wiki:TracQuery

Trac Ticket Queries

Table of Contents

In addition to reports, Trac provides support for custom ticket queries, which can be used to display tickets that meet specified criteria.

To configure and execute a custom query, switch to the View Tickets module from the navigation bar, and select the Custom Query link.

Filters

When you first go to the query page, the default filter will display tickets relevant to you:

  • If logged in then all open tickets, it will display open tickets assigned to you.
  • If not logged in but you have specified a name or email address in the preferences, then it will display all open tickets where your email (or name if email not defined) is in the CC list.
  • If not logged in and no name/email is defined in the preferences, then all open issues are displayed.

Current filters can be removed by clicking the button to the left with the minus sign on the label. New filters are added from the pulldown lists at the bottom corners of the filters box; 'And' conditions on the left, 'Or' conditions on the right. Filters with either a text box or a pulldown menu of options can be added multiple times to perform an Or on the criteria.

You can use the fields just below the filters box to group the results based on a field, or display the full description for each ticket.

After you have edited your filters, click the Update button to refresh your results.

Some shortcuts can be used to manipulate checkbox filters.

  • Clicking on a filter row label toggles all checkboxes.
  • Pressing the modifier key while clicking on a filter row label inverts the state of all checkboxes.
  • Pressing the modifier key while clicking on a checkbox selects the checkbox and deselects all other checkboxes in the filter.

The modifier key is platform and browser dependent. On Mac the modified key is Option/Alt or Command. On Linux the modifier key is Ctrl + Alt. Opera on Windows seems to use Ctrl + Alt, while Alt is effective for other Windows browsers.

Clicking on one of the query results will take you to that ticket. You can navigate through the results by clicking the Next Ticket or Previous Ticket links just below the main menu bar, or click the Back to Query link to return to the query page.

You can safely edit any of the tickets and continue to navigate through the results using the Next/Previous/Back to Query links after saving your results. When you return to the query any tickets which were edited will be displayed with italicized text. If one of the tickets was edited such that it no longer matches the query criteria , the text will also be greyed. Lastly, if a new ticket matching the query criteria has been created, it will be shown in bold.

The query results can be refreshed and cleared of these status indicators by clicking the Update button again.

Saving Queries

Trac allows you to save the query as a named query accessible from the reports module. To save a query ensure that you have Updated the view and then click the Save query button displayed beneath the results. You can also save references to queries in Wiki content, as described below.

Note: one way to easily build queries like the ones below, you can build and test the queries in the Custom report module and when ready - click Save query. This will build the query string for you. All you need to do is remove the extra line breaks.

Note: you must have the REPORT_CREATE permission in order to save queries to the list of default reports. The Save query button will only appear if you are logged in as a user that has been granted this permission. If your account does not have permission to create reports, you can still use the methods below to save a query.

You may want to save some queries so that you can come back to them later. You can do this by making a link to the query from any Wiki page. 

[query:status=new|assigned|reopened&version=1.0 Active tickets against 1.0]

Which is displayed as:

Active tickets against 1.0

This uses a very simple query language to specify the criteria, see Query Language.

Alternatively, you can copy the query string of a query and paste that into the Wiki link, including the leading ? character: 

[query:?status=new&status=assigned&status=reopened&group=owner Assigned tickets by owner]

Which is displayed as:

Assigned tickets by owner

Customizing the table format

You can also customize the columns displayed in the table format (format=table) by using col=<field>. You can specify multiple fields and what order they are displayed in by placing pipes (|) between the columns: 

[[TicketQuery(max=3,status=closed,order=id,desc=1,format=table,col=resolution|summary|owner|reporter)]]

This is displayed as:

Results (1 - 3 of 20364)

1 2 3 4 5 6 7 8 9 10 11 →
Ticket Resolution Summary Owner Reporter
#27182 can't_reproduce Tk crash on exit pett P.gamerobegazo@…
#27181 nonchimera Stale file handle pett ks25chr2r01@…
#27180 duplicate AlphaFold3 mmCIF omits chain description pett chimera-bug-report@…
1 2 3 4 5 6 7 8 9 10 11 →

Full rows

In table format you can also have full rows by using rows=<field>: 

