![[ChimeraX Issue Tracking System]](/trac/ChimeraX/chrome/site/ChimeraX-icon.svg){kind=icon}
Opened 3 years ago
Closed 3 years ago
#8701 closed defect (nonchimerax)
Graphics crash, macOS 10.15.7, Intel Iris Plus Graphics
| Reported by: | Owned by: | Tom Goddard | |
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Graphics | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: macOS-10.15.7-x86_64-i386-64bit
ChimeraX Version: 1.3rc202111192158 (2021-11-19 21:58:21 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Aborted
Current thread 0x000000010a3f2dc0 (most recent call first):
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/opengl.py", line 2704 in draw_elements
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/drawing.py", line 1696 in draw
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/drawing.py", line 824 in _draw_geometry
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/drawing.py", line 759 in draw_self
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/drawing.py", line 752 in draw
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/drawing.py", line 1512 in _draw_multiple
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/drawing.py", line 1499 in draw_opaque
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/view.py", line 235 in _draw_scene
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/graphics/view.py", line 165 in draw
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/sideview/tool.py", line 276 in render
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/sideview/tool.py", line 112 in _redraw
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/triggerset.py", line 134 in invoke
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/triggerset.py", line 217 in _activate
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/triggerset.py", line 186 in activate
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/triggerset.py", line 354 in activate_trigger
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 89 in draw_new_frame
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 139 in _redraw_timer_callback
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py", line 301 in event_loop
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 867 in init
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py", line 1018 in
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 87 in _run_code
File "/private/var/folders/_l/0x4v6l193l19pjgdq16vhjm00000gn/T/AppTranslocation/162FE342-4C68-40A2-9ED0-C7626265B421/d/ChimeraX-1.3-rc2021.11.19.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py", line 197 in _run_module_as_main
Process: ChimeraX [84103]
Path: /private/var/folders/*/ChimeraX-1.3-rc2021.11.19.app/Contents/MacOS/ChimeraX
Identifier: edu.ucsf.cgl.ChimeraX
Version: 1.3.0 (1.3.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: ChimeraX [84103]
User ID: 501
Date/Time: 2023-03-23 04:43:53.442 +0000
OS Version: Mac OS X 10.15.7 (19H2026)
Report Version: 12
Bridge OS Version: 7.0 (20P411)
Anonymous UUID: B53A8187-D0BF-351C-B34E-B95E49425457
Sleep/Wake UUID: 79F61BD3-8086-49E0-9646-617EB88D9DDF
Time Awake Since Boot: 64000 seconds
Time Since Wake: 5900 seconds
System Integrity Protection: enabled
Notes: Translocated Process
Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread
Exception Type: EXC_CRASH (SIGABRT)
Exception Codes: 0x0000000000000000, 0x0000000000000000
Exception Note: EXC_CORPSE_NOTIFY
Application Specific Information:
abort() called
Application Specific Signatures:
Graphics hardware encountered an error and was reset: 0x00000813
Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff7321232a __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff732cee60 pthread_kill + 430
2 libsystem_c.dylib 0x00007fff7312993e raise + 26
3 libsystem_platform.dylib 0x00007fff732c35fd _sigtramp + 29
4 ??? 000000000000000000 0 + 0
5 libsystem_c.dylib 0x00007fff73199808 abort + 120
6 libGPUSupportMercury.dylib 0x00007fff5a7000a5 gpusGenerateCrashLog.cold.1 + 95
7 libGPUSupportMercury.dylib 0x00007fff5a6f718f gpusGenerateCrashLog + 89
8 com.apple.driver.AppleIntelICLGraphicsGLDriver 0x00007fff306b2b28 gpusKillClientExt + 9
9 libGPUSupportMercury.dylib 0x00007fff5a6f86a1 gpusSubmitDataBuffers + 490
10 com.apple.driver.AppleIntelICLGraphicsGLDriver 0x00007fff2f920280 IntelCommandBuffer::getNew(GLDContextRec*) + 48
11 com.apple.driver.AppleIntelICLGraphicsGLDriver 0x00007fff2f92006c intelSubmitCommands + 171
12 com.apple.driver.AppleIntelICLGraphicsGLDriver 0x00007fff2f913708 updateDispatch + 6403
13 GLEngine 0x00007fff43e6f74c gleDoDrawDispatchCoreGL3 + 693
14 GLEngine 0x00007fff43e43fb6 glDrawElementsInstanced_ACC_GL3Exec + 290
15 libffi.dylib 0x00007fff70e6c905 ffi_call_unix64 + 85
16 libffi.dylib 0x00007fff70e6c244 ffi_call_int + 694
17 _ctypes.cpython-39-darwin.so 0x00000001090ccead _ctypes_callproc + 1037
18 _ctypes.cpython-39-darwin.so 0x00000001090c6c36 PyCFuncPtr_call + 1206
19 org.python.python 0x00000001026a16cc _PyObject_Call + 140
20 org.python.python 0x00000001026f9d46 slot_tp_call + 230
21 wrapper.cpython-39-darwin.so 0x000000012293a2ae __pyx_pw_17OpenGL_accelerate_7wrapper_7Wrapper_3__call__ + 830
22 latebind.cpython-39-darwin.so 0x000000012299649e __pyx_pw_17OpenGL_accelerate_8latebind_8LateBind_11__call__ + 158
23 org.python.python 0x00000001026a117d _PyObject_MakeTpCall + 365
24 org.python.python 0x000000010277961c call_function + 876
25 org.python.python 0x0000000102776ab3 _PyEval_EvalFrameDefault + 25219
26 org.python.python 0x000000010277a283 _PyEval_EvalCode + 2611
27 org.python.python 0x00000001026a18d1 _PyFunction_Vectorcall + 289
28 org.python.python 0x000000010277958c call_function + 732
29 org.python.python 0x0000000102776a92 _PyEval_EvalFrameDefault + 25186
30 org.python.python 0x00000001026a1948 function_code_fastcall + 104
31 org.python.python 0x000000010277958c call_function + 732
32 org.python.python 0x0000000102776a92 _PyEval_EvalFrameDefault + 25186
33 org.python.python 0x000000010277a283 _PyEval_EvalCode + 2611
34 org.python.python 0x00000001026a18d1 _PyFunction_Vectorcall + 289
35 org.python.python 0x00000001026a398a method_vectorcall + 202
36 org.python.python 0x000000010277958c call_function + 732
37 org.python.python 0x0000000102776be1 _PyEval_EvalFrameDefault + 25521
38 org.python.python 0x00000001026a1948 function_code_fastcall + 104
39 org.python.python 0x000000010277958c call_function + 732
40 org.python.python 0x0000000102776a92 _PyEval_EvalFrameDefault + 25186
41 org.python.python 0x00000001026a1948 function_code_fastcall + 104
42 org.python.python 0x000000010277958c call_function + 732
43 org.python.python 0x0000000102776a92 _PyEval_EvalFrameDefault + 25186
44 org.python.python 0x00000001026a1948 function_code_fastcall + 104
45 org.python.python 0x000000010277958c call_function + 732
46 org.python.python 0x0000000102776b4b _PyEval_EvalFrameDefault + 25371
