Opened 4 years ago
Closed 4 years ago
#6162 closed defect (not a bug)
'forEachFile' keyword: 'foreach' has no suffix
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Input/Output | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Windows-10-10.0.22543
ChimeraX Version: 1.2.5 (2021-05-24 04:13:57 UTC)
Description
i tried to run a cxc script with open script.cxc foreach *.mae
Log:
UCSF ChimeraX version: 1.2.5 (2021-05-24)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> cd cd C:\Users\arangarajan\Documents\0-workdir\020922\0-combo
Expected name of a folder to open/read; a name of 'browse' will bring up a
file browser or a keyword
> cd C:\Users\arangarajan\Documents\0-workdir\020922\0-combo
Current working directory is:
C:\Users\arangarajan\Documents\0-workdir\020922\0-combo
> open RMSD-distance-final.cxc foreach *.mae
'foreach' has no suffix
> open RMSD-distance-final-2.cxc foreach *.mae
'foreach' has no suffix
> open RMSD-distance-final-2.cxc format each *.mae
Invalid "format" argument: Should be one of 'aln', 'amber', 'amira', 'apbs',
'bild', 'brix', 'ccd', 'ccp4', 'cellpack', 'cmap', 'cmd', 'collada', 'com',
'compiled python', 'cube', 'dat', 'dcd', 'defattr', 'delphi', 'dicom', 'dock',
'dsn6', 'dv', 'emanhdf', 'fasta', 'fchk', 'fsc', 'gltf', 'gopenmol', 'gro',
'hdf', 'hssp', 'html', 'ihm', 'images', 'imagic', 'imod', 'imodmap', 'ims',
'log', 'macmolplt', 'markers', 'mmcif', 'mmtf', 'mol2', 'mrc', 'msf', 'mtz',
'nbo31', 'nbo47', 'netcdfmap', 'obj', 'out', 'pdb', 'pdbqt', 'pfam', 'photo',
'pif', 'pir', 'positions', 'priism', 'profec', 'pseudobonds', 'python',
'qout', 'rmf', 'rsf', 'schrodinger maestro', 'sdf', 'segger', 'session',
'sff', 'situs', 'smiles', 'spider', 'sqmout', 'stl', 'stockholm', 'storm',
'swc', 'tom_em', 'trr', 'uhbd', 'uniprot', 'vtk', 'web fetch', 'xplor', 'xtc',
or 'xyz'
> open RMSD-distance-final-2.cxc foreach *.mae
'foreach' has no suffix
> open RMSD-distance-final-2.cxc foreach *mae
'foreach' has no suffix
> open RMSD-distance-final-2.cxc foreach *.mae
'foreach' has no suffix
> open RMSD-distance-final-2.cxc foreach *mae
'foreach' has no suffix
> open C:/Users/arangarajan/Documents/0-workdir/020922/combo-CHEMBL2396664.mae
Chain information for combo-CHEMBL2396664.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2396664.mae containing 2 structures (43265 atoms, 43688
bonds)
> open C:/Users/arangarajan/Documents/0-workdir/020922/RMSD-distance-final.cxc
> cd C:\Users\arangarajan\Documents\0-workdir\020922\0-combo
Current working directory is:
C:\Users\arangarajan\Documents\0-workdir\020922\0-combo
> delete /B,C
> view orient
> show ligand
> select ligand
96 atoms, 100 bonds, 2 residues, 2 models selected
> style ball
Changed 36750 atom styles
> select #1.1 & ligand & C
20 atoms, 20 bonds, 1 residue, 1 model selected
> color sel green yellow
> select #1.1 & protein
18327 atoms, 18495 bonds, 1164 residues, 1 model selected
> color sel olive drab target c
> select #1.2 & ligand & C
20 atoms, 20 bonds, 1 residue, 1 model selected
> color sel deep pink
> select #1.2 & protein
18327 atoms, 18495 bonds, 1164 residues, 1 model selected
> color sel pink target c
> measure center #1.1 & ligand mark true
Center of mass of 48 atoms = (161.74, 163.08, 158.28)
> color #3 lime
> measure center #1.2 & ligand mark true
Center of mass of 48 atoms = (162.39, 166.17, 156.29)
> color #4 hot pink
> measure center #1.1 :310,335,728,759 mark true
Center of mass of 81 atoms = (155.30, 168.24, 154.79)
> color #5 chartreuse
> measure center #1.2 :310,335,728,759 mark true
Center of mass of 81 atoms = (155.46, 167.78, 154.28)
> color #6 crimson
> rmsd #1.2 & ligand to #1.1 & ligand
RMSD between 48 atom pairs is 7.419
> distance #3 #5
Distance between combo-CHEMBL2396664.mae center 48 atoms #3/M mark 1 M and
combo-CHEMBL2396664.mae center 81 atoms #5/M mark 1 M: 7.400Å
> distance #4 #6
Expected exactly two atoms and/or measurable objects (e.g. axes, planes), got
1
> hide #4 models
> show #4 models
> ~select
Nothing selected
> ~select
Nothing selected
> hide #4 models
> show #4 models
> hide #4 models
> show #4 models
> hide cartoons
> view orient
> hide sidechain
> hide protein
> hide #3 models
> hide #2 models
> show #2 models
> show #3 models
> hide #5 models
> hide #4 models
> show #4 models
> show #5 models
> hide #2 models
> show #2 models
> hide #3 models
> show #3 models
> hide #4 models
> show #4 models
> select #2
1 atom, 1 residue, 1 model selected
> color lime
> color sel lime
> select #3
1 atom, 1 residue, 1 model selected
> color sel crimson
> ~select
Nothing selected
> close
> open C:/Users/arangarajan/Documents/0-workdir/020922/combo-CHEMBL2396664.mae
Chain information for combo-CHEMBL2396664.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2396664.mae containing 2 structures (43265 atoms, 43688
bonds)
> open C:/Users/arangarajan/Documents/0-workdir/020922/RMSD-distance-final.cxc
> delete /B,C
> view orient
> show ligand
> select ligand
96 atoms, 100 bonds, 2 residues, 2 models selected
> style ball
Changed 36750 atom styles
> select #1.1 & ligand & C
20 atoms, 20 bonds, 1 residue, 1 model selected
> color sel green yellow
> select #1.1 & protein
18327 atoms, 18495 bonds, 1164 residues, 1 model selected
> color sel olive drab target c
> select #1.2 & ligand & C
20 atoms, 20 bonds, 1 residue, 1 model selected
> color sel deep pink
> select #1.2 & protein
18327 atoms, 18495 bonds, 1164 residues, 1 model selected
> color sel pink target c
> measure center #1.1 & ligand mark true
Center of mass of 48 atoms = (161.74, 163.08, 158.28)
> select #2
1 atom, 1 residue, 1 model selected
> color sel lime
> measure center #1.2 & ligand mark true
Center of mass of 48 atoms = (162.39, 166.17, 156.29)
> select #3
1 atom, 1 residue, 1 model selected
> color sel hot pink
> measure center #1.1 :310,335,728,759 mark true
Center of mass of 81 atoms = (155.30, 168.24, 154.79)
> select #4
1 atom, 1 residue, 1 model selected
> color sel chartreuse
> measure center #1.2 :310,335,728,759 mark true
Center of mass of 81 atoms = (155.46, 167.78, 154.28)
> select #5
1 atom, 1 residue, 1 model selected
> color sel crimson
> rmsd #1.2 & ligand to #1.1 & ligand
RMSD between 48 atom pairs is 7.419
> distance #2 #4
Distance between combo-CHEMBL2396664.mae center 48 atoms #2/M mark 1 M and
combo-CHEMBL2396664.mae center 81 atoms #4/M mark 1 M: 8.962Å
> distance #3 #5
Distance between combo-CHEMBL2396664.mae center 48 atoms #3/M mark 1 M and
combo-CHEMBL2396664.mae center 81 atoms #5/M mark 1 M: 7.400Å
> log save $file.html
executed RMSD-distance-final.cxc
> pwd
Current working directory is:
C:\Users\arangarajan\Documents\0-workdir\020922\0-combo
> pwd
Current working directory is:
C:\Users\arangarajan\Documents\0-workdir\020922\0-combo
> align ligand ~ligand
Expected a keyword
> align ligand
Missing required "to_atoms" argument
> focus ligand
Unknown command: focus ligand
> orient ligand
Unknown command: orient ligand
> view ligand
> surface
> surface del
Expected an atoms specifier or a keyword
> delete surf
Missing or invalid "atoms" argument: invalid atoms specifier
> hide surfaces
> preset
Missing or invalid "text1" argument: Expected a text string
> preset apply publication
No preset name matches 'apply publication'
> preset publication
Preset expands to these ChimeraX commands:
set bg white
graphics silhouettes t
> ~select
Nothing selected
> view orient
> undo
> undo
> undo
> undo
> undo