[[TicketQuery(max=3,status=closed,order=id,desc=1,format=table,col=resolution|summary|owner|reporter,rows=description)]]

This is displayed as:

Results (1 - 3 of 20364)

1 2 3 4 5 6 7 8 9 10 11 →
Ticket Resolution Summary Owner Reporter
#27182 can't_reproduce Tk crash on exit pett P.gamerobegazo@…
Description 
The following bug report has been submitted:
Platform:        Darwin64 (NSOPENGL) Darwin 25.6.0 x86_64
Chimera Version: 1.20_b42623
Description
(Describe the actions that caused this problem to occur here)

Reply log:




Describe the actions that led to the crash here.
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――――――――――――――――――――
OpenGL Vendor: Apple
OpenGL Renderer: Apple M5 Pro
OpenGL Version: 2.1 Metal - 90.5
Hardware:
Hardware Overview:
Model Name: Mac
Model Identifier: Mac17,9
Model Number: MGDR4CI/A
Chip: Unknown
Total Number of Cores: 15 (5 Super and 10 Performance)
Memory: 24 GB
System Firmware Version: 18000.161.9
OS Loader Version: 18000.161.9
Software:
System Software Overview:
System Version: macOS 26.6.1 (25G76)
Kernel Version: Darwin 25.6.0
Time since boot: 5 días, 2 horas y 36 minutos
Graphics/Displays:
Apple M5 Pro:
Chipset Model: Apple M5 Pro
Type: GPU
Bus: Built-In
Total Number of Cores: 16
Vendor: Apple (0x106b)
Metal Support: Metal 4
Displays:
Color LCD:
Display Type: Built-in Liquid Retina XDR Display
Resolution: 3024 x 1964 Retina
Main Display: Yes
Mirror: Off
Online: Yes
Automatically Adjust Brightness: Yes
Connection Type: Internal

――――――――――――――――――――
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Shadows: False
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――――――――――――――――――――
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#27181 nonchimera Stale file handle pett ks25chr2r01@…
Description 
The following bug report has been submitted:
Platform:        Linux64 (X11) Linux 6.12.47 x86_64
Chimera Version: 1.19_b42556
Description
.dms is file not over lying on the receptor.mol2 file

Open models
#0 1ndv_repaired_Zn.pdb
#0 MSMS main surface of 1ndv_repaired_Zn.pdb


Reply log:
The following problems occurred while reading PDB file for 1ndv_repaired_Zn.pdb
warning:  duplicate atom serial number found: 2790
Model 0 (1ndv_repaired_Zn.pdb) appears to be a protein without secondary structure assignments.
Automatically computing assignments using 'ksdssp' and parameter values:
  energy cutoff -0.5
  minimum helix length 3
  minimum strand length 3
Use command 'help ksdssp' for more information.
No SEQRES records for 1ndv_repaired_Zn.pdb (#0) chain A; guessing terminii instead
Chain-initial residues that are actual N terminii: THR 4.A
Chain-initial residues that are not actual N terminii: 
Chain-final residues that are actual C terminii: ARG 352.A
Chain-final residues that are not actual C terminii: 
314 hydrogen bonds
Hydrogens added
Charge model: AMBER ff14SB
Assigning partial charges to residue ZN (net charge +2) with am1-bcc method
Non-standard atom names:
	THR H (THR 4.A H)
Total charge for #0: -10.193
The following residues had non-integral charges:
	THR 4.A 0.8066
Correct charges are unknown for 1 non-standard atom names in otherwise standard residues