47 org.python.python 0x00000001026a1948 function_code_fastcall + 104
48 org.python.python 0x000000010277958c call_function + 732
49 org.python.python 0x0000000102776b4b _PyEval_EvalFrameDefault + 25371
50 org.python.python 0x00000001026a1948 function_code_fastcall + 104
51 org.python.python 0x000000010277958c call_function + 732
52 org.python.python 0x0000000102776a92 _PyEval_EvalFrameDefault + 25186
53 org.python.python 0x000000010277a283 _PyEval_EvalCode + 2611
54 org.python.python 0x00000001026a18d1 _PyFunction_Vectorcall + 289
55 org.python.python 0x000000010277958c call_function + 732
56 org.python.python 0x0000000102776a92 _PyEval_EvalFrameDefault + 25186
57 org.python.python 0x00000001026a1948 function_code_fastcall + 104
58 org.python.python 0x00000001026a398a method_vectorcall + 202
59 org.python.python 0x000000010277958c call_function + 732
60 org.python.python 0x0000000102776ab3 _PyEval_EvalFrameDefault + 25219
61 org.python.python 0x000000010277a283 _PyEval_EvalCode + 2611
62 org.python.python 0x00000001026a18d1 _PyFunction_Vectorcall + 289
63 org.python.python 0x00000001026a398a method_vectorcall + 202
64 org.python.python 0x000000010277958c call_function + 732
65 org.python.python 0x0000000102776ab3 _PyEval_EvalFrameDefault + 25219
66 org.python.python 0x00000001026a1948 function_code_fastcall + 104
67 org.python.python 0x000000010277958c call_function + 732
68 org.python.python 0x0000000102776a92 _PyEval_EvalFrameDefault + 25186
69 org.python.python 0x00000001026a1948 function_code_fastcall + 104
70 org.python.python 0x000000010277958c call_function + 732
71 org.python.python 0x0000000102776a92 _PyEval_EvalFrameDefault + 25186
72 org.python.python 0x00000001026a1948 function_code_fastcall + 104
73 org.python.python 0x000000010277958c call_function + 732
74 org.python.python 0x0000000102776a92 _PyEval_EvalFrameDefault + 25186
75 org.python.python 0x000000010277a283 _PyEval_EvalCode + 2611
76 org.python.python 0x00000001026a18d1 _PyFunction_Vectorcall + 289
77 org.python.python 0x000000010277958c call_function + 732
78 org.python.python 0x0000000102776a92 _PyEval_EvalFrameDefault + 25186
79 org.python.python 0x00000001026a1948 function_code_fastcall + 104
80 org.python.python 0x000000010277958c call_function + 732
81 org.python.python 0x0000000102776a92 _PyEval_EvalFrameDefault + 25186
82 org.python.python 0x00000001026a1948 function_code_fastcall + 104
83 org.python.python 0x00000001026a39d2 method_vectorcall + 274
84 QtCore.abi3.so 0x0000000109a49957 PyQtSlot::call(_object*, _object*) const + 39
85 QtCore.abi3.so 0x0000000109a49866 PyQtSlot::invoke(void**, _object*, void*, bool) const + 374
86 QtCore.abi3.so 0x0000000109a4a455 PyQtSlotProxy::unislot(void**) + 85
87 QtCore.abi3.so 0x0000000109a4a3ca PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**) + 58
88 QtCore 0x0000000109e2df6e void doActivate(QObject*, int, void**) + 1118
89 QtCore 0x0000000109e374c2 QTimer::timerEvent(QTimerEvent*) + 98
90 QtCore.abi3.so 0x0000000109932bf9 sipQTimer::timerEvent(QTimerEvent*) + 121
91 QtCore 0x0000000109e2585f QObject::event(QEvent*) + 111
92 QtCore.abi3.so 0x0000000109932a7a sipQTimer::event(QEvent*) + 186
93 QtWidgets 0x00000001127369ea QApplicationPrivate::notify_helper(QObject*, QEvent*) + 266
94 QtWidgets 0x0000000112737e11 QApplication::notify(QObject*, QEvent*) + 497
95 QtWidgets.abi3.so 0x00000001122e9db9 sipQApplication::notify(QObject*, QEvent*) + 233
96 QtCore 0x0000000109dfaa34 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
97 QtCore 0x0000000109e6035f QTimerInfoList::activateTimers() + 991
98 libqcocoa.dylib 0x0000000120aef8f2 QCocoaEventDispatcherPrivate::activateTimersSourceCallback(void*) + 18
99 com.apple.CoreFoundation 0x00007fff39445f92 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
100 com.apple.CoreFoundation 0x00007fff39445f31 __CFRunLoopDoSource0 + 103
101 com.apple.CoreFoundation 0x00007fff39445d4b __CFRunLoopDoSources0 + 209
102 com.apple.CoreFoundation 0x00007fff39444a7a __CFRunLoopRun + 927
103 com.apple.CoreFoundation 0x00007fff3944407e CFRunLoopRunSpecific + 462
104 com.apple.HIToolbox 0x00007fff38070aad RunCurrentEventLoopInMode + 292
105 com.apple.HIToolbox 0x00007fff380707c5 ReceiveNextEventCommon + 584
106 com.apple.HIToolbox 0x00007fff38070569 _BlockUntilNextEventMatchingListInModeWithFilter + 64
107 com.apple.AppKit 0x00007fff366b93c9 _DPSNextEvent + 883
108 com.apple.AppKit 0x00007fff366b7c10 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1352
109 com.apple.AppKit 0x00007fff366a991e -[NSApplication run] + 658
110 libqcocoa.dylib 0x0000000120af062f QCocoaEventDispatcher::processEvents(QFlags) + 2495
111 QtCore 0x0000000109df6acf QEventLoop::exec(QFlags) + 431
112 QtCore 0x0000000109dfb042 QCoreApplication::exec() + 130
113 QtWidgets.abi3.so 0x00000001123db702 meth_QApplication_exec_(_object*, _object*) + 82
114 org.python.python 0x00000001026e006d cfunction_call + 125
115 org.python.python 0x00000001026a117d _PyObject_MakeTpCall + 365
116 org.python.python 0x000000010277961c call_function + 876
117 org.python.python 0x0000000102776ab3 _PyEval_EvalFrameDefault + 25219
118 org.python.python 0x00000001026a1948 function_code_fastcall + 104
119 org.python.python 0x00000001026a398a method_vectorcall + 202
120 org.python.python 0x000000010277958c call_function + 732
121 org.python.python 0x0000000102776ab3 _PyEval_EvalFrameDefault + 25219
122 org.python.python 0x000000010277a283 _PyEval_EvalCode + 2611
123 org.python.python 0x00000001026a18d1 _PyFunction_Vectorcall + 289
124 org.python.python 0x000000010277958c call_function + 732
125 org.python.python 0x0000000102776b4b _PyEval_EvalFrameDefault + 25371
126 org.python.python 0x000000010277a283 _PyEval_EvalCode + 2611
127 org.python.python 0x000000010277070b PyEval_EvalCode + 139
128 org.python.python 0x000000010276d592 builtin_exec + 626
129 org.python.python 0x00000001026df86a cfunction_vectorcall_FASTCALL + 218
130 org.python.python 0x000000010277958c call_function + 732
131 org.python.python 0x0000000102776b4b _PyEval_EvalFrameDefault + 25371
132 org.python.python 0x000000010277a283 _PyEval_EvalCode + 2611
133 org.python.python 0x00000001026a18d1 _PyFunction_Vectorcall + 289
134 org.python.python 0x000000010277958c call_function + 732
135 org.python.python 0x0000000102776b4b _PyEval_EvalFrameDefault + 25371
136 org.python.python 0x000000010277a283 _PyEval_EvalCode + 2611
137 org.python.python 0x00000001026a18d1 _PyFunction_Vectorcall + 289
138 org.python.python 0x00000001027dfe20 pymain_run_module + 208
139 org.python.python 0x00000001027df537 Py_RunMain + 1431
140 org.python.python 0x00000001027dfb3f pymain_main + 223
141 org.python.python 0x00000001027dfa4b Py_Main + 43
142 edu.ucsf.cgl.ChimeraX 0x0000000102659dc8 main + 120
143 libdyld.dylib 0x00007fff730cacc9 start + 1
Thread 1:
0 libsystem_kernel.dylib 0x00007fff7320e872 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff732cf425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010332ea9f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 2:
0 libsystem_kernel.dylib 0x00007fff7320e872 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff732cf425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010332ea9f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 3:
0 libsystem_kernel.dylib 0x00007fff7320e872 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff732cf425 _pthread_cond_wait + 698
2 libopenblas.0.dylib 0x000000010332ea9f blas_thread_server + 207
3 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
4 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 4:: ThreadPoolServiceThread
0 libsystem_kernel.dylib 0x00007fff73214b86 kevent64 + 10
1 QtWebEngineCore 0x00000001162f5e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x00000001162f5cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000011627e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001162427cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x0000000116289a94 base::internal::ServiceThread::Run(base::RunLoop*) + 20
6 QtWebEngineCore 0x000000011629da7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 5:: ThreadPoolBackgroundWorker
0 libsystem_kernel.dylib 0x00007fff7320bdea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7320c160 mach_msg + 60
2 QtWebEngineCore 0x00000001162eb492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000116293778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x0000000116294150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x0000000116293c44 base::internal::WorkerThread::RunBackgroundPooledWorker() + 20
6 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 6:: Chrome_IOThread
0 libsystem_kernel.dylib 0x00007fff73214b86 kevent64 + 10
1 QtWebEngineCore 0x00000001162f5e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x00000001162f5cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000011627e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001162427cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000011a1c2f06 content::BrowserProcessSubThread::IOThreadRun(base::RunLoop*) + 102
6 QtWebEngineCore 0x000000011629da7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 7:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff7320bdea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7320c160 mach_msg + 60
2 QtWebEngineCore 0x00000001162eb492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001162eb2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001162131db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011627e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001162427cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011629da7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 8:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff7320bdea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7320c160 mach_msg + 60
2 QtWebEngineCore 0x00000001162eb492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000116293778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x0000000116294150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x0000000116293cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 9:: CompositorTileWorker1
0 libsystem_kernel.dylib 0x00007fff7320e872 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff732cf425 _pthread_cond_wait + 698
2 QtWebEngineCore 0x00000001162e2e18 base::ConditionVariable::Wait() + 104
3 QtWebEngineCore 0x000000011759a5f8 non-virtual thunk to cc::SingleThreadTaskGraphRunner::Run() + 56
4 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
5 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
6 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 10:: Chrome_InProcGpuThread
0 libsystem_kernel.dylib 0x00007fff7320bdea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7320c160 mach_msg + 60
2 QtWebEngineCore 0x00000001162eb492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x000000011621320f base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 223
4 QtWebEngineCore 0x000000011627e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
5 QtWebEngineCore 0x00000001162427cb base::RunLoop::Run() + 395
6 QtWebEngineCore 0x000000011629da7d base::Thread::ThreadMain() + 413
7 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 11:: Chrome_ChildIOThread
0 libsystem_kernel.dylib 0x00007fff73214b86 kevent64 + 10
1 QtWebEngineCore 0x00000001162f5e6a base::MessagePumpKqueue::DoInternalWork(base::MessagePump::Delegate::NextWorkInfo*) + 330
2 QtWebEngineCore 0x00000001162f5cc7 base::MessagePumpKqueue::Run(base::MessagePump::Delegate*) + 167
3 QtWebEngineCore 0x000000011627e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
4 QtWebEngineCore 0x00000001162427cb base::RunLoop::Run() + 395
5 QtWebEngineCore 0x000000011629da7d base::Thread::ThreadMain() + 413
6 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 12:: VizCompositorThread
0 libsystem_kernel.dylib 0x00007fff7320bdea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7320c160 mach_msg + 60
2 QtWebEngineCore 0x00000001162eb492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001162eb2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001162131db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011627e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001162427cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011629da7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 13:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff7320bdea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7320c160 mach_msg + 60
2 QtWebEngineCore 0x00000001162eb492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001162eb2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001162131db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011627e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001162427cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011629da7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 14:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff7320bdea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7320c160 mach_msg + 60
2 QtWebEngineCore 0x00000001162eb492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001162eb2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001162131db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011627e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001162427cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011629da7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 15:: ThreadPoolSingleThreadForegroundBlocking0
0 libsystem_kernel.dylib 0x00007fff7320bdea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7320c160 mach_msg + 60
2 QtWebEngineCore 0x00000001162eb492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001162eb2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011629376a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x0000000116294150 base::internal::WorkerThread::RunWorker() + 1024