> open C:/Users/arangarajan/Documents/0-workdir/020922/0-combo/test.py
Traceback (most recent call last):
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\core\scripting.py", line 83, in open_python_script
code = compile(data, stream.name, 'exec')
File "C:/Users/arangarajan/Documents/0-workdir/020922/0-combo/test.py", line
22
rc("save" + png_name ")
^
SyntaxError: EOL while scanning string literal
Error opening python file
C:/Users/arangarajan/Documents/0-workdir/020922/0-combo/test.py
> open test.py
Traceback (most recent call last):
File "test.py", line 14, in <module>
rc("open " + fn)
TypeError: run() missing 1 required positional argument: 'text'
Error opening python file test.py
> undo
> open test.py
> open combo-CHEMBL1089302.mae
Chain information for combo-CHEMBL1089302.mae
---
Chain | Description
7.1/A 7.2/A | No description available
7.2/B | No description available
7.2/C | No description available
Opened combo-CHEMBL1089302.mae containing 2 structures (43233 atoms, 43654
bonds)
> select ligand
160 atoms, 166 bonds, 4 residues, 4 models selected
> zoom sel
Traceback (most recent call last):
File "test.py", line 17, in <module>
rc(session,"zoom sel") # surface receptor
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\core\commands\run.py", line 36, in run
results = command.run(text, log=log, return_json=return_json)
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\core\commands\cli.py", line 2821, in run
raise UserError(self._error)
chimerax.core.errors.UserError: Expected a number or a keyword
Error opening python file test.py
> select ligand
160 atoms, 166 bonds, 4 residues, 4 models selected
> zoom sel
Expected a number or a keyword
> view sel
> close
> test.py
Unknown command: test.py
> test.pypwd
Unknown command: test.pypwd
> pwd
Current working directory is:
C:\Users\arangarajan\Documents\0-workdir\020922\0-combo
> open test.py
> open combo-CHEMBL1089302.mae
Chain information for combo-CHEMBL1089302.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL1089302.mae containing 2 structures (43233 atoms, 43654
bonds)
> select ligand
64 atoms, 66 bonds, 2 residues, 2 models selected
> view sel
> savecombo-CHEMBL1089302.png
Traceback (most recent call last):
File "test.py", line 22, in <module>
rc(session,"save" + png_name )
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\core\commands\run.py", line 36, in run
results = command.run(text, log=log, return_json=return_json)
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\core\commands\cli.py", line 2805, in run
raise UserError(self._error)
chimerax.core.errors.UserError: Unknown command: savecombo-CHEMBL1089302.png
Error opening python file test.py
> open test.py
> open combo-CHEMBL1089302.mae
Chain information for combo-CHEMBL1089302.mae
---
Chain | Description
2.1/A 2.2/A | No description available
2.2/B | No description available
2.2/C | No description available
Opened combo-CHEMBL1089302.mae containing 2 structures (43233 atoms, 43654
bonds)
> select ligand
128 atoms, 132 bonds, 4 residues, 4 models selected
> view sel
> savecombo-CHEMBL1089302.png
Traceback (most recent call last):
File "test.py", line 22, in <module>
rc(session,"save" + '' + png_name )
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\core\commands\run.py", line 36, in run
results = command.run(text, log=log, return_json=return_json)
File "C:\Program Files\ChimeraX 1.2.5\bin\lib\site-
packages\chimerax\core\commands\cli.py", line 2805, in run
raise UserError(self._error)
chimerax.core.errors.UserError: Unknown command: savecombo-CHEMBL1089302.png
Error opening python file test.py
> close
> open test.py
> open combo-CHEMBL1089302.mae
Chain information for combo-CHEMBL1089302.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL1089302.mae containing 2 structures (43233 atoms, 43654
bonds)
> select ligand
64 atoms, 66 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1089302.png
> close
> open combo-CHEMBL1089502.mae
Chain information for combo-CHEMBL1089502.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL1089502.mae containing 2 structures (36718 atoms, 37056
bonds)
> select ligand
64 atoms, 66 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1089502.png
> close
> open combo-CHEMBL1094181.mae
Chain information for combo-CHEMBL1094181.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL1094181.mae containing 2 structures (36716 atoms, 37056
bonds)
> select ligand
62 atoms, 66 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1094181.png
> close
> open combo-CHEMBL1097342.mae
Chain information for combo-CHEMBL1097342.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL1097342.mae containing 2 structures (36836 atoms, 37180
bonds)
> select ligand
182 atoms, 190 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1097342.png
> close
> open combo-CHEMBL1172.mae
Chain information for combo-CHEMBL1172.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL1172.mae containing 2 structures (43253 atoms, 43678 bonds)
> select ligand
84 atoms, 90 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1172.png
> close
> open combo-CHEMBL1270795.mae
Chain information for combo-CHEMBL1270795.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL1270795.mae containing 2 structures (36726 atoms, 37068
bonds)
> select ligand
72 atoms, 78 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1270795.png
> close
> open combo-CHEMBL1271655.mae
Chain information for combo-CHEMBL1271655.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL1271655.mae containing 2 structures (43277 atoms, 43700
bonds)
> select ligand
108 atoms, 112 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1271655.png
> close
> open combo-CHEMBL1288128.mae
Chain information for combo-CHEMBL1288128.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL1288128.mae containing 2 structures (43241 atoms, 43666
bonds)
> select ligand
72 atoms, 78 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1288128.png
> close
> open combo-CHEMBL158784.mae
Chain information for combo-CHEMBL158784.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL158784.mae containing 2 structures (36758 atoms, 37100
bonds)
> select ligand
104 atoms, 110 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL158784.png
> close
> open combo-CHEMBL1668917.mae
Chain information for combo-CHEMBL1668917.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL1668917.mae containing 2 structures (36760 atoms, 37102
bonds)
> select ligand
106 atoms, 112 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1668917.png
> close
> open combo-CHEMBL1684707.mae
Chain information for combo-CHEMBL1684707.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL1684707.mae containing 2 structures (36796 atoms, 37138
bonds)
> select ligand
142 atoms, 148 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1684707.png
> close
> open combo-CHEMBL172.mae
Chain information for combo-CHEMBL172.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL172.mae containing 2 structures (43255 atoms, 43678 bonds)
> select ligand
86 atoms, 90 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL172.png
> close
> open combo-CHEMBL1782567.mae
Chain information for combo-CHEMBL1782567.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL1782567.mae containing 2 structures (43315 atoms, 43740
bonds)
> select ligand
146 atoms, 152 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1782567.png
> close
> open combo-CHEMBL1798027.mae