Charges of 0.0 were assigned to the unknown atoms

1 model(s) had non-integral total charge
Details in reply log

No SEQRES records for 1ndv_repaired_Zn.pdb (#0) chain A; guessing terminii instead
Chain-initial residues that are actual N terminii: THR 4.A
Chain-initial residues that are not actual N terminii: 
Chain-final residues that are actual C terminii: ARG 352.A
Chain-final residues that are not actual C terminii: 
313 hydrogen bonds
Hydrogens added
Charge model: AMBER ff14SB
Assigning partial charges to residue ZN (net charge +2) with am1-bcc method
Total charge for #0: -10.000
Charge model: AMBER ff14SB
Assigning partial charges to residue ZN (net charge +2) with am1-bcc method
Total charge for #0: -10.000
Charge model: AMBER ff14SB
Assigning partial charges to residue ZN (net charge +2) with am1-bcc method
Total charge for #0: -10.000
Model 0 (1ndv_repaired_Zn.pdb) appears to be a protein without secondary structure assignments.
Automatically computing assignments using 'ksdssp' and parameter values:
  energy cutoff -0.5
  minimum helix length 3
  minimum strand length 3
Use command 'help ksdssp' for more information.
/config/UCSF-Chimera64-1.19/bin/mscalc 1.400000 2.000000 1
MSMSLIB 1.3 started on kavyasriradham-deploy-lg2vn-69c9989dc5-bk922
Copyright M.F. Sanner (March 2000)
Compilation flags  

Surface 1ndv_repaired_Zn.pdb, category main, probe radius 1.4, vertex density 2
  35 connected surface components
  Total solvent excluded surface area = 14434.8
    component areas = 13142.6, 83.2197, 71.9857, 61.4117, 61.1745, 50.1692, 49.514, 47.8965, 45.6787, 41.666, 41.663, 40.9488, 40.2307, 37.6584, 36.8149, 36.2075, 34.6364, 34.5735, 33.217, 32.3381, 30.1325, 30.0779, 29.7909, 29.5247, 29.4416, 29.0669, 28.3467, 26.9731, 26.3191, 25.8544, 25.7286, 25.1876, 25.1393, 24.8379, 24.7931
  Total solvent accessible surface area = 14509.5
    component areas = 14463.2, 10.3045, 6.02796, 5.56074, 4.60435, 3.22228, 2.56691, 1.70442, 2.4176, 1.39423, 1.63409, 1.43962, 0.78883, 0.626033, 0.583263, 0.548821, 0.640363, 0.595221, 0.437041, 0.334414, 0.141892, 0.0878609, 0.108014, 0.11439, 0.14085, 0.0917194, 0.0997362, 0.0241567, 0.0120766, 0.00919284, 0.00679758, 0.00153126, 0.000846835, 8.31332e-05, 0.000134514
IOError Exception in Tk callback
  Function: <function command at 0x7f83d37d8488> (type: <type 'function'>)
  Module: <module 'chimera.baseDialog' from '/config/UCSF-Chimera64-1.19/share/chimera/baseDialog.py'> (line: 447)
  Args: ()
Traceback (innermost last):
  File "/config/UCSF-Chimera64-1.19/lib/python2.7/site-packages/Pmw/Pmw_1_3_3/lib/PmwBase.py", line 1747, in __call__
    return apply(self.func, args)
  File "/config/UCSF-Chimera64-1.19/share/chimera/baseDialog.py", line 449, in command
    getattr(s, buttonFuncName(txt))()
  File "/config/UCSF-Chimera64-1.19/share/chimera/baseDialog.py", line 704, in OK
    self.Apply()
  File "/config/UCSF-Chimera64-1.19/share/ReadMS/gui.py", line 53, in Apply
    generateVRML(self.fileName(), rgb=rgba[:3], sameAs=sameAs)
  File "/config/UCSF-Chimera64-1.19/share/ReadMS/genVRML.py", line 37, in generateVRML
    dms = osOpen(dmsFile)
  File "/config/UCSF-Chimera64-1.19/share/OpenSave/__init__.py", line 338, in osOpen
    return _osOpen(fileName, *args, **kw)
  File "/config/UCSF-Chimera64-1.19/share/OpenSave/__init__.py", line 384, in _osOpen
    f = open(fileName, *args)
IOError: [Errno 116] Stale file handle: '/drive/kavyasriradham/2024_pdbid1ndv/002.surface_spheres/1ndv_surface.dms'

IOError: [Errno 116] Stale file handle: '/drive/kavyasriradham/2024_pdbid1ndv/002.surface_spheres/1ndv_surface.dms'

  File "/config/UCSF-Chimera64-1.19/share/OpenSave/__init__.py", line 384, in _osOpen
    f = open(fileName, *args)

See reply log for Python traceback.