6 QtWebEngineCore 0x0000000116293d34 base::internal::WorkerThread::RunDedicatedWorker() + 20
7 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 16:: MemoryInfra
0 libsystem_kernel.dylib 0x00007fff7320bdea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7320c160 mach_msg + 60
2 QtWebEngineCore 0x00000001162eb492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001162eb2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001162131db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011627e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001162427cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011629da7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 17:: NetworkConfigWatcher
0 libsystem_kernel.dylib 0x00007fff7320bdea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7320c160 mach_msg + 60
2 QtWebEngineCore 0x00000001162eb492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001162eb2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x00000001162131db base::MessagePumpDefault::Run(base::MessagePump::Delegate*) + 171
5 QtWebEngineCore 0x000000011627e62b base::sequence_manager::internal::ThreadControllerWithMessagePumpImpl::Run(bool, base::TimeDelta) + 139
6 QtWebEngineCore 0x00000001162427cb base::RunLoop::Run() + 395
7 QtWebEngineCore 0x000000011629da7d base::Thread::ThreadMain() + 413
8 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
9 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
10 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 18:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff7320bdea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7320c160 mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff39446135 __CFRunLoopServiceMachPort + 247
3 com.apple.CoreFoundation 0x00007fff39444c02 __CFRunLoopRun + 1319
4 com.apple.CoreFoundation 0x00007fff3944407e CFRunLoopRunSpecific + 462
5 com.apple.AppKit 0x00007fff3685abf4 _NSEventThread + 132
6 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 19:: ThreadPoolSingleThreadSharedBackgroundBlocking1
0 libsystem_kernel.dylib 0x00007fff7320bdea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7320c160 mach_msg + 60
2 QtWebEngineCore 0x00000001162eb492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x00000001162eb2cf base::WaitableEvent::Wait() + 31
4 QtWebEngineCore 0x000000011629376a base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 42
5 QtWebEngineCore 0x0000000116293e3d base::internal::WorkerThread::RunWorker() + 237
6 QtWebEngineCore 0x0000000116293c74 base::internal::WorkerThread::RunBackgroundSharedWorker() + 20
7 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
8 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
9 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 20:: ThreadPoolForegroundWorker
0 libsystem_kernel.dylib 0x00007fff7320bdea mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff7320c160 mach_msg + 60
2 QtWebEngineCore 0x00000001162eb492 base::WaitableEvent::TimedWait(base::TimeDelta const&) + 434
3 QtWebEngineCore 0x0000000116293778 base::internal::WorkerThread::Delegate::WaitForWork(base::WaitableEvent*) + 56
4 QtWebEngineCore 0x0000000116294150 base::internal::WorkerThread::RunWorker() + 1024
5 QtWebEngineCore 0x0000000116293cd4 base::internal::WorkerThread::RunPooledWorker() + 20
6 QtWebEngineCore 0x00000001162e6e07 base::(anonymous namespace)::ThreadFunc(void*) + 87
7 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
8 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 21:: QFileInfoGatherer
0 libsystem_kernel.dylib 0x00007fff7320e872 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff732cf425 _pthread_cond_wait + 698
2 QtCore 0x0000000109c2c75b QWaitConditionPrivate::wait(QDeadlineTimer) + 59
3 QtCore 0x0000000109c2c69d QWaitCondition::wait(QMutex*, QDeadlineTimer) + 93
4 QtWidgets 0x0000000112966c68 QFileInfoGatherer::run() + 136
5 QtCore 0x0000000109c24619 QThreadPrivate::start(void*) + 329
6 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 22:: QFileInfoGatherer
0 libsystem_kernel.dylib 0x00007fff7320e872 __psynch_cvwait + 10
1 libsystem_pthread.dylib 0x00007fff732cf425 _pthread_cond_wait + 698
2 QtCore 0x0000000109c2c75b QWaitConditionPrivate::wait(QDeadlineTimer) + 59
3 QtCore 0x0000000109c2c69d QWaitCondition::wait(QMutex*, QDeadlineTimer) + 93
4 QtWidgets 0x0000000112966c68 QFileInfoGatherer::run() + 136
5 QtCore 0x0000000109c24619 QThreadPrivate::start(void*) + 329
6 libsystem_pthread.dylib 0x00007fff732cf109 _pthread_start + 148
7 libsystem_pthread.dylib 0x00007fff732cab8b thread_start + 15
Thread 23:
0 libsystem_pthread.dylib 0x00007fff732cab68 start_wqthread + 0
Thread 24:
0 libsystem_pthread.dylib 0x00007fff732cab68 start_wqthread + 0
Thread 25:
0 libsystem_pthread.dylib 0x00007fff732cab68 start_wqthread + 0
Thread 26:
0 libsystem_pthread.dylib 0x00007fff732cab68 start_wqthread + 0
Thread 27:
0 libsystem_pthread.dylib 0x00007fff732cab68 start_wqthread + 0
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x000000010a3f2dc0 rcx: 0x00007fed300d7418 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x0000000000000006 rbp: 0x00007fed300d7440 rsp: 0x00007fed300d7418
r8: 0x00007fed300d7f48 r9: 0x022bf2232f5998ac r10: 0x000000010a3f2dc0 r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x00007fed516533c8 r14: 0x0000000000000006 r15: 0x0000000000000016
rip: 0x00007fff7321232a rfl: 0x0000000000000246 cr2: 0x00007fed300d68c0
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
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0x7fff724c9000 - 0x7fff724d6fff libxar.1.dylib (425.7) /usr/lib/libxar.1.dylib
0x7fff724dc000 - 0x7fff725beff7 libxml2.2.dylib (33.14) /usr/lib/libxml2.2.dylib
0x7fff725c2000 - 0x7fff725eafff libxslt.1.dylib (16.12) /usr/lib/libxslt.1.dylib
0x7fff725eb000 - 0x7fff725fdff3 libz.1.dylib (76.0.1) /usr/lib/libz.1.dylib
0x7fff72eac000 - 0x7fff72eb1ff3 libcache.dylib (83) /usr/lib/system/libcache.dylib
0x7fff72eb2000 - 0x7fff72ebdfff libcommonCrypto.dylib (60165.120.1) /usr/lib/system/libcommonCrypto.dylib
0x7fff72ebe000 - 0x7fff72ec5fff libcompiler_rt.dylib (101.2) /usr/lib/system/libcompiler_rt.dylib
0x7fff72ec6000 - 0x7fff72ecfff7 libcopyfile.dylib (166.40.1) /usr/lib/system/libcopyfile.dylib
0x7fff72ed0000 - 0x7fff72f62fdb libcorecrypto.dylib (866.140.2) /usr/lib/system/libcorecrypto.dylib
0x7fff7306f000 - 0x7fff730afff0 libdispatch.dylib (1173.100.2) /usr/lib/system/libdispatch.dylib
0x7fff730b0000 - 0x7fff730e6fff libdyld.dylib (750.7) /usr/lib/system/libdyld.dylib
0x7fff730e7000 - 0x7fff730e7ffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib
0x7fff730e8000 - 0x7fff730f4ff3 libkxld.dylib (6153.141.66) /usr/lib/system/libkxld.dylib
0x7fff730f5000 - 0x7fff730f5ff7 liblaunch.dylib (1738.140.3) /usr/lib/system/liblaunch.dylib
0x7fff730f6000 - 0x7fff730fbff7 libmacho.dylib (959.0.1) /usr/lib/system/libmacho.dylib
0x7fff730fc000 - 0x7fff730feff3 libquarantine.dylib (110.40.6) /usr/lib/system/libquarantine.dylib