Chain information for combo-CHEMBL1798027.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL1798027.mae containing 2 structures (43259 atoms, 43680
bonds)
> select ligand
90 atoms, 92 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1798027.png
> close
> open combo-CHEMBL1830053.mae
Chain information for combo-CHEMBL1830053.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL1830053.mae containing 2 structures (36762 atoms, 37106
bonds)
> select ligand
108 atoms, 116 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1830053.png
> close
> open combo-CHEMBL1830711.mae
Chain information for combo-CHEMBL1830711.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL1830711.mae containing 2 structures (36718 atoms, 37060
bonds)
> select ligand
64 atoms, 70 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1830711.png
> close
> open combo-CHEMBL1835999.mae
Chain information for combo-CHEMBL1835999.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL1835999.mae containing 2 structures (36752 atoms, 37094
bonds)
> select ligand
98 atoms, 104 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1835999.png
> close
> open combo-CHEMBL1837049.mae
Chain information for combo-CHEMBL1837049.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL1837049.mae containing 2 structures (36754 atoms, 37098
bonds)
> select ligand
100 atoms, 108 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1837049.png
> close
> open combo-CHEMBL1837060.mae
Chain information for combo-CHEMBL1837060.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL1837060.mae containing 2 structures (43267 atoms, 43694
bonds)
> select ligand
98 atoms, 106 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1837060.png
> close
> open combo-CHEMBL1915251.mae
Chain information for combo-CHEMBL1915251.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL1915251.mae containing 2 structures (36762 atoms, 37104
bonds)
> select ligand
108 atoms, 114 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1915251.png
> close
> open combo-CHEMBL1927156.mae
Chain information for combo-CHEMBL1927156.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL1927156.mae containing 2 structures (43267 atoms, 43694
bonds)
> select ligand
98 atoms, 106 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1927156.png
> close
> open combo-CHEMBL1928272.mae
Chain information for combo-CHEMBL1928272.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL1928272.mae containing 2 structures (43333 atoms, 43760
bonds)
> select ligand
164 atoms, 172 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1928272.png
> close
> open combo-CHEMBL1939108.mae
Chain information for combo-CHEMBL1939108.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL1939108.mae containing 2 structures (36730 atoms, 37070
bonds)
> select ligand
76 atoms, 80 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1939108.png
> close
> open combo-CHEMBL1939803.mae
Chain information for combo-CHEMBL1939803.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL1939803.mae containing 2 structures (36746 atoms, 37088
bonds)
> select ligand
92 atoms, 98 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1939803.png
> close
> open combo-CHEMBL1950904.mae
Chain information for combo-CHEMBL1950904.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL1950904.mae containing 2 structures (36778 atoms, 37124
bonds)
> select ligand
124 atoms, 134 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL1950904.png
> close
> open combo-CHEMBL2.mae
Chain information for combo-CHEMBL2.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2.mae containing 2 structures (43267 atoms, 43692 bonds)
> select ligand
98 atoms, 104 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2.png
> close
> open combo-CHEMBL2022620.mae
Chain information for combo-CHEMBL2022620.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL2022620.mae containing 2 structures (36700 atoms, 37038
bonds)
> select ligand
46 atoms, 48 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2022620.png
> close
> open combo-CHEMBL2047888.mae
Chain information for combo-CHEMBL2047888.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL2047888.mae containing 2 structures (36778 atoms, 37118
bonds)
> select ligand
124 atoms, 128 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2047888.png
> close
> open combo-CHEMBL2057368.mae
Chain information for combo-CHEMBL2057368.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2057368.mae containing 2 structures (43297 atoms, 43724
bonds)
> select ligand
128 atoms, 136 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2057368.png
> close
> open combo-CHEMBL2058166.mae
Chain information for combo-CHEMBL2058166.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL2058166.mae containing 2 structures (36756 atoms, 37098
bonds)
> select ligand
102 atoms, 108 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2058166.png
> close
> open combo-CHEMBL2151437.mae
Chain information for combo-CHEMBL2151437.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL2151437.mae containing 2 structures (36720 atoms, 37062
bonds)
> select ligand
66 atoms, 72 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2151437.png
> close
> open combo-CHEMBL2177472.mae
Chain information for combo-CHEMBL2177472.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2177472.mae containing 2 structures (43293 atoms, 43720
bonds)
> select ligand
124 atoms, 132 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2177472.png
> close
> open combo-CHEMBL2177908.mae
Chain information for combo-CHEMBL2177908.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL2177908.mae containing 2 structures (36750 atoms, 37094
bonds)
> select ligand
96 atoms, 104 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2177908.png
> close
> open combo-CHEMBL2178247.mae
Chain information for combo-CHEMBL2178247.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL2178247.mae containing 2 structures (36740 atoms, 37082
bonds)
> select ligand
86 atoms, 92 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2178247.png
> close
> open combo-CHEMBL2180070.mae
Chain information for combo-CHEMBL2180070.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL2180070.mae containing 2 structures (36756 atoms, 37100
bonds)
> select ligand
102 atoms, 110 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2180070.png
> close
> open combo-CHEMBL2181988.mae
Chain information for combo-CHEMBL2181988.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL2181988.mae containing 2 structures (36708 atoms, 37048
bonds)
> select ligand
54 atoms, 58 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2181988.png
> close
> open combo-CHEMBL2316380.mae
Chain information for combo-CHEMBL2316380.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL2316380.mae containing 2 structures (36766 atoms, 37110
bonds)
> select ligand
112 atoms, 120 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2316380.png
> close
> open combo-CHEMBL2325478.mae
Chain information for combo-CHEMBL2325478.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2325478.mae containing 2 structures (43219 atoms, 43640
bonds)
> select ligand
50 atoms, 52 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2325478.png
> close
> open combo-CHEMBL2332477.mae
Chain information for combo-CHEMBL2332477.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL2332477.mae containing 2 structures (36744 atoms, 37086