Model 0 (1ndv_repaired_Zn.pdb) appears to be a protein without secondary structure assignments.
Automatically computing assignments using 'ksdssp' and parameter values:
  energy cutoff -0.5
  minimum helix length 3
  minimum strand length 3
Use command 'help ksdssp' for more information.
IOError Exception in Tk callback
  Function: <function command at 0x7f83d42a48c0> (type: <type 'function'>)
  Module: <module 'chimera.baseDialog' from '/config/UCSF-Chimera64-1.19/share/chimera/baseDialog.py'> (line: 447)
  Args: ()
Traceback (innermost last):
  File "/config/UCSF-Chimera64-1.19/lib/python2.7/site-packages/Pmw/Pmw_1_3_3/lib/PmwBase.py", line 1747, in __call__
    return apply(self.func, args)
  File "/config/UCSF-Chimera64-1.19/share/chimera/baseDialog.py", line 449, in command
    getattr(s, buttonFuncName(txt))()
  File "/config/UCSF-Chimera64-1.19/share/chimera/baseDialog.py", line 704, in OK
    self.Apply()
  File "/config/UCSF-Chimera64-1.19/share/ReadMS/gui.py", line 53, in Apply
    generateVRML(self.fileName(), rgb=rgba[:3], sameAs=sameAs)
  File "/config/UCSF-Chimera64-1.19/share/ReadMS/genVRML.py", line 37, in generateVRML
    dms = osOpen(dmsFile)
  File "/config/UCSF-Chimera64-1.19/share/OpenSave/__init__.py", line 338, in osOpen
    return _osOpen(fileName, *args, **kw)
  File "/config/UCSF-Chimera64-1.19/share/OpenSave/__init__.py", line 384, in _osOpen
    f = open(fileName, *args)
IOError: [Errno 116] Stale file handle: '/drive/kavyasriradham/2024_pdbid1ndv/002.surface_spheres/1ndv_surface.dms'

IOError: [Errno 116] Stale file handle: '/drive/kavyasriradham/2024_pdbid1ndv/002.surface_spheres/1ndv_surface.dms'

  File "/config/UCSF-Chimera64-1.19/share/OpenSave/__init__.py", line 384, in _osOpen
    f = open(fileName, *args)

See reply log for Python traceback.


Model 0 (1ndv_repaired_Zn.pdb) appears to be a protein without secondary structure assignments.
Automatically computing assignments using 'ksdssp' and parameter values:
  energy cutoff -0.5
  minimum helix length 3
  minimum strand length 3
Use command 'help ksdssp' for more information.
/config/UCSF-Chimera64-1.19/bin/mscalc 1.400000 2.000000 1
MSMSLIB 1.3 started on kavyasriradham-deploy-lg2vn-69c9989dc5-bk922
Copyright M.F. Sanner (March 2000)
Compilation flags  

Surface 1ndv_repaired_Zn.pdb, category main, probe radius 1.4, vertex density 2
  35 connected surface components
  Total solvent excluded surface area = 14434.8
    component areas = 13142.6, 83.2197, 71.9857, 61.4117, 61.1745, 50.1692, 49.514, 47.8965, 45.6787, 41.666, 41.663, 40.9488, 40.2307, 37.6584, 36.8149, 36.2075, 34.6364, 34.5735, 33.217, 32.3381, 30.1325, 30.0779, 29.7909, 29.5247, 29.4416, 29.0669, 28.3467, 26.9731, 26.3191, 25.8544, 25.7286, 25.1876, 25.1393, 24.8379, 24.7931
  Total solvent accessible surface area = 14509.5
    component areas = 14463.2, 10.3045, 6.02796, 5.56074, 4.60435, 3.22228, 2.56691, 1.70442, 2.4176, 1.39423, 1.63409, 1.43962, 0.78883, 0.626033, 0.583263, 0.548821, 0.640363, 0.595221, 0.437041, 0.334414, 0.141892, 0.0878609, 0.108014, 0.11439, 0.14085, 0.0917194, 0.0997362, 0.0241567, 0.0120766, 0.00919284, 0.00679758, 0.00153126, 0.000846835, 8.31332e-05, 0.000134514
IOError Exception in Tk callback
  Function: <function command at 0x7f83d433aa28> (type: <type 'function'>)
  Module: <module 'chimera.baseDialog' from '/config/UCSF-Chimera64-1.19/share/chimera/baseDialog.py'> (line: 447)
  Args: ()
Traceback (innermost last):
  File "/config/UCSF-Chimera64-1.19/lib/python2.7/site-packages/Pmw/Pmw_1_3_3/lib/PmwBase.py", line 1747, in __call__
    return apply(self.func, args)
  File "/config/UCSF-Chimera64-1.19/share/chimera/baseDialog.py", line 449, in command
    getattr(s, buttonFuncName(txt))()
  File "/config/UCSF-Chimera64-1.19/share/chimera/baseDialog.py", line 704, in OK
    self.Apply()
  File "/config/UCSF-Chimera64-1.19/share/ReadMS/gui.py", line 53, in Apply
    generateVRML(self.fileName(), rgb=rgba[:3], sameAs=sameAs)
  File "/config/UCSF-Chimera64-1.19/share/ReadMS/genVRML.py", line 37, in generateVRML
    dms = osOpen(dmsFile)
  File "/config/UCSF-Chimera64-1.19/share/OpenSave/__init__.py", line 338, in osOpen
    return _osOpen(fileName, *args, **kw)
  File "/config/UCSF-Chimera64-1.19/share/OpenSave/__init__.py", line 384, in _osOpen
    f = open(fileName, *args)
IOError: [Errno 116] Stale file handle: '/drive/kavyasriradham/2024_pdbid1ndv/002.surface_spheres/1ndv_surface.dms'

