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Opened 3 years ago
Closed 3 years ago
#8378 closed defect (can't reproduce)
Unknown crash at startup
| Reported by: | Owned by: | Eric Pettersen | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | Tom Goddard | |
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.16-x86_64-i386-64bit
ChimeraX Version: 1.6.dev202301242251 (2023-01-24 22:51:10 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Bus error
Thread 0x00000001122f7e00 (most recent call first):
File "/private/var/folders/93/70qlyj7n10lbm_sxykgwx7zh0000gn/T/AppTranslocation/AC787C15-B64F-4156-A10A-1634CCD718FF/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 537 in __init__
File "/private/var/folders/93/70qlyj7n10lbm_sxykgwx7zh0000gn/T/AppTranslocation/AC787C15-B64F-4156-A10A-1634CCD718FF/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 200 in build
File "/private/var/folders/93/70qlyj7n10lbm_sxykgwx7zh0000gn/T/AppTranslocation/AC787C15-B64F-4156-A10A-1634CCD718FF/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 700 in init
File "/private/var/folders/93/70qlyj7n10lbm_sxykgwx7zh0000gn/T/AppTranslocation/AC787C15-B64F-4156-A10A-1634CCD718FF/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py", line 1043 in
File "/private/var/folders/93/70qlyj7n10lbm_sxykgwx7zh0000gn/T/AppTranslocation/AC787C15-B64F-4156-A10A-1634CCD718FF/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/private/var/folders/93/70qlyj7n10lbm_sxykgwx7zh0000gn/T/AppTranslocation/AC787C15-B64F-4156-A10A-1634CCD718FF/d/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main
Process: ChimeraX [49590]
Path: /private/var/folders/*/ChimeraX_Daily.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.6.0 (1.6.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [49590]
User ID: 501
Date/Time: 2023-01-27 16:52:52.706 -0500
OS Version: macOS 11.6.8 (20G730)
Report Version: 12
Bridge OS Version: 6.6 (19P6064)
Anonymous UUID: D7070213-1EF2-43EA-8B4E-53EF6A8C073A
Sleep/Wake UUID: 96D467F6-ADDA-4ED2-BCE6-190A2B94D6F9
Time Awake Since Boot: 510000 seconds
Time Since Wake: 18000000000000000000 seconds
System Integrity Protection: enabled
Crashed Thread: 6 Chrome_IOThread
Exception Type: EXC_BAD_ACCESS (SIGBUS)
Exception Codes: KERN_MEMORY_ERROR at 0x0000000118fd78c0
Exception Note: EXC_CORPSE_NOTIFY
VM Regions Near 0x118fd78c0:
mapped file 112338000-11421a000 [ 30.9M] r--/r-x SM=ALI Object_id=6fffeeff
--> mapped file 11421a000-11e896000 [166.5M] r-x/rwx SM=COW Object_id=708b9bff
mapped file 11e896000-11ef66000 [ 6976K] rw-/rwx SM=COW Object_id=70ac3bff
Thread 0:: CrBrowserMain
0 ??? 0x000000011019b112 0 + 4565086482
1 ??? 0x0000000110197323 0 + 4565070627
2 ??? 0x00000001101d8d7d 0 + 4565339517
3 ??? 0x00000001102ea313 0 + 4566459155
4 ??? 0x00000001102eae6b 0 + 4566462059
5 ??? 0x00000001102eaa89 0 + 4566461065