bonds)
> select ligand
90 atoms, 96 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2332477.png
> close
> open combo-CHEMBL2347996.mae
Chain information for combo-CHEMBL2347996.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2347996.mae containing 2 structures (43263 atoms, 43688
bonds)
> select ligand
94 atoms, 100 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2347996.png
> close
> open combo-CHEMBL2348780.mae
Chain information for combo-CHEMBL2348780.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL2348780.mae containing 2 structures (36762 atoms, 37104
bonds)
> select ligand
108 atoms, 114 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2348780.png
> close
> open combo-CHEMBL2391367.mae
Chain information for combo-CHEMBL2391367.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2391367.mae containing 2 structures (43265 atoms, 43686
bonds)
> select ligand
96 atoms, 98 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2391367.png
> close
> open combo-CHEMBL2396664.mae
Chain information for combo-CHEMBL2396664.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2396664.mae containing 2 structures (43265 atoms, 43688
bonds)
> select ligand
96 atoms, 100 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2396664.png
> close
> open combo-CHEMBL2402083.mae
Chain information for combo-CHEMBL2402083.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL2402083.mae containing 2 structures (36760 atoms, 37104
bonds)
> select ligand
106 atoms, 114 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2402083.png
> close
> open combo-CHEMBL2402085.mae
Chain information for combo-CHEMBL2402085.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2402085.mae containing 2 structures (43261 atoms, 43688
bonds)
> select ligand
92 atoms, 100 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2402085.png
> close
> open combo-CHEMBL2403727.mae
Chain information for combo-CHEMBL2403727.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL2403727.mae containing 2 structures (36856 atoms, 37202
bonds)
> select ligand
202 atoms, 212 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2403727.png
> close
> open combo-CHEMBL2420485.mae
Chain information for combo-CHEMBL2420485.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2420485.mae containing 2 structures (43227 atoms, 43650
bonds)
> select ligand
58 atoms, 62 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2420485.png
> close
> open combo-CHEMBL2425618.mae
Chain information for combo-CHEMBL2425618.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2425618.mae containing 2 structures (43313 atoms, 43736
bonds)
> select ligand
144 atoms, 148 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2425618.png
> close
> open combo-CHEMBL2425628.mae
Chain information for combo-CHEMBL2425628.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2425628.mae containing 2 structures (43321 atoms, 43748
bonds)
> select ligand
152 atoms, 160 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2425628.png
> close
> open combo-CHEMBL2426077.mae
Chain information for combo-CHEMBL2426077.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2426077.mae containing 2 structures (43289 atoms, 43716
bonds)
> select ligand
120 atoms, 128 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2426077.png
> close
> open combo-CHEMBL2431249.mae
Chain information for combo-CHEMBL2431249.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL2431249.mae containing 2 structures (36804 atoms, 37152
bonds)
> select ligand
150 atoms, 162 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2431249.png
> close
> open combo-CHEMBL2431369.mae
Chain information for combo-CHEMBL2431369.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2431369.mae containing 2 structures (43291 atoms, 43714
bonds)
> select ligand
122 atoms, 126 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2431369.png
> close
> open combo-CHEMBL2441571.mae
Chain information for combo-CHEMBL2441571.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL2441571.mae containing 2 structures (36728 atoms, 37068
bonds)
> select ligand
74 atoms, 78 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL2441571.png
> close
> open combo-CHEMBL252164.mae
Chain information for combo-CHEMBL252164.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL252164.mae containing 2 structures (43299 atoms, 43724
bonds)
> select ligand
130 atoms, 136 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL252164.png
> close
> open combo-CHEMBL255168.mae
Chain information for combo-CHEMBL255168.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL255168.mae containing 2 structures (36750 atoms, 37088
bonds)
> select ligand
96 atoms, 98 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL255168.png
> close
> open combo-CHEMBL259366.mae
Chain information for combo-CHEMBL259366.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL259366.mae containing 2 structures (43303 atoms, 43728
bonds)
> select ligand
134 atoms, 140 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL259366.png
> close
> open combo-CHEMBL266195.mae
Chain information for combo-CHEMBL266195.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL266195.mae containing 2 structures (36738 atoms, 37074
bonds)
> select ligand
84 atoms, 84 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL266195.png
> close
> open combo-CHEMBL271967.mae
Chain information for combo-CHEMBL271967.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL271967.mae containing 2 structures (36742 atoms, 37084
bonds)
> select ligand
88 atoms, 94 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL271967.png
> close
> open combo-CHEMBL291784.mae
Chain information for combo-CHEMBL291784.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL291784.mae containing 2 structures (36724 atoms, 37064
bonds)
> select ligand
70 atoms, 74 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL291784.png
> close
> open combo-CHEMBL3086086.mae
Chain information for combo-CHEMBL3086086.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL3086086.mae containing 2 structures (43271 atoms, 43698
bonds)
> select ligand
102 atoms, 110 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3086086.png
> close
> open combo-CHEMBL3094403.mae
Chain information for combo-CHEMBL3094403.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3094403.mae containing 2 structures (36832 atoms, 37178
bonds)
> select ligand
178 atoms, 188 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3094403.png
> close
> open combo-CHEMBL3109933.mae
Chain information for combo-CHEMBL3109933.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3109933.mae containing 2 structures (36778 atoms, 37120
bonds)
> select ligand
124 atoms, 130 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3109933.png
> close
> open combo-CHEMBL3110070.mae
Chain information for combo-CHEMBL3110070.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3110070.mae containing 2 structures (36716 atoms, 37056
bonds)
> select ligand
62 atoms, 66 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3110070.png
> close
> open combo-CHEMBL3120495.mae
Chain information for combo-CHEMBL3120495.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3120495.mae containing 2 structures (36732 atoms, 37070
bonds)
> select ligand
78 atoms, 80 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3120495.png
> close