0x7fff730ff000 - 0x7fff73100ff7 libremovefile.dylib (48) /usr/lib/system/libremovefile.dylib
0x7fff73101000 - 0x7fff73118ff3 libsystem_asl.dylib (377.60.4) /usr/lib/system/libsystem_asl.dylib
0x7fff73119000 - 0x7fff73119ff7 libsystem_blocks.dylib (74) /usr/lib/system/libsystem_blocks.dylib
0x7fff7311a000 - 0x7fff731a1fff libsystem_c.dylib (1353.100.4) /usr/lib/system/libsystem_c.dylib
0x7fff731a2000 - 0x7fff731a5ffb libsystem_configuration.dylib (1061.141.2) /usr/lib/system/libsystem_configuration.dylib
0x7fff731a6000 - 0x7fff731a9fff libsystem_coreservices.dylib (114.1) /usr/lib/system/libsystem_coreservices.dylib
0x7fff731aa000 - 0x7fff731b2fff libsystem_darwin.dylib (1353.100.4) /usr/lib/system/libsystem_darwin.dylib
0x7fff731b3000 - 0x7fff731bafff libsystem_dnssd.dylib (1096.100.3) /usr/lib/system/libsystem_dnssd.dylib
0x7fff731bb000 - 0x7fff731bcffb libsystem_featureflags.dylib (17) /usr/lib/system/libsystem_featureflags.dylib
0x7fff731bd000 - 0x7fff7320aff7 libsystem_info.dylib (538.1) /usr/lib/system/libsystem_info.dylib
0x7fff7320b000 - 0x7fff73237ff7 libsystem_kernel.dylib (6153.141.66) /usr/lib/system/libsystem_kernel.dylib
0x7fff73238000 - 0x7fff7327ffff libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib
0x7fff73280000 - 0x7fff732a7fff libsystem_malloc.dylib (283.100.6) /usr/lib/system/libsystem_malloc.dylib
0x7fff732a8000 - 0x7fff732b5ffb libsystem_networkextension.dylib (1095.140.2) /usr/lib/system/libsystem_networkextension.dylib
0x7fff732b6000 - 0x7fff732bfff7 libsystem_notify.dylib (241.100.2) /usr/lib/system/libsystem_notify.dylib
0x7fff732c0000 - 0x7fff732c8fef libsystem_platform.dylib (220.100.1) /usr/lib/system/libsystem_platform.dylib
0x7fff732c9000 - 0x7fff732d3fff libsystem_pthread.dylib (416.100.3) /usr/lib/system/libsystem_pthread.dylib
0x7fff732d4000 - 0x7fff732d8ff3 libsystem_sandbox.dylib (1217.141.9) /usr/lib/system/libsystem_sandbox.dylib
0x7fff732d9000 - 0x7fff732dbfff libsystem_secinit.dylib (62.100.2) /usr/lib/system/libsystem_secinit.dylib
0x7fff732dc000 - 0x7fff732e3ffb libsystem_symptoms.dylib (1238.120.2) /usr/lib/system/libsystem_symptoms.dylib
0x7fff732e4000 - 0x7fff732faff2 libsystem_trace.dylib (1147.120.1) /usr/lib/system/libsystem_trace.dylib
0x7fff732fc000 - 0x7fff73301ff7 libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib
0x7fff73302000 - 0x7fff73337ffe libxpc.dylib (1738.140.3) /usr/lib/system/libxpc.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 25
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 407601
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=1.0G resident=0K(0%) swapped_out_or_unallocated=1.0G(100%)
Writable regions: Total=2.1G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=2.1G(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 1024K 8
Activity Tracing 256K 1
CG backing stores 1328K 4
CG image 116K 19
CoreAnimation 408K 17
CoreGraphics 8K 1
CoreImage 32K 4
CoreUI image data 1080K 16
Foundation 24K 2
Kernel Alloc Once 8K 1
MALLOC 733.4M 156
MALLOC guard page 48K 10
MALLOC_MEDIUM (reserved) 824.0M 8 reserved VM address space (unallocated)
MALLOC_NANO (reserved) 256.0M 1 reserved VM address space (unallocated)
Mach message 24K 3
OpenGL GLSL 384K 5
STACK GUARD 108K 27
Stack 141.7M 28
Stack Guard 56.0M 1
VM_ALLOCATE 124.0M 121
VM_ALLOCATE (reserved) 32.0M 1 reserved VM address space (unallocated)
__DATA 54.4M 556
__DATA_CONST 76K 4
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 482.4M 154
__OBJC_RO 32.3M 1
__OBJC_RW 1908K 2
__TEXT 549.7M 525
__UNICODE 564K 1
mapped file 395.5M 86
shared memory 2852K 27
=========== ======= =======
TOTAL 3.6G 1792
TOTAL, minus reserved VM space 2.5G 1792
===== Log before crash start =====
UCSF ChimeraX version: 1.3rc202111192158 (2021-11-19)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open "/Users/jjpeter/MRC dundee/MRC Dundee/paper outline/University of
> Dundee/Yogesh Kulathu (Staff) - UFL1_LigaseMechanism/Raw data/Cryo-EM maps
> and models/Ligase only/Full complex/ligase_model_v1.pdb"
Summary of feedback from opening /Users/jjpeter/MRC dundee/MRC Dundee/paper
outline/University of Dundee/Yogesh Kulathu (Staff) - UFL1_LigaseMechanism/Raw
data/Cryo-EM maps and models/Ligase only/Full complex/ligase_model_v1.pdb
---
warnings | Start residue of secondary structure not found: HELIX 3 3 ARG E 79
ARG E 81 5 3
End residue of secondary structure not found: HELIX 43 43 TRP C 30 ASP C 47 1
18
Start residue of secondary structure not found: HELIX 44 44 GLU C 52 LEU C 58
1 7
End residue of secondary structure not found: HELIX 45 45 TYR C 65 GLY C 77 1
13
Start residue of secondary structure not found: HELIX 46 46 ARG C 93 TYR C 104
1 12
End residue of secondary structure not found: SHEET 3 A 4 GLU E 73 PRO E 78 1
N LEU E 74 O LYS E 7
Chain information for ligase_model_v1.pdb #1
---
Chain | Description
A | No description available
B | No description available
C | No description available
D | No description available
E | No description available
> hide atoms
> show cartoons
> open "/Users/jjpeter/MRC dundee/MRC Dundee/Manuscripts/Structure of the E3
> ligase/Figures/XL-MS/overlay of cryo_crystal.cxs" format session
opened ChimeraX session
> delete #2/C
> transparency 50 target c
> transparency 60 target c
> swt silhouettes false
Unknown command: swt silhouettes false
> set silhouettes false
> ~select
Nothing selected
> view
> select #1/D:262-267 #2/B:262-267
96 atoms, 94 bonds, 12 residues, 2 models selected
> color sel purple
> ~select
Nothing selected
> select #1/D:262-267 #2/B:262-267
96 atoms, 94 bonds, 12 residues, 2 models selected
> view sel
> ~select
Nothing selected
> ui tool show "Side View"
> hide #!2 models
> show #!2 models
> select #1/D:262-267 #2/B:262-267
96 atoms, 94 bonds, 12 residues, 2 models selected
> color sel #f07677
> ~select
Nothing selected
> transparency 70 target c
> select #1/D:262-267 #2/B:262-267
96 atoms, 94 bonds, 12 residues, 2 models selected
> select #1/D:262-267 #2/B:262-267
96 atoms, 94 bonds, 12 residues, 2 models selected
> transparency sel 0 target c
> ~select
Nothing selected
> select #2/B #1/D
1556 atoms, 1572 bonds, 201 residues, 2 models selected
> color sel #0468FF
> ~select
Nothing selected
> save "/Users/jjpeter/MRC dundee/MRC Dundee/Manuscripts/Structure of the E3
> ligase/Figures/overlay/overlay.cxs"
> save "/Users/jjpeter/MRC dundee/MRC Dundee/Manuscripts/Structure of the E3
> ligase/Figures/overlay/overlay.tif" width 3000 height 2183 supersample 3
> transparentBackground true
===== Log before crash end =====
Log:
UCSF ChimeraX version: 1.3rc202111192158 (2021-11-19)
© 2016-2021 Regents of the University of California. All rights reserved.
> open "/Users/jjpeter/MRC dundee/MRC Dundee/Manuscripts/Structure of the E3
> ligase/Figures/overlay/overlay.cxs"
Log from Thu Mar 23 04:43:14 2023UCSF ChimeraX version: 1.3rc202111192158
(2021-11-19)
© 2016-2021 Regents of the University of California. All rights reserved.