6 ??? 0x0000000110e254ea 0 + 4578235626
7 ??? 0x0000000110e9e17c 0 + 4578730364
8 ??? 0x0000000110ed73db 0 + 4578964443
9 ??? 0x0000000110ed6bc9 0 + 4578962377
10 ??? 0x0000000110d6f47d 0 + 4577490045
11 ??? 0x0000000110d6fb2a 0 + 4577491754
12 ??? 0x0000000110d8da4d 0 + 4577614413
13 ??? 0x00000001107f033f 0 + 4571726655
14 ??? 0x000000011099bcdb 0 + 4573478107
15 ??? 0x000000010680271d 0 + 4404029213
16 ??? 0x00000001067c35b7 0 + 4403770807
17 ??? 0x000000010689be9c 0 + 4404657820
18 ??? 0x00000001068992a2 0 + 4404646562
19 ??? 0x000000010689cb03 0 + 4404660995
20 ??? 0x00000001067c3cb1 0 + 4403772593
21 ??? 0x00000001067c3415 0 + 4403770389
22 ??? 0x00000001067c3f98 0 + 4403773336
23 ??? 0x000000010681db05 0 + 4404140805
24 ??? 0x0000000106818fb9 0 + 4404121529
25 ??? 0x00000001067c35b7 0 + 4403770807
26 ??? 0x000000010689be9c 0 + 4404657820
27 ??? 0x000000010689934b 0 + 4404646731
28 ??? 0x000000010689cb03 0 + 4404660995
29 ??? 0x00000001067c3cb1 0 + 4403772593
30 ??? 0x00000001067c5d6a 0 + 4403780970
31 ??? 0x000000010689be0c 0 + 4404657676
32 ??? 0x00000001068992a2 0 + 4404646562
33 ??? 0x000000010689cb03 0 + 4404660995
34 ??? 0x00000001067c3cb1 0 + 4403772593
35 ??? 0x000000010689be0c 0 + 4404657676
36 ??? 0x000000010689934b 0 + 4404646731
37 ??? 0x000000010689cb03 0 + 4404660995
38 ??? 0x0000000106892dab 0 + 4404620715
39 ??? 0x000000010688fc12 0 + 4404608018
40 ??? 0x0000000106802023 0 + 4404027427
41 ??? 0x000000010689be0c 0 + 4404657676
42 ??? 0x000000010689934b 0 + 4404646731
43 ??? 0x000000010689cb03 0 + 4404660995
44 ??? 0x00000001067c3cb1 0 + 4403772593
45 ??? 0x000000010689be0c 0 + 4404657676
46 ??? 0x000000010689934b 0 + 4404646731
47 ??? 0x000000010689cb03 0 + 4404660995
48 ??? 0x00000001067c3cb1 0 + 4403772593
49 ??? 0x0000000106902870 0 + 4405078128
50 ??? 0x0000000106901f87 0 + 4405075847
51 ??? 0x000000010690258f 0 + 4405077391
52 ??? 0x000000010690249b 0 + 4405077147
53 ??? 0x000000010677adc8 0 + 4403473864
54 ??? 0x00007fff2046cf3d 0 + 140733734899517
Thread 1:
0 ??? 0x00007fff2041ecce 0 + 140733734579406
1 ??? 0x000000010770a23f 0 + 4419789375
2 ??? 0x00007fff204518fc 0 + 140733734787324
3 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 2:
0 ??? 0x00007fff2044d420 0 + 140733734769696
Thread 3:: ThreadPoolServiceThread
0 ??? 0x00007fff204251c2 0 + 140733734605250
1 ??? 0x00000001186d8c4f 0 + 4704799823
2 ??? 0x0000000118679973 0 + 4704409971
3 ??? 0x0000000118631492 0 + 4704113810
4 ??? 0x00000001186a03d8 0 + 4704568280
5 ??? 0x000000011868642d 0 + 4704461869
6 ??? 0x00000001186a056a 0 + 4704568682
7 ??? 0x00000001186cbe18 0 + 4704747032
8 ??? 0x00007fff204518fc 0 + 140733734787324
9 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 4:: ThreadPoolForegroundWorker
0 ??? 0x00007fff2041c2aa 0 + 140733734568618
1 ??? 0x00007fff2041c61c 0 + 140733734569500
2 ??? 0x00000001186d2313 0 + 4704772883