> open combo-CHEMBL3122107.mae
Chain information for combo-CHEMBL3122107.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3122107.mae containing 2 structures (36736 atoms, 37076
bonds)
> select ligand
82 atoms, 86 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3122107.png
> close
> open combo-CHEMBL3122122.mae
Chain information for combo-CHEMBL3122122.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL3122122.mae containing 2 structures (43277 atoms, 43702
bonds)
> select ligand
108 atoms, 114 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3122122.png
> close
> open combo-CHEMBL3127675.mae
Chain information for combo-CHEMBL3127675.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL3127675.mae containing 2 structures (43301 atoms, 43728
bonds)
> select ligand
132 atoms, 140 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3127675.png
> close
> open combo-CHEMBL3127895.mae
Chain information for combo-CHEMBL3127895.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3127895.mae containing 2 structures (36750 atoms, 37092
bonds)
> select ligand
96 atoms, 102 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3127895.png
> close
> open combo-CHEMBL3235350.mae
Chain information for combo-CHEMBL3235350.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL3235350.mae containing 2 structures (43305 atoms, 43732
bonds)
> select ligand
136 atoms, 144 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3235350.png
> close
> open combo-CHEMBL3235352.mae
Chain information for combo-CHEMBL3235352.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3235352.mae containing 2 structures (36770 atoms, 37112
bonds)
> select ligand
116 atoms, 122 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3235352.png
> close
> open combo-CHEMBL3237565.mae
Chain information for combo-CHEMBL3237565.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL3237565.mae containing 2 structures (43277 atoms, 43700
bonds)
> select ligand
108 atoms, 112 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3237565.png
> close
> open combo-CHEMBL3261276.mae
Chain information for combo-CHEMBL3261276.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3261276.mae containing 2 structures (36752 atoms, 37090
bonds)
> select ligand
98 atoms, 100 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3261276.png
> close
> open combo-CHEMBL3262802.mae
Chain information for combo-CHEMBL3262802.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3262802.mae containing 2 structures (36738 atoms, 37078
bonds)
> select ligand
84 atoms, 88 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3262802.png
> close
> open combo-CHEMBL3286561.mae
Chain information for combo-CHEMBL3286561.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL3286561.mae containing 2 structures (43251 atoms, 43674
bonds)
> select ligand
82 atoms, 86 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3286561.png
> close
> open combo-CHEMBL3314850.mae
Chain information for combo-CHEMBL3314850.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3314850.mae containing 2 structures (36718 atoms, 37058
bonds)
> select ligand
64 atoms, 68 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3314850.png
> close
> open combo-CHEMBL3317688.mae
Chain information for combo-CHEMBL3317688.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL3317688.mae containing 2 structures (43269 atoms, 43696
bonds)
> select ligand
100 atoms, 108 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3317688.png
> close
> open combo-CHEMBL3319213.mae
Chain information for combo-CHEMBL3319213.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3319213.mae containing 2 structures (36760 atoms, 37102
bonds)
> select ligand
106 atoms, 112 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3319213.png
> close
> open combo-CHEMBL3338598.mae
Chain information for combo-CHEMBL3338598.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3338598.mae containing 2 structures (36766 atoms, 37106
bonds)
> select ligand
112 atoms, 116 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3338598.png
> close
> open combo-CHEMBL3393327.mae
Chain information for combo-CHEMBL3393327.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3393327.mae containing 2 structures (36768 atoms, 37110
bonds)
> select ligand
114 atoms, 120 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3393327.png
> close
> open combo-CHEMBL339457.mae
Chain information for combo-CHEMBL339457.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL339457.mae containing 2 structures (43279 atoms, 43702
bonds)
> select ligand
110 atoms, 114 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL339457.png
> close
> open combo-CHEMBL3394938.mae
Chain information for combo-CHEMBL3394938.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL3394938.mae containing 2 structures (43279 atoms, 43706
bonds)
> select ligand
110 atoms, 118 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3394938.png
> close
> open combo-CHEMBL3401151.mae
Chain information for combo-CHEMBL3401151.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL3401151.mae containing 2 structures (43289 atoms, 43714
bonds)
> select ligand
120 atoms, 126 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3401151.png
> close
> open combo-CHEMBL3422235.mae
Chain information for combo-CHEMBL3422235.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3422235.mae containing 2 structures (36732 atoms, 37074
bonds)
> select ligand
78 atoms, 84 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3422235.png
> close
> open combo-CHEMBL3580968.mae
Chain information for combo-CHEMBL3580968.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL3580968.mae containing 2 structures (43265 atoms, 43692
bonds)
> select ligand
96 atoms, 104 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3580968.png
> close
> open combo-CHEMBL360163.mae
Chain information for combo-CHEMBL360163.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL360163.mae containing 2 structures (36796 atoms, 37138
bonds)
> select ligand
142 atoms, 148 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL360163.png
> close
> open combo-CHEMBL3634013.mae
Chain information for combo-CHEMBL3634013.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3634013.mae containing 2 structures (36770 atoms, 37112
bonds)
> select ligand
116 atoms, 122 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3634013.png
> close
> open combo-CHEMBL3634761.mae
Chain information for combo-CHEMBL3634761.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL3634761.mae containing 2 structures (43271 atoms, 43698
bonds)
> select ligand
102 atoms, 110 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3634761.png
> close
> open combo-CHEMBL370813.mae
Chain information for combo-CHEMBL370813.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL370813.mae containing 2 structures (36826 atoms, 37164
bonds)
> select ligand
172 atoms, 174 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL370813.png
> close
> open combo-CHEMBL3736345.mae
Chain information for combo-CHEMBL3736345.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3736345.mae containing 2 structures (36746 atoms, 37088
bonds)
> select ligand
92 atoms, 98 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3736345.png
> close
> open combo-CHEMBL3759096.mae
Chain information for combo-CHEMBL3759096.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3759096.mae containing 2 structures (36746 atoms, 37090
