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Featured Citations

Oxygen metabolism in descendants of the archaeal-eukaryotic ancestor. Appler KE, Lingford JP et al. Nature. 2026 Apr 9;652(8109):405–415.

CLCC1 governs ER bilayer equilibration to maintain lipid homeostasis. Wu L, Wang J et al. Nature. 2026 Apr 9;652(8109):471–480.

Luminal surface proteome of the brain vasculature uncovers blood-brain barrier regulators. Zhu Z, Jiang Z et al. Science. 2026 Apr 9;392(6794):eaea2100.

Harnessing viral strategies to reverse cognitive dysfunction through the integrated stress response. Reineke LC, Zhu PJ et al. Science. 2026 Apr 2;392(6793):eaea8782.

DefensePredictor: A machine learning model to discover prokaryotic immune systems. DeWeirdt PC, Mahoney EM, Laub MT. Science. 2026 Apr 2;392(6793):eadv7924.

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News

December 25, 2025

computer generated image
The RBVI wishes you a safe and happy holiday season! See our 2025 card and the gallery of previous cards back to 1985.

December 16, 2025

The ChimeraX 1.11 production release is available! See the change log for what's new.

November 21, 2025

The ChimeraX 1.11 release candidate is available – please try it and report any issues. See the change log for what's new. This will be the last release to support Red Hat Enterprise Linux 8 and its derivatives.

Previous news...

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UCSF ChimeraX

UCSF ChimeraX (or simply ChimeraX) is the next-generation molecular visualization program from the Resource for Biocomputing, Visualization, and Informatics (RBVI), following UCSF Chimera. ChimeraX can be downloaded free of charge for academic, government, nonprofit, and personal use. Commercial users, please see ChimeraX commercial licensing.

ChimeraX is developed with support from National Institutes of Health R01-GM129325.

Bluesky logo ChimeraX on Bluesky: @chimerax.ucsf.edu

Feature Highlight

GPCR conservation coloring tube helices

Coloring by Sequence Conservation

Atomic structures, including cartoons and molecular surfaces, can be colored by the conservation in an associated multiple sequence alignment. The figure shows a structure of the β2-adrenergic receptor signaling complex (PDB 3sn6) with receptor cartoon colored blue→white→red from least conserved to most conserved. The β2-adrenergic receptor is a member of the class A G-protein-coupled receptor superfamily. Conservation was calculated from a superfamily alignment from PASS2 using the entropy-based measure from AL2CO (included with ChimeraX courtesy of Pei and Grishin). The sequence alignment and step-by-step instructions for making this image are given in the Coloring by Sequence Conservation tutorial.

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Example Image

2015 holiday card with ribosome image

The Human Ribosome

The architecture of the human ribosome has been determined at near-atomic resolution by electron microscopy (Anger et al., Nature 497:80 (2013)). The structure, comprising 82 proteins and five RNA molecules, is shown with shadows cast from all directions to accentuate depth. In the background are schematic representations of contacts between the component molecules.

See the image setup script card.cxc using the 'Tis the Season color palette (credit to MrsP). See also the RBVI holiday card gallery.

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