3 ??? 0x0000000118692e2f 0 + 4704513583
4 ??? 0x00000001186939d7 0 + 4704516567
5 ??? 0x000000011869350d 0 + 4704515341
6 ??? 0x00000001186cbe18 0 + 4704747032
7 ??? 0x00007fff204518fc 0 + 140733734787324
8 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 5:: ThreadPoolBackgroundWorker
0 ??? 0x00007fff2041c2aa 0 + 140733734568618
1 ??? 0x00007fff2041c61c 0 + 140733734569500
2 ??? 0x00000001186d2313 0 + 4704772883
3 ??? 0x0000000118692e2f 0 + 4704513583
4 ??? 0x000000011869368c 0 + 4704515724
5 ??? 0x000000011869347d 0 + 4704515197
6 ??? 0x00000001186cbe18 0 + 4704747032
7 ??? 0x00007fff204518fc 0 + 140733734787324
8 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 6 Crashed:: Chrome_IOThread
0 ??? 0x00007fff2042291e 0 + 140733734594846
1 ??? 0x00007fff20335bd5 0 + 140733733624789
2 ??? 0x00007fff20496d7d 0 + 140733735071101
3 ??? 0x000000011666ffb7 0 + 4670816183
4 ??? 0x0000000118fd6abb 0 + 4714228411
5 ??? 0x0000000118fc5be3 0 + 4714159075
6 ??? 0x0000000118fc650c 0 + 4714161420
7 ??? 0x0000000118fb36d8 0 + 4714084056
8 ??? 0x0000000118fd5479 0 + 4714222713
9 ??? 0x0000000118fd5802 0 + 4714223618
10 ??? 0x0000000118fd4c50 0 + 4714220624
11 ??? 0x000000011666b05d 0 + 4670795869
12 ??? 0x000000011666a850 0 + 4670793808
13 ??? 0x0000000116666ded 0 + 4670778861
14 ??? 0x000000011665acc2 0 + 4670729410
15 ??? 0x000000011666ec78 0 + 4670811256
16 ??? 0x00000001186d9e0d 0 + 4704804365
17 ??? 0x00000001186d8e0e 0 + 4704800270
18 ??? 0x00000001186d8c4f 0 + 4704799823
19 ??? 0x0000000118679973 0 + 4704409971
20 ??? 0x0000000118631492 0 + 4704113810
21 ??? 0x00000001186a03d8 0 + 4704568280
22 ??? 0x0000000115ec1172 0 + 4662759794
23 ??? 0x00000001186a056a 0 + 4704568682
24 ??? 0x00000001186cbe18 0 + 4704747032
25 ??? 0x00007fff204518fc 0 + 140733734787324
26 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 7:: NetworkConfigWatcher
0 ??? 0x00007fff2041c2aa 0 + 140733734568618
1 ??? 0x00007fff2041c61c 0 + 140733734569500
2 ??? 0x00000001186d2313 0 + 4704772883
3 ??? 0x00000001186d20ff 0 + 4704772351
4 ??? 0x00000001185fd9e9 0 + 4703902185
5 ??? 0x0000000118679973 0 + 4704409971
6 ??? 0x0000000118631492 0 + 4704113810
7 ??? 0x00000001186a03d8 0 + 4704568280
8 ??? 0x00000001186a056a 0 + 4704568682
9 ??? 0x00000001186cbe18 0 + 4704747032
10 ??? 0x00007fff204518fc 0 + 140733734787324
11 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 8:: ThreadPoolForegroundWorker
0 ??? 0x00007fff2041c2aa 0 + 140733734568618
1 ??? 0x00007fff2041c61c 0 + 140733734569500
2 ??? 0x00000001186d2313 0 + 4704772883
3 ??? 0x0000000118692e2f 0 + 4704513583
4 ??? 0x00000001186939d7 0 + 4704516567
5 ??? 0x000000011869350d 0 + 4704515341
6 ??? 0x00000001186cbe18 0 + 4704747032
7 ??? 0x00007fff204518fc 0 + 140733734787324
8 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 9:: ThreadPoolForegroundWorker
0 ??? 0x00007fff2041c2aa 0 + 140733734568618