bonds)
> select ligand
92 atoms, 100 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3759096.png
> close
> open combo-CHEMBL376472.mae
Chain information for combo-CHEMBL376472.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL376472.mae containing 2 structures (43291 atoms, 43714
bonds)
> select ligand
122 atoms, 126 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL376472.png
> close
> open combo-CHEMBL3781316.mae
Chain information for combo-CHEMBL3781316.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3781316.mae containing 2 structures (36708 atoms, 37046
bonds)
> select ligand
54 atoms, 56 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3781316.png
> close
> open combo-CHEMBL3797378.mae
Chain information for combo-CHEMBL3797378.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3797378.mae containing 2 structures (36750 atoms, 37090
bonds)
> select ligand
96 atoms, 100 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3797378.png
> close
> open combo-CHEMBL3799438.mae
Chain information for combo-CHEMBL3799438.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL3799438.mae containing 2 structures (43255 atoms, 43678
bonds)
> select ligand
86 atoms, 90 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3799438.png
> close
> open combo-CHEMBL3809746.mae
Chain information for combo-CHEMBL3809746.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3809746.mae containing 2 structures (36772 atoms, 37112
bonds)
> select ligand
118 atoms, 122 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3809746.png
> close
> open combo-CHEMBL383196.mae
Chain information for combo-CHEMBL383196.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL383196.mae containing 2 structures (36850 atoms, 37192
bonds)
> select ligand
196 atoms, 202 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL383196.png
> close
> open combo-CHEMBL3892579.mae
Chain information for combo-CHEMBL3892579.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL3892579.mae containing 2 structures (36742 atoms, 37084
bonds)
> select ligand
88 atoms, 94 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3892579.png
> close
> open combo-CHEMBL396609.mae
Chain information for combo-CHEMBL396609.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL396609.mae containing 2 structures (36800 atoms, 37142
bonds)
> select ligand
146 atoms, 152 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL396609.png
> close
> open combo-CHEMBL3967105.mae
Chain information for combo-CHEMBL3967105.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL3967105.mae containing 2 structures (43271 atoms, 43696
bonds)
> select ligand
102 atoms, 108 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL3967105.png
> close
> open combo-CHEMBL400508.mae
Chain information for combo-CHEMBL400508.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL400508.mae containing 2 structures (43253 atoms, 43674
bonds)
> select ligand
84 atoms, 86 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL400508.png
> close
> open combo-CHEMBL401931.mae
Chain information for combo-CHEMBL401931.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL401931.mae containing 2 structures (43269 atoms, 43696
bonds)
> select ligand
100 atoms, 108 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL401931.png
> close
> open combo-CHEMBL403233.mae
Chain information for combo-CHEMBL403233.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL403233.mae containing 2 structures (36828 atoms, 37178
bonds)
> select ligand
174 atoms, 188 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL403233.png
> close
> open combo-CHEMBL412798.mae
Chain information for combo-CHEMBL412798.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL412798.mae containing 2 structures (36906 atoms, 37254
bonds)
> select ligand
252 atoms, 264 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL412798.png
> close
> open combo-CHEMBL455450.mae
Chain information for combo-CHEMBL455450.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL455450.mae containing 2 structures (43275 atoms, 43698
bonds)
> select ligand
106 atoms, 110 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL455450.png
> close
> open combo-CHEMBL457931.mae
Chain information for combo-CHEMBL457931.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL457931.mae containing 2 structures (43261 atoms, 43686
bonds)
> select ligand
92 atoms, 98 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL457931.png
> close
> open combo-CHEMBL460472.mae
Chain information for combo-CHEMBL460472.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL460472.mae containing 2 structures (36792 atoms, 37136
bonds)
> select ligand
138 atoms, 146 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL460472.png
> close
> open combo-CHEMBL491319.mae
Chain information for combo-CHEMBL491319.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL491319.mae containing 2 structures (43313 atoms, 43738
bonds)
> select ligand
144 atoms, 150 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL491319.png
> close
> open combo-CHEMBL502182.mae
Chain information for combo-CHEMBL502182.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL502182.mae containing 2 structures (43317 atoms, 43742
bonds)
> select ligand
148 atoms, 154 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL502182.png
> close
> open combo-CHEMBL512551.mae
Chain information for combo-CHEMBL512551.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL512551.mae containing 2 structures (36756 atoms, 37098
bonds)
> select ligand
102 atoms, 108 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL512551.png
> close
> open combo-CHEMBL516847.mae
Chain information for combo-CHEMBL516847.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL516847.mae containing 2 structures (43257 atoms, 43680
bonds)
> select ligand
88 atoms, 92 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL516847.png
> close
> open combo-CHEMBL521025.mae
Chain information for combo-CHEMBL521025.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL521025.mae containing 2 structures (43287 atoms, 43712
bonds)
> select ligand
118 atoms, 124 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL521025.png
> close
> open combo-CHEMBL522143.mae
Chain information for combo-CHEMBL522143.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL522143.mae containing 2 structures (43295 atoms, 43726
bonds)
> select ligand
126 atoms, 138 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL522143.png
> close
> open combo-CHEMBL524126.mae
Chain information for combo-CHEMBL524126.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL524126.mae containing 2 structures (43321 atoms, 43748
bonds)
> select ligand
152 atoms, 160 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL524126.png
> close
> open combo-CHEMBL524443.mae
Chain information for combo-CHEMBL524443.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL524443.mae containing 2 structures (43313 atoms, 43736
bonds)
> select ligand
144 atoms, 148 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL524443.png
> close
> open combo-CHEMBL526307.mae
Chain information for combo-CHEMBL526307.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL526307.mae containing 2 structures (36730 atoms, 37068
bonds)
> select ligand
76 atoms, 78 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL526307.png