> open "/Users/jjpeter/MRC dundee/MRC Dundee/Manuscripts/Structure of the E3
> ligase/Figures/XL-MS/overlay of cryo_crystal.cxs" format session
Log from Tue Mar 14 02:32:27 2023UCSF ChimeraX version: 1.3rc202111192158
(2021-11-19)
© 2016-2021 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
> open /Users/jjpeter/Downloads/ligase_model_v1.pdb format pdb
Summary of feedback from opening /Users/jjpeter/Downloads/ligase_model_v1.pdb
---
warnings | Start residue of secondary structure not found: HELIX 3 3 ARG E 79
ARG E 81 5 3
End residue of secondary structure not found: HELIX 43 43 TRP C 30 ASP C 47 1
18
Start residue of secondary structure not found: HELIX 44 44 GLU C 52 LEU C 58
1 7
End residue of secondary structure not found: HELIX 45 45 TYR C 65 GLY C 77 1
13
Start residue of secondary structure not found: HELIX 46 46 ARG C 93 TYR C 104
1 12
End residue of secondary structure not found: SHEET 3 A 4 GLU E 73 PRO E 78 1
N LEU E 74 O LYS E 7
Chain information for ligase_model_v1.pdb #1
---
Chain | Description
A | No description available
B | No description available
C | No description available
D | No description available
E | No description available
> hide atoms
> show cartoons
> set bgColor white
> set silhouettes true
> set silhouetteWidth 1
> select #1/C:440-490,1,81-88,136, 151
427 atoms, 425 bonds, 53 residues, 1 model selected
> show sel atoms
> style sel ball
Changed 427 atom styles
> color byelement
> colour #1/E #B56800
> colour #1/D #0468FF
> colour #1/C #D23C8E
> colour #1/A #FF9300
> colour #1/B #497F3E
> view sel
> ~select
Nothing selected
> select #1/C:440-490,1,81-88,136, 151
427 atoms, 425 bonds, 53 residues, 1 model selected
> color sel byelement
> ~select
Nothing selected
> select #1/C:440-490,1,81-88,136, 151
427 atoms, 425 bonds, 53 residues, 1 model selected
> hide sel atoms
> set transparency 50
Expected a keyword
> set transparency 50 target c
Expected a keyword
> transparency 50 target c
> select #1/C:440-490,1,81-88,136, 151
427 atoms, 425 bonds, 53 residues, 1 model selected
> transparency sel 0 target c
> ~select
Nothing selected
> transparency 60 target c
> select #1/C:440-490,1,81-88,136, 151
427 atoms, 425 bonds, 53 residues, 1 model selected
> select #1/C:497,483,476,462,445,447,455
60 atoms, 53 bonds, 7 residues, 1 model selected
> show sel atoms
> style sel ball
Changed 60 atom styles
> view sel
> color byelement
> transparency sel 0 target c
> ~select
Nothing selected
> ui tool show "Side View"
> lighting soft
> save "/Users/jjpeter/MRC dundee/MRC Dundee/Manuscripts/Structure of the E3
> ligase/Figures/XL-MS/Cluster 3_transparency.tif" width 1344 height 926
> supersample 3 transparentBackground true
> turn y 90
> turn y -90
> turn x 90
> undo
> turn x 150
> save "/Users/jjpeter/MRC dundee/MRC Dundee/Manuscripts/Structure of the E3
> ligase/Figures/XL-MS/Cluster 3_transparencyx_150.tif" width 1344 height 926
> supersample 3 transparentBackground true
> transparency sel 0 target c
> transparency 0 target c
> transparency 50 target c
> select #1/C:497,483,476,462,445,447,455
60 atoms, 53 bonds, 7 residues, 1 model selected
> transparency sel 0 target c
> save "/Users/jjpeter/MRC dundee/MRC Dundee/Manuscripts/Structure of the E3
> ligase/Figures/XL-MS/Cluster 3_transparencyx_150.tif" width 1344 height 926
> supersample 3 transparentBackground true
> ~select
Nothing selected
> save "/Users/jjpeter/MRC dundee/MRC Dundee/Manuscripts/Structure of the E3
> ligase/Figures/XL-MS/Cluster 3_transparencyx_150.tif" width 1344 height 926
> supersample 3 transparentBackground true
[Repeated 1 time(s)]
> turn x -150
> save "/Users/jjpeter/MRC dundee/MRC Dundee/Manuscripts/Structure of the E3
> ligase/Figures/XL-MS/Cluster 3_transparency_x_150.tif" width 1344 height 926
> supersample 3 transparentBackground true
> open "/Users/jjpeter/Downloads/8C0D_Job123_ccp4i2 (1).pdb"
8C0D_Job123_ccp4i2 (1).pdb title:
\--- [more info...]
Chain information for 8C0D_Job123_ccp4i2 (1).pdb #2
---
Chain | Description
A | No description available
B | No description available
C | No description available
D | No description available
E | No description available
F | No description available
> view
> hide atoms
> show cartoons
> matchmaker #2 to #1
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker ligase_model_v1.pdb, chain B (#1) with 8C0D_Job123_ccp4i2 (1).pdb,
chain A (#2), sequence alignment score = 617.6
RMSD between 109 pruned atom pairs is 0.995 angstroms; (across all 133 pairs:
1.673)
> view
> delete #2/D-F
> view
> transparency 0
> transparency 0 target c
> select #2/A
1216 atoms, 1228 bonds, 1 pseudobond, 165 residues, 2 models selected
> color sel lightgreen
> ~select
Nothing selected
> color #2 #527357 transparency 0
> select #2/A
1216 atoms, 1228 bonds, 1 pseudobond, 165 residues, 2 models selected
> color sel #4cb74c
> ~select
Nothing selected
> color #2/B #0c9cf1
> color #2/B #C393C2
> color #2/C #C393C2