1 ??? 0x00007fff2041c61c 0 + 140733734569500
2 ??? 0x00000001186d2313 0 + 4704772883
3 ??? 0x0000000118692e2f 0 + 4704513583
4 ??? 0x00000001186939d7 0 + 4704516567
5 ??? 0x000000011869350d 0 + 4704515341
6 ??? 0x00000001186cbe18 0 + 4704747032
7 ??? 0x00007fff204518fc 0 + 140733734787324
8 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 10:: ThreadPoolForegroundWorker
0 ??? 0x00007fff2041c2aa 0 + 140733734568618
1 ??? 0x00007fff2041c61c 0 + 140733734569500
2 ??? 0x00000001186d2313 0 + 4704772883
3 ??? 0x0000000118692e2f 0 + 4704513583
4 ??? 0x00000001186939d7 0 + 4704516567
5 ??? 0x000000011869350d 0 + 4704515341
6 ??? 0x00000001186cbe18 0 + 4704747032
7 ??? 0x00007fff204518fc 0 + 140733734787324
8 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 11:: Chrome_InProcGpuThread
0 ??? 0x00007fff2041c2aa 0 + 140733734568618
1 ??? 0x00007fff2041c61c 0 + 140733734569500
2 ??? 0x00000001186d2313 0 + 4704772883
3 ??? 0x00000001186d20ff 0 + 4704772351
4 ??? 0x00000001185fd9e9 0 + 4703902185
5 ??? 0x0000000118679973 0 + 4704409971
6 ??? 0x0000000118631492 0 + 4704113810
7 ??? 0x00000001186a03d8 0 + 4704568280
8 ??? 0x00000001186a056a 0 + 4704568682
9 ??? 0x00000001186cbe18 0 + 4704747032
10 ??? 0x00007fff204518fc 0 + 140733734787324
11 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 12:: Chrome_ChildIOThread
0 ??? 0x00007fff204251c2 0 + 140733734605250
1 ??? 0x00000001186d8c4f 0 + 4704799823
2 ??? 0x0000000118679973 0 + 4704409971
3 ??? 0x0000000118631492 0 + 4704113810
4 ??? 0x00000001186a03d8 0 + 4704568280
5 ??? 0x000000011b320862 0 + 4751231074
6 ??? 0x00000001186a056a 0 + 4704568682
7 ??? 0x00000001186cbe18 0 + 4704747032
8 ??? 0x00007fff204518fc 0 + 140733734787324
9 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 13:: CompositorTileWorker1
0 ??? 0x00007fff2041ecce 0 + 140733734579406
1 ??? 0x00000001186ca7e2 0 + 4704741346
2 ??? 0x000000011a92f965 0 + 4740807013
3 ??? 0x00000001186cbe18 0 + 4704747032
4 ??? 0x00007fff204518fc 0 + 140733734787324
5 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 14:: ThreadPoolSingleThreadSharedForeground0
0 ??? 0x00007fff2041c2aa 0 + 140733734568618
1 ??? 0x00007fff2041c61c 0 + 140733734569500
2 ??? 0x00000001186d2313 0 + 4704772883
3 ??? 0x0000000118692e2f 0 + 4704513583
4 ??? 0x000000011869368c 0 + 4704515724
5 ??? 0x000000011869353d 0 + 4704515389
6 ??? 0x00000001186cbe18 0 + 4704747032
7 ??? 0x00007fff204518fc 0 + 140733734787324
8 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 15:: VizCompositorThread
0 ??? 0x00007fff2041c2aa 0 + 140733734568618
1 ??? 0x00007fff2041c61c 0 + 140733734569500
2 ??? 0x00000001186d2313 0 + 4704772883
3 ??? 0x00000001186d20ff 0 + 4704772351
4 ??? 0x00000001185fd9e9 0 + 4703902185
5 ??? 0x0000000118679973 0 + 4704409971
6 ??? 0x0000000118631492 0 + 4704113810
7 ??? 0x00000001186a03d8 0 + 4704568280
