : "3406ad1b-2469-30eb-9863-5dce861e6dea"
},
"vmSummary" : "ReadOnly portion of Libraries: Total=888.2M resident=0K(0%) swapped_out_or_unallocated=888.2M(100%)\nWritable regions: Total=2.5G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=2.5G(100%)\n\n VIRTUAL REGION \nREGION TYPE SIZE COUNT (non-coalesced) \n=========== ======= ======= \nActivity Tracing 256K 1 \nKernel Alloc Once 32K 1 \nMALLOC 2.0G 55 \nMALLOC guard page 96K 6 \nSTACK GUARD 224K 14 \nStack 15.4M 15 \nStack Guard 56.0M 1 \nVM_ALLOCATE 163.0M 71 \nVM_ALLOCATE (reserved) 288.0M 1 reserved VM address space (unallocated)\n__AUTH 729K 165 \n__AUTH_CONST 12.8M 315 \n__DATA 8591K 441 \n__DATA_CONST 18.6M 447 \n__DATA_DIRTY 698K 105 \n__FONT_DATA 4K 1 \n__LINKEDIT 560.8M 131 \n__OBJC_RO 71.9M 1 \n__OBJC_RW 2199K 1 \n__TEXT 327.4M 460 \ndyld private memory 368K 4 \nmapped file 31.2M 3 \nshared memory 64K 4 \n=========== ======= ======= \nTOTAL 3.5G 2243 \nTOTAL, minus reserved VM space 3.2G 2243 \n",
"legacyInfo" : {
"threadTriggered" : {
"queue" : "com.apple.main-thread"
}
},
"logWritingSignature" : "d949a67e739f52e9f7c0425aa3bb28cbda35ce9f",
"trialInfo" : {
"rollouts" : [
],
"experiments" : [
{
"treatmentId" : "c47ab4cc-c9c3-4b5d-a87c-e2433ce02597",
"experimentId" : "6639bc6ba73d460582162323",
"deploymentId" : 400000006
},
{
"treatmentId" : "45f4e2a5-551b-4bc2-a2dc-19c244dda8f8",
"experimentId" : "6643969b3099cf28e049862f",
"deploymentId" : 400000007
}
]
}
}
Log:
Startup Messages
---
warnings | Replacing fetcher for 'ngff' and format OME-Zarr from OME-Zarr
bundle with that from OME-Zarr bundle
Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR bundle with
that from NMRSTAR bundle
UCSF ChimeraX version: 1.7.1 (2024-01-23)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open
> /Users/gabi/workspace/ecod_nucleotide_binding/data/superposed_ecod/ADE/e5ur0A1_NAD_C_401.cif
Summary of feedback from opening
/Users/gabi/workspace/ecod_nucleotide_binding/data/superposed_ecod/ADE/e5ur0A1_NAD_C_401.cif
---
warning | No mmCIF models found.
OpenGL version: 4.1 Metal - 88.1
OpenGL renderer: Apple M2 Max
OpenGL vendor: Apple
Python: 3.11.2
Locale: UTF-8
Qt version: PyQt6 6.3.1, Qt 6.3.1
Qt runtime version: 6.3.2
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: Mac14,5
Model Number: Z17J000SGHB/A
Chip: Apple M2 Max
Total Number of Cores: 12 (8 performance and 4 efficiency)
Memory: 96 GB
System Firmware Version: 10151.121.1
OS Loader Version: 10151.121.1
Software:
System Software Overview:
System Version: macOS 14.5 (23F79)
Kernel Version: Darwin 23.5.0
Time since boot: 1 day, 4 hours, 20 minutes
Graphics/Displays:
Apple M2 Max:
Chipset Model: Apple M2 Max
Type: GPU
Bus: Built-In
Total Number of Cores: 38
Vendor: Apple (0x106b)
Metal Support: Metal 3
Displays:
LG HDR WFHD:
Resolution: 2560 x 1080 (UW-UXGA - Ultra Wide - Ultra Extended Graphics Array)
UI Looks like: 2560 x 1080 @ 60.00Hz
Main Display: Yes
Mirror: Off
Online: Yes
Rotation: Supported
Installed Packages:
alabaster: 0.7.16
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.4.1
Babel: 2.14.0
backcall: 0.2.0
beautifulsoup4: 4.11.2
blockdiag: 3.0.0
blosc2: 2.0.0
build: 0.10.0
certifi: 2022.12.7
cftime: 1.6.3
charset-normalizer: 3.3.2
ChimeraX-AddCharge: 1.5.13
ChimeraX-AddH: 2.2.5
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.4.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.12.2
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.1.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.49.1
ChimeraX-AtomicLibrary: 12.1.5
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.4
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.10.5
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.1
ChimeraX-CheckWaters: 1.3.2
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-Clipper: 0.22.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.5
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.7.1
ChimeraX-CoreFormats: 1.2
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.2
ChimeraX-DistMonitor: 1.4
ChimeraX-DockPrep: 1.1.3
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.3
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ISOLDE: 1.7.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-IUPAC: 1.0