> close
> open combo-CHEMBL555196.mae
Chain information for combo-CHEMBL555196.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL555196.mae containing 2 structures (43339 atoms, 43768
bonds)
> select ligand
170 atoms, 180 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL555196.png
> close
> open combo-CHEMBL558322.mae
Chain information for combo-CHEMBL558322.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL558322.mae containing 2 structures (43283 atoms, 43704
bonds)
> select ligand
114 atoms, 116 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL558322.png
> close
> open combo-CHEMBL558488.mae
Chain information for combo-CHEMBL558488.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL558488.mae containing 2 structures (43361 atoms, 43784
bonds)
> select ligand
192 atoms, 196 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL558488.png
> close
> open combo-CHEMBL560895.mae
Chain information for combo-CHEMBL560895.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL560895.mae containing 2 structures (43289 atoms, 43714
bonds)
> select ligand
120 atoms, 126 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL560895.png
> close
> open combo-CHEMBL566515.mae
Chain information for combo-CHEMBL566515.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL566515.mae containing 2 structures (43269 atoms, 43696
bonds)
> select ligand
100 atoms, 108 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL566515.png
> close
> open combo-CHEMBL568005.mae
Chain information for combo-CHEMBL568005.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL568005.mae containing 2 structures (36724 atoms, 37064
bonds)
> select ligand
70 atoms, 74 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL568005.png
> close
> open combo-CHEMBL570023.mae
Chain information for combo-CHEMBL570023.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL570023.mae containing 2 structures (43261 atoms, 43684
bonds)
> select ligand
92 atoms, 96 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL570023.png
> close
> open combo-CHEMBL570745.mae
Chain information for combo-CHEMBL570745.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL570745.mae containing 2 structures (43315 atoms, 43738
bonds)
> select ligand
146 atoms, 150 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL570745.png
> close
> open combo-CHEMBL571818.mae
Chain information for combo-CHEMBL571818.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL571818.mae containing 2 structures (36730 atoms, 37072
bonds)
> select ligand
76 atoms, 82 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL571818.png
> close
> open combo-CHEMBL572246.mae
Chain information for combo-CHEMBL572246.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL572246.mae containing 2 structures (43299 atoms, 43722
bonds)
> select ligand
130 atoms, 134 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL572246.png
> close
> open combo-CHEMBL593046.mae
Chain information for combo-CHEMBL593046.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL593046.mae containing 2 structures (43337 atoms, 43766
bonds)
> select ligand
168 atoms, 178 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL593046.png
> close
> open combo-CHEMBL593315.mae
Chain information for combo-CHEMBL593315.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL593315.mae containing 2 structures (43309 atoms, 43736
bonds)
> select ligand
140 atoms, 148 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL593315.png
> close
> open combo-CHEMBL597032.mae
Chain information for combo-CHEMBL597032.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL597032.mae containing 2 structures (36778 atoms, 37120
bonds)
> select ligand
124 atoms, 130 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL597032.png
> close
> open combo-CHEMBL599264.mae
Chain information for combo-CHEMBL599264.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL599264.mae containing 2 structures (43287 atoms, 43712
bonds)
> select ligand
118 atoms, 124 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL599264.png
> close
> open combo-CHEMBL601719.mae
Chain information for combo-CHEMBL601719.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL601719.mae containing 2 structures (43275 atoms, 43700
bonds)
> select ligand
106 atoms, 112 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL601719.png
> close
> open combo-CHEMBL603668.mae
Chain information for combo-CHEMBL603668.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL603668.mae containing 2 structures (36762 atoms, 37106
bonds)
> select ligand
108 atoms, 116 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL603668.png
> close
> open combo-CHEMBL604087.mae
Chain information for combo-CHEMBL604087.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL604087.mae containing 2 structures (43291 atoms, 43716
bonds)
> select ligand
122 atoms, 128 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL604087.png
> close
> open combo-CHEMBL604798.mae
Chain information for combo-CHEMBL604798.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL604798.mae containing 2 structures (36730 atoms, 37072
bonds)
> select ligand
76 atoms, 82 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL604798.png
> close
> open combo-CHEMBL634.mae
Chain information for combo-CHEMBL634.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL634.mae containing 2 structures (43293 atoms, 43716 bonds)
> select ligand
124 atoms, 128 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL634.png
> close
> open combo-CHEMBL7568.mae
Chain information for combo-CHEMBL7568.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL7568.mae containing 2 structures (43289 atoms, 43712 bonds)
> select ligand
120 atoms, 124 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL7568.png
> close
> open combo-CHEMBL80.mae
Chain information for combo-CHEMBL80.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL80.mae containing 2 structures (36746 atoms, 37090 bonds)
> select ligand
92 atoms, 100 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL80.png
> close
> open combo-CHEMBL945.mae
Chain information for combo-CHEMBL945.mae
---
Chain | Description
1.1/A 1.2/A | No description available
Opened combo-CHEMBL945.mae containing 2 structures (36700 atoms, 37036 bonds)
> select ligand
46 atoms, 46 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL945.png
> close
> open combo-CHEMBL99946.mae
Chain information for combo-CHEMBL99946.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL99946.mae containing 2 structures (43251 atoms, 43672
bonds)
> select ligand
82 atoms, 84 bonds, 2 residues, 2 models selected
> view sel
> save combo-CHEMBL99946.png
> close
executed test.py
> open combo-CHEMBL2396664.mae
Chain information for combo-CHEMBL2396664.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2396664.mae containing 2 structures (43265 atoms, 43688
bonds)
> open combo-CHEMBL2396664.mae
Chain information for combo-CHEMBL2396664.mae
---
Chain | Description
2.1/A 2.2/A | No description available
2.2/B | No description available
2.2/C | No description available
Opened combo-CHEMBL2396664.mae containing 2 structures (43265 atoms, 43688
bonds)
> measure center #1.1 & ligand
Center of mass of 48 atoms = (161.74, 163.08, 158.28)
> measure center #1.1 :310,335,728,759
Center of mass of 81 atoms = (155.30, 168.24, 154.79)
> hide #!2 models
> show #!2 models
> hide #2.1 models
> show #2.1 models