8 ??? 0x00000001186a056a 0 + 4704568682
9 ??? 0x00000001186cbe18 0 + 4704747032
10 ??? 0x00007fff204518fc 0 + 140733734787324
11 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 16:: NetworkConfigWatcher
0 ??? 0x00007fff2041c2aa 0 + 140733734568618
1 ??? 0x00007fff2041c61c 0 + 140733734569500
2 ??? 0x00000001186d2313 0 + 4704772883
3 ??? 0x00000001186d20ff 0 + 4704772351
4 ??? 0x00000001185fd9e9 0 + 4703902185
5 ??? 0x0000000118679973 0 + 4704409971
6 ??? 0x0000000118631492 0 + 4704113810
7 ??? 0x00000001186a03d8 0 + 4704568280
8 ??? 0x00000001186a056a 0 + 4704568682
9 ??? 0x00000001186cbe18 0 + 4704747032
10 ??? 0x00007fff204518fc 0 + 140733734787324
11 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 17:: NetworkService
0 ??? 0x00007fff204251c2 0 + 140733734605250
1 ??? 0x00000001186d8c4f 0 + 4704799823
2 ??? 0x0000000118679973 0 + 4704409971
3 ??? 0x0000000118631492 0 + 4704113810
4 ??? 0x00000001186a03d8 0 + 4704568280
5 ??? 0x00000001186a056a 0 + 4704568682
6 ??? 0x00000001186cbe18 0 + 4704747032
7 ??? 0x00007fff204518fc 0 + 140733734787324
8 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 18:: NetworkConfigWatcher
0 ??? 0x00007fff2041c2aa 0 + 140733734568618
1 ??? 0x00007fff2041c61c 0 + 140733734569500
2 ??? 0x00000001186d2313 0 + 4704772883
3 ??? 0x00000001186d20ff 0 + 4704772351
4 ??? 0x00000001185fd9e9 0 + 4703902185
5 ??? 0x0000000118679973 0 + 4704409971
6 ??? 0x0000000118631492 0 + 4704113810
7 ??? 0x00000001186a03d8 0 + 4704568280
8 ??? 0x00000001186a056a 0 + 4704568682
9 ??? 0x00000001186cbe18 0 + 4704747032
10 ??? 0x00007fff204518fc 0 + 140733734787324
11 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 19:: ThreadPoolSingleThreadForegroundBlocking1
0 ??? 0x00007fff2041c2aa 0 + 140733734568618
1 ??? 0x00007fff2041c61c 0 + 140733734569500
2 ??? 0x00000001186d2313 0 + 4704772883
3 ??? 0x0000000118692e2f 0 + 4704513583
4 ??? 0x00000001186939d7 0 + 4704516567
5 ??? 0x000000011869356d 0 + 4704515437
6 ??? 0x00000001186cbe18 0 + 4704747032
7 ??? 0x00007fff204518fc 0 + 140733734787324
8 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 20:
0 ??? 0x00007fff2044d420 0 + 140733734769696
Thread 21:
0 ??? 0x00007fff2044d420 0 + 140733734769696
Thread 22:
0 ??? 0x00007fff2044d420 0 + 140733734769696
Thread 23:: Thread (pooled)
0 ??? 0x00007fff2041ecce 0 + 140733734579406
1 ??? 0x000000011031d04c 0 + 4566667340
2 ??? 0x000000011031cd4e 0 + 4566666574
3 ??? 0x000000011031cc9e 0 + 4566666398
4 ??? 0x00000001103174f5 0 + 4566643957
5 ??? 0x0000000110313093 0 + 4566626451
6 ??? 0x00007fff204518fc 0 + 140733734787324
7 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 24:: Thread (pooled)
0 ??? 0x00007fff2041ecce 0 + 140733734579406
1 ??? 0x000000011031d04c 0 + 4566667340
2 ??? 0x000000011031cd4e 0 + 4566666574
3 ??? 0x000000011031cc9e 0 + 4566666398
4 ??? 0x00000001103174f5 0 + 4566643957