> ~select
Nothing selected
> lighting soft
> color #2/B #497F3E
[Repeated 1 time(s)]
> color #2/A #497F3E
> color #2/A #0468FF
> color #2/B #0468FF
> transparency #1 50 target c
> set silhouettes true
> set silhouetteWidth 2
> set silhouetteWidth 1
> set silhouetteWidth 2
> transparency #1 60 target c
> save "/Users/jjpeter/MRC dundee/MRC Dundee/Manuscripts/Structure of the E3
> ligase/Figures/XL-MS/overlay of cryo_crystal.tif" width 1344 height 926
> supersample 3 transparentBackground true
> select #2/C
1287 atoms, 1324 bonds, 164 residues, 1 model selected
> color sel #76388B
> ~select
Nothing selected
> select #1/D:118-196
389 atoms, 388 bonds, 78 residues, 1 model selected
> delete sel
> select #1/B:180-end
3809 atoms, 3868 bonds, 3 pseudobonds, 483 residues, 2 models selected
> delete sel
> save "/Users/jjpeter/MRC dundee/MRC Dundee/Manuscripts/Structure of the E3
> ligase/Figures/XL-MS/overlay of cryo_crystal_2.tif" width 1344 height 926
> supersample 3 transparentBackground true
> save "/Users/jjpeter/MRC dundee/MRC Dundee/Manuscripts/Structure of the E3
> ligase/Figures/XL-MS/overlay of cryo_crystal.cxs"
——— End of log from Tue Mar 14 02:32:27 2023 ———
opened ChimeraX session
> delete #2/C
> transparency 50 target c
> transparency 60 target c
> swt silhouettes false
Unknown command: swt silhouettes false
> set silhouettes false
> ~select
Nothing selected
> view
> select #1/D:262-267 #2/B:262-267
96 atoms, 94 bonds, 12 residues, 2 models selected
> color sel purple
> ~select
Nothing selected
> select #1/D:262-267 #2/B:262-267
96 atoms, 94 bonds, 12 residues, 2 models selected
> view sel
> ~select
Nothing selected
> ui tool show "Side View"
> hide #!2 models
> show #!2 models
> select #1/D:262-267 #2/B:262-267
96 atoms, 94 bonds, 12 residues, 2 models selected
> color sel #f07677
> ~select
Nothing selected
> transparency 70 target c
> select #1/D:262-267 #2/B:262-267
96 atoms, 94 bonds, 12 residues, 2 models selected
> select #1/D:262-267 #2/B:262-267
96 atoms, 94 bonds, 12 residues, 2 models selected
> transparency sel 0 target c
> ~select
Nothing selected
> select #2/B #1/D
1556 atoms, 1572 bonds, 201 residues, 2 models selected
> color sel #0468FF
> ~select
Nothing selected
> save "/Users/jjpeter/MRC dundee/MRC Dundee/Manuscripts/Structure of the E3
> ligase/Figures/overlay/overlay.cxs"
——— End of log from Thu Mar 23 04:43:14 2023 ———
opened ChimeraX session
OpenGL version: 4.1 INTEL-14.7.28
OpenGL renderer: Intel(R) Iris(TM) Plus Graphics OpenGL Engine
OpenGL vendor: Intel Inc.Hardware:
Hardware Overview:
Model Name: MacBook Pro
Model Identifier: MacBookPro16,2
Processor Name: Quad-Core Intel Core i7
Processor Speed: 2.3 GHz
Number of Processors: 1
Total Number of Cores: 4
L2 Cache (per Core): 512 KB
L3 Cache: 8 MB
Hyper-Threading Technology: Enabled
Memory: 32 GB
Boot ROM Version: 1916.40.8.0.0 (iBridge: 20.16.411.0.0,0)
Software:
System Software Overview:
System Version: macOS 10.15.7 (19H2026)
Kernel Version: Darwin 19.6.0
Time since boot: 1 day 13:11
Graphics/Displays:
Intel Iris Plus Graphics:
Chipset Model: Intel Iris Plus Graphics
Type: GPU
Bus: Built-In
VRAM (Dynamic, Max): 1536 MB
Vendor: Intel
Device ID: 0x8a53
Revision ID: 0x0007
Metal: Supported, feature set macOS GPUFamily2 v1
Displays:
Color LCD:
Display Type: Built-In Retina LCD
Resolution: 2560 x 1600 Retina
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: No
Connection Type: Internal
DELL U2410:
Resolution: 1920 x 1200 (WUXGA - Widescreen Ultra eXtended Graphics Array)
UI Looks like: 1920 x 1200 @ 60 Hz
Framebuffer Depth: 30-Bit Color (ARGB2101010)
Display Serial Number: F525M25VAELL
Mirror: Off
Online: Yes
Rotation: Supported
Adapter Type: Apple USB-C Digital AV Adapter
Automatically Adjust Brightness: No
Adapter Firmware Version: 2.35
Locale: (None, 'UTF-8')
PyQt5 5.15.2, Qt 5.15.2
Installed Packages:
alabaster: 0.7.12
appdirs: 1.4.4
appnope: 0.1.2
Babel: 2.9.1
backcall: 0.2.0
blockdiag: 2.0.1
certifi: 2021.5.30
cftime: 1.5.1.1
charset-normalizer: 2.0.7
ChimeraX-AddCharge: 1.2
ChimeraX-AddH: 2.1.10
ChimeraX-AlignmentAlgorithms: 2.0
ChimeraX-AlignmentHdrs: 3.2
ChimeraX-AlignmentMatrices: 2.0
ChimeraX-Alignments: 2.2.3
ChimeraX-AlphaFold: 1.0
ChimeraX-AltlocExplorer: 1.0.1
ChimeraX-AmberInfo: 1.0
ChimeraX-Arrays: 1.0
ChimeraX-Atomic: 1.30.2
ChimeraX-AtomicLibrary: 4.1.5
ChimeraX-AtomSearch: 2.0
ChimeraX-AtomSearchLibrary: 1.0
ChimeraX-AxesPlanes: 2.0
ChimeraX-BasicActions: 1.1
ChimeraX-BILD: 1.0
ChimeraX-BlastProtein: 2.0
ChimeraX-BondRot: 2.0
ChimeraX-BugReporter: 1.0
ChimeraX-BuildStructure: 2.6
ChimeraX-Bumps: 1.0
ChimeraX-BundleBuilder: 1.1
ChimeraX-ButtonPanel: 1.0
ChimeraX-CageBuilder: 1.0
ChimeraX-CellPack: 1.0
ChimeraX-Centroids: 1.2
ChimeraX-ChemGroup: 2.0
ChimeraX-Clashes: 2.2.2
ChimeraX-ColorActions: 1.0
ChimeraX-ColorGlobe: 1.0
ChimeraX-ColorKey: 1.5
ChimeraX-CommandLine: 1.1.5
ChimeraX-ConnectStructure: 2.0
ChimeraX-Contacts: 1.0