IOError: [Errno 116] Stale file handle: '/drive/kavyasriradham/2024_pdbid1ndv/002.surface_spheres/1ndv_surface.dms'

  File "/config/UCSF-Chimera64-1.19/share/OpenSave/__init__.py", line 384, in _osOpen
    f = open(fileName, *args)

See reply log for Python traceback.






IOError Exception in Tk callback
Function:<function command at 0x7f83d433aa28> (type:<type 'function'>)
Module:<module 'chimera.baseDialog' from '/config/UCSF-Chimera64-1.19/share/chimera/baseDialog.py'> (line: 447)
Args: ()
Traceback (innermost last):
File "/config/UCSF-Chimera64-1.19/lib/python2.7/site-packages/Pmw/Pmw_1_3_3/lib/PmwBase.py", line 1747, in __call__
return apply(self.func, args)
File "/config/UCSF-Chimera64-1.19/share/chimera/baseDialog.py", line 449, in command
getattr(s, buttonFuncName(txt))()
File "/config/UCSF-Chimera64-1.19/share/chimera/baseDialog.py", line 704, in OK
self.Apply()
File "/config/UCSF-Chimera64-1.19/share/ReadMS/gui.py", line 53, in Apply
generateVRML(self.fileName(), rgb=rgba[:3], sameAs=sameAs)
File "/config/UCSF-Chimera64-1.19/share/ReadMS/genVRML.py", line 37, in generateVRML
dms = osOpen(dmsFile)
File "/config/UCSF-Chimera64-1.19/share/OpenSave/__init__.py", line 338, in osOpen
return _osOpen(fileName, *args, **kw)
File "/config/UCSF-Chimera64-1.19/share/OpenSave/__init__.py", line 384, in _osOpen
f = open(fileName, *args)
IOError: [Errno 116] Stale file handle: '/drive/kavyasriradham/2024_pdbid1ndv/002.surface_spheres/1ndv_surface.dms'

――――――――――――――――――――
OpenGL Vendor: Mesa
OpenGL Renderer: llvmpipe (LLVM 20.1.2, 256 bits)
OpenGL Version: 4.5 (Compatibility Profile) Mesa 25.0.7-0ubuntu0.24.04.2
/etc/debian_version:
trixie/sid
/etc/os-release:
PRETTY_NAME="Ubuntu 24.04.3 LTS"
NAME="Ubuntu"
VERSION_ID="24.04"
VERSION="24.04.3 LTS (Noble Numbat)"
VERSION_CODENAME=noble
ID=ubuntu
ID_LIKE=debian
HOME_URL="https://www.ubuntu.com/"
SUPPORT_URL="https://help.ubuntu.com/"
BUG_REPORT_URL="https://bugs.launchpad.net/ubuntu/"
PRIVACY_POLICY_URL="https://www.ubuntu.com/legal/terms-and-policies/privacy-policy"
UBUNTU_CODENAME=noble
LOGO=ubuntu-logo
/etc/lsb-release:
DISTRIB_ID=Ubuntu
DISTRIB_RELEASE=24.04
DISTRIB_CODENAME=noble
DISTRIB_DESCRIPTION="Ubuntu 24.04.3 LTS"
/proc/cpuinfo:
cpu: 10 GenuineIntel Intel(R) Xeon(R) Gold 6248R CPU @ 3.00GHz (x86_64)
cpu MHz: 2992.946
cache: 36608 KB
/proc/meminfo:
MemTotal: 30744356 kB
Graphics:

――――――――――――――――――――
Multisampling: False
Shadows: False
Shadow texture size: 2048
Silhouettes: False
Depth cue: True
Subdivision quality: 1.50
Single-layer transparency: True
Transparent background: False
Shaders supported: False
Using shader: False
Window size: 1920 823
Camera mode: mono
Orthographic projection: False
Center of rotation: front center
Near/far clipping: False
Key light: True
Fill light: True
Back light: False
Ambient light: 0.20
Specular sharpness: 30.00
Specular reflectivity: 1.00

――――――――――――――――――――
AntialiasLines: native
AntialiasPoints: native
BlendEquation: native
BlendFuncSeparate: native
BrokenAttribLocation: native, disabled
ChoosePixelFormat: not supported
ColorTable: not supported
CompileAndExecute: native
CompiledVertexArray: extension
CubeMap: native
CullVertex: not supported
DrawElementsInstanced: native, disabled
DrawRangeElements: native
FBConfig: native
FBOShadows: native
FastMultisampling: native, disabled
FramebufferMultisample: native
FramebufferObject: native
LimitVertexAttribDivisor: native, disabled
Multisample: native
Multitexture: native
PackedDepthStencil: native
PalettedTexture: not supported
PointParameters: native
SeamlessCubeMap: native
SeparateSpecularColor: native
Shading: native, disabled
Shadows: native
StereoMultisample: native
StereoRubberBanding: native
Texture3D: native
TextureColorTable: not supported
TextureEdgeClamp: native
TrustColorLogicBlend: native
TrustNormals: native
VertexArray: native
VertexAttrib: native
VertexAttribDivisor: native
VertexBufferObject: native
WindowPos: not supported
#27180 duplicate AlphaFold3 mmCIF omits chain description pett chimera-bug-report@…
Description 
The following bug report has been submitted:
Platform:        Windows64 (WGL) Microsoft Windows Unknown 10.0 (Build 19045) x64
Chimera Version: 1.17.3_b42480
Description
(Describe the actions that caused this problem to occur here)

Open models
#0 fold_2026_02_07_13_19_human_model_1.cif


Reply log:
[MMLIB:WARNING] read_struct_conn: struct_conn table not found
Traceback (most recent call last):
  File "C:\Program Files\Chimera 1.17.3\share\chimera\triggerSet.py", line 83, in invoke
    self._funcData, triggerData)
  File "C:\Program Files\Chimera 1.17.3\share\chimera\__init__.py", line 2664, in categorizeSurface
    processNewMolecules(prefModels)
  File "C:\Program Files\Chimera 1.17.3\share\chimera\__init__.py", line 2637, in processNewMolecules
    preset(openedModels=smartMols)
  File "C:\Program Files\Chimera 1.17.3\share\chimera\preset.py", line 271, in preset
    for seq in m.sequences():
  File "C:\Program Files\Chimera 1.17.3\share\chimera\Sequence.py", line 993, in getSequences
    description = entity[index]['pdbx_description']
KeyError: 'pdbx_description'
Error processing trigger "Bond":
KeyError: 'pdbx_description'

  File "C:\Program Files\Chimera 1.17.3\share\chimera\Sequence.py", line 993, in getSequences
    description = entity[index]['pdbx_description']

See reply log for Python traceback.


Model 0 (fold_2026_02_07_13_19_human_model_1.cif) appears to be a protein without secondary structure assignments.
Automatically computing assignments using 'ksdssp' and parameter values:
  energy cutoff -0.5
  minimum helix length 3
  minimum strand length 3
Use command 'help ksdssp' for more information.