5 ??? 0x0000000110313093 0 + 4566626451
6 ??? 0x00007fff204518fc 0 + 140733734787324
7 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 25:: Thread (pooled)
0 ??? 0x00007fff2041ecce 0 + 140733734579406
1 ??? 0x000000011031d04c 0 + 4566667340
2 ??? 0x000000011031cd4e 0 + 4566666574
3 ??? 0x000000011031cc9e 0 + 4566666398
4 ??? 0x00000001103174f5 0 + 4566643957
5 ??? 0x0000000110313093 0 + 4566626451
6 ??? 0x00007fff204518fc 0 + 140733734787324
7 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 26:: Thread (pooled)
0 ??? 0x00007fff2041ecce 0 + 140733734579406
1 ??? 0x000000011031d04c 0 + 4566667340
2 ??? 0x000000011031cd4e 0 + 4566666574
3 ??? 0x000000011031cc9e 0 + 4566666398
4 ??? 0x00000001103174f5 0 + 4566643957
5 ??? 0x0000000110313093 0 + 4566626451
6 ??? 0x00007fff204518fc 0 + 140733734787324
7 ??? 0x00007fff2044d443 0 + 140733734769731
Thread 6 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x00007000030d4000 rcx: 0x00007000030d2d18 rdx: 0x0000000000000000
rdi: 0x000000000000ae03 rsi: 0x000000000000000a rbp: 0x00007000030d2d40 rsp: 0x00007000030d2d18
r8: 0x00007000030d3200 r9: 0x6e6feb258ab9a019 r10: 0x00007000030d4000 r11: 0x0000000000000246
r12: 0x000000000000ae03 r13: 0x000060000315d000 r14: 0x000000000000000a r15: 0x0000000000000016
rip: 0x00007fff2042291e rfl: 0x0000000000000246 cr2: 0x000000011019b112
Logical CPU: 0
Error Code: 0x00000014 (no mapping for user instruction read)
Trap Number: 14
Thread 6 instruction stream not available.
Thread 6 last branch register state not available.
Binary Images:
0 - 0xffffffffffffffff +ChimeraX (???) /private/var/folders/*/ChimeraX_Daily.app/Contents/MacOS/ChimeraX
0x112220000 - 0x1122bbfff dyld (852.2) /usr/lib/dyld
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=848K resident=0K(0%) swapped_out_or_unallocated=848K(100%)
Writable regions: Total=864.0M written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=864.0M(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Activity Tracing 256K 1
CoreAnimation 4K 1
Foundation 16K 1
IOKit 7940K 1
Kernel Alloc Once 8K 1
MALLOC 261.8M 246
MALLOC guard page 32K 8
MALLOC_LARGE (reserved) 640K 2 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)
Mach message 8K 2
STACK GUARD 56.1M 27
Stack 148.7M 27
VM_ALLOCATE 64.2M 13
VM_ALLOCATE (reserved) 12K 1 reserved VM address space (unallocated)
__DATA 224K 2
__DATA_CONST 32K 1
__LINKEDIT 240K 2
__TEXT 624K 1
dylib 3532K 14
dylib (reserved) 800K 99 reserved VM address space (unallocated)
mapped file 424.5M 399
shared memory 744K 13
=========== ======= =======
TOTAL 1.3G 863
TOTAL, minus reserved VM space 968.6M 863
Log:
UCSF ChimeraX version: 1.6.dev202301242251 (2023-01-24)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
OpenGL version: 4.1 INTEL-16.5.13
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics OpenGL Engine (1x6x8 (fused) LP
OpenGL vendor: Intel Inc.
Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.4.0, Qt 6.4.0
Qt runtime version: 6.4.2
Qt platform: cocoa
Hardware:
Hardware Overview:
Model Name: MacBook Air
Model Identifier: MacBookAir9,1
Processor Name: Dual-Core Intel Core i3
Processor Speed: 1.1 GHz
Number of Processors: 1
Total Number of Cores: 2
L2 Cache (per Core): 512 KB
L3 Cache: 4 MB
Hyper-Threading Technology: Enabled
Memory: 8 GB
System Firmware Version: 1731.140.2.0.0 (iBridge: 19.16.16064.0.0,0)
Software:
System Software Overview:
System Version: macOS 11.6.8 (20G730)
Kernel Version: Darwin 20.6.0
Time since boot: 61 days 53 minutes
Graphics/Displays:
Intel Iris Plus Graphics:
Chipset Model: Intel Iris Plus Graphics
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x8a5c
Revision ID: 0x0007
Metal Family: Supported, Metal GPUFamily macOS 2
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal
Installed Packages:
alabaster: 0.7.13
appdirs: 1.4.4
appnope: 0.1.3
asttokens: 2.2.1
Babel: 2.11.0
backcall: 0.2.0
blockdiag: 3.0.0
build: 0.8.0
certifi: 2021.10.8
cftime: 1.6.2
charset-normalizer: 2.1.1
ChimeraX-AddCharge: 1.5.8
ChimeraX-AddH: 2.2.3
ChimeraX-AlignmentAlgorithms: 2.0.1
ChimeraX-AlignmentHdrs: 3.3.1
ChimeraX-AlignmentMatrices: 2.1
ChimeraX-Alignments: 2.8
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.3
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.1
ChimeraX-Atomic: 1.43.6
ChimeraX-AtomicLibrary: 10.0.2
ChimeraX-AtomSearch: 2.0.1
ChimeraX-AxesPlanes: 2.3.2
ChimeraX-BasicActions: 1.1.2
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.1.2
ChimeraX-BondRot: 2.0.1
ChimeraX-BugReporter: 1.0.1
ChimeraX-BuildStructure: 2.7.2
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.2
ChimeraX-ButtonPanel: 1.0.1
ChimeraX-CageBuilder: 1.0.1
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.3.2
ChimeraX-ChangeChains: 1.0.2
ChimeraX-CheckWaters: 1.3.1
ChimeraX-ChemGroup: 2.0.1
ChimeraX-Clashes: 2.2.4
ChimeraX-ColorActions: 1.0.3
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5.3
ChimeraX-CommandLine: 1.2.5
ChimeraX-ConnectStructure: 2.0.1
ChimeraX-Contacts: 1.0.1
ChimeraX-Core: 1.6.dev202301242251
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.4.2
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0.1
ChimeraX-DataFormats: 1.2.3
ChimeraX-Dicom: 1.1
ChimeraX-DistMonitor: 1.3.2
ChimeraX-DockPrep: 1.1
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ESMFold: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0.1
ChimeraX-FunctionKey: 1.0.1
ChimeraX-Geometry: 1.2.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1.1
ChimeraX-Hbonds: 2.4
ChimeraX-Help: 1.2.1
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0.1
ChimeraX-Label: 1.1.7
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.5
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.2
ChimeraX-Map: 1.1.4
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0.1
ChimeraX-MapFilter: 2.0.1
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1.1
ChimeraX-Markers: 1.0.1
ChimeraX-Mask: 1.0.2
ChimeraX-MatchMaker: 2.0.11
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.2
ChimeraX-Meeting: 1.0.1
ChimeraX-MLP: 1.1.1
ChimeraX-mmCIF: 2.11
ChimeraX-MMTF: 2.2
ChimeraX-Modeller: 1.5.8
ChimeraX-ModelPanel: 1.3.6
ChimeraX-ModelSeries: 1.0.1
ChimeraX-Mol2: 2.0
ChimeraX-Mole: 1.0
ChimeraX-Morph: 1.0.2
ChimeraX-MouseModes: 1.2
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.3
ChimeraX-OpenCommand: 1.10
ChimeraX-PDB: 2.6.12