> hide #2.2 models
> show #2.2 models
> distance #2.1 #2.2
Expected exactly two atoms and/or measurable objects (e.g. axes, planes), got
43265
> close
> open combo-CHEMBL2396664.mae
Chain information for combo-CHEMBL2396664.mae
---
Chain | Description
1.1/A 1.2/A | No description available
1.2/B | No description available
1.2/C | No description available
Opened combo-CHEMBL2396664.mae containing 2 structures (43265 atoms, 43688
bonds)
> measure center #1.1 & ligand mark true
Center of mass of 48 atoms = (161.74, 163.08, 158.28)
> measure center #1.1 :310,335,728,759 mark true
Center of mass of 81 atoms = (155.30, 168.24, 154.79)
> distance #3 #4
Expected exactly two atoms and/or measurable objects (e.g. axes, planes), got
1
> distance #2 #3
Distance between combo-CHEMBL2396664.mae center 48 atoms #2/M mark 1 M and
combo-CHEMBL2396664.mae center 81 atoms #3/M mark 1 M: 8.962Å
> open C:/Users/arangarajan/Documents/0-workdir/020922/0-combo/RMSD-distance-
> final-2.cxc
> cd C:\Users\arangarajan\Documents\0-workdir\020922\0-combo
Current working directory is:
C:\Users\arangarajan\Documents\0-workdir\020922\0-combo
> delete /B,C
> view orient
> show ligand
> select ligand
96 atoms, 100 bonds, 2 residues, 2 models selected
> style ball
Changed 36752 atom styles
> select #1.1 & ligand & C
20 atoms, 20 bonds, 1 residue, 1 model selected
> color sel green yellow
> select #1.1 & protein
18327 atoms, 18495 bonds, 1164 residues, 1 model selected
> color sel olive drab target c
> select #1.2 & ligand & C
20 atoms, 20 bonds, 1 residue, 1 model selected
> color sel deep pink
> select #1.2 & protein
18327 atoms, 18495 bonds, 1164 residues, 1 model selected
> color sel pink target c
> measure center #1.1 & ligand mark true
Center of mass of 48 atoms = (161.74, 163.08, 158.28)
> color #3 lime
> measure center #1.2 & ligand mark true
Center of mass of 48 atoms = (162.39, 166.17, 156.29)
> color #4 hot pink
> measure center #1.1 :310,335,728,759 mark true
Center of mass of 81 atoms = (155.30, 168.24, 154.79)
> color #5 chartreuse
> measure center #1.2 :310,335,728,759 mark true
Center of mass of 81 atoms = (155.46, 167.78, 154.28)
> color #6 crimson
> rmsd #1.2 & ligand to #1.1 & ligand
RMSD between 48 atom pairs is 7.419
> distance #3 #5
Distance between combo-CHEMBL2396664.mae center 81 atoms #3/M mark 1 M and
combo-CHEMBL2396664.mae center 48 atoms #5/M mark 1 M: 8.962Å
> distance #4 #6
Expected exactly two atoms and/or measurable objects (e.g. axes, planes), got
1
> open C:/Users/arangarajan/Documents/0-workdir/020922/RMSD-distance.cxc
> delete /B,C
> rmsd #1.3 & ligand to #1.2
Number of atoms from first atom spec (0) differs from number in second (18375)
> pwd
Current working directory is:
C:\Users\arangarajan\Documents\0-workdir\020922\0-combo
> ~select
Nothing selected
> open RMSD-distance-final-2.cxc foreach *.mae
'foreach' has no suffix
OpenGL version: 3.3.0 NVIDIA 496.49
OpenGL renderer: NVIDIA GeForce GTX 1650 Ti/PCIe/SSE2
OpenGL vendor: NVIDIA Corporation
Manufacturer: Dell Inc.
Model: XPS 15 9500
OS: Microsoft Windows 11 Pro Insider Preview (Build 22543)
Memory: 16,912,158,720
MaxProcessMemory: 137,438,953,344
CPU: 16 Intel(R) Core(TM) i7-10875H CPU @ 2.30GHz
OSLanguage: en-US
Locale: ('en_US', 'cp1252')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
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appdirs: 1.4.4
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2020.12.5
cftime: 1.5.0
chardet: 3.0.4
ChimeraX-AddCharge: 1.0.1
ChimeraX-AddH: 2.1.6
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.13.2
ChimeraX-AtomicLibrary: 3.1.3
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 1.1
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.5.2
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.1
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.1
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.2.1
ChimeraX-CommandLine: 1.1.4
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.2.5
ChimeraX-CoreFormats: 1.0
ChimeraX-coulombic: 1.1.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.1
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.3
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.0
ChimeraX-Hbonds: 2.1
ChimeraX-Help: 1.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.0
ChimeraX-ImageFormats: 1.1
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-Label: 1.0
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.2
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.0.2
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.0
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 1.2.1
ChimeraX-MDcrds: 2.2
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.3
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.0.1
ChimeraX-ModelPanel: 1.0.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.1
ChimeraX-OpenCommand: 1.5
ChimeraX-PDB: 2.4.1
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.1
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.0.1
ChimeraX-ReadPbonds: 1.0
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.4
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SeqView: 2.3
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.0
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.0.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.3.1
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.0.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.7.6
ChimeraX-uniprot: 2.1
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.3
comtypes: 1.1.7
cxservices: 1.0
cycler: 0.10.0
Cython: 0.29.21
decorator: 5.0.9
distlib: 0.3.1
docutils: 0.16
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 2.10.0
html2text: 2020.1.16
idna: 2.10
ihm: 0.17
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imagesize: 1.2.0
ipykernel: 5.3.4
ipython: 7.18.1
ipython-genutils: 0.2.0
jedi: 0.17.2
Jinja2: 2.11.2
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kiwisolver: 1.3.1
line-profiler: 2.1.2
lxml: 4.6.2
lz4: 3.1.0
MarkupSafe: 2.0.1
matplotlib: 3.3.2
msgpack: 1.0.0
netCDF4: 1.5.4
networkx: 2.5
numexpr: 2.7.3
numpy: 1.19.2
numpydoc: 1.1.0
openvr: 1.14.1501
packaging: 20.9
ParmEd: 3.2.0
parso: 0.7.1
pickleshare: 0.7.5
Pillow: 7.2.0
pip: 21.0.1
pkginfo: 1.5.0.1
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pycollada: 0.7.1
pydicom: 2.0.0
Pygments: 2.7.1
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 2.4.7
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.1
pytz: 2021.1
pywin32: 228
pyzmq: 22.0.3
qtconsole: 4.7.7
QtPy: 1.9.0
RandomWords: 0.3.0
requests: 2.24.0
scipy: 1.5.2
setuptools: 50.3.2
sfftk-rw: 0.6.7.dev1
six: 1.15.0
snowballstemmer: 2.1.0
sortedcontainers: 2.2.2
Sphinx: 3.2.1
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tables: 3.6.1
tifffile: 2020.9.3
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.0.5
urllib3: 1.25.11
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.36.0
wheel-filename: 1.3.0
WMI: 1.5.1
File attachment: RMSD-distance-final-2.cxc
Attachments (1)
Change History (3)
by , 4 years ago
| Attachment: | RMSD-distance-final-2.cxc added |
|---|
comment:1 by , 4 years ago
| Component: | Unassigned → Input/Output |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → 'forEachFile' keyword: 'foreach' has no suffix |
comment:2 by , 4 years ago
| Resolution: | → not a bug |
|---|---|
| Status: | accepted → closed |
'forEachFile' only available in 1.3+
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