Traceback (most recent call last):
File "C:\Program Files\Chimera 1.17.3\share\chimera\triggerSet.py", line 83, in invoke
self._funcData, triggerData)
File "C:\Program Files\Chimera 1.17.3\share\chimera\__init__.py", line 2664, in categorizeSurface
processNewMolecules(prefModels)
File "C:\Program Files\Chimera 1.17.3\share\chimera\__init__.py", line 2637, in processNewMolecules
preset(openedModels=smartMols)
File "C:\Program Files\Chimera 1.17.3\share\chimera\preset.py", line 271, in preset
for seq in m.sequences():
File "C:\Program Files\Chimera 1.17.3\share\chimera\Sequence.py", line 993, in getSequences
description = entity[index]['pdbx_description']
KeyError: 'pdbx_description'

――――――――――――――――――――
OpenGL Vendor: Intel
OpenGL Renderer: Intel(R) HD Graphics
OpenGL Version: 2.1.0 - Build 8.15.10.2900
Manufacturer: Acer
Model: Aspire 5742G
TotalPhysicalMemory: 3949678592

――――――――――――――――――――
Multisampling: False
Shadows: False
Shadow texture size: 2048
Silhouettes: False
Depth cue: True
Subdivision quality: 1.50
Single-layer transparency: True
Transparent background: False
Shaders supported: True
Using shader: True
Window size: 1366 663
Camera mode: mono
Orthographic projection: False
Center of rotation: front center
Near/far clipping: False
Key light: True
Fill light: True
Back light: False
Ambient light: 0.20
Specular sharpness: 30.00
Specular reflectivity: 1.00

――――――――――――――――――――
AntialiasLines: native
AntialiasPoints: native
BlendEquation: native
BlendFuncSeparate: native
BrokenAttribLocation: native, disabled
ChoosePixelFormat: extension
ColorTable: not supported
CompileAndExecute: native
CompiledVertexArray: extension
CubeMap: native
CullVertex: not supported
DrawElementsInstanced: not supported, disabled
DrawRangeElements: native
FBConfig: not supported
FBOShadows: native
FastMultisampling: native, disabled
FramebufferMultisample: native
FramebufferObject: native
LimitVertexAttribDivisor: native, disabled
Multisample: native
Multitexture: native
PackedDepthStencil: native
PalettedTexture: not supported
PointParameters: native
SeamlessCubeMap: extension
SeparateSpecularColor: native
Shading: native
Shadows: native
StereoMultisample: native
StereoRubberBanding: native
Texture3D: native
TextureColorTable: not supported
TextureEdgeClamp: native
TrustColorLogicBlend: native
TrustNormals: native
VertexArray: native
VertexAttrib: native
VertexAttribDivisor: not supported
VertexBufferObject: native
WindowPos: not supported
1 2 3 4 5 6 7 8 9 10 11 →

Query Language

query: TracLinks and the [[TicketQuery]] macro both use a mini “query language” for specifying query filters. Filters are separated by ampersands (&). Each filter consists of the ticket field name, an operator and one or more values. More than one value are separated by a pipe (|), meaning that the filter matches any of the values. To include a literal & or | in a value, escape the character with a backslash (\).

The available operators are:

= the field content exactly matches one of the values
~= the field content contains one or more of the values
^= the field content starts with one of the values
$= the field content ends with one of the values

All of these operators can also be negated:

!= the field content matches none of the values
!~= the field content does not contain any of the values
!^= the field content does not start with any of the values
!$= the field content does not end with any of the values

The date fields created and modified can be constrained by using the = operator and specifying a value containing two dates separated by two dots (..). Either end of the date range can be left empty, meaning that the corresponding end of the range is open. The date parser understands a few natural date specifications like "3 weeks ago", "last month" and "now", as well as Bugzilla-style date specifications like "1d", "2w", "3m" or "4y" for 1 day, 2 weeks, 3 months and 4 years, respectively. Spaces in date specifications can be omitted to avoid having to quote the query string.

created=2007-01-01..2008-01-01 query tickets created in 2007
created=lastmonth..thismonth query tickets created during the previous month
modified=1weekago.. query tickets that have been modified in the last week
modified=..30daysago query tickets that have been inactive for the last 30 days

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