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0.1
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-RenderByAttr: 1.0
ChimeraX-RenumberResidues: 1.1
ChimeraX-ResidueFit: 1.0.1
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 3.0
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5.1
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0.1
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0.1
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.8.1
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0.1
ChimeraX-Shortcuts: 1.1.1
ChimeraX-ShowSequences: 1.0.1
ChimeraX-SideView: 1.0.1
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.10.1
ChimeraX-STL: 1.0.1
ChimeraX-Storm: 1.0
ChimeraX-StructMeasure: 1.1.1
ChimeraX-Struts: 1.0.1
ChimeraX-Surface: 1.0.1
ChimeraX-SwapAA: 2.0.1
ChimeraX-SwapRes: 2.2
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1.2
ChimeraX-ToolshedUtils: 1.2.1
ChimeraX-Topography: 1.0
ChimeraX-Tug: 1.0.1
ChimeraX-UI: 1.26
ChimeraX-uniprot: 2.2.2
ChimeraX-UnitCell: 1.0.1
ChimeraX-ViewDockX: 1.1.6
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0.1
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0.2
ChimeraX-WebServices: 1.1.1
ChimeraX-Zone: 1.0.1
colorama: 0.4.5
comm: 0.1.2
contourpy: 1.0.7
cxservices: 1.2.2
cycler: 0.11.0
Cython: 0.29.32
debugpy: 1.6.6
decorator: 5.1.1
docutils: 0.19
entrypoints: 0.4
executing: 1.2.0
filelock: 3.7.1
fonttools: 4.38.0
funcparserlib: 1.0.1
grako: 3.16.5
h5py: 3.8.0
html2text: 2020.1.16
idna: 3.4
ihm: 0.35
imagecodecs: 2022.9.26
imagesize: 1.4.1
importlib-metadata: 6.0.0
ipykernel: 6.19.2
ipython: 8.7.0
ipython-genutils: 0.2.0
jedi: 0.18.2
Jinja2: 3.1.2
jupyter-client: 7.4.8
jupyter-core: 5.1.5
kiwisolver: 1.4.4
line-profiler: 3.5.1
lxml: 4.9.1
lz4: 4.0.2
MarkupSafe: 2.1.2
matplotlib: 3.6.2
matplotlib-inline: 0.1.6
msgpack: 1.0.4
nest-asyncio: 1.5.6
netCDF4: 1.6.0
networkx: 2.8.8
numexpr: 2.8.4
numpy: 1.23.5
openvr: 1.23.701
packaging: 21.3
ParmEd: 3.4.3
parso: 0.8.3
pep517: 0.13.0
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 9.3.0
pip: 22.2.2
pkginfo: 1.8.3
platformdirs: 2.6.2
prompt-toolkit: 3.0.36
psutil: 5.9.4
ptyprocess: 0.7.0
pure-eval: 0.2.2
pycollada: 0.7.2
pydicom: 2.3.0
Pygments: 2.12.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.9
PyQt6-commercial: 6.4.0
PyQt6-Qt6: 6.4.2
PyQt6-sip: 13.4.0
PyQt6-WebEngine-commercial: 6.4.0
PyQt6-WebEngine-Qt6: 6.4.2
python-dateutil: 2.8.2
pytz: 2022.7.1
pyzmq: 25.0.0
qtconsole: 5.4.0
QtPy: 2.3.0
RandomWords: 0.4.0
requests: 2.28.1
scipy: 1.9.3
setuptools: 65.1.1
setuptools-scm: 7.0.5
sfftk-rw: 0.7.2
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
Sphinx: 5.1.1
sphinx-autodoc-typehints: 1.19.1
sphinxcontrib-applehelp: 1.0.4
sphinxcontrib-blockdiag: 3.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
stack-data: 0.6.2
tables: 3.7.0
tifffile: 2022.10.10
tinyarray: 1.2.4
tomli: 2.0.1
tornado: 6.2
traitlets: 5.8.0
typing-extensions: 4.4.0
urllib3: 1.26.14
wcwidth: 0.2.6
webcolors: 1.12
wheel: 0.37.1
wheel-filename: 1.4.1
zipp: 3.11.0
Change History (2)
comment:1 by , 3 years ago
| Cc: | added |
|---|---|
| Component: | Unassigned → Core |
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → accepted |
| Summary: | ChimeraX bug report submission → Unknown crash at startup |
comment:2 by , 3 years ago
| Resolution: | → can't reproduce |
|---|---|
| Status: | accepted → closed |
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