ChimeraX-Label: 1.1.8
ChimeraX-ListInfo: 1.2.2
ChimeraX-Log: 1.1.6
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.9.1
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.1.2
ChimeraX-MCopy: 1.0
ChimeraX-MDcrds: 2.6.1
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.12.1
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.14
ChimeraX-ModelPanel: 1.4
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0.3
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nifti: 1.1
ChimeraX-NRRD: 1.1
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.13.1
ChimeraX-PDB: 2.7.3
ChimeraX-PDBBio: 1.0.1
ChimeraX-PDBLibrary: 1.0.4
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-PICKLUSTER: 0.5
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.2
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.1
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.2
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 4.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.2
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.11
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.2
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1.2
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.12.4
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.2
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2.2
ChimeraX-TapeMeasure: 1.0
ChimeraX-TaskManager: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.4
ChimeraX-Topography: 1.0
ChimeraX-ToQuest: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.33.3
ChimeraX-uniprot: 2.3
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.3.2
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-vrml: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.3
ChimeraX-Zone: 1.0.1
colorama: 0.4.6
comm: 0.2.1
contourpy: 1.2.0
cxservices: 1.2.2
cycler: 0.12.1
Cython: 0.29.33
debugpy: 1.8.0
decorator: 5.1.1
docutils: 0.19
executing: 2.0.1
filelock: 3.9.0
fonttools: 4.47.2
funcparserlib: 2.0.0a0
glfw: 2.6.4
grako: 3.16.5
h5py: 3.10.0
html2text: 2020.1.16
idna: 3.6
ihm: 0.38
imagecodecs: 2023.9.18
imagesize: 1.4.1
ipykernel: 6.23.2
ipython: 8.14.0
ipython-genutils: 0.2.0
ipywidgets: 8.1.1
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 8.2.0
jupyter-core: 5.7.1
jupyterlab-widgets: 3.0.9
kiwisolver: 1.4.5
line-profiler: 4.0.2
lxml: 4.9.2
lz4: 4.3.2
MarkupSafe: 2.1.4
matplotlib: 3.7.2
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.6.0
netCDF4: 1.6.2
networkx: 3.1
nibabel: 5.0.1
nptyping: 2.5.0
numexpr: 2.8.8
numpy: 1.25.1
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.9.0
pickleshare: 0.7.5
pillow: 10.2.0
pip: 23.0
pkginfo: 1.9.6
platformdirs: 4.1.0
prompt-toolkit: 3.0.43
psutil: 5.9.5
ptyprocess: 0.7.0
pure-eval: 0.2.2
py-cpuinfo: 9.0.0
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.16.1
pynrrd: 1.0.0
PyOpenGL: 3.1.7
PyOpenGL-accelerate: 3.1.7
pyopenxr: 1.0.2801
pyparsing: 3.0.9
pyproject-hooks: 1.0.0
PyQt6-commercial: 6.3.1
PyQt6-Qt6: 6.3.2
PyQt6-sip: 13.4.0
PyQt6-WebEngine-commercial: 6.3.1
PyQt6-WebEngine-Qt6: 6.3.2
python-dateutil: 2.8.2
pytz: 2023.3.post1
pyzmq: 25.1.2
qtconsole: 5.4.3
QtPy: 2.4.1
RandomWords: 0.4.0
requests: 2.31.0
scipy: 1.11.1
setuptools: 67.4.0
setuptools-scm: 7.0.5
sfftk-rw: 0.7.3
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
soupsieve: 2.5
sphinx: 6.1.3
sphinx-autodoc-typehints: 1.22
sphinxcontrib-applehelp: 1.0.8
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.6
sphinxcontrib-htmlhelp: 2.0.5
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.7
sphinxcontrib-serializinghtml: 1.1.10
stack-data: 0.6.3
superqt: 0.5.0
tables: 3.8.0
tcia-utils: 1.5.1
tifffile: 2023.7.18
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.4
traitlets: 5.9.0
typing-extensions: 4.9.0
tzdata: 2023.4
urllib3: 2.1.0
wcwidth: 0.2.13
webcolors: 1.12
wheel: 0.38.4
wheel-filename: 1.4.1
widgetsnbextension: 4.0.9
Change History (2)
comment:1 by , 16 months ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Core |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Crash getting residue atoms while writing mmCIF |
comment:2 by , 16 months ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
Note:
See TracTickets
for help on using tickets.