ChimeraX-Core: 1.3rc202111192158
ChimeraX-CoreFormats: 1.1
ChimeraX-coulombic: 1.3.1
ChimeraX-Crosslinks: 1.0
ChimeraX-Crystal: 1.0
ChimeraX-CrystalContacts: 1.0
ChimeraX-DataFormats: 1.2.2
ChimeraX-Dicom: 1.0
ChimeraX-DistMonitor: 1.1.5
ChimeraX-DistUI: 1.0
ChimeraX-Dssp: 2.0
ChimeraX-EMDB-SFF: 1.0
ChimeraX-ExperimentalCommands: 1.0
ChimeraX-FileHistory: 1.0
ChimeraX-FunctionKey: 1.0
ChimeraX-Geometry: 1.1
ChimeraX-gltf: 1.0
ChimeraX-Graphics: 1.1
ChimeraX-Hbonds: 2.1.2
ChimeraX-Help: 1.2
ChimeraX-HKCage: 1.3
ChimeraX-IHM: 1.1
ChimeraX-ImageFormats: 1.2
ChimeraX-IMOD: 1.0
ChimeraX-IO: 1.0.1
ChimeraX-ItemsInspection: 1.0
ChimeraX-Label: 1.1
ChimeraX-ListInfo: 1.1.1
ChimeraX-Log: 1.1.4
ChimeraX-LookingGlass: 1.1
ChimeraX-Maestro: 1.8.1
ChimeraX-Map: 1.1
ChimeraX-MapData: 2.0
ChimeraX-MapEraser: 1.0
ChimeraX-MapFilter: 2.0
ChimeraX-MapFit: 2.0
ChimeraX-MapSeries: 2.1
ChimeraX-Markers: 1.0
ChimeraX-Mask: 1.0
ChimeraX-MatchMaker: 2.0.4
ChimeraX-MDcrds: 2.6
ChimeraX-MedicalToolbar: 1.0.1
ChimeraX-Meeting: 1.0
ChimeraX-MLP: 1.1
ChimeraX-mmCIF: 2.4
ChimeraX-MMTF: 2.1
ChimeraX-Modeller: 1.2.6
ChimeraX-ModelPanel: 1.2.1
ChimeraX-ModelSeries: 1.0
ChimeraX-Mol2: 2.0
ChimeraX-Morph: 1.0
ChimeraX-MouseModes: 1.1
ChimeraX-Movie: 1.0
ChimeraX-Neuron: 1.0
ChimeraX-Nucleotides: 2.0.2
ChimeraX-OpenCommand: 1.7
ChimeraX-PDB: 2.6.5
ChimeraX-PDBBio: 1.0
ChimeraX-PDBLibrary: 1.0.2
ChimeraX-PDBMatrices: 1.0
ChimeraX-PickBlobs: 1.0
ChimeraX-Positions: 1.0
ChimeraX-PresetMgr: 1.0.1
ChimeraX-PubChem: 2.1
ChimeraX-ReadPbonds: 1.0.1
ChimeraX-Registration: 1.1
ChimeraX-RemoteControl: 1.0
ChimeraX-ResidueFit: 1.0
ChimeraX-RestServer: 1.1
ChimeraX-RNALayout: 1.0
ChimeraX-RotamerLibMgr: 2.0.1
ChimeraX-RotamerLibsDunbrack: 2.0
ChimeraX-RotamerLibsDynameomics: 2.0
ChimeraX-RotamerLibsRichardson: 2.0
ChimeraX-SaveCommand: 1.5
ChimeraX-SchemeMgr: 1.0
ChimeraX-SDF: 2.0
ChimeraX-Segger: 1.0
ChimeraX-Segment: 1.0
ChimeraX-SelInspector: 1.0
ChimeraX-SeqView: 2.4.6
ChimeraX-Shape: 1.0.1
ChimeraX-Shell: 1.0
ChimeraX-Shortcuts: 1.1
ChimeraX-ShowAttr: 1.0
ChimeraX-ShowSequences: 1.0
ChimeraX-SideView: 1.0
ChimeraX-Smiles: 2.1
ChimeraX-SmoothLines: 1.0
ChimeraX-SpaceNavigator: 1.0
ChimeraX-StdCommands: 1.6.1
ChimeraX-STL: 1.0
ChimeraX-Storm: 1.0
ChimeraX-Struts: 1.0
ChimeraX-Surface: 1.0
ChimeraX-SwapAA: 2.0
ChimeraX-SwapRes: 2.1
ChimeraX-TapeMeasure: 1.0
ChimeraX-Test: 1.0
ChimeraX-Toolbar: 1.1
ChimeraX-ToolshedUtils: 1.2
ChimeraX-Tug: 1.0
ChimeraX-UI: 1.13.7
ChimeraX-uniprot: 2.2
ChimeraX-UnitCell: 1.0
ChimeraX-ViewDockX: 1.0.1
ChimeraX-VIPERdb: 1.0
ChimeraX-Vive: 1.1
ChimeraX-VolumeMenu: 1.0
ChimeraX-VTK: 1.0
ChimeraX-WavefrontOBJ: 1.0
ChimeraX-WebCam: 1.0
ChimeraX-WebServices: 1.0
ChimeraX-Zone: 1.0
colorama: 0.4.4
cxservices: 1.1
cycler: 0.11.0
Cython: 0.29.24
decorator: 5.1.0
docutils: 0.17.1
filelock: 3.0.12
funcparserlib: 0.3.6
grako: 3.16.5
h5py: 3.6.0
html2text: 2020.1.16
idna: 3.3
ihm: 0.21
imagecodecs: 2021.4.28
imagesize: 1.3.0
ipykernel: 5.5.5
ipython: 7.23.1
ipython-genutils: 0.2.0
jedi: 0.18.0
Jinja2: 3.0.1
jupyter-client: 6.1.12
jupyter-core: 4.9.1
kiwisolver: 1.3.2
lxml: 4.6.3
lz4: 3.1.3
MarkupSafe: 2.0.1
matplotlib: 3.4.3
matplotlib-inline: 0.1.3
MolecularDynamicsViewer: 1.4
msgpack: 1.0.2
netCDF4: 1.5.7
networkx: 2.6.3
numexpr: 2.7.3
numpy: 1.21.2
openvr: 1.16.801
packaging: 21.0
ParmEd: 3.2.0
parso: 0.8.2
pexpect: 4.8.0
pickleshare: 0.7.5
Pillow: 8.3.2
pip: 21.2.4
pkginfo: 1.7.1
prompt-toolkit: 3.0.22
psutil: 5.8.0
ptyprocess: 0.7.0
pycollada: 0.7.1
pydicom: 2.1.2
Pygments: 2.10.0
PyOpenGL: 3.1.5
PyOpenGL-accelerate: 3.1.5
pyparsing: 3.0.6
PyQt5-commercial: 5.15.2
PyQt5-sip: 12.8.1
PyQtWebEngine-commercial: 5.15.2
python-dateutil: 2.8.2
pytz: 2021.3
pyzmq: 22.3.0
qtconsole: 5.1.1
QtPy: 1.11.2
RandomWords: 0.3.0
requests: 2.26.0
scipy: 1.7.1
setuptools: 57.5.0
sfftk-rw: 0.7.1
six: 1.16.0
snowballstemmer: 2.2.0
sortedcontainers: 2.4.0
Sphinx: 4.2.0
sphinx-autodoc-typehints: 1.12.0
sphinxcontrib-applehelp: 1.0.2
sphinxcontrib-blockdiag: 2.0.0
sphinxcontrib-devhelp: 1.0.2
sphinxcontrib-htmlhelp: 2.0.0
sphinxcontrib-jsmath: 1.0.1
sphinxcontrib-qthelp: 1.0.3
sphinxcontrib-serializinghtml: 1.1.5
suds-jurko: 0.6
tifffile: 2021.4.8
tinyarray: 1.2.3
tornado: 6.1
traitlets: 5.1.1
urllib3: 1.26.7
wcwidth: 0.2.5
webcolors: 1.11.1
wheel: 0.37.0
wheel-filename: 1.3.0
Change History (2)
comment:1 by , 3 years ago
| Component: | Unassigned → Graphics |
|---|---|
| Owner: | set to |
| Platform: | → all |
| Project: | → ChimeraX |
| Status: | new → assigned |
| Summary: | ChimeraX bug report submission → Graphics hardware encountered an error and was reset |
comment:2 by , 3 years ago
| Resolution: | → nonchimerax |
|---|---|
| Status: | assigned → closed |
| Summary: | Graphics hardware encountered an error and was reset → Graphics crash, macOS 10.15.7, Intel Iris Plus Graphics |
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Apple Intel graphics driver crash.